Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1461690 | XP_003603580.1 | 87.597 | 258 | 24 | 3 | 1 | 258 | 46 | 295 | 2.18e-159 | 454 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1461690 | sp|Q6H500|RSBZ4_ORYSJ | 55.215 | 163 | 70 | 2 | 14 | 174 | 53 | 214 | 1.12e-47 | 162 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1461690 | G7J2W2 | 87.597 | 258 | 24 | 3 | 1 | 258 | 46 | 295 | 1.04e-159 | 454 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1461690 | TF | bZIP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004180 | Msa1461690 | -0.829040 | 6.429098e-55 | -8.615850e-47 |
| Msa0005910 | Msa1461690 | 0.833868 | 4.164957e-56 | -8.615850e-47 |
| Msa0027020 | Msa1461690 | -0.837371 | 5.405838e-57 | -8.615850e-47 |
| Msa0046020 | Msa1461690 | -0.811452 | 6.950666e-51 | -8.615850e-47 |
| Msa0064490 | Msa1461690 | -0.818085 | 2.356424e-52 | -8.615850e-47 |
| Msa0069150 | Msa1461690 | -0.820034 | 8.489751e-53 | -8.615850e-47 |
| Msa0074860 | Msa1461690 | -0.804646 | 1.955143e-49 | -8.615850e-47 |
| Msa0075080 | Msa1461690 | -0.815400 | 9.425591e-52 | -8.615850e-47 |
| Msa0075820 | Msa1461690 | -0.811806 | 5.822018e-51 | -8.615850e-47 |
| Msa0075990 | Msa1461690 | -0.801179 | 1.017327e-48 | -8.615850e-47 |
| Msa0076590 | Msa1461690 | -0.803387 | 3.571917e-49 | -8.615850e-47 |
| Msa0090870 | Msa1461690 | 0.818925 | 1.519482e-52 | -8.615850e-47 |
| Msa0093360 | Msa1461690 | -0.831907 | 1.279326e-55 | -8.615850e-47 |
| Msa0094710 | Msa1461690 | 0.807183 | 5.724939e-50 | -8.615850e-47 |
| Msa0095890 | Msa1461690 | -0.814140 | 1.792728e-51 | -8.615850e-47 |
| Msa0095940 | Msa1461690 | 0.804422 | 2.177032e-49 | -8.615850e-47 |
| Msa0108490 | Msa1461690 | -0.807723 | 4.398337e-50 | -8.615850e-47 |
| Msa0120100 | Msa1461690 | -0.843697 | 1.194907e-58 | -8.615850e-47 |
| Msa0120160 | Msa1461690 | -0.842969 | 1.868410e-58 | -8.615850e-47 |
| Msa1348180 | Msa1461690 | -0.801515 | 8.684212e-49 | -8.615850e-47 |
| Msa1350130 | Msa1461690 | -0.804328 | 2.277633e-49 | -8.615850e-47 |
| Msa1350590 | Msa1461690 | -0.836722 | 7.920753e-57 | -8.615850e-47 |
| Msa1357570 | Msa1461690 | 0.831169 | 1.943565e-55 | -8.615850e-47 |
| Msa1361580 | Msa1461690 | -0.809017 | 2.328912e-50 | -8.615850e-47 |
| Msa1363170 | Msa1461690 | -0.829742 | 4.340762e-55 | -8.615850e-47 |
| Msa1372460 | Msa1461690 | -0.818704 | 1.706148e-52 | -8.615850e-47 |
| Msa1373420 | Msa1461690 | -0.807758 | 4.321766e-50 | -8.615850e-47 |
| Msa1373930 | Msa1461690 | -0.826590 | 2.494929e-54 | -8.615850e-47 |
| Msa1375650 | Msa1461690 | -0.802244 | 6.151081e-49 | -8.615850e-47 |
| Msa1379020 | Msa1461690 | 0.852106 | 5.736449e-61 | -8.615850e-47 |
| Msa1386910 | Msa1461690 | -0.807998 | 3.843900e-50 | -8.615850e-47 |
| Msa1388010 | Msa1461690 | -0.801238 | 9.896412e-49 | -8.615850e-47 |
| Msa1389170 | Msa1461690 | 0.808064 | 3.720939e-50 | -8.615850e-47 |
| Msa1393730 | Msa1461690 | 0.806986 | 6.302210e-50 | -8.615850e-47 |
| Msa1395380 | Msa1461690 | -0.830021 | 3.712191e-55 | -8.615850e-47 |
| Msa1400830 | Msa1461690 | -0.802295 | 6.004147e-49 | -8.615850e-47 |
| Msa1404050 | Msa1461690 | 0.805048 | 1.610873e-49 | -8.615850e-47 |
| Msa1407880 | Msa1461690 | 0.813258 | 2.803315e-51 | -8.615850e-47 |
| Msa1408230 | Msa1461690 | -0.819488 | 1.131405e-52 | -8.615850e-47 |
| Msa1411930 | Msa1461690 | -0.816549 | 5.222894e-52 | -8.615850e-47 |
| Msa1412330 | Msa1461690 | -0.813811 | 2.118382e-51 | -8.615850e-47 |
| Msa1415510 | Msa1461690 | -0.838359 | 3.013996e-57 | -8.615850e-47 |
| Msa1416100 | Msa1461690 | 0.861486 | 9.921976e-64 | -8.615850e-47 |
| Msa1420590 | Msa1461690 | -0.801630 | 8.221917e-49 | -8.615850e-47 |
| Msa1423560 | Msa1461690 | -0.829194 | 5.899690e-55 | -8.615850e-47 |
| Msa1424490 | Msa1461690 | -0.807626 | 4.611482e-50 | -8.615850e-47 |
| Msa1425530 | Msa1461690 | -0.811343 | 7.342074e-51 | -8.615850e-47 |
| Msa1434860 | Msa1461690 | -0.811745 | 6.004877e-51 | -8.615850e-47 |
| Msa1439000 | Msa1461690 | -0.805953 | 1.040662e-49 | -8.615850e-47 |
| Msa1439600 | Msa1461690 | 0.801204 | 1.005625e-48 | -8.615850e-47 |
| Msa1444130 | Msa1461690 | -0.824647 | 7.206399e-54 | -8.615850e-47 |
| Msa1444690 | Msa1461690 | -0.824749 | 6.818322e-54 | -8.615850e-47 |
| Msa1444770 | Msa1461690 | -0.820722 | 5.903792e-53 | -8.615850e-47 |
| Msa1454300 | Msa1461690 | -0.832740 | 7.956269e-56 | -8.615850e-47 |
| Msa1461690 | Msa1461840 | -0.805419 | 1.347014e-49 | -8.615850e-47 |
| Msa1461690 | Msa1462700 | -0.812088 | 5.053749e-51 | -8.615850e-47 |
| Msa0603310 | Msa1461690 | 0.807951 | 3.932788e-50 | -8.615850e-47 |
| Msa0605150 | Msa1461690 | -0.813660 | 2.287328e-51 | -8.615850e-47 |
| Msa0605210 | Msa1461690 | -0.813071 | 3.080932e-51 | -8.615850e-47 |
| Msa0608720 | Msa1461690 | -0.824740 | 6.853993e-54 | -8.615850e-47 |
| Msa0615460 | Msa1461690 | -0.824181 | 9.278644e-54 | -8.615850e-47 |
| Msa0619960 | Msa1461690 | -0.804344 | 2.259557e-49 | -8.615850e-47 |
| Msa0622450 | Msa1461690 | -0.817566 | 3.084992e-52 | -8.615850e-47 |
| Msa0628440 | Msa1461690 | -0.800462 | 1.425260e-48 | -8.615850e-47 |
| Msa0644340 | Msa1461690 | 0.807003 | 6.248310e-50 | -8.615850e-47 |
| Msa0646310 | Msa1461690 | -0.805413 | 1.351016e-49 | -8.615850e-47 |
| Msa0649160 | Msa1461690 | -0.835001 | 2.162873e-56 | -8.615850e-47 |
| Msa0651000 | Msa1461690 | -0.811117 | 8.217163e-51 | -8.615850e-47 |
| Msa0654850 | Msa1461690 | -0.823676 | 1.218356e-53 | -8.615850e-47 |
| Msa0667670 | Msa1461690 | -0.812192 | 4.798318e-51 | -8.615850e-47 |
