Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1258840 | XP_003608913.2 | 99.004 | 703 | 7 | 0 | 1 | 703 | 1 | 703 | 0.0 | 1419 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1258840 | sp|Q94BR1|MRF1_ARATH | 75.356 | 702 | 169 | 4 | 1 | 700 | 1 | 700 | 0.0 | 1064 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1258840 | G7JNQ7 | 99.004 | 703 | 7 | 0 | 1 | 703 | 1 | 703 | 0.0 | 1419 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0026780 | Msa1258840 | 0.802736 | 4.869145e-49 | -8.615850e-47 |
| Msa0688610 | Msa1258840 | 0.832033 | 1.190958e-55 | -8.615850e-47 |
| Msa0750530 | Msa1258840 | 0.807204 | 5.667272e-50 | -8.615850e-47 |
| Msa1258840 | Msa1330220 | 0.993855 | 1.011062e-202 | -8.615850e-47 |
| Msa1258840 | Msa1369830 | 0.965458 | 1.245771e-124 | -8.615850e-47 |
| Msa1071420 | Msa1258840 | 0.837087 | 6.393171e-57 | -8.615850e-47 |
| Msa0316140 | Msa1258840 | 0.801981 | 6.967711e-49 | -8.615850e-47 |
| Msa1208530 | Msa1258840 | 0.954825 | 1.233904e-112 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1258840 | MtrunA17_Chr4g0058021 | 99.004 | 703 | 7 | 0 | 1 | 703 | 1 | 703 | 0.0 | 1419 |
| Msa1258840 | MtrunA17_Chr6g0465321 | 56.592 | 622 | 256 | 5 | 86 | 696 | 22 | 640 | 0.0 | 684 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1258840 | AT5G63190.2 | 75.356 | 702 | 169 | 4 | 1 | 700 | 1 | 700 | 0.0 | 1064 |
| Msa1258840 | AT5G63190.1 | 75.356 | 702 | 169 | 4 | 1 | 700 | 1 | 700 | 0.0 | 1064 |
| Msa1258840 | AT4G24800.4 | 74.856 | 696 | 171 | 3 | 5 | 699 | 2 | 694 | 0.0 | 1025 |
| Msa1258840 | AT4G24800.1 | 74.856 | 696 | 171 | 3 | 5 | 699 | 2 | 694 | 0.0 | 1025 |
| Msa1258840 | AT4G24800.3 | 74.856 | 696 | 171 | 3 | 5 | 699 | 2 | 694 | 0.0 | 1025 |
| Msa1258840 | AT4G24800.2 | 74.856 | 696 | 171 | 3 | 5 | 699 | 2 | 694 | 0.0 | 1025 |
| Msa1258840 | AT3G48390.1 | 72.442 | 606 | 162 | 2 | 96 | 700 | 30 | 631 | 0.0 | 900 |
| Msa1258840 | AT1G22730.1 | 50.000 | 642 | 285 | 9 | 78 | 698 | 51 | 677 | 0.0 | 599 |
Find 246 sgRNAs with CRISPR-Local
Find 387 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCAATCCAGCTGGTGAAAA+TGG | 0.176893 | 8_2:-60113751 | Msa1258840:CDS |
| ACCTCGCCACTATCATAATT+TGG | 0.193734 | 8_2:+60114983 | None:intergenic |
| TCAACAGAGGATATTGTTAA+TGG | 0.233545 | 8_2:-60113490 | Msa1258840:CDS |
| TTCTCTCACACCACCGTTTA+GGG | 0.264837 | 8_2:-60116981 | Msa1258840:five_prime_UTR |
| GTTTCACTACCACTGCATTT+TGG | 0.266094 | 8_2:+60113322 | None:intergenic |
| TTTCTCTCACACCACCGTTT+AGG | 0.281492 | 8_2:-60116982 | Msa1258840:five_prime_UTR |
| TCCTGTCTTGGCTCGAGATC+CGG | 0.290952 | 8_2:-60116896 | Msa1258840:five_prime_UTR |
| GTGCTGGTGGTAAGGGCACT+TGG | 0.296945 | 8_2:-60115054 | Msa1258840:CDS |
| CAGTAATGGGGATGTTGATT+TGG | 0.304435 | 8_2:-60114550 | Msa1258840:CDS |
| CGGTCGCATTCTGGAAAGTT+AGG | 0.310044 | 8_2:-60116321 | Msa1258840:CDS |
| CGTTGTTGCAGTTTCCGATT+TGG | 0.319807 | 8_2:-60116935 | Msa1258840:five_prime_UTR |
| TCAAACTAAACTTGATCTAA+TGG | 0.320789 | 8_2:+60112584 | None:intergenic |
| TAAAGGATTCACCCGGATTA+AGG | 0.323279 | 8_2:-60112990 | Msa1258840:CDS |
| TTCCACCAGCCTTTCTTGCC+AGG | 0.329884 | 8_2:-60114257 | Msa1258840:CDS |
| TGACATCCTTGCTTTATTCC+TGG | 0.334192 | 8_2:-60114304 | Msa1258840:CDS |
| ACGTGACGTGTTTGTGTTAT+TGG | 0.336667 | 8_2:-60116534 | Msa1258840:five_prime_UTR |
| CGTGACGTGTTTGTGTTATT+GGG | 0.337853 | 8_2:-60116533 | Msa1258840:five_prime_UTR |
| TAGATGAATACTTCAGTAAT+GGG | 0.339593 | 8_2:-60114563 | Msa1258840:CDS |
| TGCTGGTGGTAAGGGCACTT+GGG | 0.342359 | 8_2:-60115053 | Msa1258840:CDS |
| GAGGTTAATAACACTTGCTT+TGG | 0.344003 | 8_2:-60113578 | Msa1258840:CDS |
| ACAAGTCGCTTAATGAAGTA+TGG | 0.352741 | 8_2:+60114486 | None:intergenic |
| CCATTGAAGATGGGATAATC+TGG | 0.355011 | 8_2:-60112815 | Msa1258840:three_prime_UTR |
| CAGGGCAAGGAAGGCTCTTC+CGG | 0.356489 | 8_2:-60114238 | Msa1258840:CDS |
| CACTGAGGTTCCTGTTACTT+CGG | 0.357470 | 8_2:-60112730 | Msa1258840:three_prime_UTR |
| GCTGGTGGTAAGGGCACTTG+GGG | 0.362041 | 8_2:-60115052 | Msa1258840:CDS |
| CACTTGAGCCAAGTTCTCTT+AGG | 0.362449 | 8_2:+60114517 | None:intergenic |
| TTTACAATGACCGAAGTAAC+AGG | 0.366531 | 8_2:+60112720 | None:intergenic |
| AGATACAACGCTGGATATAC+TGG | 0.366558 | 8_2:-60113440 | Msa1258840:CDS |
| CCATTGAACTTGGATGAAAT+TGG | 0.368898 | 8_2:-60113358 | Msa1258840:CDS |
| CATTAGTCCCACACAGATTA+GGG | 0.370644 | 8_2:-60114388 | Msa1258840:CDS |
| ATGAAAATGCAAATCGGAAC+TGG | 0.379767 | 8_2:+60116856 | None:intergenic |
| CTTAAAGAATATGTTGATAG+TGG | 0.380631 | 8_2:-60114072 | Msa1258840:CDS |
| TCATTAGTCCCACACAGATT+AGG | 0.381188 | 8_2:-60114389 | Msa1258840:CDS |
| AGTAGTTCCAACCAGCTCAT+AGG | 0.384481 | 8_2:+60114632 | None:intergenic |
| GAATGTGAGGAAGTACAAAA+AGG | 0.386583 | 8_2:-60113707 | Msa1258840:CDS |
| TCTAGGCTTCGAATGAGTTC+AGG | 0.390486 | 8_2:+60113640 | None:intergenic |
| CCAATCCAGCTGGTGAAAAT+GGG | 0.390549 | 8_2:-60113750 | Msa1258840:CDS |
| GGCTATTGAGATGCTGGGGC+GGG | 0.391205 | 8_2:-60113252 | Msa1258840:CDS |
| CATCAAGACCCTCCTTAATC+CGG | 0.394068 | 8_2:+60112978 | None:intergenic |
| GAGAAAACCCTTTCACCATT+TGG | 0.394077 | 8_2:+60113884 | None:intergenic |
| CCAATTTCATCCAAGTTCAA+TGG | 0.400298 | 8_2:+60113358 | None:intergenic |
| CCTGTCTTGGCTCGAGATCC+GGG | 0.403205 | 8_2:-60116895 | Msa1258840:five_prime_UTR |
| GTGAAAGGCTATTGAGATGC+TGG | 0.406948 | 8_2:-60113258 | Msa1258840:CDS |
| CTTCCTTGCCCTGGCAAGAA+AGG | 0.407487 | 8_2:+60114248 | None:intergenic |
| CATCCTTCAGATATTGCCTT+GGG | 0.409887 | 8_2:+60113790 | None:intergenic |
| GGGAACTGGATGGGCTGTGG+AGG | 0.411357 | 8_2:-60113230 | Msa1258840:CDS |
| CAATTTCATCCAAGTTCAAT+GGG | 0.413224 | 8_2:+60113359 | None:intergenic |
| TCAGCTCCCTTGGAAGATTC+CGG | 0.416092 | 8_2:+60114219 | None:intergenic |
| TCCACTGTCTTCTCCTGTCT+TGG | 0.416678 | 8_2:-60116908 | Msa1258840:five_prime_UTR |
| CTTGCCCTGGCAAGAAAGGC+TGG | 0.425041 | 8_2:+60114252 | None:intergenic |
| AAAGTTAGGGCGGGCTAAGA+AGG | 0.432147 | 8_2:-60116307 | Msa1258840:CDS |
| CCAGATTATCCCATCTTCAA+TGG | 0.433032 | 8_2:+60112815 | None:intergenic |
| TAAGGAGGGTCTTGATGATC+TGG | 0.435168 | 8_2:-60112972 | Msa1258840:CDS |
| GGTGGTAAGGCACAGACTGC+TGG | 0.438468 | 8_2:-60116366 | Msa1258840:CDS |
| CAGGTGCTCCAAGATCTTCT+AGG | 0.438853 | 8_2:+60113623 | None:intergenic |
| CTTGACTACCTCAGCTCCCT+TGG | 0.439299 | 8_2:+60114209 | None:intergenic |
| AAACCCTTTCACCATTTGGC+TGG | 0.441435 | 8_2:+60113888 | None:intergenic |
| AGTTTGAAAGATATATCAAT+TGG | 0.443081 | 8_2:-60112568 | Msa1258840:three_prime_UTR |
| TGCAGATGGTGCTGGTGGTA+AGG | 0.445986 | 8_2:-60115062 | Msa1258840:intron |
| CATTTACTCTCTCTGGATGA+AGG | 0.447288 | 8_2:-60112631 | Msa1258840:three_prime_UTR |
| ATGTCAAGTAAAAGAGCAAA+TGG | 0.449255 | 8_2:+60112771 | None:intergenic |
| CCATGGAGAAGAAGAATGAT+AGG | 0.451295 | 8_2:-60113072 | Msa1258840:CDS |
| CTCTCTTCTGCTCGTCATGC+AGG | 0.451990 | 8_2:-60113280 | Msa1258840:CDS |
| TTTAACAGCTTCAACAGTAA+AGG | 0.452533 | 8_2:+60113940 | None:intergenic |
| ATTCGAAGCCTAGAAGATCT+TGG | 0.457110 | 8_2:-60113631 | Msa1258840:CDS |
| TACTGAAGTATTCATCTATG+AGG | 0.457447 | 8_2:+60114568 | None:intergenic |
