Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0316140 | XP_013462803.1 | 85.287 | 401 | 37 | 3 | 1 | 379 | 1 | 401 | 0.0 | 674 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0316140 | sp|Q9LEB4|RBP45_NICPL | 53.209 | 374 | 133 | 9 | 21 | 371 | 55 | 409 | 1.69e-117 | 350 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011920 | Msa0316140 | -0.802371 | 5.791108e-49 | -8.615850e-47 |
| Msa0021400 | Msa0316140 | 0.802232 | 6.186644e-49 | -8.615850e-47 |
| Msa0029700 | Msa0316140 | 0.809657 | 1.697944e-50 | -8.615850e-47 |
| Msa0036560 | Msa0316140 | -0.803084 | 4.126981e-49 | -8.615850e-47 |
| Msa0064960 | Msa0316140 | 0.816446 | 5.506365e-52 | -8.615850e-47 |
| Msa0071640 | Msa0316140 | 0.828195 | 1.028918e-54 | -8.615850e-47 |
| Msa0077320 | Msa0316140 | 0.806457 | 8.151348e-50 | -8.615850e-47 |
| Msa0079320 | Msa0316140 | -0.835302 | 1.816075e-56 | -8.615850e-47 |
| Msa0080020 | Msa0316140 | 0.812652 | 3.806523e-51 | -8.615850e-47 |
| Msa0091300 | Msa0316140 | -0.841967 | 3.445565e-58 | -8.615850e-47 |
| Msa0099090 | Msa0316140 | -0.809269 | 2.056796e-50 | -8.615850e-47 |
| Msa0110240 | Msa0316140 | 0.833429 | 5.360283e-56 | -8.615850e-47 |
| Msa0119520 | Msa0316140 | 0.815568 | 8.650293e-52 | -8.615850e-47 |
| Msa0124960 | Msa0316140 | 0.814881 | 1.228984e-51 | -8.615850e-47 |
| Msa0127910 | Msa0316140 | -0.808325 | 3.274599e-50 | -8.615850e-47 |
| Msa0139280 | Msa0316140 | -0.818962 | 1.490667e-52 | -8.615850e-47 |
| Msa0154730 | Msa0316140 | 0.814200 | 1.739067e-51 | -8.615850e-47 |
| Msa0172110 | Msa0316140 | -0.810617 | 1.054611e-50 | -8.615850e-47 |
| Msa0174060 | Msa0316140 | -0.809389 | 1.938779e-50 | -8.615850e-47 |
| Msa0186400 | Msa0316140 | -0.801610 | 8.302031e-49 | -8.615850e-47 |
| Msa0191260 | Msa0316140 | 0.800934 | 1.141682e-48 | -8.615850e-47 |
| Msa0192890 | Msa0316140 | 0.811730 | 6.048720e-51 | -8.615850e-47 |
| Msa0196530 | Msa0316140 | 0.858277 | 9.199477e-63 | -8.615850e-47 |
| Msa0232660 | Msa0316140 | -0.801656 | 8.123728e-49 | -8.615850e-47 |
| Msa0238420 | Msa0316140 | 0.855895 | 4.638981e-62 | -8.615850e-47 |
| Msa0311900 | Msa0316140 | 0.824518 | 7.729809e-54 | -8.615850e-47 |
| Msa0316140 | Msa0321570 | 0.809977 | 1.449141e-50 | -8.615850e-47 |
| Msa0316140 | Msa0362440 | -0.805043 | 1.615174e-49 | -8.615850e-47 |
| Msa0316140 | Msa0387030 | 0.819438 | 1.161424e-52 | -8.615850e-47 |
| Msa0316140 | Msa0390590 | -0.810783 | 9.708309e-51 | -8.615850e-47 |
| Msa0316140 | Msa0432260 | -0.833126 | 6.379333e-56 | -8.615850e-47 |
| Msa0316140 | Msa0523970 | 0.818956 | 1.495589e-52 | -8.615850e-47 |
| Msa0316140 | Msa0526490 | -0.852912 | 3.381159e-61 | -8.615850e-47 |
| Msa0316140 | Msa0526500 | -0.819783 | 9.687745e-53 | -8.615850e-47 |
| Msa0316140 | Msa0563440 | 0.824862 | 6.411589e-54 | -8.615850e-47 |
| Msa0316140 | Msa0569580 | -0.810370 | 1.192355e-50 | -8.615850e-47 |
| Msa0316140 | Msa0569980 | -0.804799 | 1.815939e-49 | -8.615850e-47 |
| Msa0316140 | Msa0602320 | -0.804986 | 1.660144e-49 | -8.615850e-47 |
| Msa0316140 | Msa0603090 | 0.811119 | 8.209562e-51 | -8.615850e-47 |
| Msa0316140 | Msa0651870 | 0.828803 | 7.336506e-55 | -8.615850e-47 |
| Msa0316140 | Msa0651890 | 0.830461 | 2.899382e-55 | -8.615850e-47 |
| Msa0316140 | Msa0700410 | 0.818345 | 2.057843e-52 | -8.615850e-47 |
| Msa0316140 | Msa0702020 | -0.814273 | 1.675646e-51 | -8.615850e-47 |
| Msa0316140 | Msa0708840 | -0.808321 | 3.280324e-50 | -8.615850e-47 |
| Msa0316140 | Msa0752770 | -0.816870 | 4.425008e-52 | -8.615850e-47 |
| Msa0316140 | Msa0801320 | -0.807772 | 4.293760e-50 | -8.615850e-47 |
| Msa0316140 | Msa0829580 | 0.811363 | 7.268360e-51 | -8.615850e-47 |
