AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0099160

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0099160 MtrunA17_Chr1g0151221 83.462 520 22 4 1 459 1 517 0.0 854
Msa0099160 MtrunA17_Chr3g0135841 69.320 515 90 6 9 459 15 525 0.0 702
Msa0099160 MtrunA17_Chr1g0174451 25.325 462 259 17 41 440 38 475 7.28e-30 121
Msa0099160 MtrunA17_Chr1g0174441 24.390 451 280 12 41 440 56 496 1.39e-29 121
Msa0099160 MtrunA17_Chr1g0174481 24.781 456 279 14 38 444 33 473 5.31e-29 119
Msa0099160 MtrunA17_Chr5g0403321 26.947 475 272 17 41 457 36 493 5.17e-28 116
Msa0099160 MtrunA17_Chr1g0174461 22.838 451 284 10 41 440 37 474 2.14e-27 114
Msa0099160 MtrunA17_Chr8g0390881 24.174 484 302 16 7 440 3 471 6.62e-27 113
Msa0099160 MtrunA17_Chr5g0403351 25.322 466 286 14 41 454 36 491 8.48e-27 112
Msa0099160 MtrunA17_Chr3g0116741 24.043 470 297 18 36 458 48 504 1.30e-26 112
Msa0099160 MtrunA17_Chr1g0174471 25.000 468 278 17 40 452 51 500 2.42e-26 111
Msa0099160 MtrunA17_Chr4g0058281 22.561 492 294 14 9 440 16 480 8.08e-26 110
Msa0099160 MtrunA17_Chr5g0395381 24.773 440 270 16 41 452 44 450 9.41e-26 109
Msa0099160 MtrunA17_Chr1g0156101 23.176 466 287 14 41 447 34 487 2.15e-25 108
Msa0099160 MtrunA17_Chr6g0451681 26.087 460 277 16 2 445 32 444 2.40e-25 108
Msa0099160 MtrunA17_Chr5g0395331 24.892 462 279 16 41 452 39 482 2.63e-25 108
Msa0099160 MtrunA17_Chr5g0395321 23.913 460 278 17 41 450 44 481 2.76e-25 108
Msa0099160 MtrunA17_Chr4g0058191 23.111 450 271 13 43 439 29 456 5.07e-25 107
Msa0099160 MtrunA17_Chr5g0445441 23.878 490 285 15 11 440 47 508 7.05e-25 107
Msa0099160 MtrunA17_Chr8g0364081 27.027 333 204 12 126 439 200 512 7.28e-25 107
Msa0099160 MtrunA17_Chr3g0116681 23.874 444 289 13 41 448 42 472 7.94e-25 107
Msa0099160 MtrunA17_Chr4g0030701 22.796 465 283 14 41 446 37 484 9.23e-25 107
Msa0099160 MtrunA17_Chr5g0446161 25.000 436 280 12 41 440 43 467 1.05e-24 106
Msa0099160 MtrunA17_Chr8g0362701 23.767 446 290 15 50 452 46 484 1.77e-24 105
Msa0099160 MtrunA17_Chr6g0458561 36.313 179 105 4 274 450 329 500 1.86e-24 106
Msa0099160 MtrunA17_Chr5g0430031 25.676 444 281 16 38 440 36 471 6.07e-24 104
Msa0099160 MtrunA17_Chr2g0308651 27.193 342 209 13 119 442 70 389 8.29e-24 103
Msa0099160 MtrunA17_Chr1g0205361 25.355 493 306 19 13 457 6 484 1.39e-23 103
Msa0099160 MtrunA17_Chr4g0057001 25.311 482 296 22 26 457 33 500 1.98e-23 102
Msa0099160 MtrunA17_Chr4g0052881 23.251 486 293 11 29 458 18 479 2.05e-23 102
Msa0099160 MtrunA17_Chr5g0403331 24.464 466 293 15 7 426 5 457 2.57e-23 102
Msa0099160 MtrunA17_Chr4g0046681 35.928 167 102 4 274 437 32 196 3.78e-23 97.8
Msa0099160 MtrunA17_Chr1g0160851 25.386 453 273 17 33 439 30 463 4.81e-23 101
Msa0099160 MtrunA17_Chr5g0445461 23.772 509 297 21 11 454 6 488 9.00e-23 100
Msa0099160 MtrunA17_Chr8g0339331 32.420 219 133 5 240 450 276 487 9.25e-23 100
Msa0099160 MtrunA17_Chr4g0058231 21.643 499 323 14 12 458 4 486 1.17e-22 100
Msa0099160 MtrunA17_Chr5g0445421 24.672 458 300 15 11 440 80 520 1.25e-22 100
Msa0099160 MtrunA17_Chr6g0484811 23.922 464 288 14 41 451 39 490 1.38e-22 100
Msa0099160 MtrunA17_Chr8g0339311 28.992 238 151 5 210 437 259 488 1.64e-22 100
Msa0099160 MtrunA17_Chr8g0344191 26.087 230 162 3 225 447 284 512 1.66e-22 100
Msa0099160 MtrunA17_Chr5g0446151 24.009 454 263 13 41 440 43 468 4.06e-22 99.0
Msa0099160 MtrunA17_Chr5g0401691 24.609 447 268 12 41 440 53 477 4.29e-22 99.0
Msa0099160 MtrunA17_Chr7g0258221 21.458 480 322 12 1 440 9 473 4.41e-22 99.0
Msa0099160 MtrunA17_Chr4g0039901 22.418 455 273 10 41 440 37 466 5.45e-22 98.6
Msa0099160 MtrunA17_Chr1g0164211 25.926 432 275 15 36 430 28 451 6.57e-22 98.2
Msa0099160 MtrunA17_Chr4g0058261 21.667 480 265 15 39 446 62 502 8.51e-22 98.2
Msa0099160 MtrunA17_Chr3g0084921 22.126 461 307 13 41 454 37 492 1.58e-21 97.1
Msa0099160 MtrunA17_Chr6g0472311 22.200 509 308 14 15 451 10 502 1.85e-21 97.1
Msa0099160 MtrunA17_Chr8g0344181 26.275 255 171 6 200 447 236 480 3.29e-21 96.3
Msa0099160 MtrunA17_Chr4g0058201 22.993 461 273 12 41 448 30 461 3.64e-21 95.9
Msa0099160 MtrunA17_Chr7g0246221 23.871 465 296 13 41 457 36 490 3.90e-21 95.9
Msa0099160 MtrunA17_Chr5g0431511 24.374 439 275 10 41 433 35 462 4.55e-21 95.9
Msa0099160 MtrunA17_Chr3g0101581 25.957 470 293 19 18 440 8 469 5.03e-21 95.5
Msa0099160 MtrunA17_Chr4g0052861 30.233 215 137 6 232 441 255 461 6.16e-21 95.5
Msa0099160 MtrunA17_Chr1g0197891 24.838 463 305 14 18 446 15 468 8.76e-21 94.7
Msa0099160 MtrunA17_Chr4g0024771 22.822 482 292 17 12 440 13 467 9.38e-21 94.7
Msa0099160 MtrunA17_Chr1g0205371 23.878 490 318 17 14 457 5 485 9.73e-21 94.7
Msa0099160 MtrunA17_Chr8g0390871 33.523 176 113 4 266 439 19 192 1.13e-20 90.5
Msa0099160 MtrunA17_Chr4g0047691 24.091 440 283 15 41 440 54 482 1.35e-20 94.4
Msa0099160 MtrunA17_Chr2g0334021 24.941 421 273 14 36 418 32 447 1.39e-20 94.4
Msa0099160 MtrunA17_Chr5g0445381 23.094 459 263 13 41 440 71 498 1.59e-20 94.4
Msa0099160 MtrunA17_Chr0c19g0493771 25.526 333 229 9 131 458 318 636 1.99e-20 94.4
Msa0099160 MtrunA17_Chr8g0362481 26.524 328 204 12 140 452 110 415 2.22e-20 93.2
Msa0099160 MtrunA17_Chr6g0451811 34.078 179 108 5 273 448 4 175 2.53e-20 89.4
Msa0099160 MtrunA17_Chr1g0162811 22.748 444 284 13 41 440 39 467 2.59e-20 93.6
Msa0099160 MtrunA17_Chr8g0356001 22.912 467 294 13 41 457 43 493 3.02e-20 93.2
Msa0099160 MtrunA17_Chr4g0061381 22.198 464 296 14 48 458 40 491 3.08e-20 93.2
Msa0099160 MtrunA17_Chr8g0344151 26.957 230 152 5 232 447 258 485 3.19e-20 93.2
Msa0099160 MtrunA17_Chr3g0128461 27.490 251 156 9 227 457 275 519 3.33e-20 93.2
Msa0099160 MtrunA17_Chr1g0174431 29.891 184 116 3 276 447 4 186 4.54e-20 88.6
Msa0099160 MtrunA17_Chr3g0094231 23.707 464 292 16 41 457 38 486 4.70e-20 92.8
Msa0099160 MtrunA17_Chr7g0255531 27.273 220 148 5 230 439 245 462 4.93e-20 92.8
Msa0099160 MtrunA17_Chr1g0198191 25.055 455 267 16 41 439 47 483 5.67e-20 92.4
Msa0099160 MtrunA17_Chr4g0046351 21.461 438 273 13 37 418 29 451 6.02e-20 92.4
Msa0099160 MtrunA17_Chr3g0101631 24.601 439 279 16 41 440 38 463 6.49e-20 92.0
Msa0099160 MtrunA17_Chr8g0336361 24.370 476 260 21 68 459 96 555 6.52e-20 92.4
Msa0099160 MtrunA17_Chr1g0197851 23.840 474 318 13 7 446 4 468 6.97e-20 92.0
Msa0099160 MtrunA17_Chr4g0053621 32.738 168 105 3 274 440 304 464 7.35e-20 92.0
Msa0099160 MtrunA17_Chr3g0086651 30.400 250 148 8 220 455 241 478 8.11e-20 92.0
Msa0099160 MtrunA17_Chr3g0086661 30.800 250 147 8 220 455 241 478 9.04e-20 92.0
Msa0099160 MtrunA17_Chr3g0101571 23.767 446 277 13 41 440 38 466 1.62e-19 90.9
Msa0099160 MtrunA17_Chr1g0207841 22.018 436 264 13 50 426 49 467 1.68e-19 91.3
Msa0099160 MtrunA17_Chr4g0035921 27.706 231 161 6 225 452 264 491 1.88e-19 90.9
Msa0099160 MtrunA17_Chr5g0431641 22.785 474 310 14 8 440 9 467 2.29e-19 90.5
Msa0099160 MtrunA17_Chr4g0046321 22.902 441 263 16 37 418 29 451 2.86e-19 90.5
Msa0099160 MtrunA17_Chr1g0197881 23.667 469 316 14 13 446 6 467 3.07e-19 90.1
Msa0099160 MtrunA17_Chr4g0011881 25.268 467 269 19 41 456 32 469 3.23e-19 90.1
Msa0099160 MtrunA17_Chr5g0431671 22.614 482 273 17 41 454 40 489 3.85e-19 89.7
Msa0099160 MtrunA17_Chr1g0197871 23.651 482 301 17 13 446 6 468 3.86e-19 89.7
Msa0099160 MtrunA17_Chr4g0046661 34.320 169 106 4 274 439 26 192 4.61e-19 86.3
Msa0099160 MtrunA17_Chr6g0451641 28.400 250 153 8 224 455 257 498 5.09e-19 89.7
Msa0099160 MtrunA17_Chr1g0156081 22.081 471 296 14 41 452 58 516 7.88e-19 89.0
Msa0099160 MtrunA17_Chr5g0430101 24.330 448 290 15 38 448 35 470 8.69e-19 89.0
Msa0099160 MtrunA17_Chr4g0039391 30.435 207 130 6 227 422 248 451 8.96e-19 89.0
Msa0099160 MtrunA17_Chr3g0101621 27.273 209 145 4 235 440 254 458 9.27e-19 88.6
Msa0099160 MtrunA17_Chr1g0193811 21.678 429 272 12 63 446 85 494 1.08e-18 88.6
Msa0099160 MtrunA17_Chr3g0101721 24.222 450 271 17 42 440 40 470 1.11e-18 88.6
Msa0099160 MtrunA17_Chr5g0401681 31.646 158 100 3 274 430 300 450 1.17e-18 88.6
Msa0099160 MtrunA17_Chr6g0466901 30.000 230 145 6 228 447 263 486 1.20e-18 88.6
Msa0099160 MtrunA17_Chr6g0451751 33.520 179 108 5 274 449 325 495 1.26e-18 88.6
Msa0099160 MtrunA17_Chr4g0004601 24.828 435 273 17 67 459 106 528 1.33e-18 88.2
Msa0099160 MtrunA17_Chr6g0463791 23.937 447 276 14 41 440 37 466 1.42e-18 88.2
Msa0099160 MtrunA17_Chr2g0314731 27.731 238 144 9 232 450 249 477 1.42e-18 88.2