| TGTACTTGCCCCATTGAACT+TGG | 0.458146 | 8_2:-60113368 | Msa1258840:CDS |
| TGTTTGTGTTATTGGGGAAA+TGG | 0.461990 | 8_2:-60116526 | Msa1258840:exon |
| AATGATCCAAATTATGATAG+TGG | 0.464061 | 8_2:-60114989 | Msa1258840:CDS |
| GAACTGGAATCTTCTGTGCT+TGG | 0.465184 | 8_2:+60116872 | None:intergenic |
| AACTACTGTTACTGACCCCT+TGG | 0.468009 | 8_2:-60114616 | Msa1258840:CDS |
| GCTTCCTTTGCCAATCCAGC+TGG | 0.468039 | 8_2:-60113760 | Msa1258840:CDS |
| AGTGAAGAAAGCTTTGGTTA+TGG | 0.470878 | 8_2:-60113095 | Msa1258840:CDS |
| CTTTCTTGCCAGGGCAAGGA+AGG | 0.472429 | 8_2:-60114247 | Msa1258840:CDS |
| GAATCTCCATGGCAAGTACC+AGG | 0.474177 | 8_2:+60113974 | None:intergenic |
| TCACATTCTCATCTTCAACT+TGG | 0.474950 | 8_2:+60113722 | None:intergenic |
| CAAAGCTCCTGCTGGTGGTA+AGG | 0.478498 | 8_2:-60116379 | Msa1258840:CDS |
| GGGTCTTGATGATCTGGCTC+TGG | 0.479384 | 8_2:-60112966 | Msa1258840:CDS |
| GCTATTGAGATGCTGGGGCG+GGG | 0.479576 | 8_2:-60113251 | Msa1258840:CDS |
| GGCAATGGACAGGCATGATA+AGG | 0.480888 | 8_2:-60114457 | Msa1258840:CDS |
| CCATCACGAGGTTGTGAAGA+AGG | 0.481692 | 8_2:-60113998 | Msa1258840:CDS |
| CCCGGATCTCGAGCCAAGAC+AGG | 0.482662 | 8_2:+60116895 | None:intergenic |
| GCAGATGGTGCTGGTGGTAA+GGG | 0.484044 | 8_2:-60115061 | Msa1258840:intron |
| TGCCAGTGTATTCGTGACTT+GGG | 0.484187 | 8_2:-60113142 | Msa1258840:CDS |
| CGGAAGAGCCTTCCTTGCCC+TGG | 0.485045 | 8_2:+60114239 | None:intergenic |
| TGTTGTCCTCCCATTGAAGA+TGG | 0.487299 | 8_2:-60112825 | Msa1258840:three_prime_UTR |
| TCCACCAGCCTTTCTTGCCA+GGG | 0.488180 | 8_2:-60114256 | Msa1258840:CDS |
| TGCTTTCTTGAATTCATCCA+AGG | 0.489968 | 8_2:+60114599 | None:intergenic |
| TGAGGTAGTGAAGAAAGCTT+TGG | 0.490667 | 8_2:-60113101 | Msa1258840:CDS |
| GCGACTTGTTTCCATGGCAA+TGG | 0.493441 | 8_2:-60114472 | Msa1258840:CDS |
| GAATCCTTTAGTCAGCTGAT+TGG | 0.493942 | 8_2:+60113003 | None:intergenic |
| TGATCTTGCAGTGGATATCC+TGG | 0.494069 | 8_2:-60114334 | Msa1258840:CDS |
| GAAAGCTTTGGTTATGGCCA+TGG | 0.496815 | 8_2:-60113089 | Msa1258840:CDS |
| GGTCGCATTCTGGAAAGTTA+GGG | 0.496864 | 8_2:-60116320 | Msa1258840:CDS |
| CTGCAGGAGTGCTTCAGTGA+AGG | 0.497405 | 8_2:-60113037 | Msa1258840:CDS |
| GTTTCTGTCATTTGTCCCCA+AGG | 0.498120 | 8_2:-60113806 | Msa1258840:CDS |
| CCTATCATTCTTCTTCTCCA+TGG | 0.499101 | 8_2:+60113072 | None:intergenic |
| AGTGAAATGAAAATGCAAAT+CGG | 0.499101 | 8_2:+60116850 | None:intergenic |
| ATGCCAGTGTATTCGTGACT+TGG | 0.499296 | 8_2:-60113143 | Msa1258840:CDS |
| GGAATCTTCTGTGCTTGGCC+CGG | 0.500460 | 8_2:+60116877 | None:intergenic |
| GAAGAAGAATGATAGGATGC+TGG | 0.500749 | 8_2:-60113065 | Msa1258840:CDS |
| GGACAAGATCACAAAGCTCT+TGG | 0.504142 | 8_2:-60113200 | Msa1258840:CDS |
| TTGCTAGACATCTGGGGCAG+AGG | 0.506298 | 8_2:+60112862 | None:intergenic |
| TTTATAGGAACCCTATGAGC+TGG | 0.506672 | 8_2:-60114643 | Msa1258840:intron |
| AAAGAACAGAGAAAAGGAAA+TGG | 0.507361 | 8_2:-60113551 | Msa1258840:CDS |
| CAGCCTTTCTTGCCAGGGCA+AGG | 0.508041 | 8_2:-60114251 | Msa1258840:CDS |
| GCATCTGACCTAAGAGAACT+TGG | 0.508510 | 8_2:-60114525 | Msa1258840:CDS |
| ATAGATGAATACTTCAGTAA+TGG | 0.511492 | 8_2:-60114564 | Msa1258840:CDS |
| TGTAGGTGTATACGTGAGTT+GGG | 0.511836 | 8_2:-60114033 | Msa1258840:CDS |
| TTGTTTCCATGGCAATGGAC+AGG | 0.512207 | 8_2:-60114467 | Msa1258840:CDS |
| GTAGTTCCAACCAGCTCATA+GGG | 0.512875 | 8_2:+60114633 | None:intergenic |
| CTTGTGGATGCAGATGGTGC+TGG | 0.513272 | 8_2:-60115070 | Msa1258840:intron |
| TCCACAAGTTCTGCATGGTG+TGG | 0.514197 | 8_2:+60114159 | None:intergenic |
| GTTCCAGCCAAATGGTGAAA+GGG | 0.516399 | 8_2:-60113891 | Msa1258840:CDS |
| CAGATTATCCCATCTTCAAT+GGG | 0.516688 | 8_2:+60112816 | None:intergenic |
| ACTGATTAGTTCCAGCCAAA+TGG | 0.516854 | 8_2:-60113899 | Msa1258840:CDS |
| CAACTCACGTATACACCTAC+AGG | 0.516859 | 8_2:+60114035 | None:intergenic |
| AAGAATATCGAAACCCTAAA+CGG | 0.517598 | 8_2:+60116968 | None:intergenic |
| GGCTCTTCCGGAATCTTCCA+AGG | 0.517641 | 8_2:-60114226 | Msa1258840:CDS |
| GCATGATAAGGAGAAAGAAA+TGG | 0.518042 | 8_2:-60114445 | Msa1258840:CDS |
| AACAGTAAAGGTTCTGCTGA+AGG | 0.520154 | 8_2:+60113952 | None:intergenic |
| TCTCTGGATGAAGGGTCTGT+TGG | 0.520349 | 8_2:-60112622 | Msa1258840:three_prime_UTR |
| AATGGGAGGACAACATGCCC+TGG | 0.520676 | 8_2:+60112833 | None:intergenic |
| CTATATGAAGTGCAGATAGC+AGG | 0.521385 | 8_2:+60113521 | None:intergenic |
| CCATCCTTCAGATATTGCCT+TGG | 0.522923 | 8_2:+60113789 | None:intergenic |
| AGCTGAGAGATAGCTCTTCT+CGG | 0.523111 | 8_2:+60114182 | None:intergenic |
| TATCAAGAGCAAGATCATCT+AGG | 0.523207 | 8_2:+60113848 | None:intergenic |
| GGACCGAAAGAACAGAGAAA+AGG | 0.523465 | 8_2:-60113557 | Msa1258840:CDS |
| CTATTGAGATGCTGGGGCGG+GGG | 0.523618 | 8_2:-60113250 | Msa1258840:CDS |
| AGCAATGTCGACGGCGACTT+AGG | 0.524812 | 8_2:+60116420 | None:intergenic |
| CTGTAGGTGTATACGTGAGT+TGG | 0.525164 | 8_2:-60114034 | Msa1258840:CDS |
| CTCTTGGAGGAGTATGAAAG+TGG | 0.525404 | 8_2:-60113184 | Msa1258840:CDS |
| CATCACATCAAAGCTCCTGC+TGG | 0.525516 | 8_2:-60116387 | Msa1258840:CDS |
| CATTAAGCGACTTGTTTCCA+TGG | 0.528753 | 8_2:-60114478 | Msa1258840:CDS |
| CATTGAAGATGGGATAATCT+GGG | 0.529614 | 8_2:-60112814 | Msa1258840:three_prime_UTR |
| TGAAAGGCTATTGAGATGCT+GGG | 0.533761 | 8_2:-60113257 | Msa1258840:CDS |
| GTGGTAAGGCACAGACTGCT+GGG | 0.533927 | 8_2:-60116365 | Msa1258840:CDS |
| GAAGGCCCTGGTACTTGCCA+TGG | 0.534434 | 8_2:-60113980 | Msa1258840:CDS |
| AGAAACAAGGCTTTAGCTGA+TGG | 0.535614 | 8_2:+60113823 | None:intergenic |
| CAAGATCACAAAGCTCTTGG+AGG | 0.537964 | 8_2:-60113197 | Msa1258840:CDS |
| CAAGGATGTCAACTGCATCC+AGG | 0.537979 | 8_2:+60114316 | None:intergenic |
| GCTTTCTTGAATTCATCCAA+GGG | 0.546570 | 8_2:+60114600 | None:intergenic |
| TCACATTAAGCATGCATAGG+TGG | 0.548352 | 8_2:+60112488 | None:intergenic |
| ATCAAGACCCTCCTTAATCC+GGG | 0.549632 | 8_2:+60112979 | None:intergenic |
| TCCTTTAGTCAGCTGATTGG+TGG | 0.549699 | 8_2:+60113006 | None:intergenic |
| TTAAAAGAAGCAGCAGCAGA+AGG | 0.550137 | 8_2:-60113922 | Msa1258840:CDS |
| AGTTCCAGCCAAATGGTGAA+AGG | 0.550968 | 8_2:-60113892 | Msa1258840:CDS |
| AGGCTATTGAGATGCTGGGG+CGG | 0.551446 | 8_2:-60113253 | Msa1258840:CDS |
| ATTTACTCTCTCTGGATGAA+GGG | 0.553536 | 8_2:-60112630 | Msa1258840:three_prime_UTR |
| CGCATTCTGGAAAGTTAGGG+CGG | 0.554864 | 8_2:-60116317 | Msa1258840:CDS |
| TTCACCAGCTGGATTGGCAA+AGG | 0.554928 | 8_2:+60113756 | None:intergenic |
| GGGGAAATGGCGTCGAACGA+GGG | 0.561534 | 8_2:-60116513 | Msa1258840:exon |
| CACATTAAGCATGCATAGGT+GGG | 0.561667 | 8_2:+60112489 | None:intergenic |
| ACCACCAATCAGCTGACTAA+AGG | 0.562228 | 8_2:-60113007 | Msa1258840:CDS |
| ATGGGCTGTGGAGGATGCTA+AGG | 0.562248 | 8_2:-60113221 | Msa1258840:CDS |
| GTCTGTGCCTTACCACCAGC+AGG | 0.563393 | 8_2:+60116372 | None:intergenic |
| ACTACCTCATGGTTGAAGAA+AGG | 0.564053 | 8_2:+60113115 | None:intergenic |
| AAGTTAGGGCGGGCTAAGAA+GGG | 0.565574 | 8_2:-60116306 | Msa1258840:intron |
| CAGGATAATGTTGCATCAAG+AGG | 0.565584 | 8_2:-60112668 | Msa1258840:three_prime_UTR |
| CCTTCTTCACAACCTCGTGA+TGG | 0.565630 | 8_2:+60113998 | None:intergenic |
| CTGGTGGTAAGGGCACTTGG+GGG | 0.567812 | 8_2:-60115051 | Msa1258840:CDS |
| AAACGGTGGTGTGAGAGAAA+CGG | 0.568099 | 8_2:+60116985 | None:intergenic |