| Msa0316140 | Msa1146980 | 0.805211 | 1.489274e-49 | -8.615850e-47 |
| Msa0316140 | Msa1197820 | 0.800914 | 1.152505e-48 | -8.615850e-47 |
| Msa0316140 | Msa1208530 | 0.832379 | 9.777139e-56 | -8.615850e-47 |
| Msa0316140 | Msa1213470 | -0.800309 | 1.530840e-48 | -8.615850e-47 |
| Msa0316140 | Msa1251500 | 0.807896 | 4.041011e-50 | -8.615850e-47 |
| Msa0316140 | Msa1258840 | 0.801981 | 6.967711e-49 | -8.615850e-47 |
| Msa0316140 | Msa1300370 | -0.801851 | 7.408669e-49 | -8.615850e-47 |
| Msa0316140 | Msa1330220 | 0.800560 | 1.361050e-48 | -8.615850e-47 |
| Msa0316140 | Msa1363270 | -0.817890 | 2.607584e-52 | -8.615850e-47 |
| Msa0316140 | Msa1363280 | -0.826558 | 2.540317e-54 | -8.615850e-47 |
| Msa0316140 | Msa1369830 | 0.837436 | 5.205233e-57 | -8.615850e-47 |
| Msa0316140 | Msa1372190 | -0.803398 | 3.553979e-49 | -8.615850e-47 |
| Msa0316140 | Msa1463890 | -0.804282 | 2.328419e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0316140 | MtrunA17_Chr2g0288251 | 85.287 | 401 | 37 | 3 | 1 | 379 | 1 | 401 | 0.0 | 674 |
| Msa0316140 | MtrunA17_Chr4g0074711 | 65.169 | 356 | 87 | 12 | 41 | 366 | 51 | 399 | 5.98e-148 | 424 |
| Msa0316140 | MtrunA17_Chr2g0328791 | 49.435 | 354 | 122 | 9 | 51 | 356 | 6 | 350 | 7.32e-98 | 297 |
| Msa0316140 | MtrunA17_Chr3g0133651 | 48.358 | 335 | 147 | 6 | 54 | 367 | 87 | 416 | 7.32e-96 | 292 |
| Msa0316140 | MtrunA17_Chr4g0045221 | 49.671 | 304 | 112 | 5 | 57 | 320 | 113 | 415 | 6.14e-92 | 283 |
| Msa0316140 | MtrunA17_Chr1g0153871 | 44.844 | 417 | 163 | 13 | 19 | 371 | 20 | 433 | 6.74e-91 | 280 |
| Msa0316140 | MtrunA17_Chr3g0139111 | 33.673 | 196 | 117 | 5 | 49 | 244 | 51 | 233 | 6.90e-26 | 108 |
| Msa0316140 | MtrunA17_Chr3g0139111 | 26.244 | 221 | 118 | 6 | 61 | 243 | 146 | 359 | 1.31e-12 | 68.9 |
| Msa0316140 | MtrunA17_Chr4g0070231 | 31.839 | 223 | 128 | 7 | 18 | 233 | 3 | 208 | 1.23e-24 | 104 |
| Msa0316140 | MtrunA17_Chr4g0070231 | 26.087 | 207 | 118 | 5 | 62 | 240 | 133 | 332 | 7.75e-15 | 75.5 |
| Msa0316140 | MtrunA17_Chr8g0344491 | 32.039 | 206 | 124 | 7 | 28 | 233 | 35 | 224 | 1.53e-22 | 98.6 |
| Msa0316140 | MtrunA17_Chr8g0344491 | 26.042 | 192 | 105 | 5 | 61 | 222 | 148 | 332 | 3.23e-13 | 70.5 |
| Msa0316140 | MtrunA17_Chr1g0177101 | 29.493 | 217 | 141 | 6 | 51 | 259 | 99 | 311 | 4.04e-22 | 95.5 |
| Msa0316140 | MtrunA17_Chr3g0116631 | 31.285 | 179 | 114 | 4 | 62 | 235 | 111 | 285 | 7.83e-20 | 88.6 |
| Msa0316140 | MtrunA17_Chr4g0044541 | 29.282 | 181 | 119 | 4 | 61 | 241 | 35 | 206 | 2.01e-18 | 87.0 |
| Msa0316140 | MtrunA17_Chr4g0044541 | 28.977 | 176 | 119 | 5 | 61 | 236 | 123 | 292 | 1.40e-15 | 78.6 |
| Msa0316140 | MtrunA17_Chr1g0153181 | 30.588 | 170 | 109 | 5 | 61 | 230 | 33 | 193 | 6.89e-18 | 85.5 |
| Msa0316140 | MtrunA17_Chr3g0134141 | 27.647 | 170 | 114 | 4 | 61 | 230 | 25 | 185 | 6.22e-17 | 82.4 |
| Msa0316140 | MtrunA17_Chr7g0267571 | 27.451 | 204 | 128 | 7 | 51 | 243 | 100 | 294 | 1.52e-16 | 79.7 |
| Msa0316140 | MtrunA17_Chr4g0058151 | 28.495 | 186 | 107 | 4 | 62 | 235 | 124 | 295 | 1.61e-16 | 79.3 |
| Msa0316140 | MtrunA17_Chr1g0181111 | 29.688 | 192 | 115 | 4 | 62 | 235 | 86 | 275 | 2.16e-16 | 78.6 |
| Msa0316140 | MtrunA17_Chr3g0110211 | 27.957 | 186 | 126 | 3 | 51 | 236 | 16 | 193 | 4.03e-16 | 79.0 |
| Msa0316140 | MtrunA17_Chr7g0265341 | 26.866 | 201 | 120 | 7 | 49 | 243 | 65 | 244 | 3.66e-15 | 77.0 |
| Msa0316140 | MtrunA17_Chr1g0179701 | 24.413 | 213 | 147 | 5 | 24 | 236 | 31 | 229 | 5.55e-15 | 76.3 |
| Msa0316140 | MtrunA17_Chr6g0465751 | 27.168 | 173 | 117 | 5 | 58 | 230 | 23 | 186 | 1.12e-13 | 72.4 |
| Msa0316140 | MtrunA17_Chr1g0201151 | 27.059 | 170 | 115 | 4 | 61 | 230 | 31 | 191 | 2.01e-13 | 71.6 |