Msa0099160 MtrunA17_Chr4g0046331 20.682 440 276 12 37 418 29 453 1.47e-18 88.2
Msa0099160 MtrunA17_Chr5g0419451 27.273 231 146 6 238 449 283 510 2.15e-18 87.8
Msa0099160 MtrunA17_Chr4g0047631 22.907 454 271 14 41 440 51 479 2.26e-18 87.4
Msa0099160 MtrunA17_Chr6g0451771 32.544 169 111 3 276 442 25 192 2.40e-18 84.0
Msa0099160 MtrunA17_Chr2g0313831 27.306 271 168 10 197 442 224 490 2.49e-18 87.4
Msa0099160 MtrunA17_Chr4g0011941 30.857 175 118 3 274 447 2 174 2.51e-18 83.2
Msa0099160 MtrunA17_Chr4g0030711 21.622 444 258 13 50 426 48 468 2.53e-18 87.4
Msa0099160 MtrunA17_Chr5g0443731 27.228 202 125 5 249 440 256 445 2.87e-18 87.0
Msa0099160 MtrunA17_Chr1g0156061 24.009 429 272 11 41 452 57 448 3.63e-18 86.7
Msa0099160 MtrunA17_Chr5g0445531 23.810 483 264 21 41 454 40 487 3.77e-18 87.0
Msa0099160 MtrunA17_Chr7g0215181 28.061 196 129 5 249 439 292 480 4.50e-18 86.7
Msa0099160 MtrunA17_Chr3g0101601 29.834 181 125 2 268 447 292 471 4.78e-18 86.7
Msa0099160 MtrunA17_Chr3g0086691 26.180 233 158 5 220 439 241 472 4.95e-18 86.7
Msa0099160 MtrunA17_Chr2g0313821 24.723 271 175 10 197 442 224 490 5.40e-18 86.3
Msa0099160 MtrunA17_Chr6g0465511 23.714 447 280 15 41 440 36 468 6.20e-18 86.3
Msa0099160 MtrunA17_Chr8g0361471 23.714 447 280 15 41 440 36 468 7.16e-18 85.9
Msa0099160 MtrunA17_Chr5g0446101 27.966 236 159 6 205 433 42 273 8.09e-18 84.0
Msa0099160 MtrunA17_Chr5g0431501 23.043 460 279 15 41 448 35 471 8.39e-18 85.9
Msa0099160 MtrunA17_Chr5g0431461 23.043 460 279 15 41 448 35 471 8.39e-18 85.9
Msa0099160 MtrunA17_Chr8g0377341 23.214 504 327 20 2 459 23 512 8.75e-18 85.9
Msa0099160 MtrunA17_Chr3g0089351 29.278 263 151 9 194 439 123 367 9.24e-18 85.1
Msa0099160 MtrunA17_Chr2g0313761 27.083 240 154 8 220 442 250 485 9.38e-18 85.5
Msa0099160 MtrunA17_Chr4g0063221 30.357 168 114 3 274 440 326 491 1.20e-17 85.5
Msa0099160 MtrunA17_Chr6g0466331 23.894 452 273 16 41 440 36 468 1.29e-17 85.1
Msa0099160 MtrunA17_Chr4g0011921 33.333 147 95 3 295 440 319 463 1.34e-17 85.1
Msa0099160 MtrunA17_Chr8g0346261 25.714 210 151 3 235 439 304 513 1.52e-17 85.1
Msa0099160 MtrunA17_Chr3g0101691 22.737 453 277 16 41 440 40 472 1.82e-17 84.7
Msa0099160 MtrunA17_Chr5g0446131 26.894 264 169 9 196 442 232 488 1.86e-17 84.7
Msa0099160 MtrunA17_Chr8g0351801 21.888 233 159 4 246 456 277 508 1.90e-17 84.7
Msa0099160 MtrunA17_Chr8g0355961 23.340 467 292 13 41 457 43 493 2.22e-17 84.3
Msa0099160 MtrunA17_Chr4g0058211 29.940 167 114 3 274 439 20 184 2.24e-17 80.9
Msa0099160 MtrunA17_Chr6g0479681 21.991 432 272 15 63 442 85 503 2.25e-17 84.7
Msa0099160 MtrunA17_Chr2g0310391 23.899 477 303 22 17 445 1 465 2.29e-17 84.3
Msa0099160 MtrunA17_Chr6g0451781 28.099 242 153 7 221 448 293 527 2.30e-17 84.7
Msa0099160 MtrunA17_Chr5g0443401 28.099 242 135 9 212 432 218 441 2.32e-17 84.3
Msa0099160 MtrunA17_Chr3g0101711 22.601 469 258 19 41 440 39 471 2.36e-17 84.3
Msa0099160 MtrunA17_Chr6g0457421 23.671 414 261 13 63 439 83 478 2.56e-17 84.3
Msa0099160 MtrunA17_Chr3g0101671 23.973 438 270 16 41 430 40 462 2.58e-17 84.3
Msa0099160 MtrunA17_Chr3g0101591 32.164 171 113 3 271 440 37 205 3.09e-17 80.9
Msa0099160 MtrunA17_Chr2g0293411 22.270 467 302 14 12 437 11 457 3.10e-17 84.0
Msa0099160 MtrunA17_Chr6g0466941 28.163 245 155 6 218 450 265 500 3.12e-17 84.0
Msa0099160 MtrunA17_Chr7g0265611 29.864 221 133 7 235 439 269 483 3.42e-17 84.0
Msa0099160 MtrunA17_Chr8g0369791 29.183 257 147 10 213 454 213 449 3.66e-17 83.6
Msa0099160 MtrunA17_Chr7g0218611 22.126 461 282 13 42 447 36 474 3.95e-17 83.6
Msa0099160 MtrunA17_Chr5g0445451 27.273 231 156 5 220 440 239 467 4.88e-17 83.6
Msa0099160 MtrunA17_Chr6g0451741 32.768 177 108 5 276 449 349 517 5.36e-17 83.6
Msa0099160 MtrunA17_Chr4g0052851 29.310 174 115 3 274 446 291 457 6.81e-17 82.8
Msa0099160 MtrunA17_Chr3g0086681 34.266 143 85 5 324 458 15 156 6.91e-17 78.6
Msa0099160 MtrunA17_Chr1g0203151 22.038 422 268 14 63 442 83 485 7.06e-17 82.8
Msa0099160 MtrunA17_Chr7g0246131 22.129 479 288 14 41 457 36 491 7.78e-17 82.8
Msa0099160 MtrunA17_Chr1g0154731 25.221 226 140 5 237 439 255 474 8.16e-17 82.8
Msa0099160 MtrunA17_Chr6g0472221 21.719 442 247 14 63 442 96 500 9.00e-17 82.8
Msa0099160 MtrunA17_Chr5g0400411 23.556 450 254 15 41 437 47 459 1.13e-16 82.4
Msa0099160 MtrunA17_Chr4g0056951 20.957 439 292 15 63 457 68 495 1.21e-16 82.4
Msa0099160 MtrunA17_Chr1g0203141 22.512 422 266 17 63 442 87 489 1.58e-16 82.0
Msa0099160 MtrunA17_Chr4g0046631 29.333 225 144 6 226 437 262 484 2.09e-16 81.6
Msa0099160 MtrunA17_Chr2g0313801 25.552 317 192 11 142 442 202 490 2.20e-16 81.6
Msa0099160 MtrunA17_Chr2g0313751 25.368 272 172 10 197 442 251 517 2.36e-16 81.6
Msa0099160 MtrunA17_Chr8g0382901 22.637 455 307 18 41 457 494 941 2.37e-16 82.0
Msa0099160 MtrunA17_Chr2g0307301 27.083 240 154 9 220 442 257 492 2.99e-16 80.9
Msa0099160 MtrunA17_Chr4g0044851 24.766 428 269 13 41 439 39 442 3.27e-16 80.9
Msa0099160 MtrunA17_Chr3g0101731 22.122 443 288 14 42 440 39 468 3.34e-16 80.9
Msa0099160 MtrunA17_Chr8g0354531 25.101 247 164 8 213 442 377 619 3.36e-16 81.3
Msa0099160 MtrunA17_Chr2g0307291 27.197 239 152 9 218 442 262 492 3.42e-16 80.9
Msa0099160 MtrunA17_Chr5g0431591 25.806 248 168 7 205 440 42 285 3.64e-16 79.3
Msa0099160 MtrunA17_Chr7g0246151 20.909 440 282 10 50 439 45 468 3.95e-16 80.5
Msa0099160 MtrunA17_Chr2g0296651 32.278 158 99 3 274 430 300 450 4.29e-16 80.5
Msa0099160 MtrunA17_Chr8g0381571 24.160 476 303 18 1 437 3 459 4.79e-16 80.1
Msa0099160 MtrunA17_Chr7g0235551 23.790 248 164 6 224 447 242 488 5.72e-16 80.1
Msa0099160 MtrunA17_Chr5g0405001 32.609 138 90 3 323 459 363 498 5.84e-16 80.1
Msa0099160 MtrunA17_Chr2g0310381 26.257 179 129 3 268 445 289 465 6.47e-16 80.1
Msa0099160 MtrunA17_Chr3g0117301 35.294 119 71 3 327 440 3 120 6.51e-16 73.9
Msa0099160 MtrunA17_Chr8g0381541 24.160 476 303 18 1 437 3 459 6.67e-16 79.7
Msa0099160 MtrunA17_Chr6g0451691 32.000 175 110 4 276 448 331 498 6.69e-16 80.1
Msa0099160 MtrunA17_Chr4g0008101 27.500 240 153 6 224 449 263 495 6.70e-16 80.1
Msa0099160 MtrunA17_Chr5g0400421 25.231 432 270 16 41 437 47 460 6.71e-16 79.7
Msa0099160 MtrunA17_Chr2g0313781 24.900 249 162 8 213 442 260 502 7.16e-16 80.1
Msa0099160 MtrunA17_Chr1g0200951 26.027 219 149 8 249 458 300 514 9.62e-16 79.3
Msa0099160 MtrunA17_Chr2g0313771 25.312 320 188 13 142 442 210 497 9.63e-16 79.3
Msa0099160 MtrunA17_Chr5g0402981 28.994 169 112 5 284 445 3 170 1.02e-15 75.5
Msa0099160 MtrunA17_Chr5g0408181 24.541 436 255 14 41 439 37 435 1.02e-15 79.3
Msa0099160 MtrunA17_Chr4g0011961 25.316 237 151 7 226 440 230 462 1.12e-15 79.3
Msa0099160 MtrunA17_Chr4g0046701 37.719 114 67 3 327 437 12 124 1.23e-15 74.7
Msa0099160 MtrunA17_Chr1g0213671 24.726 457 292 17 41 452 36 485 1.23e-15 79.3
Msa0099160 MtrunA17_Chr5g0396521 29.688 192 105 5 274 437 349 538 1.25e-15 79.3
Msa0099160 MtrunA17_Chr7g0258211 24.046 262 177 6 210 456 245 499 1.29e-15 79.0
Msa0099160 MtrunA17_Chr3g0082701 28.807 243 144 9 226 447 260 494 1.32e-15 79.0
Msa0099160 MtrunA17_Chr2g0304871 26.038 265 177 9 200 455 244 498 1.43e-15 79.0
Msa0099160 MtrunA17_Chr8g0372251 27.922 154 108 3 268 420 301 452 1.64e-15 78.6
Msa0099160 MtrunA17_Chr6g0484841 32.402 179 103 8 274 448 309 473 1.74e-15 78.6
Msa0099160 MtrunA17_Chr2g0310351 28.655 171 114 5 274 440 1 167 2.06e-15 74.7
Msa0099160 MtrunA17_Chr2g0293421 23.874 444 267 16 41 441 47 462 2.25e-15 78.2
Msa0099160 MtrunA17_Chr4g0028321 31.405 121 82 1 339 459 23 142 2.29e-15 73.6
Msa0099160 MtrunA17_Chr4g0020041 21.861 462 268 15 41 440 39 469 2.32e-15 78.2
Msa0099160 MtrunA17_Chr3g0101801 22.777 461 303 15 41 457 44 495 2.55e-15 78.2
Msa0099160 MtrunA17_Chr4g0011851 29.670 182 119 4 268 448 11 184 2.55e-15 74.7
Msa0099160 MtrunA17_Chr2g0313791 24.390 246 167 7 213 442 243 485 2.70e-15 78.2
Msa0099160 MtrunA17_Chr3g0101821 23.340 467 293 16 41 457 37 488 3.09e-15 77.8
Msa0099160 MtrunA17_Chr7g0262111 27.715 267 165 10 190 439 221 476 3.41e-15 77.8
Msa0099160 MtrunA17_Chr6g0455461 21.749 446 309 11 16 439 10 437 3.76e-15 77.4
Msa0099160 MtrunA17_Chr3g0101651 22.667 450 281 15 41 440 40 472 5.03e-15 77.4
Msa0099160 MtrunA17_Chr2g0313811 23.125 320 196 11 142 442 214 502 5.61e-15 77.0