| AAGCTTTCTTCACTACCTCA+TGG | 0.568149 | 8_2:+60113104 | None:intergenic |
| TGATGGTAGAAGCCACCCCT+TGG | 0.570649 | 8_2:+60112892 | None:intergenic |
| TAGGAACCCTATGAGCTGGT+TGG | 0.572366 | 8_2:-60114639 | Msa1258840:CDS |
| CATCAACAACAGCACGTGCC+AGG | 0.573372 | 8_2:+60114286 | None:intergenic |
| CTGCTCGTCATGCAGGTGAA+AGG | 0.573520 | 8_2:-60113273 | Msa1258840:CDS |
| TGGGGAAATGGCGTCGAACG+AGG | 0.577450 | 8_2:-60116514 | Msa1258840:exon |
| GTCTTTCCACAAGTTCTGCA+TGG | 0.577504 | 8_2:+60114154 | None:intergenic |
| CCTATGCATGCTTAATGTGA+TGG | 0.577811 | 8_2:-60112485 | Msa1258840:three_prime_UTR |
| GTGGAGCATGCACAGACCAA+GGG | 0.578585 | 8_2:-60112908 | Msa1258840:CDS |
| AATCCATCCCTAATCTGTGT+GGG | 0.579210 | 8_2:+60114381 | None:intergenic |
| TGGTAGTGAAACTGTGCGTA+TGG | 0.580211 | 8_2:-60113311 | Msa1258840:CDS |
| CGAGGTTGTGAAGAAGGCCC+TGG | 0.585050 | 8_2:-60113992 | Msa1258840:CDS |
| GAAAATTGGAGACCGAAACC+AGG | 0.585352 | 8_2:+60112529 | None:intergenic |
| ATCATGCCTGTCCATTGCCA+TGG | 0.586529 | 8_2:+60114461 | None:intergenic |
| AGTCCCACACAGATTAGGGA+TGG | 0.587668 | 8_2:-60114384 | Msa1258840:CDS |
| GTCCCCAAGGCAATATCTGA+AGG | 0.590596 | 8_2:-60113793 | Msa1258840:CDS |
| TCCACACCATGCAGAACTTG+TGG | 0.592118 | 8_2:-60114160 | Msa1258840:CDS |
| GTTGTCCTCCCATTGAAGAT+GGG | 0.597276 | 8_2:-60112824 | Msa1258840:three_prime_UTR |
| ACTGAAGTATTCATCTATGA+GGG | 0.597331 | 8_2:+60114569 | None:intergenic |
| TAGGATGCTGGATTTGCTGC+AGG | 0.597535 | 8_2:-60113053 | Msa1258840:CDS |
| TTCTGCTGAAGGAATCTCCA+TGG | 0.597635 | 8_2:+60113963 | None:intergenic |
| CCAAGGCAATATCTGAAGGA+TGG | 0.597668 | 8_2:-60113789 | Msa1258840:CDS |
| CAGAACTTGTGGAAAGACGA+TGG | 0.601439 | 8_2:-60114149 | Msa1258840:CDS |
| TCAGCTGATTGGTGGTGATG+AGG | 0.602174 | 8_2:+60113014 | None:intergenic |
| CAATCCAGCTGGTGAAAATG+GGG | 0.602846 | 8_2:-60113749 | Msa1258840:CDS |
| GTGACGTGTTTGTGTTATTG+GGG | 0.603994 | 8_2:-60116532 | Msa1258840:five_prime_UTR |
| CCATCACATTAAGCATGCAT+AGG | 0.607095 | 8_2:+60112485 | None:intergenic |
| AAATCCATCCCTAATCTGTG+TGG | 0.607645 | 8_2:+60114380 | None:intergenic |
| GGGGCAGAGGAATCAAATGA+TGG | 0.608075 | 8_2:+60112875 | None:intergenic |
| CACATCAAAGCTCCTGCTGG+TGG | 0.608523 | 8_2:-60116384 | Msa1258840:CDS |
| GCATTCTGGAAAGTTAGGGC+GGG | 0.610221 | 8_2:-60116316 | Msa1258840:CDS |
| ATGGGAGGACAACATGCCCT+GGG | 0.612334 | 8_2:+60112834 | None:intergenic |
| GATGTCTAGCAAAACTACCC+AGG | 0.613108 | 8_2:-60112851 | Msa1258840:exon |
| TGTGGAGCATGCACAGACCA+AGG | 0.614176 | 8_2:-60112909 | Msa1258840:CDS |
| GGATTCACCCGGATTAAGGA+GGG | 0.622780 | 8_2:-60112986 | Msa1258840:CDS |
| TTGTGAAAGTGATGAATCGG+TGG | 0.625302 | 8_2:+60117034 | None:intergenic |
| AGAACTTGTGGAAAGACGAT+GGG | 0.626205 | 8_2:-60114148 | Msa1258840:CDS |
| ATCTGCTGATGATCTTGCAG+TGG | 0.629980 | 8_2:-60114343 | Msa1258840:CDS |
| TATCATAATTTGGATCATTG+CGG | 0.630208 | 8_2:+60114993 | None:intergenic |
| GCCAGTGTATTCGTGACTTG+GGG | 0.631751 | 8_2:-60113141 | Msa1258840:CDS |
| CTTTCTTGAATTCATCCAAG+GGG | 0.633512 | 8_2:+60114601 | None:intergenic |
| AGTTGCATTCTTCCATCACG+AGG | 0.633964 | 8_2:-60114010 | Msa1258840:CDS |
| TTGCTGTGAGGCATGTGCGT+CGG | 0.634726 | 8_2:-60116341 | Msa1258840:CDS |
| ATGTCTAGCAAAACTACCCA+GGG | 0.636767 | 8_2:-60112850 | Msa1258840:exon |
| TCTTGGAGGAGTATGAAAGT+GGG | 0.639560 | 8_2:-60113183 | Msa1258840:CDS |
| GCTCTTCCGGAATCTTCCAA+GGG | 0.641419 | 8_2:-60114225 | Msa1258840:CDS |
| AAATGCTGAAGATACAACGC+TGG | 0.642106 | 8_2:-60113449 | Msa1258840:CDS |
| GTGGATGCAGATGGTGCTGG+TGG | 0.644646 | 8_2:-60115067 | Msa1258840:intron |
| TATAGAGATATTCTCAACAG+AGG | 0.644683 | 8_2:-60113503 | Msa1258840:CDS |
| GGAATCTTCCAAGGGAGCTG+AGG | 0.644900 | 8_2:-60114217 | Msa1258840:CDS |
| AAGTAAAAGAGCAAATGGAA+AGG | 0.644978 | 8_2:+60112776 | None:intergenic |
| TCTGGACATTCCAAACGCCA+AGG | 0.645925 | 8_2:-60112948 | Msa1258840:CDS |
| TAATCTGGGATTGTTTGACA+TGG | 0.648822 | 8_2:-60112800 | Msa1258840:three_prime_UTR |
| CACGTGCCAGGAATAAAGCA+AGG | 0.649502 | 8_2:+60114298 | None:intergenic |
| TGGAGGAGTATGAAAGTGGG+GGG | 0.649814 | 8_2:-60113180 | Msa1258840:CDS |
| TTGGAGGAGTATGAAAGTGG+GGG | 0.650081 | 8_2:-60113181 | Msa1258840:CDS |
| CTTGGAGGAGTATGAAAGTG+GGG | 0.653649 | 8_2:-60113182 | Msa1258840:CDS |
| AAGTTGAAGATGAGAATGTG+AGG | 0.655201 | 8_2:-60113720 | Msa1258840:CDS |
| GCCAAGACAGGAGAAGACAG+TGG | 0.655220 | 8_2:+60116907 | None:intergenic |
| ATTATCCCATCTTCAATGGG+AGG | 0.656417 | 8_2:+60112819 | None:intergenic |
| GGAGGAGTATGAAAGTGGGG+GGG | 0.657610 | 8_2:-60113179 | Msa1258840:CDS |
| GCCCTGGCAAGAAAGGCTGG+TGG | 0.659425 | 8_2:+60114255 | None:intergenic |
| AGCATGCACAGACCAAGGGG+TGG | 0.663824 | 8_2:-60112904 | Msa1258840:CDS |
| TCTTCTAGATCATTTCACTG+AGG | 0.665538 | 8_2:-60112745 | Msa1258840:three_prime_UTR |
| AGCTGACTAAAGGATTCACC+CGG | 0.666003 | 8_2:-60112997 | Msa1258840:CDS |
| GGATGAATTCAAGAAAGCAG+TGG | 0.666447 | 8_2:-60114595 | Msa1258840:CDS |
| AAAGTGATGAATCGGTGGAA+AGG | 0.668878 | 8_2:+60117039 | None:intergenic |
| AGATGAATACTTCAGTAATG+GGG | 0.676923 | 8_2:-60114562 | Msa1258840:CDS |
| AATCTCCATGGCAAGTACCA+GGG | 0.677633 | 8_2:+60113975 | None:intergenic |
| GAAAGGCTATTGAGATGCTG+GGG | 0.679754 | 8_2:-60113256 | Msa1258840:CDS |
| GCGAGACACTTGAAGCCTGT+AGG | 0.680196 | 8_2:-60114050 | Msa1258840:CDS |
| TGGAGCATGCACAGACCAAG+GGG | 0.681884 | 8_2:-60112907 | Msa1258840:CDS |
| TGATCAGCAAGCAATGTCGA+CGG | 0.684900 | 8_2:+60116411 | None:intergenic |
| CTTGTGGAAAGACGATGGGG+TGG | 0.687294 | 8_2:-60114144 | Msa1258840:CDS |
| TCCCCAAGTCACGAATACAC+TGG | 0.687638 | 8_2:+60113140 | None:intergenic |
| GGGGACAAATGACAGAAACA+AGG | 0.689119 | 8_2:+60113810 | None:intergenic |
| ATCCTTCAGATATTGCCTTG+GGG | 0.691723 | 8_2:+60113791 | None:intergenic |
| AGACTGCTGGGATTGCTGTG+AGG | 0.694684 | 8_2:-60116353 | Msa1258840:CDS |
| AGACTACCACCAAAATGCAG+TGG | 0.698145 | 8_2:-60113331 | Msa1258840:CDS |
| TCCAAATTATGATAGTGGCG+AGG | 0.698403 | 8_2:-60114984 | Msa1258840:intron |
| GATGCCTTTCTTCAACCATG+AGG | 0.721876 | 8_2:-60113119 | Msa1258840:CDS |
| AATATCGAAACCCTAAACGG+TGG | 0.740443 | 8_2:+60116971 | None:intergenic |
| AATTTCATCCAAGTTCAATG+GGG | 0.741522 | 8_2:+60113360 | None:intergenic |
| GAACTTGTGGAAAGACGATG+GGG | 0.755832 | 8_2:-60114147 | Msa1258840:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATTTTTTTCTTTGATT+TGG | - | chr8_2:60112736-60112755 | Msa1258840:three_prime_UTR | 10.0% |
| !! | TTTATACATATTAGTTATAA+CGG | - | chr8_2:60113697-60113716 | Msa1258840:CDS | 10.0% |
| !! | TTTATACATATAAGTTATAA+CGG | - | chr8_2:60113799-60113818 | Msa1258840:CDS | 10.0% |
| !! | GAAAATAATTTATACATATA+AGG | - | chr8_2:60113791-60113810 | Msa1258840:CDS | 10.0% |
| !! | TAGTATATATTTAGATGAAT+AGG | - | chr8_2:60113385-60113404 | Msa1258840:CDS | 15.0% |
| !!! | TAAATTATTTTCCTAAAAAG+TGG | + | chr8_2:60113681-60113700 | None:intergenic | 15.0% |
| !!! | TAAATTATTTTCCTAAAAAG+TGG | + | chr8_2:60113681-60113700 | None:intergenic | 15.0% |
| !!! | TAAATTATTTTCCTAAAAAG+TGG | + | chr8_2:60113681-60113700 | None:intergenic | 15.0% |
| !! | TTTATACATATAAGGTATAA+CGG | - | chr8_2:60113901-60113920 | Msa1258840:CDS | 15.0% |