| Msa0685860 | Msa1461690 | -0.800666 | 1.294880e-48 | -8.615850e-47 |
| Msa0693050 | Msa1461690 | -0.803903 | 2.792026e-49 | -8.615850e-47 |
| Msa0695250 | Msa1461690 | -0.837005 | 6.708188e-57 | -8.615850e-47 |
| Msa0698510 | Msa1461690 | -0.826245 | 3.014939e-54 | -8.615850e-47 |
| Msa0698680 | Msa1461690 | -0.821186 | 4.617006e-53 | -8.615850e-47 |
| Msa0699200 | Msa1461690 | -0.811413 | 7.087532e-51 | -8.615850e-47 |
| Msa0713570 | Msa1461690 | -0.845985 | 2.885583e-59 | -8.615850e-47 |
| Msa0739820 | Msa1461690 | -0.814142 | 1.791416e-51 | -8.615850e-47 |
| Msa0744010 | Msa1461690 | -0.800458 | 1.427789e-48 | -8.615850e-47 |
| Msa0750200 | Msa1461690 | -0.809702 | 1.660243e-50 | -8.615850e-47 |
| Msa0751490 | Msa1461690 | -0.849155 | 3.877788e-60 | -8.615850e-47 |
| Msa0753590 | Msa1461690 | -0.806436 | 8.233938e-50 | -8.615850e-47 |
| Msa0754880 | Msa1461690 | -0.816545 | 5.233082e-52 | -8.615850e-47 |
| Msa0755550 | Msa1461690 | -0.850196 | 1.985407e-60 | -8.615850e-47 |
| Msa0788450 | Msa1461690 | -0.800922 | 1.148109e-48 | -8.615850e-47 |
| Msa0792490 | Msa1461690 | -0.828214 | 1.018137e-54 | -8.615850e-47 |
| Msa0793130 | Msa1461690 | -0.807874 | 4.083468e-50 | -8.615850e-47 |
| Msa0794900 | Msa1461690 | -0.813006 | 3.184287e-51 | -8.615850e-47 |
| Msa0797180 | Msa1461690 | -0.822934 | 1.816359e-53 | -8.615850e-47 |
| Msa0801920 | Msa1461690 | -0.804183 | 2.440679e-49 | -8.615850e-47 |
| Msa0820130 | Msa1461690 | -0.827900 | 1.211776e-54 | -8.615850e-47 |
| Msa0825570 | Msa1461690 | -0.800720 | 1.262560e-48 | -8.615850e-47 |
| Msa0826540 | Msa1461690 | -0.805972 | 1.030888e-49 | -8.615850e-47 |
| Msa0829210 | Msa1461690 | -0.804216 | 2.403022e-49 | -8.615850e-47 |
| Msa0829250 | Msa1461690 | -0.804967 | 1.675300e-49 | -8.615850e-47 |
| Msa0833200 | Msa1461690 | -0.817502 | 3.190588e-52 | -8.615850e-47 |
| Msa0833270 | Msa1461690 | 0.804785 | 1.828322e-49 | -8.615850e-47 |
| Msa0833980 | Msa1461690 | -0.801658 | 8.117435e-49 | -8.615850e-47 |
| Msa0835050 | Msa1461690 | -0.845298 | 4.431725e-59 | -8.615850e-47 |
| Msa0838120 | Msa1461690 | -0.807743 | 4.355186e-50 | -8.615850e-47 |
| Msa0122930 | Msa1461690 | -0.815186 | 1.051674e-51 | -8.615850e-47 |
| Msa0127350 | Msa1461690 | -0.818155 | 2.271445e-52 | -8.615850e-47 |
| Msa0162170 | Msa1461690 | -0.807827 | 4.178991e-50 | -8.615850e-47 |
| Msa0167160 | Msa1461690 | -0.837128 | 6.238234e-57 | -8.615850e-47 |
| Msa0167570 | Msa1461690 | -0.831212 | 1.896725e-55 | -8.615850e-47 |
| Msa0168770 | Msa1461690 | -0.813565 | 2.400748e-51 | -8.615850e-47 |
| Msa0172740 | Msa1461690 | 0.800010 | 1.761554e-48 | -8.615850e-47 |
| Msa0174100 | Msa1461690 | 0.828848 | 7.154593e-55 | -8.615850e-47 |
| Msa0177640 | Msa1461690 | -0.818953 | 1.497515e-52 | -8.615850e-47 |
| Msa0182940 | Msa1461690 | -0.813494 | 2.488044e-51 | -8.615850e-47 |
| Msa0183390 | Msa1461690 | 0.802308 | 5.965940e-49 | -8.615850e-47 |
| Msa0186240 | Msa1461690 | 0.813104 | 3.030943e-51 | -8.615850e-47 |
| Msa0187590 | Msa1461690 | -0.837308 | 5.612388e-57 | -8.615850e-47 |
| Msa0195810 | Msa1461690 | -0.805537 | 1.272741e-49 | -8.615850e-47 |
| Msa0211590 | Msa1461690 | -0.810759 | 9.824555e-51 | -8.615850e-47 |
| Msa0225280 | Msa1461690 | -0.825919 | 3.604384e-54 | -8.615850e-47 |
| Msa0237690 | Msa1461690 | -0.816399 | 5.642442e-52 | -8.615850e-47 |
| Msa1225030 | Msa1461690 | 0.831648 | 1.481876e-55 | -8.615850e-47 |
| Msa1228260 | Msa1461690 | -0.835397 | 1.718870e-56 | -8.615850e-47 |
| Msa1235620 | Msa1461690 | -0.807268 | 5.492384e-50 | -8.615850e-47 |
| Msa1239210 | Msa1461690 | 0.807706 | 4.434521e-50 | -8.615850e-47 |
| Msa1247200 | Msa1461690 | -0.805517 | 1.284799e-49 | -8.615850e-47 |
| Msa1251440 | Msa1461690 | -0.827863 | 1.236667e-54 | -8.615850e-47 |
| Msa1256490 | Msa1461690 | -0.840900 | 6.578636e-58 | -8.615850e-47 |
| Msa1257840 | Msa1461690 | 0.821111 | 4.802690e-53 | -8.615850e-47 |
| Msa1261960 | Msa1461690 | 0.835860 | 1.311758e-56 | -8.615850e-47 |
| Msa1266750 | Msa1461690 | -0.820338 | 7.229840e-53 | -8.615850e-47 |
| Msa1267560 | Msa1461690 | -0.806445 | 8.198765e-50 | -8.615850e-47 |
| Msa1268230 | Msa1461690 | 0.803554 | 3.297690e-49 | -8.615850e-47 |
| Msa1271220 | Msa1461690 | -0.835962 | 1.236596e-56 | -8.615850e-47 |
| Msa1279060 | Msa1461690 | 0.825213 | 5.298731e-54 | -8.615850e-47 |
| Msa1296810 | Msa1461690 | -0.827740 | 1.323645e-54 | -8.615850e-47 |
| Msa1303620 | Msa1461690 | -0.815939 | 7.148247e-52 | -8.615850e-47 |
| Msa1303690 | Msa1461690 | -0.829209 | 5.850376e-55 | -8.615850e-47 |
| Msa1308430 | Msa1461690 | -0.832987 | 6.907297e-56 | -8.615850e-47 |
| Msa1315880 | Msa1461690 | -0.824857 | 6.428885e-54 | -8.615850e-47 |
| Msa1325260 | Msa1461690 | -0.801443 | 8.982730e-49 | -8.615850e-47 |
| Msa1325560 | Msa1461690 | -0.827374 | 1.620819e-54 | -8.615850e-47 |
| Msa1331820 | Msa1461690 | 0.824810 | 6.597126e-54 | -8.615850e-47 |
| Msa1341710 | Msa1461690 | -0.821752 | 3.415664e-53 | -8.615850e-47 |
| Msa1341850 | Msa1461690 | -0.838452 | 2.852061e-57 | -8.615850e-47 |
| Msa0367380 | Msa1461690 | -0.830412 | 2.979471e-55 | -8.615850e-47 |
| Msa0372570 | Msa1461690 | -0.806808 | 6.871341e-50 | -8.615850e-47 |
| Msa0377990 | Msa1461690 | -0.814387 | 1.580952e-51 | -8.615850e-47 |
| Msa0380470 | Msa1461690 | -0.825063 | 5.749031e-54 | -8.615850e-47 |
| Msa0382020 | Msa1461690 | -0.812266 | 4.621871e-51 | -8.615850e-47 |
| Msa0382050 | Msa1461690 | -0.838955 | 2.114663e-57 | -8.615850e-47 |
| Msa0383460 | Msa1461690 | 0.877724 | 4.996215e-69 | -8.615850e-47 |