Msa0099160 MtrunA17_Chr7g0224561 23.645 203 143 3 248 439 267 468 5.85e-15 77.0
Msa0099160 MtrunA17_Chr3g0089361 26.168 428 267 17 41 439 42 449 5.97e-15 77.0
Msa0099160 MtrunA17_Chr3g0078411 22.148 447 306 12 16 439 10 437 6.38e-15 76.6
Msa0099160 MtrunA17_Chr4g0076161 26.531 245 166 6 220 452 239 481 7.14e-15 76.6
Msa0099160 MtrunA17_Chr7g0218601 26.016 246 162 6 202 447 248 473 1.22e-14 75.9
Msa0099160 MtrunA17_Chr4g0047661 21.460 452 286 13 41 440 50 484 1.27e-14 75.9
Msa0099160 MtrunA17_Chr4g0011981 28.736 174 121 3 268 440 292 463 1.36e-14 75.9
Msa0099160 MtrunA17_Chr1g0204271 26.941 219 140 6 253 458 283 494 1.93e-14 75.5
Msa0099160 MtrunA17_Chr1g0160861 27.193 228 147 8 226 439 82 304 1.98e-14 74.3
Msa0099160 MtrunA17_Chr7g0224551 23.153 203 144 3 248 439 267 468 1.98e-14 75.5
Msa0099160 MtrunA17_Chr3g0094171 23.009 452 270 18 41 434 42 473 2.22e-14 75.1
Msa0099160 MtrunA17_Chr6g0463801 23.462 439 270 12 41 433 39 457 2.29e-14 75.1
Msa0099160 MtrunA17_Chr8g0351461 25.770 357 197 18 120 440 156 480 2.48e-14 75.1
Msa0099160 MtrunA17_Chr1g0200961 22.081 471 301 14 39 457 28 484 2.51e-14 75.1
Msa0099160 MtrunA17_Chr2g0280071 22.907 454 284 13 41 440 65 506 2.62e-14 75.5
Msa0099160 MtrunA17_Chr6g0449331 29.500 200 125 8 252 438 289 485 2.75e-14 75.1
Msa0099160 MtrunA17_Chr8g0372411 24.427 262 166 7 198 439 203 452 3.59e-14 74.3
Msa0099160 MtrunA17_Chr7g0246181 23.983 467 274 18 50 457 45 489 3.81e-14 74.3
Msa0099160 MtrunA17_Chr3g0101811 31.447 159 106 3 276 433 320 476 4.12e-14 74.3
Msa0099160 MtrunA17_Chr4g0047641 25.620 242 154 6 232 449 260 499 4.60e-14 74.3
Msa0099160 MtrunA17_Chr5g0406651 28.740 254 144 9 226 456 231 470 5.05e-14 73.9
Msa0099160 MtrunA17_Chr8g0354511 23.666 431 264 17 59 442 86 498 5.11e-14 73.9
Msa0099160 MtrunA17_Chr6g0463621 30.409 171 114 4 274 440 1 170 5.52e-14 70.9
Msa0099160 MtrunA17_Chr3g0101751 23.198 444 285 15 41 440 44 475 5.67e-14 73.9
Msa0099160 MtrunA17_Chr8g0380931 26.316 209 136 6 235 432 268 469 6.48e-14 73.9
Msa0099160 MtrunA17_Chr2g0288661 25.101 247 164 8 213 442 250 492 7.17e-14 73.6
Msa0099160 MtrunA17_Chr4g0017411 29.213 178 110 4 274 446 288 454 7.54e-14 73.6
Msa0099160 MtrunA17_Chr6g0449381 26.667 240 157 9 234 457 256 492 9.99e-14 73.2
Msa0099160 MtrunA17_Chr4g0011901 28.302 212 138 6 233 443 266 464 1.02e-13 73.2
Msa0099160 MtrunA17_Chr7g0226771 28.352 261 162 9 213 459 218 467 1.02e-13 73.2
Msa0099160 MtrunA17_Chr5g0430071 30.055 183 118 5 268 448 152 326 1.10e-13 72.4
Msa0099160 MtrunA17_Chr8g0372711 27.966 236 152 7 213 439 230 456 1.11e-13 73.2
Msa0099160 MtrunA17_Chr6g0449361 28.452 239 152 10 234 457 256 490 1.14e-13 73.2
Msa0099160 MtrunA17_Chr5g0419691 33.121 157 92 5 295 448 319 465 1.27e-13 72.8
Msa0099160 MtrunA17_Chr6g0472171 28.369 141 91 4 326 457 14 153 1.33e-13 68.6
Msa0099160 MtrunA17_Chr5g0430081 28.736 174 120 4 268 439 297 468 1.37e-13 72.8
Msa0099160 MtrunA17_Chr1g0182861 29.167 120 75 3 328 442 23 137 1.42e-13 68.6
Msa0099160 MtrunA17_Chr1g0184461 26.804 194 130 5 267 454 299 486 1.48e-13 72.8
Msa0099160 MtrunA17_Chr5g0430091 30.055 183 118 5 268 448 299 473 1.50e-13 72.8
Msa0099160 MtrunA17_Chr5g0445371 34.646 127 79 3 315 440 74 197 1.50e-13 70.5
Msa0099160 MtrunA17_Chr8g0354571 25.498 251 175 8 194 442 258 498 1.62e-13 72.4
Msa0099160 MtrunA17_Chr5g0430131 29.891 184 117 6 268 448 298 472 1.66e-13 72.4
Msa0099160 MtrunA17_Chr8g0362731 28.090 178 108 5 274 442 216 382 2.91e-13 71.2
Msa0099160 MtrunA17_Chr3g0101611 31.319 182 113 6 276 452 307 481 3.34e-13 71.6
Msa0099160 MtrunA17_Chr1g0153371 26.939 245 142 9 212 437 213 439 4.60e-13 70.9
Msa0099160 MtrunA17_Chr5g0397971 21.330 436 283 13 41 440 33 444 4.65e-13 70.9
Msa0099160 MtrunA17_Chr1g0176831 22.422 446 284 15 41 440 65 494 5.00e-13 70.9
Msa0099160 MtrunA17_Chr8g0388921 27.642 246 161 7 213 447 218 457 5.17e-13 70.9
Msa0099160 MtrunA17_Chr5g0430041 34.884 129 78 5 314 439 16 141 8.19e-13 66.6
Msa0099160 MtrunA17_Chr2g0280011 28.333 180 123 4 267 440 2 181 8.29e-13 67.4
Msa0099160 MtrunA17_Chr2g0280061 28.333 180 123 4 267 440 2 181 8.37e-13 67.4
Msa0099160 MtrunA17_Chr1g0163391 31.737 167 98 8 274 429 302 463 8.46e-13 70.1
Msa0099160 MtrunA17_Chr1g0163371 29.143 175 107 6 274 437 23 191 8.74e-13 67.8
Msa0099160 MtrunA17_Chr7g0254641 22.766 470 286 20 41 453 39 488 1.01e-12 70.1
Msa0099160 MtrunA17_Chr1g0163211 31.844 179 100 6 267 437 306 470 1.10e-12 70.1
Msa0099160 MtrunA17_Chr4g0004481 30.994 171 109 5 274 437 293 461 1.21e-12 69.7
Msa0099160 MtrunA17_Chr5g0404861 33.058 121 78 2 324 444 21 138 1.31e-12 65.9
Msa0099160 MtrunA17_Chr2g0280081 27.225 191 131 4 258 440 784 974 1.39e-12 70.1
Msa0099160 MtrunA17_Chr2g0280081 28.415 183 123 4 265 440 292 473 2.22e-11 66.2
Msa0099160 MtrunA17_Chr4g0011871 31.847 157 94 5 295 448 320 466 1.53e-12 69.3
Msa0099160 MtrunA17_Chr7g0246121 27.879 165 116 3 276 439 304 466 1.61e-12 69.3
Msa0099160 MtrunA17_Chr5g0445351 34.783 115 73 2 327 440 77 190 1.84e-12 66.6
Msa0099160 MtrunA17_Chr7g0227291 32.353 170 108 4 274 437 295 463 1.91e-12 69.3
Msa0099160 MtrunA17_Chr2g0280121 27.604 192 127 5 259 440 290 479 2.02e-12 68.9
Msa0099160 MtrunA17_Chr1g0167321 22.616 451 279 15 41 440 36 467 2.20e-12 68.9
Msa0099160 MtrunA17_Chr3g0101761 22.993 461 312 16 17 440 14 468 2.22e-12 68.9
Msa0099160 MtrunA17_Chr8g0387101 30.000 190 118 6 262 440 290 475 2.51e-12 68.9
Msa0099160 MtrunA17_Chr6g0449351 29.775 178 113 6 269 438 260 433 2.72e-12 68.6
Msa0099160 MtrunA17_Chr3g0116731 34.259 108 65 2 327 433 3 105 3.21e-12 63.9
Msa0099160 MtrunA17_Chr8g0351401 26.923 208 117 8 259 440 283 481 3.82e-12 68.2
Msa0099160 MtrunA17_Chr8g0364651 26.601 203 140 5 265 459 288 489 4.46e-12 68.2
Msa0099160 MtrunA17_Chr4g0067191 24.928 345 206 12 131 439 159 486 4.90e-12 67.8
Msa0099160 MtrunA17_Chr1g0163351 25.738 237 154 6 220 437 241 474 4.91e-12 67.8
Msa0099160 MtrunA17_Chr8g0357431 23.060 464 295 18 42 457 40 489 4.92e-12 67.8
Msa0099160 MtrunA17_Chr2g0296661 30.380 158 102 4 274 430 305 455 5.18e-12 67.8
Msa0099160 MtrunA17_Chr8g0354541 27.273 154 106 5 291 442 3 152 5.25e-12 64.3
Msa0099160 MtrunA17_Chr8g0357421 21.589 491 319 18 17 457 14 488 6.12e-12 67.4
Msa0099160 MtrunA17_Chr2g0280261 23.690 439 269 13 41 433 36 454 9.23e-12 67.0
Msa0099160 MtrunA17_Chr1g0163421 28.824 170 114 5 274 437 341 509 1.17e-11 66.6
Msa0099160 MtrunA17_Chr8g0351311 23.476 328 193 13 149 447 190 488 1.72e-11 66.2
Msa0099160 MtrunA17_Chr3g0107511 26.642 274 165 11 195 449 202 458 1.74e-11 66.2
Msa0099160 MtrunA17_Chr3g0101831 25.806 248 155 9 232 457 249 489 2.37e-11 65.9
Msa0099160 MtrunA17_Chr1g0162801 21.475 461 272 15 41 440 39 470 2.57e-11 65.5
Msa0099160 MtrunA17_Chr8g0381561 31.481 108 69 1 330 437 8 110 2.60e-11 60.8
Msa0099160 MtrunA17_Chr7g0248991 24.715 263 185 6 131 391 100 351 3.83e-11 64.7
Msa0099160 MtrunA17_Chr7g0219961 20.177 451 314 12 18 439 3 436 4.96e-11 64.7
Msa0099160 MtrunA17_Chr5g0403451 26.496 234 137 7 235 439 23 250 5.95e-11 63.2
Msa0099160 MtrunA17_Chr4g0026941 23.919 347 218 15 111 440 193 510 7.56e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0099160 AT2G26170.1 61.616 495 113 6 26 459 32 510 0.0 598
Msa0099160 AT2G26170.2 60.449 445 95 7 78 459 1 427 0.0 516
Msa0099160 AT5G25140.1 26.609 466 275 15 41 456 31 479 4.76e-27 114
Msa0099160 AT4G13310.1 24.681 470 274 14 41 456 34 477 2.86e-26 111
Msa0099160 AT5G25120.1 25.417 480 263 18 41 456 31 479 9.06e-26 110
Msa0099160 AT4G37430.1 24.454 458 293 11 17 430 4 452 9.50e-26 110
Msa0099160 AT2G45550.1 24.948 477 278 16 41 458 40 495 1.20e-25 109
Msa0099160 AT3G26300.1 23.632 457 273 12 38 440 30 464 2.80e-25 108
Msa0099160 AT5G24900.2 28.195 266 154 8 218 457 151 405 1.13e-24 105
Msa0099160 AT2G45560.1 23.909 481 278 15 41 458 40 495 1.54e-24 106
Msa0099160 AT5G24900.1 28.195 266 154 8 218 457 268 522 2.47e-24 106
Msa0099160 AT5G25130.1 26.427 473 267 17 41 456 31 479 2.52e-24 105
Msa0099160 AT5G57260.1 22.747 466 272 13 37 440 28 467 9.37e-24 104
Msa0099160 AT4G13290.1 24.353 464 275 14 41 456 35 470 2.07e-23 103
Msa0099160 AT5G25180.1 24.790 476 271 17 41 456 31 479 3.14e-23 102
Msa0099160 AT5G24950.1 23.230 452 273 13 41 440 34 463 3.78e-23 102
Msa0099160 AT5G25900.1 23.866 419 273 12 40 418 44 456 8.11e-23 101