| !!! | TTACCAATTGTTTTTTTTAA+TGG | - | chr8_2:60114389-60114408 | Msa1258840:CDS | 15.0% |
| !!! | ATTATTTCTGTTATTTCTTG+CGG | - | chr8_2:60112843-60112862 | Msa1258840:three_prime_UTR | 20.0% |
| !!! | TAGGATTTTCAAAGTTTATT+CGG | - | chr8_2:60113416-60113435 | Msa1258840:CDS | 20.0% |
| !! | AGTGAATTTACAAGAAATTT+AGG | + | chr8_2:60114252-60114271 | None:intergenic | 20.0% |
| !!! | TTTGGATAATTTTCATAAAC+TGG | - | chr8_2:60114283-60114302 | Msa1258840:CDS | 20.0% |
| !! | AGACCATTAAAAAAAACAAT+TGG | + | chr8_2:60114395-60114414 | None:intergenic | 20.0% |
| !!! | TTTTATCATTCTGATTTTGT+TGG | - | chr8_2:60114562-60114581 | Msa1258840:CDS | 20.0% |
| !! | CAAACTATCTTAAAAAAAGA+TGG | - | chr8_2:60114658-60114677 | Msa1258840:intron | 20.0% |
| !! | TTAACCTCTTCAAAAATATT+GGG | + | chr8_2:60115923-60115942 | None:intergenic | 20.0% |
| !! | ATTAACCTCTTCAAAAATAT+TGG | + | chr8_2:60115924-60115943 | None:intergenic | 20.0% |
| !! | AGTTTGAAAGATATATCAAT+TGG | - | chr8_2:60116945-60116964 | Msa1258840:five_prime_UTR | 20.0% |
| !! | TTTTTGTGAAAGTGATGAAT+CGG | + | chr8_2:60112485-60112504 | None:intergenic | 25.0% |
| ! | AGTGAAATGAAAATGCAAAT+CGG | + | chr8_2:60112666-60112685 | None:intergenic | 25.0% |
| ! | ATGTTAATGCTGTTATTGAT+AGG | - | chr8_2:60112953-60112972 | Msa1258840:CDS | 25.0% |
| !! | TAAGCTGTAGTATTTTACTT+AGG | - | chr8_2:60113306-60113325 | Msa1258840:CDS | 25.0% |
| !! | AGGATTTTCAAAGTTTATTC+GGG | - | chr8_2:60113417-60113436 | Msa1258840:CDS | 25.0% |
| !!! | TTACTTTATTTCGTCTTTTG+CGG | - | chr8_2:60113476-60113495 | Msa1258840:CDS | 25.0% |
| !!! | GTTATTGTTTCTGATAAATG+TGG | - | chr8_2:60113552-60113571 | Msa1258840:CDS | 25.0% |
| !!! | AAGTCATTCATTATTTCTGA+AGG | - | chr8_2:60114048-60114067 | Msa1258840:CDS | 25.0% |
| ! | GTAATAGTGTTAACTAAACT+AGG | + | chr8_2:60114093-60114112 | None:intergenic | 25.0% |
| ! | ATTCACTTGCACATATTATT+TGG | - | chr8_2:60114265-60114284 | Msa1258840:CDS | 25.0% |
| ! | TATCATAATTTGGATCATTG+CGG | + | chr8_2:60114523-60114542 | None:intergenic | 25.0% |
| ! | AATGATCCAAATTATGATAG+TGG | - | chr8_2:60114524-60114543 | Msa1258840:CDS | 25.0% |
| ! | TACAGAAGAGTTAACAATAT+GGG | + | chr8_2:60114752-60114771 | None:intergenic | 25.0% |
| ! | TAGAATGGAAAAAATAAAGC+AGG | + | chr8_2:60114782-60114801 | None:intergenic | 25.0% |
| !! | TGCATACTTTTGCATTTTAT+AGG | - | chr8_2:60114855-60114874 | Msa1258840:intron | 25.0% |
| ! | ATAGATGAATACTTCAGTAA+TGG | - | chr8_2:60114949-60114968 | Msa1258840:intron | 25.0% |
| ! | TAGATGAATACTTCAGTAAT+GGG | - | chr8_2:60114950-60114969 | Msa1258840:intron | 25.0% |
| !! | CTTAAAGAATATGTTGATAG+TGG | - | chr8_2:60115441-60115460 | Msa1258840:intron | 25.0% |
| ! | AAAAATATTGGGTTATACTC+AGG | + | chr8_2:60115912-60115931 | None:intergenic | 25.0% |
| !!! | ATAACCCAATATTTTTGAAG+AGG | - | chr8_2:60115916-60115935 | Msa1258840:intron | 25.0% |
| !! | ATAGAAAGCAAATTTTTCCT+TGG | + | chr8_2:60116585-60116604 | None:intergenic | 25.0% |
| !! | TATTTCATTTACAGCTTTTC+AGG | - | chr8_2:60116826-60116845 | Msa1258840:intron | 25.0% |
| ! | TCAAACTAAACTTGATCTAA+TGG | + | chr8_2:60116932-60116951 | None:intergenic | 25.0% |
| !!! | TATTTTTAGATTCCTGGTTT+CGG | - | chr8_2:60116972-60116991 | Msa1258840:five_prime_UTR | 25.0% |
| AAGAATATCGAAACCCTAAA+CGG | + | chr8_2:60112548-60112567 | None:intergenic | 30.0% | |
| ! | GATTTGCATTTTCATTTCAC+TGG | - | chr8_2:60112665-60112684 | Msa1258840:three_prime_UTR | 30.0% |
| !! | GTGTTCGTTTTGAATTGAAA+CGG | - | chr8_2:60112886-60112905 | Msa1258840:CDS | 30.0% |
| !! | AAACGGTTATTGATTTCGTT+AGG | - | chr8_2:60112903-60112922 | Msa1258840:CDS | 30.0% |
| ! | TAGTATTTTACTTAGGCTGT+TGG | - | chr8_2:60113313-60113332 | Msa1258840:CDS | 30.0% |
| !! | TAGAAGAAAGACTTTTGAGA+AGG | - | chr8_2:60113353-60113372 | Msa1258840:CDS | 30.0% |
| AGATGAATAGGTGATAGATT+AGG | - | chr8_2:60113397-60113416 | Msa1258840:CDS | 30.0% | |
| ! | CTATCAGTTCTAATTGATTG+GGG | + | chr8_2:60113629-60113648 | None:intergenic | 30.0% |
| ! | CCTATCAGTTCTAATTGATT+GGG | + | chr8_2:60113630-60113649 | None:intergenic | 30.0% |
| ! | ACCTATCAGTTCTAATTGAT+TGG | + | chr8_2:60113631-60113650 | None:intergenic | 30.0% |
| CTAAAAAGTGGTATTGTATC+TGG | + | chr8_2:60113771-60113790 | None:intergenic | 30.0% | |
| !!! | CAGATACAATACCACTTTTT+AGG | - | chr8_2:60113769-60113788 | Msa1258840:CDS | 30.0% |
| ! | TCTGTGAATGATTGCATTTT+CGG | - | chr8_2:60113825-60113844 | Msa1258840:CDS | 30.0% |
| ! | AATGATTGCATTTTCGGTAT+AGG | - | chr8_2:60113831-60113850 | Msa1258840:CDS | 30.0% |
| ! | TCTGTGAATGATTGCATTTT+TGG | - | chr8_2:60113825-60113844 | Msa1258840:CDS | 30.0% |
| !!! | ATGATTGCATTTTTGGTACA+TGG | - | chr8_2:60113934-60113953 | Msa1258840:CDS | 30.0% |
| !!! | TGATTGCATTTTTGGTACAT+GGG | - | chr8_2:60113935-60113954 | Msa1258840:CDS | 30.0% |
| ! | TTTTGTCGTAGTTGCATTTT+CGG | - | chr8_2:60113960-60113979 | Msa1258840:CDS | 30.0% |
| !! | GATCAATAAGATTAGCTTCA+TGG | + | chr8_2:60114136-60114155 | None:intergenic | 30.0% |
| AGCTAATCTTATTGATCATG+AGG | - | chr8_2:60114139-60114158 | Msa1258840:CDS | 30.0% | |
| ! | GGATAATTTTCATAAACTGG+AGG | - | chr8_2:60114286-60114305 | Msa1258840:CDS | 30.0% |
| CATGCGATAATAATCTACAT+TGG | - | chr8_2:60114416-60114435 | Msa1258840:CDS | 30.0% | |
| GTACAGAAGAGTTAACAATA+TGG | + | chr8_2:60114753-60114772 | None:intergenic | 30.0% | |
| ACAACAAGAGAAAGATAGAA+TGG | + | chr8_2:60114797-60114816 | None:intergenic | 30.0% | |
| ! | ACTGAAGTATTCATCTATGA+GGG | + | chr8_2:60114947-60114966 | None:intergenic | 30.0% |
| ! | TACTGAAGTATTCATCTATG+AGG | + | chr8_2:60114948-60114967 | None:intergenic | 30.0% |
| AGATGAATACTTCAGTAATG+GGG | - | chr8_2:60114951-60114970 | Msa1258840:intron | 30.0% | |
| TTTAACAGCTTCAACAGTAA+AGG | + | chr8_2:60115576-60115595 | None:intergenic | 30.0% | |
| ! | TTTCCTTTTCTCTGTTCTTT+CGG | + | chr8_2:60115962-60115981 | None:intergenic | 30.0% |
| AAAGAACAGAGAAAAGGAAA+TGG | - | chr8_2:60115962-60115981 | Msa1258840:intron | 30.0% | |
| TATAGAGATATTCTCAACAG+AGG | - | chr8_2:60116010-60116029 | Msa1258840:intron | 30.0% | |
| TCAACAGAGGATATTGTTAA+TGG | - | chr8_2:60116023-60116042 | Msa1258840:intron | 30.0% | |
| AATTTCATCCAAGTTCAATG+GGG | + | chr8_2:60116156-60116175 | None:intergenic | 30.0% | |
| CAATTTCATCCAAGTTCAAT+GGG | + | chr8_2:60116157-60116176 | None:intergenic | 30.0% | |
| ! | GGAAAAATTTGCTTTCTATG+TGG | - | chr8_2:60116586-60116605 | Msa1258840:intron | 30.0% |
| AAGTAAAAGAGCAAATGGAA+AGG | + | chr8_2:60116740-60116759 | None:intergenic | 30.0% | |
| ATGTCAAGTAAAAGAGCAAA+TGG | + | chr8_2:60116745-60116764 | None:intergenic | 30.0% | |
| ! | CTTTTAACATTTACTCTCTC+TGG | - | chr8_2:60116875-60116894 | Msa1258840:five_prime_UTR | 30.0% |
| !! | AGACAGTGGATTTTCCAAAT+CGG | + | chr8_2:60112595-60112614 | None:intergenic | 35.0% |
| ATGAAAATGCAAATCGGAAC+TGG | + | chr8_2:60112660-60112679 | None:intergenic | 35.0% | |
| ! | TGTTTGTGTTATTGGGGAAA+TGG | - | chr8_2:60112987-60113006 | Msa1258840:CDS | 35.0% |
| !! | ATTTTTGACTGAAGGACAGA+GGG | - | chr8_2:60113023-60113042 | Msa1258840:CDS | 35.0% |