| Msa0316140 | MtrunA17_Chr6g0466501 | 26.590 | 173 | 118 | 5 | 58 | 230 | 23 | 186 | 7.83e-13 | 69.7 |
| Msa0316140 | MtrunA17_Chr1g0190211 | 39.474 | 76 | 45 | 1 | 154 | 229 | 131 | 205 | 8.30e-12 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0316140 | AT1G11650.2 | 54.971 | 342 | 116 | 10 | 38 | 355 | 39 | 366 | 1.69e-115 | 342 |
| Msa0316140 | AT4G27000.1 | 54.131 | 351 | 121 | 7 | 38 | 354 | 45 | 389 | 9.41e-108 | 323 |
| Msa0316140 | AT5G54900.1 | 53.776 | 331 | 118 | 8 | 51 | 356 | 51 | 371 | 1.56e-107 | 321 |
| Msa0316140 | AT1G11650.1 | 70.149 | 201 | 55 | 3 | 38 | 236 | 39 | 236 | 7.42e-98 | 293 |
| Msa0316140 | AT5G19350.1 | 46.649 | 373 | 140 | 10 | 48 | 377 | 8 | 364 | 2.34e-92 | 283 |
| Msa0316140 | AT5G19350.2 | 46.757 | 370 | 140 | 10 | 48 | 377 | 8 | 360 | 8.64e-92 | 282 |
| Msa0316140 | AT1G49600.1 | 47.801 | 341 | 130 | 8 | 50 | 357 | 109 | 434 | 1.09e-90 | 280 |
| Msa0316140 | AT1G47490.1 | 44.557 | 395 | 181 | 10 | 4 | 372 | 48 | 430 | 2.35e-90 | 278 |
| Msa0316140 | AT3G19130.1 | 48.710 | 310 | 119 | 6 | 55 | 326 | 103 | 410 | 8.91e-89 | 275 |
| Msa0316140 | AT1G49600.3 | 49.502 | 301 | 120 | 4 | 50 | 320 | 109 | 407 | 2.91e-88 | 274 |
| Msa0316140 | AT1G49600.2 | 49.502 | 301 | 120 | 4 | 50 | 320 | 109 | 407 | 2.91e-88 | 274 |
| Msa0316140 | AT1G47500.1 | 45.480 | 354 | 158 | 8 | 45 | 372 | 88 | 432 | 2.28e-85 | 266 |
| Msa0316140 | AT1G47490.2 | 53.448 | 232 | 102 | 3 | 4 | 233 | 48 | 275 | 3.92e-76 | 238 |
| Msa0316140 | AT1G47500.2 | 58.115 | 191 | 77 | 2 | 45 | 233 | 88 | 277 | 3.16e-71 | 226 |
| Msa0316140 | AT1G54080.1 | 34.906 | 212 | 122 | 7 | 22 | 233 | 30 | 225 | 2.44e-27 | 112 |
| Msa0316140 | AT1G54080.2 | 34.259 | 216 | 122 | 8 | 22 | 233 | 30 | 229 | 1.35e-25 | 107 |
| Msa0316140 | AT3G14100.1 | 33.495 | 206 | 121 | 7 | 28 | 233 | 32 | 221 | 3.06e-25 | 106 |
| Msa0316140 | AT1G17370.1 | 32.039 | 206 | 124 | 7 | 28 | 233 | 27 | 216 | 5.69e-23 | 100 |
| Msa0316140 | AT1G17370.1 | 26.316 | 209 | 116 | 6 | 62 | 240 | 141 | 341 | 3.71e-12 | 67.8 |
| Msa0316140 | AT1G17370.2 | 32.039 | 206 | 124 | 7 | 28 | 233 | 27 | 216 | 5.71e-23 | 100 |
| Msa0316140 | AT1G17370.2 | 26.991 | 226 | 126 | 8 | 42 | 240 | 125 | 338 | 2.15e-12 | 68.6 |
| Msa0316140 | AT4G34110.1 | 27.717 | 184 | 124 | 4 | 61 | 244 | 37 | 211 | 3.01e-18 | 87.0 |
| Msa0316140 | AT4G34110.1 | 27.933 | 179 | 123 | 5 | 62 | 240 | 126 | 298 | 1.59e-13 | 72.4 |
| Msa0316140 | AT4G34110.1 | 24.873 | 197 | 124 | 5 | 54 | 235 | 209 | 396 | 2.12e-12 | 68.9 |
| Msa0316140 | AT3G52380.1 | 28.358 | 201 | 128 | 6 | 54 | 243 | 111 | 306 | 1.09e-17 | 83.6 |
| Msa0316140 | AT1G22760.1 | 25.152 | 330 | 205 | 11 | 7 | 318 | 8 | 313 | 1.11e-17 | 85.1 |
| Msa0316140 | AT5G50250.1 | 31.053 | 190 | 118 | 5 | 48 | 235 | 108 | 286 | 3.55e-17 | 81.6 |
| Msa0316140 | AT1G49760.1 | 29.143 | 175 | 115 | 4 | 61 | 235 | 46 | 211 | 6.17e-17 | 82.8 |
| Msa0316140 | AT1G49760.1 | 27.228 | 202 | 121 | 6 | 51 | 235 | 213 | 405 | 2.09e-14 | 75.1 |
| Msa0316140 | AT1G49760.2 | 29.143 | 175 | 115 | 4 | 61 | 235 | 46 | 211 | 6.17e-17 | 82.8 |
| Msa0316140 | AT1G49760.2 | 27.228 | 202 | 121 | 6 | 51 | 235 | 213 | 405 | 2.09e-14 | 75.1 |
| Msa0316140 | AT4G24770.1 | 30.435 | 184 | 110 | 4 | 62 | 237 | 152 | 325 | 1.13e-16 | 80.5 |
| Msa0316140 | AT4G24770.2 | 30.435 | 184 | 110 | 4 | 62 | 237 | 152 | 325 | 1.13e-16 | 80.5 |
| Msa0316140 | AT2G37220.1 | 29.439 | 214 | 126 | 5 | 44 | 237 | 77 | 285 | 1.03e-14 | 74.3 |
| Msa0316140 | AT2G18510.1 | 26.882 | 186 | 128 | 3 | 51 | 236 | 16 | 193 | 1.29e-14 | 75.1 |
| Msa0316140 | AT2G23350.1 | 24.653 | 288 | 181 | 9 | 59 | 318 | 133 | 412 | 4.87e-14 | 73.9 |
| Msa0316140 | AT2G23350.1 | 26.087 | 184 | 127 | 4 | 61 | 244 | 47 | 221 | 5.33e-14 | 73.9 |