Msa0099160 AT5G06900.1 21.978 455 290 14 41 447 36 473 1.13e-22 100
Msa0099160 AT1G33720.1 24.681 470 270 16 41 447 40 488 3.06e-22 99.8
Msa0099160 AT4G37320.1 24.667 450 272 15 38 439 27 457 3.13e-22 99.8
Msa0099160 AT3G48270.1 22.222 459 280 16 36 444 28 459 3.68e-22 99.4
Msa0099160 AT2G46960.2 25.231 432 270 15 51 439 66 487 5.35e-22 99.0
Msa0099160 AT4G27710.1 23.753 421 242 11 69 437 93 486 5.73e-22 99.0
Msa0099160 AT1G74550.1 29.577 213 139 6 245 448 253 463 9.15e-22 98.2
Msa0099160 AT3G48280.1 21.429 476 316 12 1 440 2 455 1.07e-21 97.8
Msa0099160 AT5G24910.1 22.581 558 286 21 10 457 6 527 1.07e-21 98.2
Msa0099160 AT4G37370.1 25.268 467 271 19 14 430 9 447 1.57e-21 97.4
Msa0099160 AT5G67310.1 27.160 243 159 6 226 457 251 486 1.72e-21 97.4
Msa0099160 AT2G46950.1 24.257 404 273 10 69 444 148 546 4.67e-21 96.3
Msa0099160 AT5G44620.1 22.619 504 306 17 15 459 22 500 5.17e-21 96.3
Msa0099160 AT5G10600.1 22.547 479 322 14 1 439 6 475 6.19e-21 95.9
Msa0099160 AT2G46960.1 26.349 315 180 10 141 439 93 371 8.68e-21 94.4
Msa0099160 AT4G37400.1 23.235 439 272 11 48 440 40 459 9.36e-21 95.1
Msa0099160 AT1G13110.1 24.123 456 267 18 35 433 30 463 1.13e-20 95.1
Msa0099160 AT3G28740.1 30.942 223 137 7 226 439 251 465 1.32e-20 94.7
Msa0099160 AT3G53280.1 25.000 464 258 18 41 443 30 464 1.67e-20 94.4
Msa0099160 AT2G40890.1 29.146 199 136 4 244 439 265 461 1.76e-20 94.4
Msa0099160 AT4G31970.1 22.833 473 295 16 40 451 32 495 2.12e-20 94.4
Msa0099160 AT4G37340.1 27.803 223 145 6 226 439 242 457 2.79e-20 94.0
Msa0099160 AT3G26330.1 21.610 472 285 13 38 447 30 478 3.53e-20 93.6
Msa0099160 AT4G13770.1 24.490 490 285 20 12 440 1 466 4.01e-20 93.2
Msa0099160 AT1G31800.1 25.397 315 217 8 131 440 239 540 4.51e-20 93.6
Msa0099160 AT3G26310.1 23.093 472 302 16 22 458 39 484 4.86e-20 93.2
Msa0099160 AT3G53300.1 23.714 447 287 14 41 443 30 466 5.48e-20 92.8
Msa0099160 AT4G15330.1 22.271 458 289 15 13 418 8 450 5.81e-20 92.8
Msa0099160 AT5G09970.1 22.814 469 281 18 40 451 70 514 8.78e-20 92.4
Msa0099160 AT1G74540.1 27.404 208 144 5 235 439 251 454 1.18e-19 92.0
Msa0099160 AT2G14100.1 30.570 193 123 5 272 458 308 495 1.22e-19 92.0
Msa0099160 AT5G36220.2 27.848 237 156 6 222 455 107 331 1.61e-19 90.1
Msa0099160 AT2G45570.1 22.222 468 289 13 48 458 47 496 2.52e-19 90.9
Msa0099160 AT3G48300.1 21.868 471 292 13 36 457 26 469 2.70e-19 90.5
Msa0099160 AT3G48300.2 21.868 471 292 13 36 457 28 471 2.72e-19 90.5
Msa0099160 AT1G13080.1 23.160 462 271 15 41 443 33 469 2.96e-19 90.5
Msa0099160 AT5G36220.1 27.848 237 156 6 222 455 253 477 3.49e-19 90.5
Msa0099160 AT3G48310.1 21.528 432 294 14 43 440 36 456 4.30e-19 90.1
Msa0099160 AT2G30750.1 24.222 450 270 16 41 440 35 463 8.26e-19 89.4
Msa0099160 AT5G04630.1 21.429 448 292 12 41 439 40 476 8.62e-19 89.4
Msa0099160 AT4G12310.1 26.357 258 166 7 220 459 250 501 8.85e-19 89.4
Msa0099160 AT5G35715.1 27.642 246 162 8 209 443 164 404 9.37e-19 89.0
Msa0099160 AT2G26710.1 30.198 202 133 6 241 439 290 486 1.10e-18 89.0
Msa0099160 AT2G45580.1 22.917 432 261 10 63 440 62 475 1.10e-18 89.0
Msa0099160 AT1G01190.2 24.803 254 170 5 215 448 261 513 1.10e-18 89.0
Msa0099160 AT1G01190.1 24.803 254 170 5 215 448 256 508 1.33e-18 89.0
Msa0099160 AT4G37360.1 24.101 473 282 16 17 439 12 457 1.47e-18 88.6
Msa0099160 AT4G37410.1 23.516 455 292 11 41 454 32 471 1.62e-18 88.6
Msa0099160 AT2G30770.1 23.649 444 280 15 41 440 35 463 1.72e-18 88.2
Msa0099160 AT3G48320.1 22.274 431 292 12 43 440 36 456 1.77e-18 88.2
Msa0099160 AT5G10610.1 23.394 436 287 14 41 439 34 459 1.85e-18 88.2
Msa0099160 AT4G31940.1 30.769 182 118 6 274 451 319 496 1.93e-18 88.2
Msa0099160 AT1G66540.2 27.679 224 144 5 226 439 70 285 2.25e-18 86.3
Msa0099160 AT3G20140.1 22.090 421 273 13 41 418 44 452 2.25e-18 88.2
Msa0099160 AT4G31950.1 22.747 466 293 18 40 451 32 484 3.90e-18 87.4
Msa0099160 AT3G26270.1 30.047 213 140 6 228 433 252 462 4.46e-18 87.0
Msa0099160 AT1G66540.1 27.679 224 144 5 226 439 129 344 4.83e-18 86.3
Msa0099160 AT4G15360.1 22.628 411 282 10 43 418 44 453 4.88e-18 87.0
Msa0099160 AT4G15300.3 26.360 239 147 7 213 435 205 430 5.18e-18 86.7
Msa0099160 AT4G15300.2 26.360 239 147 7 213 435 215 440 5.51e-18 86.7
Msa0099160 AT4G15393.2 26.877 253 167 8 214 457 215 458 6.15e-18 86.3
Msa0099160 AT3G26230.1 27.039 233 150 7 232 447 249 478 6.34e-18 86.7
Msa0099160 AT3G26320.1 21.957 460 314 13 38 458 30 483 6.61e-18 86.7
Msa0099160 AT5G07990.1 26.199 271 167 8 216 458 225 490 6.96e-18 86.7
Msa0099160 AT3G14630.1 28.079 203 136 6 247 442 283 482 7.23e-18 86.3
Msa0099160 AT1G33730.1 30.698 215 130 7 239 443 134 339 7.49e-18 85.5
Msa0099160 AT1G33730.2 30.698 215 130 7 239 443 134 339 7.49e-18 85.5
Msa0099160 AT3G14630.2 28.079 203 136 6 247 442 338 537 9.05e-18 86.3
Msa0099160 AT5G04330.1 23.045 243 169 4 214 439 229 470 1.14e-17 85.9
Msa0099160 AT3G14610.1 25.379 264 177 8 197 442 225 486 1.22e-17 85.9
Msa0099160 AT1G50520.1 32.911 158 101 3 268 421 306 462 1.29e-17 85.9
Msa0099160 AT3G26200.1 24.000 450 282 16 41 443 30 466 1.36e-17 85.5
Msa0099160 AT1G50560.1 27.586 203 139 3 256 451 295 496 1.43e-17 85.5
Msa0099160 AT3G14660.2 25.373 268 171 10 197 442 80 340 2.00e-17 84.0
Msa0099160 AT4G15300.1 28.495 186 115 4 259 435 276 452 2.16e-17 84.7
Msa0099160 AT2G45580.2 32.090 134 83 2 307 440 196 321 2.39e-17 84.0
Msa0099160 AT4G15310.1 28.959 221 134 6 249 457 253 462 2.83e-17 84.3
Msa0099160 AT2G29090.2 24.362 431 279 13 29 433 39 448 3.18e-17 84.3
Msa0099160 AT2G29090.1 24.362 431 279 13 29 433 39 448 3.18e-17 84.3
Msa0099160 AT3G25180.1 27.027 259 163 8 215 454 237 488 4.15e-17 84.0
Msa0099160 AT3G32047.1 31.544 149 99 2 272 418 306 453 4.45e-17 84.0
Msa0099160 AT5G52400.1 21.362 426 299 13 63 457 94 514 4.47e-17 84.0
Msa0099160 AT4G37330.1 23.462 439 288 12 38 439 27 454 4.68e-17 84.0
Msa0099160 AT3G20080.4 33.333 147 89 4 280 422 183 324 5.29e-17 83.2
Msa0099160 AT3G20080.5 33.333 147 89 4 280 422 183 324 5.29e-17 83.2
Msa0099160 AT3G20080.6 33.333 147 89 4 280 422 183 324 5.29e-17 83.2
Msa0099160 AT3G20080.3 33.333 147 89 4 280 422 183 324 5.29e-17 83.2
Msa0099160 AT3G14660.1 25.373 268 171 10 197 442 226 486 5.59e-17 83.6
Msa0099160 AT3G20120.2 25.714 210 144 4 220 418 111 319 6.09e-17 82.8
Msa0099160 AT3G20120.3 25.714 210 144 4 220 418 111 319 6.09e-17 82.8
Msa0099160 AT3G20120.1 25.714 210 144 4 220 418 111 319 6.09e-17 82.8
Msa0099160 AT1G65670.1 26.872 227 157 6 213 435 215 436 6.25e-17 83.6
Msa0099160 AT1G13080.2 25.514 243 161 7 217 443 113 351 6.80e-17 82.8
Msa0099160 AT3G20120.4 27.143 210 141 4 220 418 247 455 7.97e-17 83.2
Msa0099160 AT3G44250.1 23.094 459 274 16 41 443 30 465 8.05e-17 83.2
Msa0099160 AT4G15396.1 26.562 256 168 9 213 457 214 460 9.06e-17 82.8
Msa0099160 AT1G74110.1 23.589 496 306 23 9 439 20 507 9.24e-17 83.2
Msa0099160 AT3G26190.1 23.362 458 275 17 41 443 30 466 1.03e-16 82.8
Msa0099160 AT3G26160.1 27.749 191 126 5 243 423 263 451 1.22e-16 82.8
Msa0099160 AT3G14680.1 24.092 303 208 10 142 442 204 486 1.43e-16 82.4
Msa0099160 AT2G23220.1 28.571 224 143 8 217 430 247 463 1.76e-16 82.0
Msa0099160 AT3G20130.2 29.586 169 113 3 259 422 265 432 1.77e-16 82.0
Msa0099160 AT3G20080.2 33.333 147 89 4 280 422 320 461 1.80e-16 82.0
Msa0099160 AT3G20080.1 33.333 147 89 4 280 422 320 461 1.80e-16 82.0
Msa0099160 AT4G12330.1 21.007 457 300 13 48 457 55 497 1.82e-16 82.0
Msa0099160 AT1G13090.2 24.176 455 266 19 35 433 26 457 1.92e-16 82.0
Msa0099160 AT3G20130.1 29.586 169 113 3 259 422 293 460 1.94e-16 82.0
Msa0099160 AT3G26180.2 25.000 208 144 5 243 440 129 334 2.97e-16 80.5
Msa0099160 AT1G67110.1 28.488 172 111 4 293 457 339 505 3.30e-16 81.3
Msa0099160 AT5G06905.1 27.368 190 123 3 272 447 297 485 3.69e-16 81.3
Msa0099160 AT5G45340.2 23.721 430 268 12 41 441 38 436 3.77e-16 80.9
Msa0099160 AT4G36220.1 23.162 272 180 6 214 459 232 500 4.17e-16 80.9
Msa0099160 AT3G26150.1 24.891 229 155 6 227 440 242 468 4.31e-16 80.9
Msa0099160 AT4G15330.2 30.872 149 100 2 272 418 275 422 4.81e-16 80.9
Msa0099160 AT4G12320.1 24.419 258 171 7 220 459 248 499 5.19e-16 80.9
Msa0099160 AT4G15396.3 26.923 234 154 8 213 435 214 441 5.86e-16 80.5
Msa0099160 AT2G42250.1 26.064 188 129 4 274 454 308 492 6.31e-16 80.5
Msa0099160 AT3G14690.2 24.254 268 174 9 197 442 261 521 6.69e-16 80.5