| Msa0384140 | Msa1461690 | -0.838975 | 2.089413e-57 | -8.615850e-47 |
| Msa0386230 | Msa1461690 | -0.806773 | 6.990260e-50 | -8.615850e-47 |
| Msa0397420 | Msa1461690 | -0.846643 | 1.909390e-59 | -8.615850e-47 |
| Msa0405200 | Msa1461690 | 0.814680 | 1.361606e-51 | -8.615850e-47 |
| Msa0415760 | Msa1461690 | -0.803804 | 2.927496e-49 | -8.615850e-47 |
| Msa0419150 | Msa1461690 | -0.825966 | 3.513678e-54 | -8.615850e-47 |
| Msa0420300 | Msa1461690 | -0.808724 | 2.690235e-50 | -8.615850e-47 |
| Msa0420810 | Msa1461690 | -0.807073 | 6.039077e-50 | -8.615850e-47 |
| Msa0427230 | Msa1461690 | -0.823546 | 1.307020e-53 | -8.615850e-47 |
| Msa0427600 | Msa1461690 | -0.826360 | 2.831677e-54 | -8.615850e-47 |
| Msa0428270 | Msa1461690 | -0.801219 | 9.981936e-49 | -8.615850e-47 |
| Msa0428720 | Msa1461690 | -0.807709 | 4.426699e-50 | -8.615850e-47 |
| Msa0429990 | Msa1461690 | -0.814402 | 1.568922e-51 | -8.615850e-47 |
| Msa0431270 | Msa1461690 | -0.823483 | 1.352108e-53 | -8.615850e-47 |
| Msa0431550 | Msa1461690 | -0.840757 | 7.174408e-58 | -8.615850e-47 |
| Msa0434300 | Msa1461690 | 0.815377 | 9.537421e-52 | -8.615850e-47 |
| Msa0434400 | Msa1461690 | 0.813798 | 2.133212e-51 | -8.615850e-47 |
| Msa0434830 | Msa1461690 | -0.842218 | 2.957494e-58 | -8.615850e-47 |
| Msa0436660 | Msa1461690 | -0.820810 | 5.633203e-53 | -8.615850e-47 |
| Msa0437820 | Msa1461690 | -0.815040 | 1.133266e-51 | -8.615850e-47 |
| Msa0444770 | Msa1461690 | -0.825425 | 4.719552e-54 | -8.615850e-47 |
| Msa0449500 | Msa1461690 | 0.804809 | 1.807147e-49 | -8.615850e-47 |
| Msa0450920 | Msa1461690 | -0.806904 | 6.558543e-50 | -8.615850e-47 |
| Msa0460510 | Msa1461690 | -0.801320 | 9.518470e-49 | -8.615850e-47 |
| Msa0464980 | Msa1461690 | -0.825321 | 4.996216e-54 | -8.615850e-47 |
| Msa0473740 | Msa1461690 | -0.826408 | 2.757983e-54 | -8.615850e-47 |
| Msa0474560 | Msa1461690 | 0.801079 | 1.066444e-48 | -8.615850e-47 |
| Msa0474630 | Msa1461690 | -0.815601 | 8.503305e-52 | -8.615850e-47 |
| Msa0476560 | Msa1461690 | -0.823884 | 1.089147e-53 | -8.615850e-47 |
| Msa0476600 | Msa1461690 | -0.823085 | 1.675049e-53 | -8.615850e-47 |
| Msa0476890 | Msa1461690 | -0.804368 | 2.233970e-49 | -8.615850e-47 |
| Msa0477390 | Msa1461690 | 0.867946 | 9.403377e-66 | -8.615850e-47 |
| Msa0478080 | Msa1461690 | 0.802379 | 5.768665e-49 | -8.615850e-47 |
| Msa0478740 | Msa1461690 | -0.803667 | 3.124828e-49 | -8.615850e-47 |
| Msa0984230 | Msa1461690 | -0.825524 | 4.471842e-54 | -8.615850e-47 |
| Msa1002550 | Msa1461690 | -0.834276 | 3.290668e-56 | -8.615850e-47 |
| Msa1011250 | Msa1461690 | 0.807711 | 4.424157e-50 | -8.615850e-47 |
| Msa1028150 | Msa1461690 | 0.811954 | 5.405644e-51 | -8.615850e-47 |
| Msa1028890 | Msa1461690 | -0.825604 | 4.282375e-54 | -8.615850e-47 |
| Msa1031190 | Msa1461690 | -0.827983 | 1.156956e-54 | -8.615850e-47 |
| Msa1036370 | Msa1461690 | -0.801655 | 8.127099e-49 | -8.615850e-47 |
| Msa1037440 | Msa1461690 | -0.819252 | 1.280718e-52 | -8.615850e-47 |
| Msa1041570 | Msa1461690 | -0.825046 | 5.802713e-54 | -8.615850e-47 |
| Msa1041720 | Msa1461690 | 0.849523 | 3.061109e-60 | -8.615850e-47 |
| Msa1045750 | Msa1461690 | -0.800192 | 1.617193e-48 | -8.615850e-47 |
| Msa1050970 | Msa1461690 | 0.807984 | 3.870083e-50 | -8.615850e-47 |
| Msa1058550 | Msa1461690 | -0.810598 | 1.064344e-50 | -8.615850e-47 |
| Msa1064240 | Msa1461690 | 0.820944 | 5.247015e-53 | -8.615850e-47 |
| Msa1066770 | Msa1461690 | 0.855551 | 5.847256e-62 | -8.615850e-47 |
| Msa1067000 | Msa1461690 | 0.827352 | 1.640087e-54 | -8.615850e-47 |
| Msa1068010 | Msa1461690 | -0.819042 | 1.429489e-52 | -8.615850e-47 |
| Msa1070370 | Msa1461690 | -0.828100 | 1.084597e-54 | -8.615850e-47 |
| Msa1074210 | Msa1461690 | 0.852136 | 5.626060e-61 | -8.615850e-47 |
| Msa1078120 | Msa1461690 | -0.824790 | 6.668598e-54 | -8.615850e-47 |
| Msa1080610 | Msa1461690 | -0.831851 | 1.320739e-55 | -8.615850e-47 |
| Msa1080680 | Msa1461690 | -0.831938 | 1.257077e-55 | -8.615850e-47 |
| Msa1081520 | Msa1461690 | -0.803797 | 2.936048e-49 | -8.615850e-47 |
| Msa0240630 | Msa1461690 | -0.800241 | 1.580416e-48 | -8.615850e-47 |
| Msa0241940 | Msa1461690 | -0.827859 | 1.239406e-54 | -8.615850e-47 |
| Msa0255770 | Msa1461690 | -0.821655 | 3.597237e-53 | -8.615850e-47 |
| Msa0259450 | Msa1461690 | -0.820883 | 5.421421e-53 | -8.615850e-47 |
| Msa0259570 | Msa1461690 | -0.817858 | 2.651418e-52 | -8.615850e-47 |
| Msa0261350 | Msa1461690 | -0.826635 | 2.434401e-54 | -8.615850e-47 |
| Msa0266330 | Msa1461690 | -0.829559 | 4.810429e-55 | -8.615850e-47 |
| Msa0298820 | Msa1461690 | -0.821737 | 3.444550e-53 | -8.615850e-47 |
| Msa0299130 | Msa1461690 | -0.819927 | 8.982278e-53 | -8.615850e-47 |
| Msa0300130 | Msa1461690 | -0.804889 | 1.739450e-49 | -8.615850e-47 |
| Msa0305630 | Msa1461690 | -0.818767 | 1.650899e-52 | -8.615850e-47 |
| Msa0310270 | Msa1461690 | -0.815335 | 9.746814e-52 | -8.615850e-47 |
| Msa0340700 | Msa1461690 | -0.820621 | 6.225712e-53 | -8.615850e-47 |
| Msa0341950 | Msa1461690 | -0.828554 | 8.428570e-55 | -8.615850e-47 |
| Msa0345050 | Msa1461690 | 0.828942 | 6.790983e-55 | -8.615850e-47 |
| Msa0358750 | Msa1461690 | -0.810328 | 1.217595e-50 | -8.615850e-47 |
| Msa1107250 | Msa1461690 | 0.802135 | 6.477697e-49 | -8.615850e-47 |
| Msa1112190 | Msa1461690 | 0.837314 | 5.593671e-57 | -8.615850e-47 |
| Msa1114680 | Msa1461690 | 0.847624 | 1.027886e-59 | -8.615850e-47 |
| Msa1119420 | Msa1461690 | -0.826022 | 3.406397e-54 | -8.615850e-47 |
| Msa1121920 | Msa1461690 | -0.826449 | 2.696737e-54 | -8.615850e-47 |