| Msa0316140 | AT2G23350.1 | 26.238 | 202 | 123 | 7 | 51 | 235 | 214 | 406 | 9.49e-13 | 70.1 |
| Msa0316140 | AT4G13850.4 | 41.772 | 79 | 45 | 1 | 157 | 235 | 37 | 114 | 5.62e-14 | 68.6 |
| Msa0316140 | AT4G13850.3 | 43.373 | 83 | 45 | 2 | 157 | 239 | 37 | 117 | 6.20e-14 | 68.9 |
| Msa0316140 | AT4G13850.2 | 43.373 | 83 | 45 | 2 | 157 | 239 | 37 | 117 | 7.60e-14 | 68.9 |
| Msa0316140 | AT4G13850.1 | 43.373 | 83 | 45 | 2 | 157 | 239 | 37 | 117 | 8.49e-14 | 68.9 |
| Msa0316140 | AT2G36660.1 | 23.622 | 254 | 173 | 7 | 61 | 302 | 25 | 269 | 9.42e-14 | 73.2 |
| Msa0316140 | AT1G71770.1 | 27.059 | 170 | 114 | 5 | 61 | 230 | 60 | 219 | 1.70e-13 | 72.4 |
| Msa0316140 | AT1G71770.1 | 27.933 | 179 | 119 | 7 | 61 | 236 | 147 | 318 | 4.35e-13 | 71.2 |
| Msa0316140 | AT1G71770.2 | 27.059 | 170 | 114 | 5 | 61 | 230 | 60 | 219 | 1.70e-13 | 72.4 |
| Msa0316140 | AT1G71770.2 | 27.933 | 179 | 119 | 7 | 61 | 236 | 147 | 318 | 4.35e-13 | 71.2 |
| Msa0316140 | AT1G60000.1 | 29.545 | 176 | 116 | 4 | 62 | 235 | 87 | 256 | 2.01e-13 | 70.1 |
| Msa0316140 | AT3G04500.1 | 39.474 | 76 | 45 | 1 | 154 | 229 | 136 | 210 | 6.55e-12 | 65.5 |
| Msa0316140 | AT5G47620.1 | 28.477 | 151 | 102 | 3 | 62 | 207 | 8 | 157 | 6.71e-12 | 67.0 |
| Msa0316140 | AT5G47620.2 | 28.477 | 151 | 102 | 3 | 62 | 207 | 8 | 157 | 6.71e-12 | 67.0 |
| Msa0316140 | AT5G47620.5 | 28.477 | 151 | 102 | 3 | 62 | 207 | 8 | 157 | 6.71e-12 | 67.0 |
| Msa0316140 | AT3G16380.1 | 26.705 | 176 | 120 | 5 | 62 | 236 | 114 | 281 | 7.51e-12 | 67.0 |
| Msa0316140 | AT2G33410.1 | 31.613 | 155 | 96 | 2 | 62 | 207 | 8 | 161 | 8.72e-12 | 66.6 |
| Msa0316140 | AT1G48920.1 | 26.230 | 183 | 113 | 5 | 46 | 210 | 281 | 459 | 1.97e-11 | 65.9 |
Find 153 sgRNAs with CRISPR-Local
Find 370 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTACGCACAGTTGTGTTAT+TGG | 0.276538 | 2_4:+13018064 | None:intergenic |
| TCATCAGCAAGCAAATTTAA+AGG | 0.286109 | 2_4:+13017215 | None:intergenic |
| CTGAGGAGGCTGAGCGGATT+GGG | 0.307940 | 2_4:+13021612 | None:intergenic |
| GTTGTGATTGATAGGCTTAC+TGG | 0.319710 | 2_4:-13020210 | Msa0316140:CDS |
| GACAAAATGTTCGCCTTTCA+TGG | 0.326353 | 2_4:-13017695 | Msa0316140:CDS |
| TTCGGCTGAGTGGTGGCAGC+CGG | 0.333982 | 2_4:+13020060 | None:intergenic |
| CAGGGTGGTTATGAGAATTA+TGG | 0.335183 | 2_4:-13017497 | Msa0316140:CDS |
| TAGGCTTACTGGTAGGTCTA+AGG | 0.336332 | 2_4:-13020199 | Msa0316140:CDS |
| GTCAGAATTACAGATTGAAT+TGG | 0.341841 | 2_4:-13020380 | Msa0316140:CDS |
| CTGACCACCATTCGGCATAA+TGG | 0.348543 | 2_4:+13020398 | None:intergenic |
| ACTGGTAGGTCTAAGGGATA+TGG | 0.353776 | 2_4:-13020192 | Msa0316140:CDS |
| TATATTACCTGTTTGTTTGA+AGG | 0.362349 | 2_4:+13017663 | None:intergenic |
| CGCTGCTCCTCCTGCTGGAC+AGG | 0.368738 | 2_4:-13017471 | Msa0316140:CDS |
| GCTGAGGAGGCTGAGCGGAT+TGG | 0.376833 | 2_4:+13021611 | None:intergenic |
| CAATGTTACTAGCAATCAAA+TGG | 0.377030 | 2_4:+13017263 | None:intergenic |
| TAAAGGGATACAAGAGCCTT+TGG | 0.379996 | 2_4:+13017232 | None:intergenic |
| CCTGCTGCTGGTGGATATTA+CGG | 0.389047 | 2_4:-13017527 | Msa0316140:CDS |
| CAATGTGTATGGAAGTTATC+CGG | 0.390591 | 2_4:-13017444 | Msa0316140:CDS |
| GTACGCACAGTTGTGTTATT+GGG | 0.391359 | 2_4:+13018065 | None:intergenic |
| ACAGCAGCAACAACAGCAAA+TGG | 0.403314 | 2_4:-13017399 | Msa0316140:CDS |
| GGGCGAAAGTTGTGATTGAT+AGG | 0.409258 | 2_4:-13020218 | Msa0316140:CDS |
| CATCAGCAAGCAAATTTAAA+GGG | 0.415340 | 2_4:+13017216 | None:intergenic |
| AGAGAGAAAAGTTTGTGTCT+TGG | 0.422217 | 2_4:+13021821 | None:intergenic |
| TCAGCGCTGGCGGGCTGCTG+AGG | 0.435204 | 2_4:+13021595 | None:intergenic |
| GTTGTTGCTGCTGTGGGTGT+TGG | 0.436095 | 2_4:+13017408 | None:intergenic |