Msa0099160 AT3G14690.1 24.254 268 174 9 197 442 226 486 6.93e-16 80.5
Msa0099160 AT4G19230.2 23.629 474 275 17 18 444 6 439 7.44e-16 80.1
Msa0099160 AT3G14640.2 23.821 424 264 18 60 442 105 510 8.31e-16 80.1
Msa0099160 AT3G14640.1 23.821 424 264 18 60 442 83 488 8.47e-16 80.1
Msa0099160 AT4G13310.2 23.810 378 215 9 41 366 34 390 9.53e-16 79.3
Msa0099160 AT4G22690.1 25.778 225 151 6 243 457 317 535 1.22e-15 79.7
Msa0099160 AT4G22710.1 25.551 227 153 6 243 459 286 506 1.33e-15 79.3
Msa0099160 AT5G45340.1 23.788 433 270 12 36 439 33 434 1.38e-15 79.3
Msa0099160 AT2G23190.1 22.989 435 270 18 43 430 76 492 1.39e-15 79.3
Msa0099160 AT4G12300.1 26.038 265 159 11 211 459 254 497 1.61e-15 79.3
Msa0099160 AT2G25160.1 25.397 252 163 7 215 448 240 484 1.68e-15 79.3
Msa0099160 AT3G26180.1 25.000 208 144 5 243 440 263 468 1.89e-15 79.0
Msa0099160 AT3G20935.1 24.309 181 132 2 264 440 125 304 2.15e-15 77.8
Msa0099160 AT3G20100.1 24.176 273 184 9 162 418 191 456 2.16e-15 79.0
Msa0099160 AT4G19230.1 23.454 469 272 17 18 439 6 434 2.16e-15 78.6
Msa0099160 AT2G46660.1 21.205 448 284 15 40 439 71 497 2.17e-15 79.0
Msa0099160 AT3G14620.1 24.481 241 172 6 210 442 251 489 2.91e-15 78.6
Msa0099160 AT5G47990.1 26.291 213 137 7 227 422 251 460 3.02e-15 78.2
Msa0099160 AT1G13710.1 25.980 204 143 6 249 446 289 490 3.14e-15 78.2
Msa0099160 AT5G57220.1 32.164 171 100 4 274 439 293 452 3.21e-15 78.2
Msa0099160 AT1G05160.2 26.562 256 165 5 202 442 218 465 3.44e-15 78.2
Msa0099160 AT1G05160.1 26.562 256 165 5 202 442 218 465 3.44e-15 78.2
Msa0099160 AT5G42590.1 21.826 449 283 14 41 440 34 463 4.01e-15 77.8
Msa0099160 AT2G29090.3 27.897 233 144 6 213 433 133 353 4.39e-15 77.0
Msa0099160 AT5G24960.1 20.090 443 298 11 41 440 35 464 7.23e-15 77.0
Msa0099160 AT3G26170.1 24.519 208 145 5 243 440 263 468 7.66e-15 77.0
Msa0099160 AT4G20240.1 21.354 384 263 8 41 390 35 413 8.35e-15 76.6
Msa0099160 AT4G15110.1 24.561 399 237 15 80 437 171 546 1.12e-14 76.6
Msa0099160 AT1G64930.1 26.699 206 134 7 259 451 292 493 1.51e-14 76.3
Msa0099160 AT3G03470.1 20.705 454 298 14 41 440 33 478 1.57e-14 76.3
Msa0099160 AT3G26290.1 22.857 455 279 14 34 447 55 478 2.18e-14 75.5
Msa0099160 AT3G26290.2 23.191 470 286 16 22 447 53 491 2.25e-14 75.5
Msa0099160 AT1G11610.1 23.385 449 273 17 41 439 35 462 2.78e-14 75.5
Msa0099160 AT1G11610.2 23.385 449 273 17 41 439 35 462 3.38e-14 75.1
Msa0099160 AT3G20110.1 25.773 194 134 3 235 422 261 450 3.43e-14 75.1
Msa0099160 AT3G26830.1 22.538 457 261 17 41 433 30 457 3.86e-14 74.7
Msa0099160 AT5G38450.1 30.263 152 92 4 293 439 345 487 4.55e-14 74.7
Msa0099160 AT3G26280.1 27.273 220 140 7 249 451 270 486 4.86e-14 74.7
Msa0099160 AT3G26280.2 27.273 220 140 7 249 451 287 503 5.93e-14 74.3
Msa0099160 AT1G28430.1 23.958 288 188 7 142 418 187 454 6.71e-14 74.3
Msa0099160 AT4G20240.2 21.727 359 243 7 41 366 35 388 1.04e-13 73.2
Msa0099160 AT2G30490.1 26.455 189 132 7 254 437 282 468 1.33e-13 73.2
Msa0099160 AT1G64950.1 23.301 206 149 4 259 457 293 496 1.89e-13 72.8
Msa0099160 AT2G27010.1 21.446 415 260 12 50 422 46 436 1.99e-13 72.8
Msa0099160 AT3G61880.1 25.214 234 166 5 232 458 284 515 2.03e-13 72.8
Msa0099160 AT1G75130.1 26.471 170 116 4 275 442 315 477 2.21e-13 72.4
Msa0099160 AT1G64940.1 25.000 208 145 6 259 458 294 498 2.26e-13 72.4
Msa0099160 AT3G61880.2 25.214 234 166 5 232 458 284 515 3.95e-13 72.0
Msa0099160 AT3G19270.1 24.648 426 271 16 41 439 36 438 4.02e-13 71.6
Msa0099160 AT4G15350.1 28.025 157 108 2 274 426 303 458 4.07e-13 71.6
Msa0099160 AT4G32170.1 25.521 192 132 5 254 440 290 475 4.31e-13 71.6
Msa0099160 AT1G57750.1 28.736 174 115 5 269 440 302 468 4.45e-13 71.6
Msa0099160 AT3G20950.1 23.077 208 143 5 231 422 258 464 4.60e-13 71.6
Msa0099160 AT1G55940.2 26.761 213 143 5 237 439 256 465 4.85e-13 71.6
Msa0099160 AT3G20090.1 27.465 142 95 3 280 418 183 319 5.95e-13 70.5
Msa0099160 AT3G20090.2 19.240 421 271 15 50 418 54 457 6.77e-13 71.2
Msa0099160 AT3G19270.2 24.648 426 271 16 41 439 36 438 7.06e-13 70.9
Msa0099160 AT3G30180.1 21.396 444 319 9 16 442 11 441 8.52e-13 70.5
Msa0099160 AT1G13140.1 25.431 232 152 7 232 444 271 500 1.33e-12 70.1
Msa0099160 AT2G45970.1 25.652 230 150 7 249 458 278 506 1.97e-12 69.7
Msa0099160 AT1G13140.2 26.923 182 120 6 274 444 295 474 2.59e-12 69.3
Msa0099160 AT3G20960.1 28.082 146 97 4 280 422 216 356 2.87e-12 68.6
Msa0099160 AT3G53130.1 25.407 307 197 11 135 430 216 501 2.89e-12 68.9
Msa0099160 AT2G32440.2 25.292 257 167 7 201 442 216 462 3.54e-12 68.6
Msa0099160 AT2G32440.1 25.292 257 167 7 201 442 216 462 3.54e-12 68.6
Msa0099160 AT3G20960.2 28.082 146 97 4 280 422 319 459 3.65e-12 68.9
Msa0099160 AT1G33720.2 28.571 196 118 6 266 447 194 381 3.89e-12 68.2
Msa0099160 AT1G55940.1 27.053 207 138 6 237 433 256 459 4.93e-12 68.2
Msa0099160 AT2G05180.1 22.311 251 161 8 166 391 184 425 5.50e-12 67.8
Msa0099160 AT1G78490.1 26.009 223 153 6 232 446 238 456 5.54e-12 68.2
Msa0099160 AT5G42580.1 22.148 298 201 6 130 422 174 445 6.32e-12 67.8
Msa0099160 AT2G02580.1 21.053 475 292 11 41 454 33 485 7.23e-12 67.8
Msa0099160 AT3G26210.1 29.012 162 111 4 274 433 301 460 8.20e-12 67.8
Msa0099160 AT3G44970.1 26.887 212 132 6 249 446 254 456 9.35e-12 67.4
Msa0099160 AT1G01600.1 27.014 211 125 7 231 427 277 472 1.35e-11 67.0
Msa0099160 AT5G36110.1 27.426 237 153 8 213 439 220 447 1.49e-11 66.6
Msa0099160 AT1G13100.1 25.743 202 137 6 243 433 258 457 2.10e-11 66.2
Msa0099160 AT5G36130.1 31.967 122 74 3 327 446 3 117 2.67e-11 61.6
Msa0099160 AT2G44890.2 27.027 222 123 9 235 435 256 459 3.12e-11 65.9
Msa0099160 AT1G11680.1 26.244 221 147 5 231 437 236 454 3.65e-11 65.5
Msa0099160 AT3G26125.1 25.926 189 120 5 274 444 322 508 3.73e-11 65.5
Msa0099160 AT5G23190.1 24.900 249 157 10 237 458 291 536 4.41e-11 65.5
Msa0099160 AT2G12190.1 22.772 202 147 4 259 451 293 494 5.02e-11 65.1
Msa0099160 AT4G15380.1 28.105 153 105 2 274 422 305 456 5.34e-11 65.1
Msa0099160 AT2G27000.1 25.778 225 144 7 200 418 247 454 5.60e-11 65.1
Msa0099160 AT2G27690.1 25.000 224 153 8 227 440 245 463 8.49e-11 64.3

Find 107 sgRNAs with CRISPR-Local

Find 222 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTTTCATTTCTTCGCATTT+TGG 0.056798 1_3:-5247016 None:intergenic
CTCTTCAAAATCTGCCTTAT+TGG 0.113051 1_3:-5245949 None:intergenic
TTGAGGTGTCATTAAGATTT+TGG 0.154853 1_3:-5245657 None:intergenic
ATTCTCTTGCATTCAATATA+AGG 0.184506 1_3:-5246092 None:intergenic
TTCATCTTAGTAACTTTAAT+TGG 0.190391 1_3:+5244073 Msa0099160:CDS
ATTGTCATCTATTGTTTATT+TGG 0.197360 1_3:+5246209 Msa0099160:CDS
GTTATCTCTATTGCCCATTT+TGG 0.198847 1_3:+5244107 Msa0099160:CDS
ACTTTCCTTAACTTCCAAAA+TGG 0.218912 1_3:-5244121 None:intergenic
TAACATCAGTTGCTAGTCTT+AGG 0.272964 1_3:-5245708 None:intergenic
GCTTCTCCTCTTCACCAAAA+AGG 0.273113 1_3:+5244882 Msa0099160:CDS
AGACTAGCAACTGATGTTAT+TGG 0.279360 1_3:+5245712 Msa0099160:CDS
TCATCGAGATCTTTAGCATT+AGG 0.306324 1_3:-5246303 None:intergenic
AAACCTGTAGAACTTGAATA+TGG 0.313560 1_3:+5247178 Msa0099160:CDS
CCTTATGCATTCATACCATT+TGG 0.322754 1_3:+5247046 Msa0099160:CDS
CTTCGAGAGATTGATGGATT+TGG 0.326636 1_3:+5246264 Msa0099160:CDS
TTCTCTTGCATTCAATATAA+GGG 0.331969 1_3:-5246091 None:intergenic
CTATTCTTCAAGAGCCAATA+AGG 0.355032 1_3:+5245935 Msa0099160:intron
CTTCCACTGCTAGCAAAGTA+TGG 0.365850 1_3:+5244178 Msa0099160:CDS
TCAGTCCTTGCCAAGCAATA+TGG 0.366947 1_3:+5244214 Msa0099160:CDS
GCATTCATACCATTTGGAAT+TGG 0.375274 1_3:+5247052 Msa0099160:CDS
TAAATGGAGCAGATTTCATA+TGG 0.376669 1_3:+5244755 Msa0099160:intron
TGTAATCTCAAGTGTCCCTT+TGG 0.385709 1_3:+5244039 Msa0099160:CDS
GAAGAGAATACCAGGCACTA+TGG 0.386147 1_3:+5245966 Msa0099160:CDS
CCAAATGGTATGAATGCATA+AGG 0.387023 1_3:-5247046 None:intergenic
CTCCACAACACAACTTAAGA+TGG 0.387329 1_3:+5245870 Msa0099160:CDS
ACATATGAACACTTACTTGC+CGG 0.390491 1_3:+5246165 Msa0099160:CDS
TGAAGAGGAGAAGCAGAGAT+AGG 0.392692 1_3:-5244873 None:intergenic
ACAAGAAATTCTTCGAAGTT+CGG 0.401276 1_3:-5246068 None:intergenic
CAATATAGGAACCTGTAGAT+AGG 0.401929 1_3:-5244238 None:intergenic
GATATATTACCTTTGGAAGA+AGG 0.411794 1_3:-5246529 None:intergenic
CTTTCCTTAACTTCCAAAAT+GGG 0.413636 1_3:-5244120 None:intergenic
TGGAAGTTAAGGAAAGTTCC+AGG 0.415935 1_3:+5244127 Msa0099160:CDS
CCACCATCTCTGCCTCTTGT+AGG 0.416631 1_3:+5244151 Msa0099160:CDS