| TGATTCTATATGCTATGCTG+TGG | - | chr8_2:60113265-60113284 | Msa1258840:CDS | 35.0% | |
| CCCAATCAATTAGAACTGAT+AGG | - | chr8_2:60113627-60113646 | Msa1258840:CDS | 35.0% | |
| CTAAAAAGTGGTATCGTATC+TGG | + | chr8_2:60113669-60113688 | None:intergenic | 35.0% | |
| !!! | CAGATACGATACCACTTTTT+AGG | - | chr8_2:60113667-60113686 | Msa1258840:CDS | 35.0% |
| ! | TCTGTGAATGATCGCATTTT+CGG | - | chr8_2:60113723-60113742 | Msa1258840:CDS | 35.0% |
| ! | AATGATCGCATTTTCGGTAT+AGG | - | chr8_2:60113729-60113748 | Msa1258840:CDS | 35.0% |
| CTAAAAAGTGGTATCGTATC+TGG | + | chr8_2:60113669-60113688 | None:intergenic | 35.0% | |
| !!! | CAGATACGATACCACTTTTT+AGG | - | chr8_2:60113667-60113686 | Msa1258840:CDS | 35.0% |
| ! | TAGTTGCATTTTCGGTACAT+GGG | - | chr8_2:60113968-60113987 | Msa1258840:CDS | 35.0% |
| ! | GGAAGCAAAATCATTTTCGT+TGG | + | chr8_2:60114115-60114134 | None:intergenic | 35.0% |
| TTATTGATCATGAGGTACAG+AGG | - | chr8_2:60114147-60114166 | Msa1258840:CDS | 35.0% | |
| ! | TTTTCCTTTCTCCCAAATTC+AGG | - | chr8_2:60114339-60114358 | Msa1258840:CDS | 35.0% |
| TTTCCTTTCTCCCAAATTCA+GGG | - | chr8_2:60114340-60114359 | Msa1258840:CDS | 35.0% | |
| CACATATTAGCCCTGAATTT+GGG | + | chr8_2:60114353-60114372 | None:intergenic | 35.0% | |
| TCACATATTAGCCCTGAATT+TGG | + | chr8_2:60114354-60114373 | None:intergenic | 35.0% | |
| AATCTACATTGGTCATCTTG+TGG | - | chr8_2:60114427-60114446 | Msa1258840:CDS | 35.0% | |
| GTTAACAATATGGGTCTGTT+TGG | + | chr8_2:60114743-60114762 | None:intergenic | 35.0% | |
| GAAAAAATAAAGCAGGCAAC+AGG | + | chr8_2:60114775-60114794 | None:intergenic | 35.0% | |
| CTTTCTTGAATTCATCCAAG+GGG | + | chr8_2:60114915-60114934 | None:intergenic | 35.0% | |
| GCTTTCTTGAATTCATCCAA+GGG | + | chr8_2:60114916-60114935 | None:intergenic | 35.0% | |
| TGCTTTCTTGAATTCATCCA+AGG | + | chr8_2:60114917-60114936 | None:intergenic | 35.0% | |
| ACAAGTCGCTTAATGAAGTA+TGG | + | chr8_2:60115030-60115049 | None:intergenic | 35.0% | |
| GCATGATAAGGAGAAAGAAA+TGG | - | chr8_2:60115068-60115087 | Msa1258840:intron | 35.0% | |
| TATCAAGAGCAAGATCATCT+AGG | + | chr8_2:60115668-60115687 | None:intergenic | 35.0% | |
| TCACATTCTCATCTTCAACT+TGG | + | chr8_2:60115794-60115813 | None:intergenic | 35.0% | |
| AAGTTGAAGATGAGAATGTG+AGG | - | chr8_2:60115793-60115812 | Msa1258840:intron | 35.0% | |
| ! | GAATGTGAGGAAGTACAAAA+AGG | - | chr8_2:60115806-60115825 | Msa1258840:intron | 35.0% |
| GAGGTTAATAACACTTGCTT+TGG | - | chr8_2:60115935-60115954 | Msa1258840:intron | 35.0% | |
| !!! | TAATGGTTTTGTCATGCTTC+TGG | - | chr8_2:60116040-60116059 | Msa1258840:intron | 35.0% |
| CCAATTTCATCCAAGTTCAA+TGG | + | chr8_2:60116158-60116177 | None:intergenic | 35.0% | |
| CCATTGAACTTGGATGAAAT+TGG | - | chr8_2:60116155-60116174 | Msa1258840:intron | 35.0% | |
| ! | AGTGAAGAAAGCTTTGGTTA+TGG | - | chr8_2:60116418-60116437 | Msa1258840:CDS | 35.0% |
| CAGATTATCCCATCTTCAAT+GGG | + | chr8_2:60116700-60116719 | None:intergenic | 35.0% | |
| CATTGAAGATGGGATAATCT+GGG | - | chr8_2:60116699-60116718 | Msa1258840:intron | 35.0% | |
| ! | TAATCTGGGATTGTTTGACA+TGG | - | chr8_2:60116713-60116732 | Msa1258840:intron | 35.0% |
| TCTTCTAGATCATTTCACTG+AGG | - | chr8_2:60116768-60116787 | Msa1258840:intron | 35.0% | |
| TTTACAATGACCGAAGTAAC+AGG | + | chr8_2:60116796-60116815 | None:intergenic | 35.0% | |
| CTTCGGTCATTGTAAAAAGT+TGG | - | chr8_2:60116800-60116819 | Msa1258840:intron | 35.0% | |
| ATTTACTCTCTCTGGATGAA+GGG | - | chr8_2:60116883-60116902 | Msa1258840:five_prime_UTR | 35.0% | |
| !!! | GGCTACTATTTTTAGATTCC+TGG | - | chr8_2:60116966-60116985 | Msa1258840:five_prime_UTR | 35.0% |
| AAAGTGATGAATCGGTGGAA+AGG | + | chr8_2:60112477-60112496 | None:intergenic | 40.0% | |
| TTGTGAAAGTGATGAATCGG+TGG | + | chr8_2:60112482-60112501 | None:intergenic | 40.0% | |
| AATATCGAAACCCTAAACGG+TGG | + | chr8_2:60112545-60112564 | None:intergenic | 40.0% | |
| ACGTGACGTGTTTGTGTTAT+TGG | - | chr8_2:60112979-60112998 | Msa1258840:CDS | 40.0% | |
| ! | CGTGACGTGTTTGTGTTATT+GGG | - | chr8_2:60112980-60112999 | Msa1258840:CDS | 40.0% |
| ! | GTGACGTGTTTGTGTTATTG+GGG | - | chr8_2:60112981-60113000 | Msa1258840:CDS | 40.0% |
| !! | AACGAGGGATTTTTGACTGA+AGG | - | chr8_2:60113015-60113034 | Msa1258840:CDS | 40.0% |
| !! | GATTTTTGACTGAAGGACAG+AGG | - | chr8_2:60113022-60113041 | Msa1258840:CDS | 40.0% |
| GGCTGTTGGATTTCTTGAAA+AGG | - | chr8_2:60113327-60113346 | Msa1258840:CDS | 40.0% | |
| ! | ATTTCGTCTTTTGCGGCTAA+TGG | - | chr8_2:60113483-60113502 | Msa1258840:CDS | 40.0% |
| !!! | GGCTAATGGCTTTTTTGCAA+TGG | - | chr8_2:60113497-60113516 | Msa1258840:CDS | 40.0% |
| ! | TCAGTTCTAATTGATTGGGG+AGG | + | chr8_2:60113626-60113645 | None:intergenic | 40.0% |
| ! | GTAGTTGCATTTTCGGTACA+TGG | - | chr8_2:60113967-60113986 | Msa1258840:CDS | 40.0% |
| ! | ACATGGGCATTTTGTCGTAT+TGG | - | chr8_2:60113984-60114003 | Msa1258840:CDS | 40.0% |
| TTTCTTCCCATCATTCCCAA+GGG | - | chr8_2:60114021-60114040 | Msa1258840:CDS | 40.0% | |
| ATGAATGACTTTCCACCCTT+GGG | + | chr8_2:60114039-60114058 | None:intergenic | 40.0% | |
| AATGAATGACTTTCCACCCT+TGG | + | chr8_2:60114040-60114059 | None:intergenic | 40.0% | |
| GTGGACATCAATGCAAAACA+AGG | - | chr8_2:60114169-60114188 | Msa1258840:CDS | 40.0% | |
| !! | TCCAAATTATGATAGTGGCG+AGG | - | chr8_2:60114529-60114548 | Msa1258840:CDS | 40.0% |
| ACCTCGCCACTATCATAATT+TGG | + | chr8_2:60114533-60114552 | None:intergenic | 40.0% | |
| TATGGGTCTGTTTGGAAGAT+TGG | + | chr8_2:60114735-60114754 | None:intergenic | 40.0% | |
| TTTATAGGAACCCTATGAGC+TGG | - | chr8_2:60114870-60114889 | Msa1258840:intron | 40.0% | |
| GGATGAATTCAAGAAAGCAG+TGG | - | chr8_2:60114918-60114937 | Msa1258840:intron | 40.0% | |
| ! | CAGTAATGGGGATGTTGATT+TGG | - | chr8_2:60114963-60114982 | Msa1258840:intron | 40.0% |
| ! | CATTAAGCGACTTGTTTCCA+TGG | - | chr8_2:60115035-60115054 | Msa1258840:CDS | 40.0% |
| TCATTAGTCCCACACAGATT+AGG | - | chr8_2:60115124-60115143 | Msa1258840:intron | 40.0% | |
| CATTAGTCCCACACAGATTA+GGG | - | chr8_2:60115125-60115144 | Msa1258840:intron | 40.0% | |
| AATCCATCCCTAATCTGTGT+GGG | + | chr8_2:60115135-60115154 | None:intergenic | 40.0% | |
| AAATCCATCCCTAATCTGTG+TGG | + | chr8_2:60115136-60115155 | None:intergenic | 40.0% | |
| ! | TGACATCCTTGCTTTATTCC+TGG | - | chr8_2:60115209-60115228 | Msa1258840:intron | 40.0% |
| AGAACTTGTGGAAAGACGAT+GGG | - | chr8_2:60115365-60115384 | Msa1258840:intron | 40.0% | |
| TGTAGGTGTATACGTGAGTT+GGG | - | chr8_2:60115480-60115499 | Msa1258840:intron | 40.0% | |
| AACAGTAAAGGTTCTGCTGA+AGG | + | chr8_2:60115564-60115583 | None:intergenic | 40.0% | |
| TTAAAAGAAGCAGCAGCAGA+AGG | - | chr8_2:60115591-60115610 | Msa1258840:intron | 40.0% | |
| ! | ACTGATTAGTTCCAGCCAAA+TGG | - | chr8_2:60115614-60115633 | Msa1258840:intron | 40.0% |
| GAGAAAACCCTTTCACCATT+TGG | + | chr8_2:60115632-60115651 | None:intergenic | 40.0% | |
| ! | AGAAACAAGGCTTTAGCTGA+TGG | + | chr8_2:60115693-60115712 | None:intergenic | 40.0% |
| ATCCTTCAGATATTGCCTTG+GGG | + | chr8_2:60115725-60115744 | None:intergenic | 40.0% | |
| CATCCTTCAGATATTGCCTT+GGG | + | chr8_2:60115726-60115745 | None:intergenic | 40.0% | |
| ATTCGAAGCCTAGAAGATCT+TGG | - | chr8_2:60115882-60115901 | Msa1258840:intron | 40.0% | |