| Msa1123260 | Msa1461690 | -0.806306 | 8.771435e-50 | -8.615850e-47 |
| Msa1126320 | Msa1461690 | -0.831087 | 2.036463e-55 | -8.615850e-47 |
| Msa1129300 | Msa1461690 | -0.821859 | 3.227489e-53 | -8.615850e-47 |
| Msa1130150 | Msa1461690 | -0.837013 | 6.675962e-57 | -8.615850e-47 |
| Msa1130850 | Msa1461690 | -0.813541 | 2.429247e-51 | -8.615850e-47 |
| Msa1131880 | Msa1461690 | 0.802153 | 6.421080e-49 | -8.615850e-47 |
| Msa1132250 | Msa1461690 | -0.803783 | 2.956453e-49 | -8.615850e-47 |
| Msa1133690 | Msa1461690 | 0.857205 | 1.912531e-62 | -8.615850e-47 |
| Msa1137210 | Msa1461690 | 0.853913 | 1.744708e-61 | -8.615850e-47 |
| Msa1146010 | Msa1461690 | 0.838479 | 2.806209e-57 | -8.615850e-47 |
| Msa1154240 | Msa1461690 | 0.815513 | 8.896446e-52 | -8.615850e-47 |
| Msa1156100 | Msa1461690 | -0.811338 | 7.359075e-51 | -8.615850e-47 |
| Msa1158180 | Msa1461690 | -0.826565 | 2.529681e-54 | -8.615850e-47 |
| Msa1159160 | Msa1461690 | 0.825718 | 4.024011e-54 | -8.615850e-47 |
| Msa1161060 | Msa1461690 | -0.830447 | 2.921833e-55 | -8.615850e-47 |
| Msa1162870 | Msa1461690 | 0.835058 | 2.093209e-56 | -8.615850e-47 |
| Msa1166470 | Msa1461690 | -0.825715 | 4.028979e-54 | -8.615850e-47 |
| Msa1167150 | Msa1461690 | -0.831032 | 2.100528e-55 | -8.615850e-47 |
| Msa1175340 | Msa1461690 | -0.814451 | 1.530804e-51 | -8.615850e-47 |
| Msa1184100 | Msa1461690 | -0.808105 | 3.646268e-50 | -8.615850e-47 |
| Msa1185270 | Msa1461690 | 0.801249 | 9.843693e-49 | -8.615850e-47 |
| Msa1190510 | Msa1461690 | -0.838271 | 3.175892e-57 | -8.615850e-47 |
| Msa1191530 | Msa1461690 | -0.802267 | 6.085312e-49 | -8.615850e-47 |
| Msa1197740 | Msa1461690 | -0.828273 | 9.855707e-55 | -8.615850e-47 |
| Msa1203320 | Msa1461690 | -0.800731 | 1.255854e-48 | -8.615850e-47 |
| Msa1204870 | Msa1461690 | -0.833055 | 6.642022e-56 | -8.615850e-47 |
| Msa1204900 | Msa1461690 | -0.826563 | 2.532307e-54 | -8.615850e-47 |
| Msa1208450 | Msa1461690 | -0.809038 | 2.305174e-50 | -8.615850e-47 |
| Msa1208990 | Msa1461690 | 0.800952 | 1.131900e-48 | -8.615850e-47 |
| Msa1212150 | Msa1461690 | -0.805382 | 1.371583e-49 | -8.615850e-47 |
| Msa0492330 | Msa1461690 | -0.863173 | 3.007489e-64 | -8.615850e-47 |
| Msa0497120 | Msa1461690 | 0.828458 | 8.890803e-55 | -8.615850e-47 |
| Msa0497680 | Msa1461690 | 0.817640 | 2.969228e-52 | -8.615850e-47 |
| Msa0497690 | Msa1461690 | 0.805372 | 1.377900e-49 | -8.615850e-47 |
| Msa0500580 | Msa1461690 | -0.830693 | 2.543387e-55 | -8.615850e-47 |
| Msa0500610 | Msa1461690 | -0.802432 | 5.627377e-49 | -8.615850e-47 |
| Msa0500670 | Msa1461690 | 0.802915 | 4.473504e-49 | -8.615850e-47 |
| Msa0500700 | Msa1461690 | -0.805780 | 1.131309e-49 | -8.615850e-47 |
| Msa0506700 | Msa1461690 | -0.816611 | 5.057595e-52 | -8.615850e-47 |
| Msa0512950 | Msa1461690 | -0.829813 | 4.172811e-55 | -8.615850e-47 |
| Msa0517200 | Msa1461690 | 0.805398 | 1.360788e-49 | -8.615850e-47 |
| Msa0517820 | Msa1461690 | -0.801741 | 7.802503e-49 | -8.615850e-47 |
| Msa0518150 | Msa1461690 | -0.822106 | 2.828536e-53 | -8.615850e-47 |
| Msa0519100 | Msa1461690 | -0.825356 | 4.901137e-54 | -8.615850e-47 |
| Msa0520550 | Msa1461690 | -0.833921 | 4.038874e-56 | -8.615850e-47 |
| Msa0522140 | Msa1461690 | 0.813891 | 2.034785e-51 | -8.615850e-47 |
| Msa0522170 | Msa1461690 | 0.816021 | 6.852981e-52 | -8.615850e-47 |
| Msa0522820 | Msa1461690 | -0.843656 | 1.225147e-58 | -8.615850e-47 |
| Msa0532870 | Msa1461690 | -0.820021 | 8.546280e-53 | -8.615850e-47 |
| Msa0548420 | Msa1461690 | 0.805350 | 1.392746e-49 | -8.615850e-47 |
| Msa0549700 | Msa1461690 | -0.822145 | 2.769808e-53 | -8.615850e-47 |
| Msa0557440 | Msa1461690 | -0.828347 | 9.453978e-55 | -8.615850e-47 |
| Msa0561450 | Msa1461690 | -0.824914 | 6.233955e-54 | -8.615850e-47 |
| Msa0572880 | Msa1461690 | -0.800818 | 1.205597e-48 | -8.615850e-47 |
| Msa0580890 | Msa1461690 | -0.823962 | 1.044385e-53 | -8.615850e-47 |
| Msa0854230 | Msa1461690 | 0.814820 | 1.267783e-51 | -8.615850e-47 |
| Msa0860630 | Msa1461690 | -0.801382 | 9.242952e-49 | -8.615850e-47 |
| Msa0868500 | Msa1461690 | -0.824359 | 8.422738e-54 | -8.615850e-47 |
| Msa0868510 | Msa1461690 | -0.824230 | 9.035360e-54 | -8.615850e-47 |
| Msa0868520 | Msa1461690 | -0.818300 | 2.106317e-52 | -8.615850e-47 |
| Msa0870130 | Msa1461690 | -0.838178 | 3.355136e-57 | -8.615850e-47 |
| Msa0882480 | Msa1461690 | -0.824076 | 9.820092e-54 | -8.615850e-47 |
| Msa0888520 | Msa1461690 | -0.819070 | 1.408429e-52 | -8.615850e-47 |
| Msa0910470 | Msa1461690 | 0.812575 | 3.957877e-51 | -8.615850e-47 |
| Msa0933320 | Msa1461690 | -0.813188 | 2.904630e-51 | -8.615850e-47 |
| Msa0935840 | Msa1461690 | -0.878223 | 3.341985e-69 | -8.615850e-47 |
| Msa0941410 | Msa1461690 | -0.807509 | 4.882217e-50 | -8.615850e-47 |
| Msa0941420 | Msa1461690 | -0.817105 | 3.918745e-52 | -8.615850e-47 |
| Msa0945160 | Msa1461690 | -0.838489 | 2.790503e-57 | -8.615850e-47 |
| Msa0958960 | Msa1461690 | -0.818600 | 1.800738e-52 | -8.615850e-47 |
| Msa0964400 | Msa1461690 | -0.800229 | 1.589769e-48 | -8.615850e-47 |
| Msa0966580 | Msa1461690 | 0.819490 | 1.130003e-52 | -8.615850e-47 |
| Msa0968060 | Msa1461690 | -0.821363 | 4.200924e-53 | -8.615850e-47 |
| Msa0973010 | Msa1461690 | -0.834319 | 3.211442e-56 | -8.615850e-47 |
| Msa0978540 | Msa1461690 | -0.817102 | 3.925136e-52 | -8.615850e-47 |
| Msa0978550 | Msa1461690 | -0.823182 | 1.589238e-53 | -8.615850e-47 |