| ACTAGTCAATCAGAAGGTTA+TGG | 0.441162 | 2_4:-13020480 | Msa0316140:CDS |
| TTCTCGCTTTGTCCGCCACT+AGG | 0.442395 | 2_4:+13018092 | None:intergenic |
| AATGTTACTAGCAATCAAAT+GGG | 0.443839 | 2_4:+13017264 | None:intergenic |
| GGTATTGTTGCGGTGGTTGT+TGG | 0.444138 | 2_4:+13021701 | None:intergenic |
| GGTTACGCTGCTCCTCCTGC+TGG | 0.445011 | 2_4:-13017476 | Msa0316140:CDS |
| GGAGGAGCCATGCCGTGTCC+TGG | 0.452151 | 2_4:+13021733 | None:intergenic |
| GGAAGTTATCCGGGGTATCC+TGG | 0.454317 | 2_4:-13017434 | Msa0316140:CDS |
| TCAGAATTACAGATTGAATT+GGG | 0.455422 | 2_4:-13020379 | Msa0316140:CDS |
| GATTGGGCCGCCCACATAGC+TGG | 0.455583 | 2_4:+13021628 | None:intergenic |
| CCGTAATATCCACCAGCAGC+AGG | 0.455987 | 2_4:+13017527 | None:intergenic |
| CTGATGAGGTCCGTACTCTC+TGG | 0.456744 | 2_4:-13021576 | Msa0316140:CDS |
| AATTATCTATATACCTGCTT+CGG | 0.457585 | 2_4:-13021523 | Msa0316140:CDS |
| ATTTGCTGTTGTTGCTGCTG+TGG | 0.460723 | 2_4:+13017401 | None:intergenic |
| TGCTGTGGGTGTTGGTAACC+AGG | 0.462351 | 2_4:+13017416 | None:intergenic |
| AACGAGCCCTAAAAGTCTCC+TGG | 0.463019 | 2_4:+13020256 | None:intergenic |
| CGGCATGGCTCCTCCCACCA+TGG | 0.465301 | 2_4:-13021725 | Msa0316140:CDS |
| TTTGCTGTTGTTGCTGCTGT+GGG | 0.468115 | 2_4:+13017402 | None:intergenic |
| TGGTGAGAGGTCGTCGAGGC+AGG | 0.473256 | 2_4:-13020343 | Msa0316140:CDS |
| CATTTGATTGCTAGTAACAT+TGG | 0.473598 | 2_4:-13017262 | Msa0316140:three_prime_UTR |
| GGATCGGTGATTTGCAGTAC+TGG | 0.478598 | 2_4:-13021555 | Msa0316140:CDS |
| GCGCTGGCGGGCTGCTGAGG+AGG | 0.479390 | 2_4:+13021598 | None:intergenic |
| ACGCACTCCTTCAAACAAAC+AGG | 0.483228 | 2_4:-13017670 | Msa0316140:intron |
| TCGGCTGAGTGGTGGCAGCC+GGG | 0.484975 | 2_4:+13020061 | None:intergenic |
| CAGCAGCAGGGTAACCACCC+TGG | 0.488709 | 2_4:+13017540 | None:intergenic |
| TCAACAAGACCCATGAGGAT+TGG | 0.489460 | 2_4:-13020102 | Msa0316140:CDS |
| CTAGCAATCAAATGGGGAAG+AGG | 0.493907 | 2_4:+13017271 | None:intergenic |
| CAGGGTGGTTACCCTGCTGC+TGG | 0.494399 | 2_4:-13017539 | Msa0316140:CDS |
| TAGCAATCAAATGGGGAAGA+GGG | 0.494794 | 2_4:+13017272 | None:intergenic |
| TATATGAGAGACAAACCTTT+CGG | 0.494917 | 2_4:+13020042 | None:intergenic |
| ACAAAATGTTCGCCTTTCAT+GGG | 0.496313 | 2_4:-13017694 | Msa0316140:CDS |
| TGGATATTACGGCTATGCCC+AGG | 0.498954 | 2_4:-13017516 | Msa0316140:CDS |
| CTGTAATTCTGACCACCATT+CGG | 0.501561 | 2_4:+13020390 | None:intergenic |
| CACAACAACCGCCAGCTATG+TGG | 0.504918 | 2_4:-13021639 | Msa0316140:CDS |
| TTTGTGAGATTTGCTGATGA+GGG | 0.506475 | 2_4:-13020168 | Msa0316140:CDS |
| GGTGGTTGTTGGCCCATGGT+GGG | 0.509060 | 2_4:+13021712 | None:intergenic |
| TGTTACTGATTACCTTCTCC+AGG | 0.509993 | 2_4:-13020274 | Msa0316140:CDS |
| CATCAGGAGCTGTGCAGAAG+AGG | 0.510016 | 2_4:-13017751 | Msa0316140:intron |
| TCTCGCTTTGTCCGCCACTA+GGG | 0.510759 | 2_4:+13018093 | None:intergenic |
| GCAGCCCGCCAGCGCTGATG+AGG | 0.511476 | 2_4:-13021590 | Msa0316140:CDS |
| CCTGGTTGCATCATCTCTCT+CGG | 0.516245 | 2_4:+13021751 | None:intergenic |
| CCCTAAAAGTCTCCTGGAGA+AGG | 0.518946 | 2_4:+13020262 | None:intergenic |
| CTCGCCGGTGTTACCGAAGC+AGG | 0.520914 | 2_4:+13021510 | None:intergenic |
| GGATAACTTCCATACACATT+GGG | 0.521577 | 2_4:+13017446 | None:intergenic |
| AATGTGTATGGAAGTTATCC+GGG | 0.521666 | 2_4:-13017443 | Msa0316140:CDS |
| CGGATAACTTCCATACACAT+TGG | 0.523263 | 2_4:+13017445 | None:intergenic |
| ATGTTTGTTCTGCTGCATAA+TGG | 0.523588 | 2_4:-13019992 | Msa0316140:intron |
| GGACAGGATCCCAATGTGTA+TGG | 0.524626 | 2_4:-13017455 | Msa0316140:CDS |
| GCTGCTGTGGTGGTGGCTGT+TGG | 0.525112 | 2_4:+13021680 | None:intergenic |
| CGGTGGTTGTTGGCCCATGG+TGG | 0.525587 | 2_4:+13021711 | None:intergenic |