GGAGAGGGAATGCTTCTGTT+TGG 0.419950 1_3:-5244852 None:intergenic
AACTTTAATTGGAGGATTAG+TGG 0.427216 1_3:+5244084 Msa0099160:CDS
AGAGGCAGAGATGGTGGGCC+TGG 0.431699 1_3:-5244145 None:intergenic
AGCAATATGGCCCTATCTAC+AGG 0.440942 1_3:+5244227 Msa0099160:CDS
AAACCATATTCAAGTTCTAC+AGG 0.445626 1_3:-5247181 None:intergenic
GCAAGGACTGAGAAAACGTC+AGG 0.456279 1_3:-5244202 None:intergenic
CTTTGGTATGACAGGGAACA+TGG 0.458198 1_3:+5246912 Msa0099160:intron
GCAGCATTTGGTGTCAACTT+TGG 0.461085 1_3:+5245739 Msa0099160:CDS
TGAACACTTACTTGCCGGCT+CGG 0.461430 1_3:+5246170 Msa0099160:CDS
AACATCAGTTGCTAGTCTTA+GGG 0.462837 1_3:-5245707 None:intergenic
GTTATTGGAGATGCAGCATT+TGG 0.463478 1_3:+5245727 Msa0099160:CDS
ATCTTAGTAACTTTAATTGG+AGG 0.464848 1_3:+5244076 Msa0099160:CDS
CAACTTAAGATGGATTTGTC+TGG 0.468898 1_3:+5245880 Msa0099160:CDS
AAATTGCTTCGAGAGATTGA+TGG 0.471171 1_3:+5246258 Msa0099160:CDS
ACATCAAATGAAGTAGATAT+AGG 0.477410 1_3:+5246500 Msa0099160:CDS
ACTTTAATTGGAGGATTAGT+GGG 0.483442 1_3:+5244085 Msa0099160:CDS
ATTGATTCACAAATTGAATG+AGG 0.486454 1_3:-5245772 None:intergenic
TTCTGACCAATACATGCCCT+TGG 0.488795 1_3:-5247076 None:intergenic
GCATCTGCTATGATTATAAG+AGG 0.491398 1_3:-5244786 None:intergenic
GAATACCAGGCACTATGGAT+TGG 0.497621 1_3:+5245971 Msa0099160:CDS
TGATATTGTTAAGAAGAGAA+TGG 0.498801 1_3:+5246035 Msa0099160:CDS
ATTTATTCAGGTGATTAAAG+AGG 0.500355 1_3:+5246436 Msa0099160:intron
ATGAATATTGTTGAAGCCAA+AGG 0.504340 1_3:-5244055 None:intergenic
CTTCATATAGTAAGAGAGGA+GGG 0.515293 1_3:-5243985 None:intergenic
ATTGGTCCAAGGGCATGTAT+TGG 0.522839 1_3:+5247070 Msa0099160:CDS
ATCCATCTTAAGTTGTGTTG+TGG 0.524233 1_3:-5245872 None:intergenic
TACCATTTGGAATTGGTCCA+AGG 0.525399 1_3:+5247059 Msa0099160:CDS
TGAATATTGTTGAAGCCAAA+GGG 0.526594 1_3:-5244054 None:intergenic
TCATATAGTAAGAGAGGAGG+GGG 0.532425 1_3:-5243983 None:intergenic
TCACTAACCTGATCAAGATA+AGG 0.533650 1_3:-5246333 None:intergenic
AAAAGATGTGGTAGCCGAGC+CGG 0.534170 1_3:-5246184 None:intergenic
GTAGATAGGGCCATATTGCT+TGG 0.534282 1_3:-5244224 None:intergenic
ATTTCGTCATTCACTTGACA+TGG 0.535104 1_3:+5247153 Msa0099160:CDS
AACAATATCATCAAGACGAC+CGG 0.536041 1_3:-5246022 None:intergenic
GATTTACACTGTCTCTCCAC+TGG 0.536380 1_3:+5246466 Msa0099160:CDS
CAAATGGTATGAATGCATAA+GGG 0.539250 1_3:-5247045 None:intergenic
AATATAGGAACCTGTAGATA+GGG 0.539554 1_3:-5244237 None:intergenic
GCCCTTGGACCAATTCCAAA+TGG 0.540794 1_3:-5247061 None:intergenic
TGCAGAGCTTTGTAAAGAAG+TGG 0.544279 1_3:+5244806 Msa0099160:CDS
AGTAAGCTTGATCTCTTGCA+AGG 0.546200 1_3:-5247104 None:intergenic
TGCTAGTCATCCAAATGTTG+AGG 0.549862 1_3:+5246233 Msa0099160:CDS
GGAGAAGCAGAGATAGGAGA+GGG 0.549868 1_3:-5244867 None:intergenic
CCTACAAGAGGCAGAGATGG+TGG 0.557785 1_3:-5244151 None:intergenic
AGGAGAAGCAGAGATAGGAG+AGG 0.562756 1_3:-5244868 None:intergenic
ACCATTTGGAATTGGTCCAA+GGG 0.564750 1_3:+5247060 Msa0099160:CDS
GCATTAGGTATCTTATCATG+TGG 0.572019 1_3:-5246288 None:intergenic
TGTCCTACAAGAGGCAGAGA+TGG 0.572269 1_3:-5244154 None:intergenic
GCTAGTCATCCAAATGTTGA+GGG 0.575221 1_3:+5246234 Msa0099160:CDS
GGGCCATACTTTGCTAGCAG+TGG 0.576088 1_3:-5244181 None:intergenic
AAATGGAGCAGATTTCATAT+GGG 0.585010 1_3:+5244756 Msa0099160:intron
CTTGAAATAAAAGAATGAGT+GGG 0.589536 1_3:-5243949 None:intergenic
AGGAGGTTACCTTCTTCCAA+AGG 0.593668 1_3:+5246520 Msa0099160:CDS
ACATGGGTATGGTTAGCACT+TGG 0.594222 1_3:+5246929 Msa0099160:CDS
TATACTTCATATAGTAAGAG+AGG 0.599285 1_3:-5243989 None:intergenic
CATACTTTGCTAGCAGTGGA+AGG 0.600543 1_3:-5244177 None:intergenic
TATGACAGGGAACATGGGTA+TGG 0.601202 1_3:+5246918 Msa0099160:intron
GATGTTTCTCTTGCAACCAG+TGG 0.603659 1_3:-5246482 None:intergenic
TAGGGCCATATTGCTTGGCA+AGG 0.608634 1_3:-5244219 None:intergenic
AAGTAAGTGTTCATATGTAA+CGG 0.608761 1_3:-5246160 None:intergenic
GCAGAGCTTTGTAAAGAAGT+GGG 0.612046 1_3:+5244807 Msa0099160:CDS
TCAAATGAAGTAGATATAGG+AGG 0.612765 1_3:+5246503 Msa0099160:CDS
TTCATATAGTAAGAGAGGAG+GGG 0.618814 1_3:-5243984 None:intergenic
AGTGGAAGGTGTCCTACAAG+AGG 0.625114 1_3:-5244163 None:intergenic
AGGTGATTAAAGAGGCAATG+AGG 0.626001 1_3:+5246444 Msa0099160:intron
CTACAAGAGGCAGAGATGGT+GGG 0.630733 1_3:-5244150 None:intergenic
AGATGACAATGTAAAAGATG+TGG 0.630991 1_3:-5246196 None:intergenic
TTGAAATAAAAGAATGAGTG+GGG 0.635611 1_3:-5243948 None:intergenic
ACTTCATATAGTAAGAGAGG+AGG 0.637501 1_3:-5243986 None:intergenic
AAGAGAATCAAAGAGTGTGT+CGG 0.648095 1_3:+5246107 Msa0099160:CDS
TTTGGTATGACAGGGAACAT+GGG 0.663814 1_3:+5246913 Msa0099160:intron
GCTTGAAATAAAAGAATGAG+TGG 0.665976 1_3:-5243950 None:intergenic
AATGCGAAGAAATGAAACGA+AGG 0.686995 1_3:+5247020 Msa0099160:CDS
CAAGGACTGAGAAAACGTCA+GGG 0.696831 1_3:-5244201 None:intergenic
CATATAGTAAGAGAGGAGGG+GGG 0.733018 1_3:-5243982 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAACTGTTATTGT+TGG + chr1_3:5244335-5244354 Msa0099160:intron 15.0%
!! AAAAAAAATACAAGTGTATT+TGG + chr1_3:5244505-5244524 Msa0099160:intron 15.0%
!! TATAAATATGTAAATATACC+TGG - chr1_3:5244919-5244938 None:intergenic 15.0%
!! ATTAAGGTTAAAGATATTAT+AGG + chr1_3:5244939-5244958 Msa0099160:intron 15.0%
!! TCTTAAATAACACATAAATT+TGG - chr1_3:5244987-5245006 None:intergenic 15.0%
!! TAAAATTCATTCAAATACAA+TGG + chr1_3:5245336-5245355 Msa0099160:intron 15.0%
!!! AACAACTAATTTAAAATTGT+AGG + chr1_3:5245530-5245549 Msa0099160:intron 15.0%
!!! ACAACTAATTTAAAATTGTA+GGG + chr1_3:5245531-5245550 Msa0099160:intron 15.0%
!! TGTACAAATAAAAATTTAAC+CGG + chr1_3:5246003-5246022 Msa0099160:CDS 15.0%
!! TTGTAAAAAAATAAAATCCA+TGG - chr1_3:5246560-5246579 None:intergenic 15.0%
!!! TACTTTTTGACTTTTTATTT+TGG + chr1_3:5246767-5246786 Msa0099160:intron 15.0%
!! TTCATCTTAGTAACTTTAAT+TGG + chr1_3:5244073-5244092 Msa0099160:CDS 20.0%
!!! CTAGGGTTAATATTTTATTT+AGG + chr1_3:5244562-5244581 Msa0099160:intron 20.0%
!!! TATTGTTCCTATTTGTTAAA+TGG + chr1_3:5244739-5244758 Msa0099160:intron 20.0%
!! ATATGATCAATACTATTTAG+TGG + chr1_3:5245086-5245105 Msa0099160:intron 20.0%
!! TATGATCAATACTATTTAGT+GGG + chr1_3:5245087-5245106 Msa0099160:intron 20.0%
!! GATGAGAAATACTATATTAT+CGG + chr1_3:5245570-5245589 Msa0099160:intron 20.0%
!! ATTGTCATCTATTGTTTATT+TGG + chr1_3:5246209-5246228 Msa0099160:CDS 20.0%
!!! TAAGTTCTTTTCATTTATTC+AGG + chr1_3:5246424-5246443 Msa0099160:intron 20.0%
!!! CATATGATATTAGTTTTTGT+TGG + chr1_3:5246674-5246693 Msa0099160:intron 20.0%
!!! ATATTAGTTTTTGTTGGATT+TGG + chr1_3:5246680-5246699 Msa0099160:intron 20.0%
!! AATTCAAATATGTCTATCTA+AGG + chr1_3:5246882-5246901 Msa0099160:intron 20.0%
! TTGAAATAAAAGAATGAGTG+GGG - chr1_3:5243951-5243970 None:intergenic 25.0%
! CTTGAAATAAAAGAATGAGT+GGG - chr1_3:5243952-5243971 None:intergenic 25.0%
! TATACTTCATATAGTAAGAG+AGG - chr1_3:5243992-5244011 None:intergenic 25.0%
! ATCTTAGTAACTTTAATTGG+AGG + chr1_3:5244076-5244095 Msa0099160:CDS 25.0%
! TATGTATGCAAGAACAATAT+AGG - chr1_3:5244255-5244274 None:intergenic 25.0%
!!! ATTTTGACTTGTGAATTTTG+TGG + chr1_3:5244445-5244464 Msa0099160:intron 25.0%
! ATTTGGTCATGTAAATTATG+TGG - chr1_3:5244970-5244989 None:intergenic 25.0%
!!! AGATTAGTTTGAACTGTAAA+TGG + chr1_3:5245004-5245023 Msa0099160:intron 25.0%
! GTGTGACAAATATATTATTG+AGG - chr1_3:5245147-5245166 None:intergenic 25.0%
!! ATCTTGCAGTCTATTTTATA+TGG - chr1_3:5245169-5245188 None:intergenic 25.0%
!! CACAAAAGATAAAAGAGTTT+TGG - chr1_3:5245366-5245385 None:intergenic 25.0%
!!! GTGTGTATTTTTAAAATGAG+TGG + chr1_3:5245383-5245402 Msa0099160:intron 25.0%
!! TCGATAAATGATTGCATTTT+AGG - chr1_3:5245628-5245647 None:intergenic 25.0%
!! AAAGATTATGTCTTCTTTTG+AGG - chr1_3:5245677-5245696 None:intergenic 25.0%
!! ATTGATTCACAAATTGAATG+AGG - chr1_3:5245775-5245794 None:intergenic 25.0%
! TGATATTGTTAAGAAGAGAA+TGG + chr1_3:5246035-5246054 Msa0099160:CDS 25.0%
! TTCTCTTGCATTCAATATAA+GGG - chr1_3:5246094-5246113 None:intergenic 25.0%
! ATTCTCTTGCATTCAATATA+AGG - chr1_3:5246095-5246114 None:intergenic 25.0%
! AAGTAAGTGTTCATATGTAA+CGG - chr1_3:5246163-5246182 None:intergenic 25.0%
!!! GTTTGTTTTGAACTTTGATT+TGG + chr1_3:5246377-5246396 Msa0099160:intron 25.0%
!! AGAACTTACAACTATTTTCT+TGG - chr1_3:5246412-5246431 None:intergenic 25.0%
! ATTTATTCAGGTGATTAAAG+AGG + chr1_3:5246436-5246455 Msa0099160:intron 25.0%
! ACATCAAATGAAGTAGATAT+AGG + chr1_3:5246500-5246519 Msa0099160:CDS 25.0%
GCTTGAAATAAAAGAATGAG+TGG - chr1_3:5243953-5243972 None:intergenic 30.0%