| Msa0978560 | Msa1461690 | -0.814010 | 1.915480e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1461690 | MtrunA17_Chr3g0139301 | 87.597 | 258 | 24 | 3 | 1 | 258 | 46 | 295 | 2.00e-163 | 454 |
| Msa1461690 | MtrunA17_Chr1g0147491 | 60.300 | 267 | 89 | 10 | 2 | 258 | 80 | 339 | 2.57e-83 | 253 |
| Msa1461690 | MtrunA17_Chr3g0139571 | 82.432 | 74 | 13 | 0 | 83 | 156 | 1 | 74 | 5.56e-31 | 110 |
| Msa1461690 | MtrunA17_Chr1g0190761 | 48.611 | 144 | 67 | 4 | 54 | 194 | 177 | 316 | 1.83e-23 | 98.2 |
| Msa1461690 | MtrunA17_Chr7g0274141 | 50.000 | 138 | 62 | 3 | 34 | 171 | 150 | 280 | 7.12e-22 | 93.6 |
| Msa1461690 | MtrunA17_Chr1g0155551 | 32.203 | 118 | 80 | 0 | 56 | 173 | 2 | 119 | 9.33e-13 | 64.7 |
| Msa1461690 | MtrunA17_Chr8g0341311 | 36.296 | 135 | 69 | 3 | 47 | 172 | 33 | 159 | 5.92e-11 | 60.1 |
| Msa1461690 | MtrunA17_Chr4g0035414 | 35.484 | 93 | 60 | 0 | 71 | 163 | 17 | 109 | 6.74e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1461690 | AT5G24800.1 | 45.148 | 237 | 102 | 9 | 29 | 258 | 62 | 277 | 6.79e-46 | 155 |
| Msa1461690 | AT5G28770.1 | 48.175 | 137 | 65 | 3 | 58 | 194 | 122 | 252 | 4.76e-20 | 87.8 |
| Msa1461690 | AT5G28770.2 | 48.175 | 137 | 65 | 3 | 58 | 194 | 129 | 259 | 4.89e-20 | 87.8 |
| Msa1461690 | AT5G28770.3 | 52.000 | 100 | 46 | 1 | 58 | 157 | 129 | 226 | 9.97e-16 | 75.1 |
| Msa1461690 | AT4G02640.3 | 47.917 | 96 | 47 | 1 | 82 | 177 | 221 | 313 | 1.31e-13 | 70.5 |
| Msa1461690 | AT4G02640.1 | 47.917 | 96 | 47 | 1 | 82 | 177 | 215 | 307 | 1.41e-13 | 70.1 |
| Msa1461690 | AT4G02640.2 | 47.917 | 96 | 47 | 1 | 82 | 177 | 221 | 313 | 1.50e-13 | 70.1 |
| Msa1461690 | AT4G02640.4 | 47.917 | 96 | 47 | 1 | 82 | 177 | 215 | 307 | 1.51e-13 | 70.1 |
| Msa1461690 | AT3G54620.1 | 46.429 | 84 | 45 | 0 | 82 | 165 | 229 | 312 | 2.39e-11 | 63.5 |
Find 53 sgRNAs with CRISPR-Local
Find 176 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAATATTTGGCCTTAATTA+AGG | 0.134054 | tig0041667:+1260 | Msa1461690:exon |
| TTTGGTTTATTAGCTGAAAC+TGG | 0.195300 | tig0041667:-218 | None:intergenic |
| AACACTATACAAACAGTTTA+TGG | 0.233451 | tig0041667:+778 | Msa1461690:CDS |
| TTTGACAGAAATACCTTCTA+TGG | 0.244115 | tig0041667:-352 | None:intergenic |
| CTATGAGTTGTGTAAATATT+TGG | 0.245467 | tig0041667:+1248 | Msa1461690:CDS |
| ATATTATTCTCTTTGTTGTT+TGG | 0.273240 | tig0041667:-236 | None:intergenic |
| AATTCGAATCTTGCTGGGTT+TGG | 0.309808 | tig0041667:+1172 | Msa1461690:CDS |
| TCTTGCTGGGTTTGGAAACT+TGG | 0.316743 | tig0041667:+1180 | Msa1461690:CDS |
| GTGCACAATTCGAATCTTGC+TGG | 0.321584 | tig0041667:+1166 | Msa1461690:CDS |
| TCAAGTGAAACCCTTAATTA+AGG | 0.326188 | tig0041667:-1271 | None:intergenic |
| AAATATTTGGCCTTAATTAA+GGG | 0.379075 | tig0041667:+1261 | Msa1461690:exon |
| ATTTCCCTGCAGGACATTGA+TGG | 0.400011 | tig0041667:-1110 | None:intergenic |
| ATGTGGCATGCGGCGAATAC+TGG | 0.408973 | tig0041667:-1077 | None:intergenic |
| ACAATGATGTCGTCGACAAT+GGG | 0.419225 | tig0041667:+1212 | Msa1461690:CDS |
| TTGATATGAAACGCCATAGA+AGG | 0.425277 | tig0041667:+339 | Msa1461690:CDS |
| GGTGAAGTTAGCTGAGGATA+TGG | 0.427027 | tig0041667:+964 | Msa1461690:intron |
| TTTGTCTGAACTTGAGTCTC+AGG | 0.431765 | tig0041667:+508 | Msa1461690:CDS |
| GCCACACACATAATCTTTCA+TGG | 0.442533 | tig0041667:-1498 | None:intergenic |
| AACCGCAACACCACCGTATG+AGG | 0.448822 | tig0041667:-1140 | None:intergenic |
| TCCGACGAGGATAATGAATC+AGG | 0.453955 | tig0041667:+290 | Msa1461690:CDS |
| TTTCATGGCACTGTATTGAA+TGG | 0.460117 | tig0041667:-1483 | None:intergenic |
| GCCAACCATCAATGTCCTGC+AGG | 0.476677 | tig0041667:+1105 | Msa1461690:CDS |
| TGCACAATTCGAATCTTGCT+GGG | 0.484135 | tig0041667:+1167 | Msa1461690:CDS |
| ACAAAGAGAATAATATCAAA+GGG | 0.493368 | tig0041667:+243 | Msa1461690:CDS |
| CACAACTCATAGCATTGCTT+AGG | 0.501122 | tig0041667:-1237 | None:intergenic |
| TACAATGATGTCGTCGACAA+TGG | 0.501669 | tig0041667:+1211 | Msa1461690:CDS |
| CCCTGCAGGACATTGATGGT+TGG | 0.501779 | tig0041667:-1106 | None:intergenic |
| TTGTCGACGACATCATTGTA+AGG | 0.529396 | tig0041667:-1208 | None:intergenic |
| TTGGTTTATTAGCTGAAACT+GGG | 0.535446 | tig0041667:-217 | None:intergenic |
| AGGCACTATTATTTCCCTGC+AGG | 0.536074 | tig0041667:-1120 | None:intergenic |
| TGTAGAAGCTTTGAGAGCTA+AGG | 0.540256 | tig0041667:+856 | Msa1461690:CDS |
| AACAAAGAGAATAATATCAA+AGG | 0.546304 | tig0041667:+242 | Msa1461690:CDS |
| GGAAATAATAGTGCCTCATA+CGG | 0.548614 | tig0041667:+1127 | Msa1461690:CDS |
| GTGAGTCAGCCAAGAGGTCA+AGG | 0.556802 | tig0041667:+468 | Msa1461690:CDS |
| ACCTGATTCATTATCCTCGT+CGG | 0.562154 | tig0041667:-291 | None:intergenic |
| AAACTGATTGTTTAGTGATG+TGG | 0.571542 | tig0041667:-1005 | None:intergenic |
| GATTCATTATCCTCGTCGGA+TGG | 0.582930 | tig0041667:-287 | None:intergenic |
| TCATACGGTGGTGTTGCGGT+TGG | 0.590129 | tig0041667:+1142 | Msa1461690:CDS |
| AATATCAAAGGGACATCAAG+TGG | 0.598499 | tig0041667:+254 | Msa1461690:CDS |
| TGCCTCATACGGTGGTGTTG+CGG | 0.602335 | tig0041667:+1138 | Msa1461690:CDS |
| AATAATAGTGCCTCATACGG+TGG | 0.620063 | tig0041667:+1130 | Msa1461690:CDS |
| CCAACCATCAATGTCCTGCA+GGG | 0.644784 | tig0041667:+1106 | Msa1461690:CDS |
| TACTAGTCAACAATTTCATG+AGG | 0.659476 | tig0041667:+802 | Msa1461690:CDS |
| GTATTGTATGACAAAGTGAG+AGG | 0.663415 | tig0041667:-1461 | None:intergenic |
| ATAATAGGTGAAGTTAGCTG+AGG | 0.671237 | tig0041667:+958 | Msa1461690:intron |
| AGTCAGCCAAGAGGTCAAGG+TGG | 0.672836 | tig0041667:+471 | Msa1461690:CDS |
| CTGGTAGTCATGTTGAGTTG+TGG | 0.702154 | tig0041667:-1058 | None:intergenic |
| GCCATGAAAGATTATGTGTG+TGG | 0.702858 | tig0041667:+1497 | Msa1461690:three_prime_UTR |
| CTAATTGTGAGTCAGCCAAG+AGG | 0.709587 | tig0041667:+462 | Msa1461690:CDS |