| CTATATGAAGTGCAGATAGC+AGG | + | chr8_2:60115995-60116014 | None:intergenic | 40.0% | |
| AAATGCTGAAGATACAACGC+TGG | - | chr8_2:60116064-60116083 | Msa1258840:intron | 40.0% | |
| AGATACAACGCTGGATATAC+TGG | - | chr8_2:60116073-60116092 | Msa1258840:intron | 40.0% | |
| !!! | AGCTTGCTCTGTTTTTAGCT+CGG | - | chr8_2:60116108-60116127 | Msa1258840:intron | 40.0% |
| ! | GTTTCACTACCACTGCATTT+TGG | + | chr8_2:60116194-60116213 | None:intergenic | 40.0% |
| TGAAAGGCTATTGAGATGCT+GGG | - | chr8_2:60116256-60116275 | Msa1258840:intron | 40.0% | |
| ! | TCTTGGAGGAGTATGAAAGT+GGG | - | chr8_2:60116330-60116349 | Msa1258840:CDS | 40.0% |
| ACTACCTCATGGTTGAAGAA+AGG | + | chr8_2:60116401-60116420 | None:intergenic | 40.0% | |
| AAGCTTTCTTCACTACCTCA+TGG | + | chr8_2:60116412-60116431 | None:intergenic | 40.0% | |
| TGAGGTAGTGAAGAAAGCTT+TGG | - | chr8_2:60116412-60116431 | Msa1258840:CDS | 40.0% | |
| CCTATCATTCTTCTTCTCCA+TGG | + | chr8_2:60116444-60116463 | None:intergenic | 40.0% | |
| CCATGGAGAAGAAGAATGAT+AGG | - | chr8_2:60116441-60116460 | Msa1258840:CDS | 40.0% | |
| GAAGAAGAATGATAGGATGC+TGG | - | chr8_2:60116448-60116467 | Msa1258840:CDS | 40.0% | |
| GAATCCTTTAGTCAGCTGAT+TGG | + | chr8_2:60116513-60116532 | None:intergenic | 40.0% | |
| TAAAGGATTCACCCGGATTA+AGG | - | chr8_2:60116523-60116542 | Msa1258840:exon | 40.0% | |
| ! | GCAAATTTTTCCTTGGCGTT+TGG | + | chr8_2:60116578-60116597 | None:intergenic | 40.0% |
| !! | GTAGTTTTGCTAGACATCTG+GGG | + | chr8_2:60116660-60116679 | None:intergenic | 40.0% |
| !! | GGTAGTTTTGCTAGACATCT+GGG | + | chr8_2:60116661-60116680 | None:intergenic | 40.0% |
| ATGTCTAGCAAAACTACCCA+GGG | - | chr8_2:60116663-60116682 | Msa1258840:intron | 40.0% | |
| ATTATCCCATCTTCAATGGG+AGG | + | chr8_2:60116697-60116716 | None:intergenic | 40.0% | |
| CCAGATTATCCCATCTTCAA+TGG | + | chr8_2:60116701-60116720 | None:intergenic | 40.0% | |
| CCATTGAAGATGGGATAATC+TGG | - | chr8_2:60116698-60116717 | Msa1258840:intron | 40.0% | |
| CAGGATAATGTTGCATCAAG+AGG | - | chr8_2:60116845-60116864 | Msa1258840:intron | 40.0% | |
| CATTTACTCTCTCTGGATGA+AGG | - | chr8_2:60116882-60116901 | Msa1258840:five_prime_UTR | 40.0% | |
| CACATTAAGCATGCATAGGT+GGG | + | chr8_2:60117027-60117046 | None:intergenic | 40.0% | |
| TCACATTAAGCATGCATAGG+TGG | + | chr8_2:60117028-60117047 | None:intergenic | 40.0% | |
| CCATCACATTAAGCATGCAT+AGG | + | chr8_2:60117031-60117050 | None:intergenic | 40.0% | |
| CCTATGCATGCTTAATGTGA+TGG | - | chr8_2:60117028-60117047 | Msa1258840:five_prime_UTR | 40.0% | |
| AAACGGTGGTGTGAGAGAAA+CGG | + | chr8_2:60112531-60112550 | None:intergenic | 45.0% | |
| TTTCTCTCACACCACCGTTT+AGG | - | chr8_2:60112531-60112550 | Msa1258840:three_prime_UTR | 45.0% | |
| TTCTCTCACACCACCGTTTA+GGG | - | chr8_2:60112532-60112551 | Msa1258840:three_prime_UTR | 45.0% | |
| CGTTGTTGCAGTTTCCGATT+TGG | - | chr8_2:60112578-60112597 | Msa1258840:three_prime_UTR | 45.0% | |
| GAACTGGAATCTTCTGTGCT+TGG | + | chr8_2:60112644-60112663 | None:intergenic | 45.0% | |
| TGATCAGCAAGCAATGTCGA+CGG | + | chr8_2:60113105-60113124 | None:intergenic | 45.0% | |
| ! | GGTCGCATTCTGGAAAGTTA+GGG | - | chr8_2:60113193-60113212 | Msa1258840:CDS | 45.0% |
| AGGGTGAGTTGTGTGTTCTT+TGG | - | chr8_2:60113226-60113245 | Msa1258840:CDS | 45.0% | |
| CTTTCTTCCCATCATTCCCA+AGG | - | chr8_2:60114020-60114039 | Msa1258840:CDS | 45.0% | |
| TTTCCACCCTTGGGAATGAT+GGG | + | chr8_2:60114030-60114049 | None:intergenic | 45.0% | |
| TTGATCATGAGGTACAGAGG+TGG | - | chr8_2:60114150-60114169 | Msa1258840:CDS | 45.0% | |
| TAGCCCTGAATTTGGGAGAA+AGG | + | chr8_2:60114346-60114365 | None:intergenic | 45.0% | |
| GTCTGTTTGGAAGATTGGAG+GGG | + | chr8_2:60114730-60114749 | None:intergenic | 45.0% | |
| GGTCTGTTTGGAAGATTGGA+GGG | + | chr8_2:60114731-60114750 | None:intergenic | 45.0% | |
| GTAGTTCCAACCAGCTCATA+GGG | + | chr8_2:60114883-60114902 | None:intergenic | 45.0% | |
| AGTAGTTCCAACCAGCTCAT+AGG | + | chr8_2:60114884-60114903 | None:intergenic | 45.0% | |
| AACTACTGTTACTGACCCCT+TGG | - | chr8_2:60114897-60114916 | Msa1258840:intron | 45.0% | |
| GCATCTGACCTAAGAGAACT+TGG | - | chr8_2:60114988-60115007 | Msa1258840:CDS | 45.0% | |
| CACTTGAGCCAAGTTCTCTT+AGG | + | chr8_2:60114999-60115018 | None:intergenic | 45.0% | |
| TTGTTTCCATGGCAATGGAC+AGG | - | chr8_2:60115046-60115065 | Msa1258840:CDS | 45.0% | |
| ATCTGCTGATGATCTTGCAG+TGG | - | chr8_2:60115170-60115189 | Msa1258840:intron | 45.0% | |
| TGATCTTGCAGTGGATATCC+TGG | - | chr8_2:60115179-60115198 | Msa1258840:intron | 45.0% | |
| AGCTGAGAGATAGCTCTTCT+CGG | + | chr8_2:60115334-60115353 | None:intergenic | 45.0% | |
| GTCTTTCCACAAGTTCTGCA+TGG | + | chr8_2:60115362-60115381 | None:intergenic | 45.0% | |
| CAGAACTTGTGGAAAGACGA+TGG | - | chr8_2:60115364-60115383 | Msa1258840:intron | 45.0% | |
| GAACTTGTGGAAAGACGATG+GGG | - | chr8_2:60115366-60115385 | Msa1258840:intron | 45.0% | |
| CAACTCACGTATACACCTAC+AGG | + | chr8_2:60115481-60115500 | None:intergenic | 45.0% | |
| CTGTAGGTGTATACGTGAGT+TGG | - | chr8_2:60115479-60115498 | Msa1258840:intron | 45.0% | |
| AGTTGCATTCTTCCATCACG+AGG | - | chr8_2:60115503-60115522 | Msa1258840:intron | 45.0% | |
| AATCTCCATGGCAAGTACCA+GGG | + | chr8_2:60115541-60115560 | None:intergenic | 45.0% | |
| TTCTGCTGAAGGAATCTCCA+TGG | + | chr8_2:60115553-60115572 | None:intergenic | 45.0% | |
| AGTTCCAGCCAAATGGTGAA+AGG | - | chr8_2:60115621-60115640 | Msa1258840:intron | 45.0% | |
| GTTCCAGCCAAATGGTGAAA+GGG | - | chr8_2:60115622-60115641 | Msa1258840:intron | 45.0% | |
| AAACCCTTTCACCATTTGGC+TGG | + | chr8_2:60115628-60115647 | None:intergenic | 45.0% | |
| ! | GGTGAAAGGGTTTTCTCGAT+TGG | - | chr8_2:60115635-60115654 | Msa1258840:intron | 45.0% |
| ! | GGGTTTTCTCGATTGGAAGA+AGG | - | chr8_2:60115642-60115661 | Msa1258840:intron | 45.0% |
| GGGGACAAATGACAGAAACA+AGG | + | chr8_2:60115706-60115725 | None:intergenic | 45.0% | |
| ! | GTTTCTGTCATTTGTCCCCA+AGG | - | chr8_2:60115707-60115726 | Msa1258840:intron | 45.0% |
| CCATCCTTCAGATATTGCCT+TGG | + | chr8_2:60115727-60115746 | None:intergenic | 45.0% | |
| CCAAGGCAATATCTGAAGGA+TGG | - | chr8_2:60115724-60115743 | Msa1258840:intron | 45.0% | |
| CCAATCCAGCTGGTGAAAAT+GGG | - | chr8_2:60115763-60115782 | Msa1258840:intron | 45.0% | |
| CAATCCAGCTGGTGAAAATG+GGG | - | chr8_2:60115764-60115783 | Msa1258840:intron | 45.0% | |
| ! | AATTCCCCATTTTCACCAGC+TGG | + | chr8_2:60115771-60115790 | None:intergenic | 45.0% |
| TCTAGGCTTCGAATGAGTTC+AGG | + | chr8_2:60115876-60115895 | None:intergenic | 45.0% | |
| GGACCGAAAGAACAGAGAAA+AGG | - | chr8_2:60115956-60115975 | Msa1258840:intron | 45.0% | |
| !!! | GCTTGCTCTGTTTTTAGCTC+GGG | - | chr8_2:60116109-60116128 | Msa1258840:intron | 45.0% |
| TGTACTTGCCCCATTGAACT+TGG | - | chr8_2:60116145-60116164 | Msa1258840:intron | 45.0% | |
| AGACTACCACCAAAATGCAG+TGG | - | chr8_2:60116182-60116201 | Msa1258840:intron | 45.0% | |
| ! | TCACTACCACTGCATTTTGG+TGG | + | chr8_2:60116191-60116210 | None:intergenic | 45.0% |
| ! | TGGTAGTGAAACTGTGCGTA+TGG | - | chr8_2:60116202-60116221 | Msa1258840:intron | 45.0% |
| GTGAAAGGCTATTGAGATGC+TGG | - | chr8_2:60116255-60116274 | Msa1258840:intron | 45.0% | |