| GCTCGTTATAACTCTGTGAA+GGG | 0.526741 | 2_4:-13020240 | Msa0316140:CDS |
| TTGCGGTGGTTGTTGGCCCA+TGG | 0.528216 | 2_4:+13021708 | None:intergenic |
| GGTGGTTACCCTGCTGCTGG+TGG | 0.530682 | 2_4:-13017536 | Msa0316140:CDS |
| AATTGGGCAACTTTCAGTGC+TGG | 0.533382 | 2_4:-13020363 | Msa0316140:CDS |
| AGCAATCAAATGGGGAAGAG+GGG | 0.536247 | 2_4:+13017273 | None:intergenic |
| CAGCAGCAACAACAGCAAAT+GGG | 0.536514 | 2_4:-13017398 | Msa0316140:CDS |
| AGGCTTACTGGTAGGTCTAA+GGG | 0.537077 | 2_4:-13020198 | Msa0316140:CDS |
| AGCAGCAGGGTAACCACCCT+GGG | 0.537307 | 2_4:+13017541 | None:intergenic |
| CACATAGCTGGCGGTTGTTG+TGG | 0.538231 | 2_4:+13021640 | None:intergenic |
| AAGGAGTGCGTCCCCATGAA+AGG | 0.543141 | 2_4:+13017682 | None:intergenic |
| ACGGACCTCATCAGCGCTGG+CGG | 0.545644 | 2_4:+13021585 | None:intergenic |
| AGGTCGTCGAGGCAGGATGA+TGG | 0.546691 | 2_4:-13020336 | Msa0316140:CDS |
| GGCTCGTTATAACTCTGTGA+AGG | 0.546701 | 2_4:-13020241 | Msa0316140:CDS |
| GGTTGTTGGCCCATGGTGGG+AGG | 0.549182 | 2_4:+13021715 | None:intergenic |
| CGGACCTCATCAGCGCTGGC+GGG | 0.550273 | 2_4:+13021586 | None:intergenic |
| ACGTACGGCTGCTGTGGTGG+TGG | 0.551079 | 2_4:+13021673 | None:intergenic |
| ACATTGGGATCCTGTCCAGC+AGG | 0.553089 | 2_4:+13017461 | None:intergenic |
| AGTGGCAGGTCCAATCCTCA+TGG | 0.559052 | 2_4:+13020092 | None:intergenic |
| GGCATGGCTCCTCCCACCAT+GGG | 0.562530 | 2_4:-13021724 | Msa0316140:CDS |
| GCAGGGTAACCACCCTGGGT+TGG | 0.563661 | 2_4:+13017545 | None:intergenic |
| CGTAATATCCACCAGCAGCA+GGG | 0.575605 | 2_4:+13017528 | None:intergenic |
| TTGAACGGAACTTTATTGGG+TGG | 0.575973 | 2_4:-13017717 | Msa0316140:CDS |
| CGGTGATTTGCAGTACTGGA+TGG | 0.577072 | 2_4:-13021551 | Msa0316140:CDS |
| ACAACAACCGCCAGCTATGT+GGG | 0.578681 | 2_4:-13021638 | Msa0316140:CDS |
| GGGCTATGACTGAGATGCAA+GGG | 0.579569 | 2_4:-13020134 | Msa0316140:CDS |
| AATCACCGATCCAGAGAGTA+CGG | 0.579736 | 2_4:+13021566 | None:intergenic |
| CCGAGAGAGATGATGCAACC+AGG | 0.585288 | 2_4:-13021751 | Msa0316140:exon |
| ATAATTCTCATAACCACCCT+GGG | 0.588906 | 2_4:+13017499 | None:intergenic |
| GGCTGTTGGTATTGTTGCGG+TGG | 0.589555 | 2_4:+13021694 | None:intergenic |
| AAGAATCCTTATTCCACGAA+GGG | 0.590268 | 2_4:+13017305 | None:intergenic |
| TGATTGATAGGCTTACTGGT+AGG | 0.591076 | 2_4:-13020206 | Msa0316140:CDS |
| CAACTTTCAGTGCTGGTGAG+AGG | 0.591642 | 2_4:-13020356 | Msa0316140:CDS |
| CTCGTTATAACTCTGTGAAG+GGG | 0.593138 | 2_4:-13020239 | Msa0316140:CDS |
| GGTGGCTGTTGGTATTGTTG+CGG | 0.594122 | 2_4:+13021691 | None:intergenic |
| AGTACGGACCTCATCAGCGC+TGG | 0.598621 | 2_4:+13021582 | None:intergenic |
| ATAACGTACGGCTGCTGTGG+TGG | 0.602070 | 2_4:+13021670 | None:intergenic |
| GCAATCAAATGGGGAAGAGG+GGG | 0.607457 | 2_4:+13017274 | None:intergenic |
| ATCATAACGTACGGCTGCTG+TGG | 0.608287 | 2_4:+13021667 | None:intergenic |
| CATAATTCTCATAACCACCC+TGG | 0.609101 | 2_4:+13017498 | None:intergenic |
| AAGCAAACTAGTCAATCAGA+AGG | 0.612741 | 2_4:-13020486 | Msa0316140:CDS |
| AGAGTGCTTCTGACATACAA+TGG | 0.615716 | 2_4:-13020423 | Msa0316140:CDS |
| GAGGTCCGTACTCTCTGGAT+CGG | 0.617179 | 2_4:-13021571 | Msa0316140:CDS |
| GGATATTACGGCTATGCCCA+GGG | 0.617872 | 2_4:-13017515 | Msa0316140:CDS |
| GCTGCCACCACTCAGCCGAA+AGG | 0.617922 | 2_4:-13020057 | Msa0316140:CDS |
| GTGGCAGGTCCAATCCTCAT+GGG | 0.618279 | 2_4:+13020093 | None:intergenic |
| ATAGCTGGCGGTTGTTGTGG+TGG | 0.618727 | 2_4:+13021643 | None:intergenic |
| CTGATGAGGGTGAACAGATG+AGG | 0.619017 | 2_4:-13020155 | Msa0316140:CDS |
| CAAAATGTTCGCCTTTCATG+GGG | 0.619064 | 2_4:-13017693 | Msa0316140:CDS |
| TCGTTATAACTCTGTGAAGG+GGG | 0.622931 | 2_4:-13020238 | Msa0316140:CDS |
| CAAACCTTTCGGCTGAGTGG+TGG | 0.624684 | 2_4:+13020053 | None:intergenic |