TGAATATTGTTGAAGCCAAA+GGG - chr1_3:5244057-5244076 None:intergenic 30.0%
ATGAATATTGTTGAAGCCAA+AGG - chr1_3:5244058-5244077 None:intergenic 30.0%
AACTTTAATTGGAGGATTAG+TGG + chr1_3:5244084-5244103 Msa0099160:CDS 30.0%
! ACTTTAATTGGAGGATTAGT+GGG + chr1_3:5244085-5244104 Msa0099160:CDS 30.0%
CTTTCCTTAACTTCCAAAAT+GGG - chr1_3:5244123-5244142 None:intergenic 30.0%
ACTTTCCTTAACTTCCAAAA+TGG - chr1_3:5244124-5244143 None:intergenic 30.0%
AATATAGGAACCTGTAGATA+GGG - chr1_3:5244240-5244259 None:intergenic 30.0%
AACCAGAGAACTAAAAGAAA+AGG - chr1_3:5244308-5244327 None:intergenic 30.0%
AAGTTCATCCTCATCAAAAA+GGG - chr1_3:5244403-5244422 None:intergenic 30.0%
ATCTGCTCCATTTAACAAAT+AGG - chr1_3:5244749-5244768 None:intergenic 30.0%
TAAATGGAGCAGATTTCATA+TGG + chr1_3:5244755-5244774 Msa0099160:intron 30.0%
AAATGGAGCAGATTTCATAT+GGG + chr1_3:5244756-5244775 Msa0099160:intron 30.0%
!! AATAAACCTTTTTGGTGAAG+AGG - chr1_3:5244891-5244910 None:intergenic 30.0%
! TGGTGAAGAATAAACCTTTT+TGG - chr1_3:5244899-5244918 None:intergenic 30.0%
AAAAAGGTTTATTCTTCACC+AGG + chr1_3:5244898-5244917 Msa0099160:intron 30.0%
! TCAACATTGCATTTTTCATG+TGG + chr1_3:5245233-5245252 Msa0099160:intron 30.0%
! TGCATTTTTCATGTGGATTT+CGG + chr1_3:5245240-5245259 Msa0099160:intron 30.0%
TAAGTGTGTATGTCATCTAT+GGG - chr1_3:5245422-5245441 None:intergenic 30.0%
TTAAGTGTGTATGTCATCTA+TGG - chr1_3:5245423-5245442 None:intergenic 30.0%
AACATCAAAATACAACGATG+CGG - chr1_3:5245503-5245522 None:intergenic 30.0%
!!! TTGAGGTGTCATTAAGATTT+TGG - chr1_3:5245660-5245679 None:intergenic 30.0%
GGTTCCTTCTCAATTATAAT+TGG + chr1_3:5245901-5245920 Msa0099160:intron 30.0%
TAGGCCAATTATAATTGAGA+AGG - chr1_3:5245908-5245927 None:intergenic 30.0%
ACAAGAAATTCTTCGAAGTT+CGG - chr1_3:5246071-5246090 None:intergenic 30.0%
AGATGACAATGTAAAAGATG+TGG - chr1_3:5246199-5246218 None:intergenic 30.0%
! AAGTTTTCCTTATCTTGATC+AGG + chr1_3:5246326-5246345 Msa0099160:CDS 30.0%
!! TGAACTTTGATTTGGTTGAA+AGG + chr1_3:5246385-5246404 Msa0099160:intron 30.0%
!! GAACTTTGATTTGGTTGAAA+GGG + chr1_3:5246386-5246405 Msa0099160:intron 30.0%
TCAAATGAAGTAGATATAGG+AGG + chr1_3:5246503-5246522 Msa0099160:CDS 30.0%
! GATATATTACCTTTGGAAGA+AGG - chr1_3:5246532-5246551 None:intergenic 30.0%
GGACAAAGATATATTACCTT+TGG - chr1_3:5246539-5246558 None:intergenic 30.0%
AGGTAATATATCTTTGTCCA+TGG + chr1_3:5246540-5246559 Msa0099160:intron 30.0%
ACTAGTGTTAAGATAAGTTC+TGG + chr1_3:5246581-5246600 Msa0099160:intron 30.0%
!!! TAGTCCCATCACAATTTTTT+TGG + chr1_3:5246645-5246664 Msa0099160:intron 30.0%
! ACATGTTACTCTAGAAAATG+TGG - chr1_3:5246794-5246813 None:intergenic 30.0%
CAAATGCGTGATTTCTTATT+CGG + chr1_3:5246855-5246874 Msa0099160:intron 30.0%
! GTTTCATTTCTTCGCATTTT+GGG - chr1_3:5247018-5247037 None:intergenic 30.0%
CAAATGGTATGAATGCATAA+GGG - chr1_3:5247048-5247067 None:intergenic 30.0%
AAACCTGTAGAACTTGAATA+TGG + chr1_3:5247178-5247197 Msa0099160:CDS 30.0%
! AAACCATATTCAAGTTCTAC+AGG - chr1_3:5247184-5247203 None:intergenic 30.0%
TTCATATAGTAAGAGAGGAG+GGG - chr1_3:5243987-5244006 None:intergenic 35.0%
CTTCATATAGTAAGAGAGGA+GGG - chr1_3:5243988-5244007 None:intergenic 35.0%
ACTTCATATAGTAAGAGAGG+AGG - chr1_3:5243989-5244008 None:intergenic 35.0%
! GTTATCTCTATTGCCCATTT+TGG + chr1_3:5244107-5244126 Msa0099160:CDS 35.0%
!! ATTGCCCATTTTGGAAGTTA+AGG + chr1_3:5244116-5244135 Msa0099160:CDS 35.0%
CAATATAGGAACCTGTAGAT+AGG - chr1_3:5244241-5244260 None:intergenic 35.0%
CAGAGAACTAAAAGAAAAGG+AGG - chr1_3:5244305-5244324 None:intergenic 35.0%
!!! CTCCTTTTCTTTTAGTTCTC+TGG + chr1_3:5244303-5244322 Msa0099160:intron 35.0%
!!! TTTTAGTTCTCTGGTTGAGA+AGG + chr1_3:5244312-5244331 Msa0099160:intron 35.0%
! TCTTCAAACCCTTTTTGATG+AGG + chr1_3:5244392-5244411 Msa0099160:intron 35.0%
GAAGTTCATCCTCATCAAAA+AGG - chr1_3:5244404-5244423 None:intergenic 35.0%
! GACTTGTGAATTTTGTGGTT+TGG + chr1_3:5244450-5244469 Msa0099160:intron 35.0%
!! TTGTGAATTTTGTGGTTTGG+TGG + chr1_3:5244453-5244472 Msa0099160:intron 35.0%
!!! TGTGAATTTTGTGGTTTGGT+GGG + chr1_3:5244454-5244473 Msa0099160:intron 35.0%
! TTACATGCAAGTTTGAGACT+AGG + chr1_3:5244544-5244563 Msa0099160:intron 35.0%
! TACATGCAAGTTTGAGACTA+GGG + chr1_3:5244545-5244564 Msa0099160:intron 35.0%
GCATCTGCTATGATTATAAG+AGG - chr1_3:5244789-5244808 None:intergenic 35.0%
! GCATTTTTCATGTGGATTTC+GGG + chr1_3:5245241-5245260 Msa0099160:intron 35.0%
! CATTTTTCATGTGGATTTCG+GGG + chr1_3:5245242-5245261 Msa0099160:intron 35.0%
GTTAATGCCATTCAACTTAG+TGG - chr1_3:5245281-5245300 None:intergenic 35.0%
! AAGAGAGACAAAGTGTTTGT+GGG - chr1_3:5245480-5245499 None:intergenic 35.0%
AAAATTGTAGGGACTTGCAA+TGG + chr1_3:5245542-5245561 Msa0099160:intron 35.0%
! TTGCATTTTAGGCACTAAGT+TGG - chr1_3:5245617-5245636 None:intergenic 35.0%
!! AACATCAGTTGCTAGTCTTA+GGG - chr1_3:5245710-5245729 None:intergenic 35.0%
!! TAACATCAGTTGCTAGTCTT+AGG - chr1_3:5245711-5245730 None:intergenic 35.0%
AGACTAGCAACTGATGTTAT+TGG + chr1_3:5245712-5245731 Msa0099160:CDS 35.0%
! ATCCATCTTAAGTTGTGTTG+TGG - chr1_3:5245875-5245894 None:intergenic 35.0%
! CAACTTAAGATGGATTTGTC+TGG + chr1_3:5245880-5245899 Msa0099160:CDS 35.0%
CTTGAAGAATAGGAGCAATT+AGG - chr1_3:5245927-5245946 None:intergenic 35.0%
!! CTTATTGGCTCTTGAAGAAT+AGG - chr1_3:5245937-5245956 None:intergenic 35.0%
CTATTCTTCAAGAGCCAATA+AGG + chr1_3:5245935-5245954 Msa0099160:intron 35.0%
CTCTTCAAAATCTGCCTTAT+TGG - chr1_3:5245952-5245971 None:intergenic 35.0%
!! CAGATTTTGAAGAGAATACC+AGG + chr1_3:5245958-5245977 Msa0099160:CDS 35.0%
AACAATATCATCAAGACGAC+CGG - chr1_3:5246025-5246044 None:intergenic 35.0%
! AAGAGAATCAAAGAGTGTGT+CGG + chr1_3:5246107-5246126 Msa0099160:CDS 35.0%
ACATATGAACACTTACTTGC+CGG + chr1_3:5246165-5246184 Msa0099160:CDS 35.0%
! AGCAATTTTCCCTCAACATT+TGG - chr1_3:5246246-5246265 None:intergenic 35.0%
AAATTGCTTCGAGAGATTGA+TGG + chr1_3:5246258-5246277 Msa0099160:CDS 35.0%
GCATTAGGTATCTTATCATG+TGG - chr1_3:5246291-5246310 None:intergenic 35.0%
TCATCGAGATCTTTAGCATT+AGG - chr1_3:5246306-5246325 None:intergenic 35.0%
TCACTAACCTGATCAAGATA+AGG - chr1_3:5246336-5246355 None:intergenic 35.0%
!!! TCCCATCACAATTTTTTTGG+AGG + chr1_3:5246648-5246667 Msa0099160:intron 35.0%
CCCTCCAAAAAAATTGTGAT+GGG - chr1_3:5246652-5246671 None:intergenic 35.0%
!!! CCCATCACAATTTTTTTGGA+GGG + chr1_3:5246649-5246668 Msa0099160:intron 35.0%
!!! CCATCACAATTTTTTTGGAG+GGG + chr1_3:5246650-5246669 Msa0099160:intron 35.0%
CTTGATCAGACAGTTCAAAT+TGG - chr1_3:5246736-5246755 None:intergenic 35.0%
ACTGTCTGATCAAGATCAAA+TGG + chr1_3:5246742-5246761 Msa0099160:intron 35.0%
TTTGACATAGTTGTGCAATC+TGG - chr1_3:5246839-5246858 None:intergenic 35.0%
! CTATCTAAGGCTTTATGCTT+TGG + chr1_3:5246895-5246914 Msa0099160:intron 35.0%
CTTTATGCTTTGGTATGACA+GGG + chr1_3:5246905-5246924 Msa0099160:intron 35.0%
AGAGCCAGAAAAATTCAAAC+CGG + chr1_3:5246982-5247001 Msa0099160:CDS 35.0%
! CGTTTCATTTCTTCGCATTT+TGG - chr1_3:5247019-5247038 None:intergenic 35.0%
AATGCGAAGAAATGAAACGA+AGG + chr1_3:5247020-5247039 Msa0099160:CDS 35.0%
CCAAATGGTATGAATGCATA+AGG - chr1_3:5247049-5247068 None:intergenic 35.0%
CCTTATGCATTCATACCATT+TGG + chr1_3:5247046-5247065 Msa0099160:CDS 35.0%
! GCATTCATACCATTTGGAAT+TGG + chr1_3:5247052-5247071 Msa0099160:CDS 35.0%
ATTTCGTCATTCACTTGACA+TGG + chr1_3:5247153-5247172 Msa0099160:CDS 35.0%
TCATATAGTAAGAGAGGAGG+GGG - chr1_3:5243986-5244005 None:intergenic 40.0%
TGTAATCTCAAGTGTCCCTT+TGG + chr1_3:5244039-5244058 Msa0099160:CDS 40.0%
TGGAAGTTAAGGAAAGTTCC+AGG + chr1_3:5244127-5244146 Msa0099160:CDS 40.0%
AAATAGCAGCCATCATGACT+AGG - chr1_3:5244429-5244448 None:intergenic 40.0%
! GTTCTAGTGGATATTGCTTG+TGG + chr1_3:5244482-5244501 Msa0099160:intron 40.0%
! TGCAGAGCTTTGTAAAGAAG+TGG + chr1_3:5244806-5244825 Msa0099160:CDS 40.0%
! GCAGAGCTTTGTAAAGAAGT+GGG + chr1_3:5244807-5244826 Msa0099160:CDS 40.0%
! GAATGCATGCTCTCTCTTTT+TGG + chr1_3:5245041-5245060 Msa0099160:intron 40.0%
! AGAGAGACAAAGTGTTTGTG+GGG - chr1_3:5245479-5245498 None:intergenic 40.0%
! GAAGAGAGACAAAGTGTTTG+TGG - chr1_3:5245481-5245500 None:intergenic 40.0%
! ACTAAGTTGGCTAAGTGTGA+TGG - chr1_3:5245604-5245623 None:intergenic 40.0%
GTTATTGGAGATGCAGCATT+TGG + chr1_3:5245727-5245746 Msa0099160:CDS 40.0%
CTCCACAACACAACTTAAGA+TGG + chr1_3:5245870-5245889 Msa0099160:CDS 40.0%
! ATTTTCCAATCCATAGTGCC+TGG - chr1_3:5245979-5245998 None:intergenic 40.0%
TGCTAGTCATCCAAATGTTG+AGG + chr1_3:5246233-5246252 Msa0099160:CDS 40.0%