| TTCATCTGATCCATCCGACG+AGG | 0.710432 | tig0041667:+277 | Msa1461690:CDS |
| TTGGCGAAACATGTGGCATG+CGG | 0.727060 | tig0041667:-1087 | None:intergenic |
| CAATGATGTCGTCGACAATG+GGG | 0.731606 | tig0041667:+1213 | Msa1461690:CDS |
| TTGATGGTTGGCGAAACATG+TGG | 0.736785 | tig0041667:-1094 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTACATATGCTATTATAAT+AGG | + | tig0041667:943-962 | Msa1461690:intron | 15.0% |
| !! | TTTACATATGCTATTATAAT+AGG | + | tig0041667:943-962 | Msa1461690:intron | 15.0% |
| !!! | ATATTATTCTCTTTGTTGTT+TGG | - | tig0041667:239-258 | None:intergenic | 20.0% |
| !! | AACAAAGAGAATAATATCAA+AGG | + | tig0041667:242-261 | Msa1461690:CDS | 20.0% |
| !! | ACAAAGAGAATAATATCAAA+GGG | + | tig0041667:243-262 | Msa1461690:CDS | 20.0% |
| !!! | AATTTAGTTTCTGAAATTGT+AGG | + | tig0041667:558-577 | Msa1461690:intron | 20.0% |
| !!! | TAAATATTTGGCCTTAATTA+AGG | + | tig0041667:1260-1279 | Msa1461690:exon | 20.0% |
| !!! | AAATATTTGGCCTTAATTAA+GGG | + | tig0041667:1261-1280 | Msa1461690:exon | 20.0% |
| !!! | ATATTATTCTCTTTGTTGTT+TGG | - | tig0041667:239-258 | None:intergenic | 20.0% |
| !! | AACAAAGAGAATAATATCAA+AGG | + | tig0041667:242-261 | Msa1461690:CDS | 20.0% |
| !! | ACAAAGAGAATAATATCAAA+GGG | + | tig0041667:243-262 | Msa1461690:CDS | 20.0% |
| !!! | AATTTAGTTTCTGAAATTGT+AGG | + | tig0041667:558-577 | Msa1461690:intron | 20.0% |
| !!! | TAAATATTTGGCCTTAATTA+AGG | + | tig0041667:1260-1279 | Msa1461690:exon | 20.0% |
| !!! | AAATATTTGGCCTTAATTAA+GGG | + | tig0041667:1261-1280 | Msa1461690:exon | 20.0% |
| !! | ATACATGTAGTTTGACATTT+TGG | + | tig0041667:166-185 | Msa1461690:intron | 25.0% |
| !! | ATTTTGGATTGAATTGCATA+TGG | + | tig0041667:182-201 | Msa1461690:intron | 25.0% |
| ! | ACAACACTTCTTATTATATG+TGG | + | tig0041667:391-410 | Msa1461690:intron | 25.0% |
| !! | TAATTCTGAGAGAAAATTCT+AGG | + | tig0041667:626-645 | Msa1461690:intron | 25.0% |
| ! | TGAGAGATCAAAATTCAAAT+GGG | - | tig0041667:731-750 | None:intergenic | 25.0% |
| ! | AACACTATACAAACAGTTTA+TGG | + | tig0041667:778-797 | Msa1461690:CDS | 25.0% |
| ! | CTATGAGTTGTGTAAATATT+TGG | + | tig0041667:1248-1267 | Msa1461690:CDS | 25.0% |
| !! | GTTGAACGTTTTGTATAAAA+AGG | + | tig0041667:1379-1398 | Msa1461690:three_prime_UTR | 25.0% |
| !! | ATACATGTAGTTTGACATTT+TGG | + | tig0041667:166-185 | Msa1461690:intron | 25.0% |
| !! | ATTTTGGATTGAATTGCATA+TGG | + | tig0041667:182-201 | Msa1461690:intron | 25.0% |
| ! | ACAACACTTCTTATTATATG+TGG | + | tig0041667:391-410 | Msa1461690:intron | 25.0% |
| !! | TAATTCTGAGAGAAAATTCT+AGG | + | tig0041667:626-645 | Msa1461690:intron | 25.0% |
| ! | TGAGAGATCAAAATTCAAAT+GGG | - | tig0041667:731-750 | None:intergenic | 25.0% |
| ! | AACACTATACAAACAGTTTA+TGG | + | tig0041667:778-797 | Msa1461690:CDS | 25.0% |
| ! | CTATGAGTTGTGTAAATATT+TGG | + | tig0041667:1248-1267 | Msa1461690:CDS | 25.0% |
| !! | GTTGAACGTTTTGTATAAAA+AGG | + | tig0041667:1379-1398 | Msa1461690:three_prime_UTR | 25.0% |
| AATGTCAAACTACATGTATG+AGG | - | tig0041667:165-184 | None:intergenic | 30.0% | |
| TTGGTTTATTAGCTGAAACT+GGG | - | tig0041667:220-239 | None:intergenic | 30.0% | |
| ! | TTTGGTTTATTAGCTGAAAC+TGG | - | tig0041667:221-240 | None:intergenic | 30.0% |
| TTTGACAGAAATACCTTCTA+TGG | - | tig0041667:355-374 | None:intergenic | 30.0% | |
| TGATATAATGATTCGTGACA+TGG | + | tig0041667:425-444 | Msa1461690:intron | 30.0% | |
| ! | CAGGTAACTAATCAATGTTT+TGG | + | tig0041667:527-546 | Msa1461690:intron | 30.0% |
| !! | TAGTTTCTGAAATTGTAGGT+AGG | + | tig0041667:562-581 | Msa1461690:intron | 30.0% |
| CATGCTTCAATTGAAATAGT+AGG | - | tig0041667:655-674 | None:intergenic | 30.0% | |
| CTGAGAGATCAAAATTCAAA+TGG | - | tig0041667:732-751 | None:intergenic | 30.0% | |
| !! | CATTTGAATTTTGATCTCTC+AGG | + | tig0041667:730-749 | Msa1461690:intron | 30.0% |
| TACTAGTCAACAATTTCATG+AGG | + | tig0041667:802-821 | Msa1461690:CDS | 30.0% | |
| AAACTGATTGTTTAGTGATG+TGG | - | tig0041667:1008-1027 | None:intergenic | 30.0% | |
| TCAAGTGAAACCCTTAATTA+AGG | - | tig0041667:1274-1293 | None:intergenic | 30.0% | |
| AATGTCAAACTACATGTATG+AGG | - | tig0041667:165-184 | None:intergenic | 30.0% | |
| TTGGTTTATTAGCTGAAACT+GGG | - | tig0041667:220-239 | None:intergenic | 30.0% | |
| ! | TTTGGTTTATTAGCTGAAAC+TGG | - | tig0041667:221-240 | None:intergenic | 30.0% |
| TTTGACAGAAATACCTTCTA+TGG | - | tig0041667:355-374 | None:intergenic | 30.0% | |
| TGATATAATGATTCGTGACA+TGG | + | tig0041667:425-444 | Msa1461690:intron | 30.0% | |
| ! | CAGGTAACTAATCAATGTTT+TGG | + | tig0041667:527-546 | Msa1461690:intron | 30.0% |
| !! | TAGTTTCTGAAATTGTAGGT+AGG | + | tig0041667:562-581 | Msa1461690:intron | 30.0% |
| CATGCTTCAATTGAAATAGT+AGG | - | tig0041667:655-674 | None:intergenic | 30.0% | |
| CTGAGAGATCAAAATTCAAA+TGG | - | tig0041667:732-751 | None:intergenic | 30.0% | |
| !! | CATTTGAATTTTGATCTCTC+AGG | + | tig0041667:730-749 | Msa1461690:intron | 30.0% |
| TACTAGTCAACAATTTCATG+AGG | + | tig0041667:802-821 | Msa1461690:CDS | 30.0% | |
| AAACTGATTGTTTAGTGATG+TGG | - | tig0041667:1008-1027 | None:intergenic | 30.0% | |
| TCAAGTGAAACCCTTAATTA+AGG | - | tig0041667:1274-1293 | None:intergenic | 30.0% | |
| ! | GTGAGTTCATTTTCAACTTG+TGG | + | tig0041667:4-23 | Msa1461690:CDS | 35.0% |
| ! | AGTTCATTTTCAACTTGTGG+TGG | + | tig0041667:7-26 | Msa1461690:CDS | 35.0% |
| ! | ATGTTTGGGAGTGAAGTTTT+GGG | - | tig0041667:44-63 | None:intergenic | 35.0% |
| ! | AATGTTTGGGAGTGAAGTTT+TGG | - | tig0041667:45-64 | None:intergenic | 35.0% |