| GAAAGGCTATTGAGATGCTG+GGG | - | chr8_2:60116257-60116276 | Msa1258840:intron | 45.0% | |
| GGACAAGATCACAAAGCTCT+TGG | - | chr8_2:60116313-60116332 | Msa1258840:CDS | 45.0% | |
| CAAGATCACAAAGCTCTTGG+AGG | - | chr8_2:60116316-60116335 | Msa1258840:CDS | 45.0% | |
| ! | CTCTTGGAGGAGTATGAAAG+TGG | - | chr8_2:60116329-60116348 | Msa1258840:CDS | 45.0% |
| ! | CTTGGAGGAGTATGAAAGTG+GGG | - | chr8_2:60116331-60116350 | Msa1258840:CDS | 45.0% |
| ! | TTGGAGGAGTATGAAAGTGG+GGG | - | chr8_2:60116332-60116351 | Msa1258840:CDS | 45.0% |
| ATGCCAGTGTATTCGTGACT+TGG | - | chr8_2:60116370-60116389 | Msa1258840:CDS | 45.0% | |
| TGCCAGTGTATTCGTGACTT+GGG | - | chr8_2:60116371-60116390 | Msa1258840:CDS | 45.0% | |
| GATGCCTTTCTTCAACCATG+AGG | - | chr8_2:60116394-60116413 | Msa1258840:CDS | 45.0% | |
| ! | GAAAGCTTTGGTTATGGCCA+TGG | - | chr8_2:60116424-60116443 | Msa1258840:CDS | 45.0% |
| ACCACCAATCAGCTGACTAA+AGG | - | chr8_2:60116506-60116525 | Msa1258840:CDS | 45.0% | |
| TCCTTTAGTCAGCTGATTGG+TGG | + | chr8_2:60116510-60116529 | None:intergenic | 45.0% | |
| AGCTGACTAAAGGATTCACC+CGG | - | chr8_2:60116516-60116535 | Msa1258840:exon | 45.0% | |
| ATCAAGACCCTCCTTAATCC+GGG | + | chr8_2:60116537-60116556 | None:intergenic | 45.0% | |
| CATCAAGACCCTCCTTAATC+CGG | + | chr8_2:60116538-60116557 | None:intergenic | 45.0% | |
| ! | TAAGGAGGGTCTTGATGATC+TGG | - | chr8_2:60116541-60116560 | Msa1258840:five_prime_UTR | 45.0% |
| !! | GGGTAGTTTTGCTAGACATC+TGG | + | chr8_2:60116662-60116681 | None:intergenic | 45.0% |
| GATGTCTAGCAAAACTACCC+AGG | - | chr8_2:60116662-60116681 | Msa1258840:intron | 45.0% | |
| TGTTGTCCTCCCATTGAAGA+TGG | - | chr8_2:60116688-60116707 | Msa1258840:intron | 45.0% | |
| GTTGTCCTCCCATTGAAGAT+GGG | - | chr8_2:60116689-60116708 | Msa1258840:intron | 45.0% | |
| ! | CACTGAGGTTCCTGTTACTT+CGG | - | chr8_2:60116783-60116802 | Msa1258840:intron | 45.0% |
| GAAAATTGGAGACCGAAACC+AGG | + | chr8_2:60116987-60117006 | None:intergenic | 45.0% | |
| !!! | ATTTTAAATATTTTGAAAAT+TGG | + | chr8_2:60117001-60117020 | None:intergenic | 5.0% |
| TCCACTGTCTTCTCCTGTCT+TGG | - | chr8_2:60112605-60112624 | Msa1258840:three_prime_UTR | 50.0% | |
| CATCACATCAAAGCTCCTGC+TGG | - | chr8_2:60113126-60113145 | Msa1258840:CDS | 50.0% | |
| ! | CGGTCGCATTCTGGAAAGTT+AGG | - | chr8_2:60113192-60113211 | Msa1258840:CDS | 50.0% |
| ! | CGCATTCTGGAAAGTTAGGG+CGG | - | chr8_2:60113196-60113215 | Msa1258840:CDS | 50.0% |
| ! | GCATTCTGGAAAGTTAGGGC+GGG | - | chr8_2:60113197-60113216 | Msa1258840:CDS | 50.0% |
| !! | AAAGTTAGGGCGGGCTAAGA+AGG | - | chr8_2:60113206-60113225 | Msa1258840:CDS | 50.0% |
| !! | AAGTTAGGGCGGGCTAAGAA+GGG | - | chr8_2:60113207-60113226 | Msa1258840:CDS | 50.0% |
| CTTTCCACCCTTGGGAATGA+TGG | + | chr8_2:60114031-60114050 | None:intergenic | 50.0% | |
| GGTCATCTTGTGGATGCAGA+TGG | - | chr8_2:60114437-60114456 | Msa1258840:CDS | 50.0% | |
| TTTGGAAGATTGGAGGGGAG+GGG | + | chr8_2:60114725-60114744 | None:intergenic | 50.0% | |
| GTTTGGAAGATTGGAGGGGA+GGG | + | chr8_2:60114726-60114745 | None:intergenic | 50.0% | |
| TGTTTGGAAGATTGGAGGGG+AGG | + | chr8_2:60114727-60114746 | None:intergenic | 50.0% | |
| GGGTCTGTTTGGAAGATTGG+AGG | + | chr8_2:60114732-60114751 | None:intergenic | 50.0% | |
| TAGGAACCCTATGAGCTGGT+TGG | - | chr8_2:60114874-60114893 | Msa1258840:intron | 50.0% | |
| ! | GCGACTTGTTTCCATGGCAA+TGG | - | chr8_2:60115041-60115060 | Msa1258840:CDS | 50.0% |
| ATCATGCCTGTCCATTGCCA+TGG | + | chr8_2:60115055-60115074 | None:intergenic | 50.0% | |
| GGCAATGGACAGGCATGATA+AGG | - | chr8_2:60115056-60115075 | Msa1258840:CDS | 50.0% | |
| AGTCCCACACAGATTAGGGA+TGG | - | chr8_2:60115129-60115148 | Msa1258840:intron | 50.0% | |
| CAAGGATGTCAACTGCATCC+AGG | + | chr8_2:60115200-60115219 | None:intergenic | 50.0% | |
| CACGTGCCAGGAATAAAGCA+AGG | + | chr8_2:60115218-60115237 | None:intergenic | 50.0% | |
| GCTCTTCCGGAATCTTCCAA+GGG | - | chr8_2:60115288-60115307 | Msa1258840:intron | 50.0% | |
| TCAGCTCCCTTGGAAGATTC+CGG | + | chr8_2:60115297-60115316 | None:intergenic | 50.0% | |
| TCCACACCATGCAGAACTTG+TGG | - | chr8_2:60115353-60115372 | Msa1258840:intron | 50.0% | |
| TCCACAAGTTCTGCATGGTG+TGG | + | chr8_2:60115357-60115376 | None:intergenic | 50.0% | |
| CCTTCTTCACAACCTCGTGA+TGG | + | chr8_2:60115518-60115537 | None:intergenic | 50.0% | |
| CCATCACGAGGTTGTGAAGA+AGG | - | chr8_2:60115515-60115534 | Msa1258840:intron | 50.0% | |
| GAATCTCCATGGCAAGTACC+AGG | + | chr8_2:60115542-60115561 | None:intergenic | 50.0% | |
| GTCCCCAAGGCAATATCTGA+AGG | - | chr8_2:60115720-60115739 | Msa1258840:intron | 50.0% | |
| !! | TTCACCAGCTGGATTGGCAA+AGG | + | chr8_2:60115760-60115779 | None:intergenic | 50.0% |
| GCCAATCCAGCTGGTGAAAA+TGG | - | chr8_2:60115762-60115781 | Msa1258840:intron | 50.0% | |
| ! | CCCATTTTCACCAGCTGGAT+TGG | + | chr8_2:60115766-60115785 | None:intergenic | 50.0% |
| CAGGTGCTCCAAGATCTTCT+AGG | + | chr8_2:60115893-60115912 | None:intergenic | 50.0% | |
| ! | TGGAGGAGTATGAAAGTGGG+GGG | - | chr8_2:60116333-60116352 | Msa1258840:CDS | 50.0% |
| TATGAAAGTGGGGGGGTTGT+CGG | - | chr8_2:60116341-60116360 | Msa1258840:CDS | 50.0% | |
| GCCAGTGTATTCGTGACTTG+GGG | - | chr8_2:60116372-60116391 | Msa1258840:CDS | 50.0% | |
| TCCCCAAGTCACGAATACAC+TGG | + | chr8_2:60116376-60116395 | None:intergenic | 50.0% | |
| !! | TAGGATGCTGGATTTGCTGC+AGG | - | chr8_2:60116460-60116479 | Msa1258840:CDS | 50.0% |
| !! | TCAGCTGATTGGTGGTGATG+AGG | + | chr8_2:60116502-60116521 | None:intergenic | 50.0% |
| AGGATTCACCCGGATTAAGG+AGG | - | chr8_2:60116526-60116545 | Msa1258840:exon | 50.0% | |
| GGATTCACCCGGATTAAGGA+GGG | - | chr8_2:60116527-60116546 | Msa1258840:exon | 50.0% | |
| TCTGGACATTCCAAACGCCA+AGG | - | chr8_2:60116565-60116584 | Msa1258840:intron | 50.0% | |
| GGGGCAGAGGAATCAAATGA+TGG | + | chr8_2:60116641-60116660 | None:intergenic | 50.0% | |
| TCTCTGGATGAAGGGTCTGT+TGG | - | chr8_2:60116891-60116910 | Msa1258840:five_prime_UTR | 50.0% | |
| GCCAAGACAGGAGAAGACAG+TGG | + | chr8_2:60112609-60112628 | None:intergenic | 55.0% | |
| ! | TCCTGTCTTGGCTCGAGATC+CGG | - | chr8_2:60112617-60112636 | Msa1258840:three_prime_UTR | 55.0% |
| GGAATCTTCTGTGCTTGGCC+CGG | + | chr8_2:60112639-60112658 | None:intergenic | 55.0% | |
| AGCAATGTCGACGGCGACTT+AGG | + | chr8_2:60113096-60113115 | None:intergenic | 55.0% | |
| CACATCAAAGCTCCTGCTGG+TGG | - | chr8_2:60113129-60113148 | Msa1258840:CDS | 55.0% | |
| CAAAGCTCCTGCTGGTGGTA+AGG | - | chr8_2:60113134-60113153 | Msa1258840:CDS | 55.0% | |
| GTGGTAAGGCACAGACTGCT+GGG | - | chr8_2:60113148-60113167 | Msa1258840:CDS | 55.0% | |
| AGACTGCTGGGATTGCTGTG+AGG | - | chr8_2:60113160-60113179 | Msa1258840:CDS | 55.0% | |
| TTGCTGTGAGGCATGTGCGT+CGG | - | chr8_2:60113172-60113191 | Msa1258840:CDS | 55.0% | |
| CTTCCCATCATTCCCAAGGG+TGG | - | chr8_2:60114024-60114043 | Msa1258840:CDS | 55.0% | |
| CTTGTGGATGCAGATGGTGC+TGG | - | chr8_2:60114443-60114462 | Msa1258840:CDS | 55.0% | |
| !! | TGCAGATGGTGCTGGTGGTA+AGG | - | chr8_2:60114451-60114470 | Msa1258840:CDS | 55.0% |
| !! | GCAGATGGTGCTGGTGGTAA+GGG | - | chr8_2:60114452-60114471 | Msa1258840:CDS | 55.0% |