GCTAGTCATCCAAATGTTGA+GGG + chr1_3:5246234-5246253 Msa0099160:CDS 40.0%
!! CTTCGAGAGATTGATGGATT+TGG + chr1_3:5246264-5246283 Msa0099160:CDS 40.0%
AGGTGATTAAAGAGGCAATG+AGG + chr1_3:5246444-5246463 Msa0099160:intron 40.0%
CCCCTCCAAAAAAATTGTGA+TGG - chr1_3:5246653-5246672 None:intergenic 40.0%
!! GTTCTTCCATCCTGTTTTGA+CGG + chr1_3:5246812-5246831 Msa0099160:intron 40.0%
GCTTTATGCTTTGGTATGAC+AGG + chr1_3:5246904-5246923 Msa0099160:intron 40.0%
TTTGGTATGACAGGGAACAT+GGG + chr1_3:5246913-5246932 Msa0099160:intron 40.0%
!! CTCTCCGGTTTGAATTTTTC+TGG - chr1_3:5246989-5247008 None:intergenic 40.0%
CAGAAAAATTCAAACCGGAG+AGG + chr1_3:5246987-5247006 Msa0099160:CDS 40.0%
! TACCATTTGGAATTGGTCCA+AGG + chr1_3:5247059-5247078 Msa0099160:CDS 40.0%
! ACCATTTGGAATTGGTCCAA+GGG + chr1_3:5247060-5247079 Msa0099160:CDS 40.0%
AGTAAGCTTGATCTCTTGCA+AGG - chr1_3:5247107-5247126 None:intergenic 40.0%
CATATAGTAAGAGAGGAGGG+GGG - chr1_3:5243985-5244004 None:intergenic 45.0%
CATACTTTGCTAGCAGTGGA+AGG - chr1_3:5244180-5244199 None:intergenic 45.0%
CTTCCACTGCTAGCAAAGTA+TGG + chr1_3:5244178-5244197 Msa0099160:CDS 45.0%
CAAGGACTGAGAAAACGTCA+GGG - chr1_3:5244204-5244223 None:intergenic 45.0%
TCAGTCCTTGCCAAGCAATA+TGG + chr1_3:5244214-5244233 Msa0099160:CDS 45.0%
GTAGATAGGGCCATATTGCT+TGG - chr1_3:5244227-5244246 None:intergenic 45.0%
AGCAATATGGCCCTATCTAC+AGG + chr1_3:5244227-5244246 Msa0099160:CDS 45.0%
GAACTTCAGCCTAGTCATGA+TGG + chr1_3:5244417-5244436 Msa0099160:intron 45.0%
TGAAGAGGAGAAGCAGAGAT+AGG - chr1_3:5244876-5244895 None:intergenic 45.0%
GCTTCTCCTCTTCACCAAAA+AGG + chr1_3:5244882-5244901 Msa0099160:CDS 45.0%
! TTTTCATGTGGATTTCGGGG+TGG + chr1_3:5245245-5245264 Msa0099160:intron 45.0%
TTTCATGTGGATTTCGGGGT+GGG + chr1_3:5245246-5245265 Msa0099160:intron 45.0%
! AGCCTAGCCACTAAGTTGAA+TGG + chr1_3:5245271-5245290 Msa0099160:intron 45.0%
TGCCATTCAACTTAGTGGCT+AGG - chr1_3:5245276-5245295 None:intergenic 45.0%
CATGTCACATGTTTACGTGG+AGG - chr1_3:5245447-5245466 None:intergenic 45.0%
CCACATGTCACATGTTTACG+TGG - chr1_3:5245450-5245469 None:intergenic 45.0%
CCACGTAAACATGTGACATG+TGG + chr1_3:5245447-5245466 Msa0099160:intron 45.0%
! ACAAAGTGTTTGTGGGGTCT+AGG - chr1_3:5245473-5245492 None:intergenic 45.0%
AGTTGGCTAAGTGTGATGGT+TGG - chr1_3:5245600-5245619 None:intergenic 45.0%
!! GCAGCATTTGGTGTCAACTT+TGG + chr1_3:5245739-5245758 Msa0099160:CDS 45.0%
GAAGAGAATACCAGGCACTA+TGG + chr1_3:5245966-5245985 Msa0099160:CDS 45.0%
GAATACCAGGCACTATGGAT+TGG + chr1_3:5245971-5245990 Msa0099160:CDS 45.0%
GATTTACACTGTCTCTCCAC+TGG + chr1_3:5246466-5246485 Msa0099160:CDS 45.0%
GATGTTTCTCTTGCAACCAG+TGG - chr1_3:5246485-5246504 None:intergenic 45.0%
AGGAGGTTACCTTCTTCCAA+AGG + chr1_3:5246520-5246539 Msa0099160:CDS 45.0%
CTTTGGTATGACAGGGAACA+TGG + chr1_3:5246912-5246931 Msa0099160:intron 45.0%
TATGACAGGGAACATGGGTA+TGG + chr1_3:5246918-5246937 Msa0099160:intron 45.0%
ACATGGGTATGGTTAGCACT+TGG + chr1_3:5246929-5246948 Msa0099160:CDS 45.0%
!! CATTTTGGGTCAAACCTCTC+CGG - chr1_3:5247004-5247023 None:intergenic 45.0%
! ATTGGTCCAAGGGCATGTAT+TGG + chr1_3:5247070-5247089 Msa0099160:CDS 45.0%
TTCTGACCAATACATGCCCT+TGG - chr1_3:5247079-5247098 None:intergenic 45.0%
!! TATTTACATATTTATAATTA+AGG + chr1_3:5244923-5244942 Msa0099160:intron 5.0%
CTACAAGAGGCAGAGATGGT+GGG - chr1_3:5244153-5244172 None:intergenic 50.0%
TGTCCTACAAGAGGCAGAGA+TGG - chr1_3:5244157-5244176 None:intergenic 50.0%
!! AGTGGAAGGTGTCCTACAAG+AGG - chr1_3:5244166-5244185 None:intergenic 50.0%
GCAAGGACTGAGAAAACGTC+AGG - chr1_3:5244205-5244224 None:intergenic 50.0%
TAGGGCCATATTGCTTGGCA+AGG - chr1_3:5244222-5244241 None:intergenic 50.0%
! TTGGTGGGTCAGTGTTCTAG+TGG + chr1_3:5244469-5244488 Msa0099160:intron 50.0%
GGAGAGGGAATGCTTCTGTT+TGG - chr1_3:5244855-5244874 None:intergenic 50.0%
GGAGAAGCAGAGATAGGAGA+GGG - chr1_3:5244870-5244889 None:intergenic 50.0%
AGGAGAAGCAGAGATAGGAG+AGG - chr1_3:5244871-5244890 None:intergenic 50.0%
TTCATGTGGATTTCGGGGTG+GGG + chr1_3:5245247-5245266 Msa0099160:intron 50.0%
! TGAACACTTACTTGCCGGCT+CGG + chr1_3:5246170-5246189 Msa0099160:CDS 50.0%
AAAAGATGTGGTAGCCGAGC+CGG - chr1_3:5246187-5246206 None:intergenic 50.0%
! GATTTGGCTTCTCGCAACGT+AGG + chr1_3:5246696-5246715 Msa0099160:intron 50.0%
TCTGGACCGTCAAAACAGGA+TGG - chr1_3:5246821-5246840 None:intergenic 50.0%
GCAATCTGGACCGTCAAAAC+AGG - chr1_3:5246825-5246844 None:intergenic 50.0%
GCCCTTGGACCAATTCCAAA+TGG - chr1_3:5247064-5247083 None:intergenic 50.0%
CCTACAAGAGGCAGAGATGG+TGG - chr1_3:5244154-5244173 None:intergenic 55.0%
CCACCATCTCTGCCTCTTGT+AGG + chr1_3:5244151-5244170 Msa0099160:CDS 55.0%
GGGCCATACTTTGCTAGCAG+TGG - chr1_3:5244184-5244203 None:intergenic 55.0%
!! AGAGGCAGAGATGGTGGGCC+TGG - chr1_3:5244148-5244167 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 5243948 5247216 5243948 ID=Msa0099160;Name=Msa0099160
chr1_3 mRNA 5243948 5247216 5243948 ID=Msa0099160-mRNA-1;Parent=Msa0099160;Name=Msa0099160-mRNA-1;_AED=0.11;_eAED=0.11;_QI=77|0.5|0.42|1|0.5|0.28|7|0|459
chr1_3 exon 5243948 5244248 5243948 ID=Msa0099160-mRNA-1:exon:1874;Parent=Msa0099160-mRNA-1
chr1_3 exon 5244767 5244903 5244767 ID=Msa0099160-mRNA-1:exon:1875;Parent=Msa0099160-mRNA-1
chr1_3 exon 5245653 5245901 5245653 ID=Msa0099160-mRNA-1:exon:1876;Parent=Msa0099160-mRNA-1
chr1_3 exon 5245947 5246136 5245947 ID=Msa0099160-mRNA-1:exon:1877;Parent=Msa0099160-mRNA-1
chr1_3 exon 5246158 5246347 5246158 ID=Msa0099160-mRNA-1:exon:1878;Parent=Msa0099160-mRNA-1
chr1_3 exon 5246446 5246541 5246446 ID=Msa0099160-mRNA-1:exon:1879;Parent=Msa0099160-mRNA-1
chr1_3 exon 5246926 5247216 5246926 ID=Msa0099160-mRNA-1:exon:1880;Parent=Msa0099160-mRNA-1
chr1_3 five_prime_UTR 5243948 5244024 5243948 ID=Msa0099160-mRNA-1:five_prime_utr;Parent=Msa0099160-mRNA-1
chr1_3 CDS 5244025 5244248 5244025 ID=Msa0099160-mRNA-1:cds;Parent=Msa0099160-mRNA-1
chr1_3 CDS 5244767 5244903 5244767 ID=Msa0099160-mRNA-1:cds;Parent=Msa0099160-mRNA-1
chr1_3 CDS 5245653 5245901 5245653 ID=Msa0099160-mRNA-1:cds;Parent=Msa0099160-mRNA-1
chr1_3 CDS 5245947 5246136 5245947 ID=Msa0099160-mRNA-1:cds;Parent=Msa0099160-mRNA-1
chr1_3 CDS 5246158 5246347 5246158 ID=Msa0099160-mRNA-1:cds;Parent=Msa0099160-mRNA-1
chr1_3 CDS 5246446 5246541 5246446 ID=Msa0099160-mRNA-1:cds;Parent=Msa0099160-mRNA-1
chr1_3 CDS 5246926 5247216 5246926 ID=Msa0099160-mRNA-1:cds;Parent=Msa0099160-mRNA-1
Gene Sequence

>Msa0099160

ATGTTATTTATTACTGTAATCTCAAGTGTCCCTTTGGCTTCAACAATATTCATCTTAGTAACTTTAATTGGAGGATTAGTGGGTTATCTCTATTGCCCATTTTGGAAGTTAAGGAAAGTTCCAGGCCCACCATCTCTGCCTCTTGTAGGACACCTTCCACTGCTAGCAAAGTATGGCCCTGACGTTTTCTCAGTCCTTGCCAAGCAATATGGCCCTATCTACAGATTTCATATGGGAAGACAACCTCTTATAATCATAGCAGATGCAGAGCTTTGTAAAGAAGTGGGAATCAAAAAATTCAAAGACATTCCAAACAGAAGCATTCCCTCTCCTATCTCTGCTTCTCCTCTTCACCAAAAAGCAATCCAAAATCTTAATGACACCTCAAAAGAAGACATAATCTTTTCAAATCTTTCCCTAAGACTAGCAACTGATGTTATTGGAGATGCAGCATTTGGTGTCAACTTTGGTCTCTCAAAGCCTCATTCAATTTGTGAATCAATGAACAATGTTAACAATGTAGAACAATCAAGTGCTAATAGTGATGATGTATCAAATTTCATCAATCAACACATTTACTCCACAACACAACTTAAGATGGATTTGTCTGAGCCAATAAGGCAGATTTTGAAGAGAATACCAGGCACTATGGATTGGAAAATTGAGTGTACAAATAAAAATTTAACCGGTCGTCTTGATGATATTGTTAAGAAGAGAATGGAAGTCAAAAGCCGAACTTCGAAGAATTTCTTGTCCCTTATATTGAATGCAAGAGAATCAAAGAGTGTGTCGGAGAATGTTGCCGTTACATATGAACACTTACTTGCCGGCTCGGCTACCACATCTTTTACATTGTCATCTATTGTTTATTTGGTTGCTAGTCATCCAAATGTTGAGGGAAAATTGCTTCGAGAGATTGATGGATTTGGTCCACATGATAAGATACCTAATGCTAAAGATCTCGATGAAAGTTTTCCTTATCTTGATCAGGTGATTAAAGAGGCAATGAGGATTTACACTGTCTCTCCACTGGTTGCAAGAGAAACATCAAATGAAGTAGATATAGGAGGTTACCTTCTTCCAAAGGGAACATGGGTATGGTTAGCACTTGGAGTTTTAGCAAAAGACTCAAGAAACTTTGCAGAGCCAGAAAAATTCAAACCGGAGAGGTTTGACCCAAAATGCGAAGAAATGAAACGAAGGCACCCTTATGCATTCATACCATTTGGAATTGGTCCAAGGGCATGTATTGGTCAGAAATTTTCCTTGCAAGAGATCAAGCTTACTTTAATTCATTTATATAGAAAATATACATTTCGTCATTCACTTGACATGGAAAAACCTGTAGAACTTGAATATGGTTTAGTTCTTAACTTC
Protein sequence

>Msa0099160

MLFITVISSVPLASTIFILVTLIGGLVGYLYCPFWKLRKVPGPPSLPLVGHLPLLAKYGPDVFSVLAKQYGPIYRFHMGRQPLIIIADAELCKEVGIKKFKDIPNRSIPSPISASPLHQKAIQNLNDTSKEDIIFSNLSLRLATDVIGDAAFGVNFGLSKPHSICESMNNVNNVEQSSANSDDVSNFINQHIYSTTQLKMDLSEPIRQILKRIPGTMDWKIECTNKNLTGRLDDIVKKRMEVKSRTSKNFLSLILNARESKSVSENVAVTYEHLLAGSATTSFTLSSIVYLVASHPNVEGKLLREIDGFGPHDKIPNAKDLDESFPYLDQVIKEAMRIYTVSPLVARETSNEVDIGGYLLPKGTWVWLALGVLAKDSRNFAEPEKFKPERFDPKCEEMKRRHPYAFIPFGIGPRACIGQKFSLQEIKLTLIHLYRKYTFRHSLDMEKPVELEYGLVLNF