| ! | AGAATCAATAGTAGCACTGA+TGG | - | tig0041667:71-90 | None:intergenic | 35.0% |
| GATTCTCAGCCATCTATTTA+TGG | + | tig0041667:85-104 | Msa1461690:CDS | 35.0% | |
| ATACCAGTGCCATAAATAGA+TGG | - | tig0041667:97-116 | None:intergenic | 35.0% | |
| !! | ATTTATGGCACTGGTATGTA+TGG | + | tig0041667:100-119 | Msa1461690:intron | 35.0% |
| AATATCAAAGGGACATCAAG+TGG | + | tig0041667:254-273 | Msa1461690:CDS | 35.0% | |
| TTGATATGAAACGCCATAGA+AGG | + | tig0041667:339-358 | Msa1461690:CDS | 35.0% | |
| CACAATTTGATATCTCATGC+AGG | + | tig0041667:588-607 | Msa1461690:intron | 35.0% | |
| !! | CTACATCTGATTTTAGCACT+CGG | - | tig0041667:841-860 | None:intergenic | 35.0% |
| ATAATAGGTGAAGTTAGCTG+AGG | + | tig0041667:958-977 | Msa1461690:intron | 35.0% | |
| GGAAATAATAGTGCCTCATA+CGG | + | tig0041667:1127-1146 | Msa1461690:CDS | 35.0% | |
| GTATTGTATGACAAAGTGAG+AGG | - | tig0041667:1464-1483 | None:intergenic | 35.0% | |
| TTTCATGGCACTGTATTGAA+TGG | - | tig0041667:1486-1505 | None:intergenic | 35.0% | |
| ! | GTGAGTTCATTTTCAACTTG+TGG | + | tig0041667:4-23 | Msa1461690:CDS | 35.0% |
| ! | AGTTCATTTTCAACTTGTGG+TGG | + | tig0041667:7-26 | Msa1461690:CDS | 35.0% |
| ! | ATGTTTGGGAGTGAAGTTTT+GGG | - | tig0041667:44-63 | None:intergenic | 35.0% |
| ! | AATGTTTGGGAGTGAAGTTT+TGG | - | tig0041667:45-64 | None:intergenic | 35.0% |
| ! | AGAATCAATAGTAGCACTGA+TGG | - | tig0041667:71-90 | None:intergenic | 35.0% |
| GATTCTCAGCCATCTATTTA+TGG | + | tig0041667:85-104 | Msa1461690:CDS | 35.0% | |
| ATACCAGTGCCATAAATAGA+TGG | - | tig0041667:97-116 | None:intergenic | 35.0% | |
| !! | ATTTATGGCACTGGTATGTA+TGG | + | tig0041667:100-119 | Msa1461690:intron | 35.0% |
| AATATCAAAGGGACATCAAG+TGG | + | tig0041667:254-273 | Msa1461690:CDS | 35.0% | |
| TTGATATGAAACGCCATAGA+AGG | + | tig0041667:339-358 | Msa1461690:CDS | 35.0% | |
| CACAATTTGATATCTCATGC+AGG | + | tig0041667:588-607 | Msa1461690:intron | 35.0% | |
| !! | CTACATCTGATTTTAGCACT+CGG | - | tig0041667:841-860 | None:intergenic | 35.0% |
| ATAATAGGTGAAGTTAGCTG+AGG | + | tig0041667:958-977 | Msa1461690:intron | 35.0% | |
| GGAAATAATAGTGCCTCATA+CGG | + | tig0041667:1127-1146 | Msa1461690:CDS | 35.0% | |
| GTATTGTATGACAAAGTGAG+AGG | - | tig0041667:1464-1483 | None:intergenic | 35.0% | |
| TTTCATGGCACTGTATTGAA+TGG | - | tig0041667:1486-1505 | None:intergenic | 35.0% | |
| !! | ATCAATAGTAGCACTGATGG+TGG | - | tig0041667:68-87 | None:intergenic | 40.0% |
| TGAGGAATGTTGAGATGTGT+AGG | - | tig0041667:147-166 | None:intergenic | 40.0% | |
| TGAATTGCATATGGAGCAGT+TGG | + | tig0041667:191-210 | Msa1461690:intron | 40.0% | |
| ACCTGATTCATTATCCTCGT+CGG | - | tig0041667:294-313 | None:intergenic | 40.0% | |
| ATTCGTGACATGGTTTCAGA+AGG | + | tig0041667:435-454 | Msa1461690:intron | 40.0% | |
| TTCGTGACATGGTTTCAGAA+GGG | + | tig0041667:436-455 | Msa1461690:intron | 40.0% | |
| TTTGTCTGAACTTGAGTCTC+AGG | + | tig0041667:508-527 | Msa1461690:CDS | 40.0% | |
| !! | TCAGGTTGAAAAACTGACAC+TGG | + | tig0041667:748-767 | Msa1461690:intron | 40.0% |
| !! | TGTAGAAGCTTTGAGAGCTA+AGG | + | tig0041667:856-875 | Msa1461690:CDS | 40.0% |
| AATAATAGTGCCTCATACGG+TGG | + | tig0041667:1130-1149 | Msa1461690:CDS | 40.0% | |
| TGCACAATTCGAATCTTGCT+GGG | + | tig0041667:1167-1186 | Msa1461690:CDS | 40.0% | |
| AATTCGAATCTTGCTGGGTT+TGG | + | tig0041667:1172-1191 | Msa1461690:CDS | 40.0% | |
| TTGTCGACGACATCATTGTA+AGG | - | tig0041667:1211-1230 | None:intergenic | 40.0% | |
| TACAATGATGTCGTCGACAA+TGG | + | tig0041667:1211-1230 | Msa1461690:CDS | 40.0% | |
| ACAATGATGTCGTCGACAAT+GGG | + | tig0041667:1212-1231 | Msa1461690:CDS | 40.0% | |
| CACAACTCATAGCATTGCTT+AGG | - | tig0041667:1240-1259 | None:intergenic | 40.0% | |
| GCCATGAAAGATTATGTGTG+TGG | + | tig0041667:1497-1516 | Msa1461690:three_prime_UTR | 40.0% | |
| GCCACACACATAATCTTTCA+TGG | - | tig0041667:1501-1520 | None:intergenic | 40.0% | |
| !! | ATCAATAGTAGCACTGATGG+TGG | - | tig0041667:68-87 | None:intergenic | 40.0% |
| TGAGGAATGTTGAGATGTGT+AGG | - | tig0041667:147-166 | None:intergenic | 40.0% | |
| TGAATTGCATATGGAGCAGT+TGG | + | tig0041667:191-210 | Msa1461690:intron | 40.0% | |
| ACCTGATTCATTATCCTCGT+CGG | - | tig0041667:294-313 | None:intergenic | 40.0% | |
| ATTCGTGACATGGTTTCAGA+AGG | + | tig0041667:435-454 | Msa1461690:intron | 40.0% | |
| TTCGTGACATGGTTTCAGAA+GGG | + | tig0041667:436-455 | Msa1461690:intron | 40.0% | |
| TTTGTCTGAACTTGAGTCTC+AGG | + | tig0041667:508-527 | Msa1461690:CDS | 40.0% | |
| !! | TCAGGTTGAAAAACTGACAC+TGG | + | tig0041667:748-767 | Msa1461690:intron | 40.0% |
| !! | TGTAGAAGCTTTGAGAGCTA+AGG | + | tig0041667:856-875 | Msa1461690:CDS | 40.0% |
| AATAATAGTGCCTCATACGG+TGG | + | tig0041667:1130-1149 | Msa1461690:CDS | 40.0% | |
| TGCACAATTCGAATCTTGCT+GGG | + | tig0041667:1167-1186 | Msa1461690:CDS | 40.0% | |
| AATTCGAATCTTGCTGGGTT+TGG | + | tig0041667:1172-1191 | Msa1461690:CDS | 40.0% | |
| TTGTCGACGACATCATTGTA+AGG | - | tig0041667:1211-1230 | None:intergenic | 40.0% | |
| TACAATGATGTCGTCGACAA+TGG | + | tig0041667:1211-1230 | Msa1461690:CDS | 40.0% | |
| ACAATGATGTCGTCGACAAT+GGG | + | tig0041667:1212-1231 | Msa1461690:CDS | 40.0% | |
| CACAACTCATAGCATTGCTT+AGG | - | tig0041667:1240-1259 | None:intergenic | 40.0% | |
| GCCATGAAAGATTATGTGTG+TGG | + | tig0041667:1497-1516 | Msa1461690:three_prime_UTR | 40.0% | |
| GCCACACACATAATCTTTCA+TGG | - | tig0041667:1501-1520 | None:intergenic | 40.0% | |
| !! | GCACTGATGGTGGAATGTTT+GGG | - | tig0041667:58-77 | None:intergenic | 45.0% |
| !! | AGCACTGATGGTGGAATGTT+TGG | - | tig0041667:59-78 | None:intergenic | 45.0% |