| AGACAAACCTTTCGGCTGAG+TGG | 0.626497 | 2_4:+13020050 | None:intergenic |
| AGGGCTATGACTGAGATGCA+AGG | 0.628733 | 2_4:-13020135 | Msa0316140:CDS |
| TAAGAATCCTTATTCCACGA+AGG | 0.629680 | 2_4:+13017304 | None:intergenic |
| GAGATGATGCAACCAGGACA+CGG | 0.629747 | 2_4:-13021745 | Msa0316140:CDS |
| AGAAAGATATTATACCTCGC+CGG | 0.630596 | 2_4:+13021495 | None:intergenic |
| AATGGAACCATTATGCCGAA+TGG | 0.635772 | 2_4:-13020405 | Msa0316140:CDS |
| TATACCTGCTTCGGTAACAC+CGG | 0.640046 | 2_4:-13021514 | Msa0316140:CDS |
| TCAAAACAGTACTGTCACAA+AGG | 0.642504 | 2_4:+13017341 | None:intergenic |
| GATGCAACCAGGACACGGCA+TGG | 0.642660 | 2_4:-13021740 | Msa0316140:CDS |
| GGGCTGCTGAGGAGGCTGAG+CGG | 0.642669 | 2_4:+13021606 | None:intergenic |
| TTGGGATCCTGTCCAGCAGG+AGG | 0.643700 | 2_4:+13017464 | None:intergenic |
| GGAACCATTATGCCGAATGG+TGG | 0.645643 | 2_4:-13020402 | Msa0316140:CDS |
| GACTCAACAAGATCCAACCC+AGG | 0.647131 | 2_4:-13017558 | Msa0316140:CDS |
| TGGGCCGCCCACATAGCTGG+CGG | 0.657827 | 2_4:+13021631 | None:intergenic |
| TGATGAGGGTGAACAGATGA+GGG | 0.661600 | 2_4:-13020154 | Msa0316140:CDS |
| GGCTATGACTGAGATGCAAG+GGG | 0.668121 | 2_4:-13020133 | Msa0316140:CDS |
| TGTGGTGGCATCATAACGTA+CGG | 0.676809 | 2_4:+13021658 | None:intergenic |
| TGTTGGTAACCAGGATACCC+CGG | 0.677241 | 2_4:+13017425 | None:intergenic |
| ACAACCGCCAGCTATGTGGG+CGG | 0.687665 | 2_4:-13021635 | Msa0316140:CDS |
| GTGCTGGTGAGAGGTCGTCG+AGG | 0.694460 | 2_4:-13020347 | Msa0316140:CDS |
| TTTGTTCAACAAGACCCATG+AGG | 0.696574 | 2_4:-13020107 | Msa0316140:CDS |
| ACTCAACAAGATCCAACCCA+GGG | 0.701733 | 2_4:-13017557 | Msa0316140:CDS |
| GCAGCTTCGTATAACCCTAG+TGG | 0.702417 | 2_4:-13018107 | Msa0316140:intron |
| GCTTCGTATAACCCTAGTGG+CGG | 0.705338 | 2_4:-13018104 | Msa0316140:CDS |
| ATGTTACTAGCAATCAAATG+GGG | 0.706400 | 2_4:+13017265 | None:intergenic |
| ATGTGTATGGAAGTTATCCG+GGG | 0.708244 | 2_4:-13017442 | Msa0316140:CDS |
| CAACAAGATCCAACCCAGGG+TGG | 0.719050 | 2_4:-13017554 | Msa0316140:CDS |
| CTGCTTCGGTAACACCGGCG+AGG | 0.749783 | 2_4:-13021509 | Msa0316140:intron |
| TATTACGGCTATGCCCAGGG+TGG | 0.766971 | 2_4:-13017512 | Msa0316140:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTATTTTAATTTATAT+TGG | - | chr2_4:13020460-13020479 | Msa0316140:CDS | 0.0% |
| !!! | ATTTTTTATTGATTGATTAT+TGG | - | chr2_4:13017499-13017518 | Msa0316140:CDS | 10.0% |
| !!! | AAATTAGATTTTGTAATTTT+GGG | - | chr2_4:13017796-13017815 | Msa0316140:intron | 10.0% |
| !!! | AATTTTCCTTTAAAAAAATT+GGG | - | chr2_4:13019114-13019133 | Msa0316140:intron | 10.0% |
| !!! | TAATTGTTTTTACTTTTTAA+AGG | - | chr2_4:13019765-13019784 | Msa0316140:intron | 10.0% |
| !!! | GAAATTAGATTTTGTAATTT+TGG | - | chr2_4:13017795-13017814 | Msa0316140:intron | 15.0% |
| !!! | CAATTTTCCTTTAAAAAAAT+TGG | - | chr2_4:13019113-13019132 | Msa0316140:intron | 15.0% |
| !!! | ATCCAATAATTTTTAAGTAA+AGG | - | chr2_4:13020064-13020083 | Msa0316140:CDS | 15.0% |
| !!! | TGTATTGAATTTGATTTATA+TGG | - | chr2_4:13020427-13020446 | Msa0316140:CDS | 15.0% |
| !!! | AGTGTTATTTTTTTATTTGA+TGG | - | chr2_4:13020534-13020553 | Msa0316140:intron | 15.0% |
| !! | ACTATTTATTTAATAACCAA+AGG | + | chr2_4:13020693-13020712 | None:intergenic | 15.0% |
| !!! | AAATTAGGGTGTTTTAATAT+TGG | - | chr2_4:13017651-13017670 | Msa0316140:intron | 20.0% |
| !!! | GAAATTAGGGTTTTTAATTT+TGG | - | chr2_4:13017699-13017718 | Msa0316140:CDS | 20.0% |
| !! | TTTATCCTATTTGTGAAATT+AGG | - | chr2_4:13017733-13017752 | Msa0316140:CDS | 20.0% |
| !! | TTATCCTATTTGTGAAATTA+GGG | - | chr2_4:13017734-13017753 | Msa0316140:CDS | 20.0% |
| !!! | GAAATTAGGGTTTTTAATTT+TGG | - | chr2_4:13017699-13017718 | Msa0316140:CDS | 20.0% |