| !! | TGCTGGTGGTAAGGGCACTT+GGG | - | chr8_2:60114460-60114479 | Msa1258840:CDS | 55.0% |
| TTGGAGGGGAGGGGATTAGA+GGG | + | chr8_2:60114701-60114720 | None:intergenic | 55.0% | |
| ATTGGAGGGGAGGGGATTAG+AGG | + | chr8_2:60114702-60114721 | None:intergenic | 55.0% | |
| AAGATTGGAGGGGAGGGGAT+TGG | + | chr8_2:60114720-60114739 | None:intergenic | 55.0% | |
| CATCAACAACAGCACGTGCC+AGG | + | chr8_2:60115230-60115249 | None:intergenic | 55.0% | |
| TTCCACCAGCCTTTCTTGCC+AGG | - | chr8_2:60115256-60115275 | Msa1258840:intron | 55.0% | |
| TCCACCAGCCTTTCTTGCCA+GGG | - | chr8_2:60115257-60115276 | Msa1258840:intron | 55.0% | |
| CTTCCTTGCCCTGGCAAGAA+AGG | + | chr8_2:60115268-60115287 | None:intergenic | 55.0% | |
| CTTTCTTGCCAGGGCAAGGA+AGG | - | chr8_2:60115266-60115285 | Msa1258840:intron | 55.0% | |
| GGCTCTTCCGGAATCTTCCA+AGG | - | chr8_2:60115287-60115306 | Msa1258840:intron | 55.0% | |
| GGAATCTTCCAAGGGAGCTG+AGG | - | chr8_2:60115296-60115315 | Msa1258840:intron | 55.0% | |
| CTTGACTACCTCAGCTCCCT+TGG | + | chr8_2:60115307-60115326 | None:intergenic | 55.0% | |
| CTTGTGGAAAGACGATGGGG+TGG | - | chr8_2:60115369-60115388 | Msa1258840:intron | 55.0% | |
| GCGAGACACTTGAAGCCTGT+AGG | - | chr8_2:60115463-60115482 | Msa1258840:intron | 55.0% | |
| GCTTCCTTTGCCAATCCAGC+TGG | - | chr8_2:60115753-60115772 | Msa1258840:intron | 55.0% | |
| CTCTCTTCTGCTCGTCATGC+AGG | - | chr8_2:60116233-60116252 | Msa1258840:intron | 55.0% | |
| CTGCTCGTCATGCAGGTGAA+AGG | - | chr8_2:60116240-60116259 | Msa1258840:intron | 55.0% | |
| AGGCTATTGAGATGCTGGGG+CGG | - | chr8_2:60116260-60116279 | Msa1258840:intron | 55.0% | |
| ! | ATGGGCTGTGGAGGATGCTA+AGG | - | chr8_2:60116292-60116311 | Msa1258840:intron | 55.0% |
| ! | GGAGGAGTATGAAAGTGGGG+GGG | - | chr8_2:60116334-60116353 | Msa1258840:CDS | 55.0% |
| !! | CTGCAGGAGTGCTTCAGTGA+AGG | - | chr8_2:60116476-60116495 | Msa1258840:CDS | 55.0% |
| ! | GGGTCTTGATGATCTGGCTC+TGG | - | chr8_2:60116547-60116566 | Msa1258840:intron | 55.0% |
| TGTGGAGCATGCACAGACCA+AGG | - | chr8_2:60116604-60116623 | Msa1258840:intron | 55.0% | |
| GTGGAGCATGCACAGACCAA+GGG | - | chr8_2:60116605-60116624 | Msa1258840:intron | 55.0% | |
| TGGAGCATGCACAGACCAAG+GGG | - | chr8_2:60116606-60116625 | Msa1258840:intron | 55.0% | |
| TGATGGTAGAAGCCACCCCT+TGG | + | chr8_2:60116624-60116643 | None:intergenic | 55.0% | |
| ! | TTGCTAGACATCTGGGGCAG+AGG | + | chr8_2:60116654-60116673 | None:intergenic | 55.0% |
| ATGGGAGGACAACATGCCCT+GGG | + | chr8_2:60116682-60116701 | None:intergenic | 55.0% | |
| AATGGGAGGACAACATGCCC+TGG | + | chr8_2:60116683-60116702 | None:intergenic | 55.0% | |
| ! | CCTGTCTTGGCTCGAGATCC+GGG | - | chr8_2:60112618-60112637 | Msa1258840:three_prime_UTR | 60.0% |
| ! | TGGGGAAATGGCGTCGAACG+AGG | - | chr8_2:60112999-60113018 | Msa1258840:CDS | 60.0% |
| ! | GGGGAAATGGCGTCGAACGA+GGG | - | chr8_2:60113000-60113019 | Msa1258840:CDS | 60.0% |
| GTCTGTGCCTTACCACCAGC+AGG | + | chr8_2:60113144-60113163 | None:intergenic | 60.0% | |
| GGTGGTAAGGCACAGACTGC+TGG | - | chr8_2:60113147-60113166 | Msa1258840:CDS | 60.0% | |
| ! | CATGTGCGTCGGTCGCATTC+TGG | - | chr8_2:60113183-60113202 | Msa1258840:CDS | 60.0% |
| ! | GTGGATGCAGATGGTGCTGG+TGG | - | chr8_2:60114446-60114465 | Msa1258840:CDS | 60.0% |
| !! | GTGCTGGTGGTAAGGGCACT+TGG | - | chr8_2:60114459-60114478 | Msa1258840:CDS | 60.0% |
| !! | GCTGGTGGTAAGGGCACTTG+GGG | - | chr8_2:60114461-60114480 | Msa1258840:CDS | 60.0% |
| !! | CTGGTGGTAAGGGCACTTGG+GGG | - | chr8_2:60114462-60114481 | Msa1258840:CDS | 60.0% |
| GGGCACTTGGGGGAAATTGC+TGG | - | chr8_2:60114472-60114491 | Msa1258840:CDS | 60.0% | |
| TTGGAGGGGAGGGGATTGGA+GGG | + | chr8_2:60114716-60114735 | None:intergenic | 60.0% | |
| ATTGGAGGGGAGGGGATTGG+AGG | + | chr8_2:60114717-60114736 | None:intergenic | 60.0% | |
| CTTGCCCTGGCAAGAAAGGC+TGG | + | chr8_2:60115264-60115283 | None:intergenic | 60.0% | |
| CAGCCTTTCTTGCCAGGGCA+AGG | - | chr8_2:60115262-60115281 | Msa1258840:intron | 60.0% | |
| CAGGGCAAGGAAGGCTCTTC+CGG | - | chr8_2:60115275-60115294 | Msa1258840:intron | 60.0% | |
| CGAGGTTGTGAAGAAGGCCC+TGG | - | chr8_2:60115521-60115540 | Msa1258840:intron | 60.0% | |
| GAAGGCCCTGGTACTTGCCA+TGG | - | chr8_2:60115533-60115552 | Msa1258840:intron | 60.0% | |
| GGCTATTGAGATGCTGGGGC+GGG | - | chr8_2:60116261-60116280 | Msa1258840:intron | 60.0% | |
| GCTATTGAGATGCTGGGGCG+GGG | - | chr8_2:60116262-60116281 | Msa1258840:intron | 60.0% | |
| CTATTGAGATGCTGGGGCGG+GGG | - | chr8_2:60116263-60116282 | Msa1258840:intron | 60.0% | |
| AGCATGCACAGACCAAGGGG+TGG | - | chr8_2:60116609-60116628 | Msa1258840:intron | 60.0% | |
| CCCGGATCTCGAGCCAAGAC+AGG | + | chr8_2:60112621-60112640 | None:intergenic | 65.0% | |
| TGGAGGGGAGGGGATTGGAG+GGG | + | chr8_2:60114715-60114734 | None:intergenic | 65.0% | |
| GCCCTGGCAAGAAAGGCTGG+TGG | + | chr8_2:60115261-60115280 | None:intergenic | 65.0% | |
| CGGAAGAGCCTTCCTTGCCC+TGG | + | chr8_2:60115277-60115296 | None:intergenic | 65.0% | |
| !! | GGGAACTGGATGGGCTGTGG+AGG | - | chr8_2:60116283-60116302 | Msa1258840:intron | 65.0% |
| GGGAGGGGATTGGAGGGGAG+GGG | + | chr8_2:60114710-60114729 | None:intergenic | 70.0% | |
| GGGGAGGGGATTGGAGGGGA+GGG | + | chr8_2:60114711-60114730 | None:intergenic | 70.0% | |
| AGGGGAGGGGATTGGAGGGG+AGG | + | chr8_2:60114712-60114731 | None:intergenic | 70.0% | |
| AGATGCTGGGGCGGGGGAAC+TGG | - | chr8_2:60116269-60116288 | Msa1258840:intron | 70.0% | |
| CTGGGGCGGGGGAACTGGAT+GGG | - | chr8_2:60116274-60116293 | Msa1258840:intron | 70.0% | |
| !! | CGGGGGAACTGGATGGGCTG+TGG | - | chr8_2:60116280-60116299 | Msa1258840:intron | 70.0% |
| GCTGGGGCGGGGGAACTGGA+TGG | - | chr8_2:60116273-60116292 | Msa1258840:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 60112468 | 60117067 | 60112468 | ID=Msa1258840;Name=Msa1258840 |
| chr8_2 | mRNA | 60112468 | 60117067 | 60112468 | ID=Msa1258840-mRNA-1;Parent=Msa1258840;Name=Msa1258840-mRNA-1;_AED=0.00;_eAED=0.00;_QI=250|1|1|1|0.66|0.5|4|397|703 |
| chr8_2 | exon | 60112468 | 60114658 | 60112468 | ID=Msa1258840-mRNA-1:exon:18864;Parent=Msa1258840-mRNA-1 |
| chr8_2 | exon | 60114985 | 60115079 | 60114985 | ID=Msa1258840-mRNA-1:exon:18863;Parent=Msa1258840-mRNA-1 |
| chr8_2 | exon | 60116307 | 60116560 | 60116307 | ID=Msa1258840-mRNA-1:exon:18862;Parent=Msa1258840-mRNA-1 |
| chr8_2 | exon | 60116849 | 60117067 | 60116849 | ID=Msa1258840-mRNA-1:exon:18861;Parent=Msa1258840-mRNA-1 |
| chr8_2 | five_prime_UTR | 60116849 | 60117067 | 60116849 | ID=Msa1258840-mRNA-1:five_prime_utr;Parent=Msa1258840-mRNA-1 |
| chr8_2 | five_prime_UTR | 60116530 | 60116560 | 60116530 | ID=Msa1258840-mRNA-1:five_prime_utr;Parent=Msa1258840-mRNA-1 |
| chr8_2 | CDS | 60116307 | 60116529 | 60116307 | ID=Msa1258840-mRNA-1:cds;Parent=Msa1258840-mRNA-1 |
| chr8_2 | CDS | 60114985 | 60115079 | 60114985 | ID=Msa1258840-mRNA-1:cds;Parent=Msa1258840-mRNA-1 |
| chr8_2 | CDS | 60112865 | 60114658 | 60112865 | ID=Msa1258840-mRNA-1:cds;Parent=Msa1258840-mRNA-1 |
| chr8_2 | three_prime_UTR | 60112468 | 60112864 | 60112468 | ID=Msa1258840-mRNA-1:three_prime_utr;Parent=Msa1258840-mRNA-1 |
| Gene Sequence |
| Protein sequence |