| CAGCCATCTATTTATGGCAC+TGG | + | tig0041667:91-110 | Msa1461690:CDS | 45.0% | |
| GATTCATTATCCTCGTCGGA+TGG | - | tig0041667:290-309 | None:intergenic | 45.0% | |
| TCCGACGAGGATAATGAATC+AGG | + | tig0041667:290-309 | Msa1461690:CDS | 45.0% | |
| CTAATTGTGAGTCAGCCAAG+AGG | + | tig0041667:462-481 | Msa1461690:CDS | 45.0% | |
| ! | TTTTCTCCACCTTGACCTCT+TGG | - | tig0041667:480-499 | None:intergenic | 45.0% |
| GGTGAAGTTAGCTGAGGATA+TGG | + | tig0041667:964-983 | Msa1461690:intron | 45.0% | |
| ! | CTGGTAGTCATGTTGAGTTG+TGG | - | tig0041667:1061-1080 | None:intergenic | 45.0% |
| ! | TTGATGGTTGGCGAAACATG+TGG | - | tig0041667:1097-1116 | None:intergenic | 45.0% |
| ATTTCCCTGCAGGACATTGA+TGG | - | tig0041667:1113-1132 | None:intergenic | 45.0% | |
| AGGCACTATTATTTCCCTGC+AGG | - | tig0041667:1123-1142 | None:intergenic | 45.0% | |
| GTGCACAATTCGAATCTTGC+TGG | + | tig0041667:1166-1185 | Msa1461690:CDS | 45.0% | |
| TCTTGCTGGGTTTGGAAACT+TGG | + | tig0041667:1180-1199 | Msa1461690:CDS | 45.0% | |
| CAATGATGTCGTCGACAATG+GGG | + | tig0041667:1213-1232 | Msa1461690:CDS | 45.0% | |
| !! | GCACTGATGGTGGAATGTTT+GGG | - | tig0041667:58-77 | None:intergenic | 45.0% |
| !! | AGCACTGATGGTGGAATGTT+TGG | - | tig0041667:59-78 | None:intergenic | 45.0% |
| CAGCCATCTATTTATGGCAC+TGG | + | tig0041667:91-110 | Msa1461690:CDS | 45.0% | |
| GATTCATTATCCTCGTCGGA+TGG | - | tig0041667:290-309 | None:intergenic | 45.0% | |
| TCCGACGAGGATAATGAATC+AGG | + | tig0041667:290-309 | Msa1461690:CDS | 45.0% | |
| CTAATTGTGAGTCAGCCAAG+AGG | + | tig0041667:462-481 | Msa1461690:CDS | 45.0% | |
| ! | TTTTCTCCACCTTGACCTCT+TGG | - | tig0041667:480-499 | None:intergenic | 45.0% |
| GGTGAAGTTAGCTGAGGATA+TGG | + | tig0041667:964-983 | Msa1461690:intron | 45.0% | |
| ! | CTGGTAGTCATGTTGAGTTG+TGG | - | tig0041667:1061-1080 | None:intergenic | 45.0% |
| ! | TTGATGGTTGGCGAAACATG+TGG | - | tig0041667:1097-1116 | None:intergenic | 45.0% |
| ATTTCCCTGCAGGACATTGA+TGG | - | tig0041667:1113-1132 | None:intergenic | 45.0% | |
| AGGCACTATTATTTCCCTGC+AGG | - | tig0041667:1123-1142 | None:intergenic | 45.0% | |
| GTGCACAATTCGAATCTTGC+TGG | + | tig0041667:1166-1185 | Msa1461690:CDS | 45.0% | |
| TCTTGCTGGGTTTGGAAACT+TGG | + | tig0041667:1180-1199 | Msa1461690:CDS | 45.0% | |
| CAATGATGTCGTCGACAATG+GGG | + | tig0041667:1213-1232 | Msa1461690:CDS | 45.0% | |
| TTCATCTGATCCATCCGACG+AGG | + | tig0041667:277-296 | Msa1461690:CDS | 50.0% | |
| TTGGCGAAACATGTGGCATG+CGG | - | tig0041667:1090-1109 | None:intergenic | 50.0% | |
| CCAACCATCAATGTCCTGCA+GGG | + | tig0041667:1106-1125 | Msa1461690:CDS | 50.0% | |
| TTCATCTGATCCATCCGACG+AGG | + | tig0041667:277-296 | Msa1461690:CDS | 50.0% | |
| TTGGCGAAACATGTGGCATG+CGG | - | tig0041667:1090-1109 | None:intergenic | 50.0% | |
| CCAACCATCAATGTCCTGCA+GGG | + | tig0041667:1106-1125 | Msa1461690:CDS | 50.0% | |
| GTGAGTCAGCCAAGAGGTCA+AGG | + | tig0041667:468-487 | Msa1461690:CDS | 55.0% | |
| AGTCAGCCAAGAGGTCAAGG+TGG | + | tig0041667:471-490 | Msa1461690:CDS | 55.0% | |
| ATGTGGCATGCGGCGAATAC+TGG | - | tig0041667:1080-1099 | None:intergenic | 55.0% | |
| GCCAACCATCAATGTCCTGC+AGG | + | tig0041667:1105-1124 | Msa1461690:CDS | 55.0% | |
| ! | CCCTGCAGGACATTGATGGT+TGG | - | tig0041667:1109-1128 | None:intergenic | 55.0% |
| ! | TGCCTCATACGGTGGTGTTG+CGG | + | tig0041667:1138-1157 | Msa1461690:CDS | 55.0% |
| AACCGCAACACCACCGTATG+AGG | - | tig0041667:1143-1162 | None:intergenic | 55.0% | |
| !! | TCATACGGTGGTGTTGCGGT+TGG | + | tig0041667:1142-1161 | Msa1461690:CDS | 55.0% |
| GTGAGTCAGCCAAGAGGTCA+AGG | + | tig0041667:468-487 | Msa1461690:CDS | 55.0% | |
| AGTCAGCCAAGAGGTCAAGG+TGG | + | tig0041667:471-490 | Msa1461690:CDS | 55.0% | |
| ATGTGGCATGCGGCGAATAC+TGG | - | tig0041667:1080-1099 | None:intergenic | 55.0% | |
| GCCAACCATCAATGTCCTGC+AGG | + | tig0041667:1105-1124 | Msa1461690:CDS | 55.0% | |
| ! | CCCTGCAGGACATTGATGGT+TGG | - | tig0041667:1109-1128 | None:intergenic | 55.0% |
| ! | TGCCTCATACGGTGGTGTTG+CGG | + | tig0041667:1138-1157 | Msa1461690:CDS | 55.0% |
| AACCGCAACACCACCGTATG+AGG | - | tig0041667:1143-1162 | None:intergenic | 55.0% | |
| !! | TCATACGGTGGTGTTGCGGT+TGG | + | tig0041667:1142-1161 | Msa1461690:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0041667 | gene | 1 | 1535 | 1 | ID=Msa1461690;Name=Msa1461690 |
| tig0041667 | mRNA | 1 | 1535 | 1 | ID=Msa1461690-mRNA-1;Parent=Msa1461690;Name=Msa1461690-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|1|1|1|1|1|5|259|258 |
| tig0041667 | exon | 1 | 112 | 1 | ID=Msa1461690-mRNA-1:exon:23289;Parent=Msa1461690-mRNA-1 |
| tig0041667 | exon | 210 | 360 | 210 | ID=Msa1461690-mRNA-1:exon:23290;Parent=Msa1461690-mRNA-1 |
| tig0041667 | exon | 454 | 529 | 454 | ID=Msa1461690-mRNA-1:exon:23291;Parent=Msa1461690-mRNA-1 |
| tig0041667 | exon | 752 | 877 | 752 | ID=Msa1461690-mRNA-1:exon:23292;Parent=Msa1461690-mRNA-1 |
| tig0041667 | exon | 965 | 1535 | 965 | ID=Msa1461690-mRNA-1:exon:23293;Parent=Msa1461690-mRNA-1 |
| tig0041667 | CDS | 1 | 112 | 1 | ID=Msa1461690-mRNA-1:cds;Parent=Msa1461690-mRNA-1 |
| tig0041667 | CDS | 210 | 360 | 210 | ID=Msa1461690-mRNA-1:cds;Parent=Msa1461690-mRNA-1 |
| tig0041667 | CDS | 454 | 529 | 454 | ID=Msa1461690-mRNA-1:cds;Parent=Msa1461690-mRNA-1 |
| tig0041667 | CDS | 752 | 877 | 752 | ID=Msa1461690-mRNA-1:cds;Parent=Msa1461690-mRNA-1 |
| tig0041667 | CDS | 965 | 1276 | 965 | ID=Msa1461690-mRNA-1:cds;Parent=Msa1461690-mRNA-1 |
| tig0041667 | three_prime_UTR | 1277 | 1535 | 1277 | ID=Msa1461690-mRNA-1:three_prime_utr;Parent=Msa1461690-mRNA-1 |
| Gene Sequence |
| Protein sequence |