| !!! | TTTATTTTGTTAGTGAAATC+AGG | - | chr2_4:13017829-13017848 | Msa0316140:intron | 20.0% |
| !!! | TTATTTTGTTAGTGAAATCA+GGG | - | chr2_4:13017830-13017849 | Msa0316140:intron | 20.0% |
| !!! | AGCTGTTTTTAAAACTATAT+CGG | - | chr2_4:13018063-13018082 | Msa0316140:intron | 20.0% |
| !!! | ACAATTTTCACAATCTTTTT+TGG | + | chr2_4:13018107-13018126 | None:intergenic | 20.0% |
| !!! | TTTATTCTGTTTTTGAAAGT+AGG | - | chr2_4:13018248-13018267 | Msa0316140:intron | 20.0% |
| !!! | TTATTCTGTTTTTGAAAGTA+GGG | - | chr2_4:13018249-13018268 | Msa0316140:intron | 20.0% |
| !!! | AAATTTGGGTTTTGAAATTT+TGG | - | chr2_4:13018312-13018331 | Msa0316140:intron | 20.0% |
| !! | ATTATTCTGTTAGTGAAATT+TGG | - | chr2_4:13018350-13018369 | Msa0316140:intron | 20.0% |
| !! | TTATTCTGTTAGTGAAATTT+GGG | - | chr2_4:13018351-13018370 | Msa0316140:intron | 20.0% |
| !!! | GTTTAAGTTATGATTCTTTT+CGG | - | chr2_4:13019048-13019067 | Msa0316140:intron | 20.0% |
| !!! | TTTTTTTAAAGGAAAATTGC+AGG | + | chr2_4:13019112-13019131 | None:intergenic | 20.0% |
| !!! | ATTTAGCCCAATTTTTTTAA+AGG | + | chr2_4:13019123-13019142 | None:intergenic | 20.0% |
| !! | TGAAATAAATAAACATTTGC+TGG | + | chr2_4:13019564-13019583 | None:intergenic | 20.0% |
| !!! | ATCTCAACATTTTTTTCTTA+TGG | + | chr2_4:13019603-13019622 | None:intergenic | 20.0% |
| !! | AAATATATGAGAAGAATAAG+AGG | + | chr2_4:13019638-13019657 | None:intergenic | 20.0% |
| !! | GTCCTTTACTTAAAAATTAT+TGG | + | chr2_4:13020069-13020088 | None:intergenic | 20.0% |
| !! | TTAAATTGATAGAAGAGTAA+AGG | - | chr2_4:13020145-13020164 | Msa0316140:CDS | 20.0% |
| !!! | TCTTTCATTATTCTAAAACA+GGG | + | chr2_4:13020227-13020246 | None:intergenic | 20.0% |
| !!! | TTTTTTTATTTGATGGTTTC+CGG | - | chr2_4:13020541-13020560 | Msa0316140:intron | 20.0% |
| !!! | TTTTCATTGTAGATTTTTGT+TGG | - | chr2_4:13020919-13020938 | Msa0316140:intron | 20.0% |
| !!! | ACGCTTCAAATTTTTTTATT+GGG | + | chr2_4:13021825-13021844 | None:intergenic | 20.0% |
| !!! | AACGCTTCAAATTTTTTTAT+TGG | + | chr2_4:13021826-13021845 | None:intergenic | 20.0% |
| ! | AATTATCTATATACCTGCTT+CGG | - | chr2_4:13017385-13017404 | Msa0316140:exon | 25.0% |
| ! | TCTCTCTTAATTGTAGAATT+AGG | - | chr2_4:13017435-13017454 | Msa0316140:CDS | 25.0% |
| ! | CTCTCTTAATTGTAGAATTA+GGG | - | chr2_4:13017436-13017455 | Msa0316140:CDS | 25.0% |
| !! | TTGATTATTGGTGTAAGTTT+TGG | - | chr2_4:13017511-13017530 | Msa0316140:CDS | 25.0% |
| ! | TTTATTCTGCTAGTGAATTT+AGG | - | chr2_4:13017546-13017565 | Msa0316140:CDS | 25.0% |
| ! | TTTATCCTGTTTGTGAAATT+AGG | - | chr2_4:13017685-13017704 | Msa0316140:CDS | 25.0% |
| ! | TTATCCTGTTTGTGAAATTA+GGG | - | chr2_4:13017686-13017705 | Msa0316140:CDS | 25.0% |
| ! | AAAACCCTAATTTCACAAAT+AGG | + | chr2_4:13017741-13017760 | None:intergenic | 25.0% |
| !! | TATTTTGTTAGTGAAATCAG+GGG | - | chr2_4:13017831-13017850 | Msa0316140:intron | 25.0% |
| !!! | AAAGTAGGGTATTGTAATTT+TGG | - | chr2_4:13018263-13018282 | Msa0316140:intron | 25.0% |
| !!! | GTATTGTAATTTTGGTTTGT+AGG | - | chr2_4:13018271-13018290 | Msa0316140:intron | 25.0% |
| ! | TTTATGCTGTTCGTAAAATT+TGG | - | chr2_4:13018297-13018316 | Msa0316140:intron | 25.0% |
| ! | TTATGCTGTTCGTAAAATTT+GGG | - | chr2_4:13018298-13018317 | Msa0316140:intron | 25.0% |
| ! | TCAGAATTACAGATTGAATT+GGG | - | chr2_4:13018529-13018548 | Msa0316140:intron | 25.0% |
| !! | ATGTTGGTTAGTTGAATTTA+AGG | - | chr2_4:13018980-13018999 | Msa0316140:intron | 25.0% |
| ! | ATACACTACAAAAGGTAATT+TGG | + | chr2_4:13019015-13019034 | None:intergenic | 25.0% |
| ! | AAAATGCCGCAAAAATATAA+CGG | + | chr2_4:13019308-13019327 | None:intergenic | 25.0% |
| ! | AGAGTAAAAACTAAACCAAA+AGG | + | chr2_4:13019367-13019386 | None:intergenic | 25.0% |
| ! | AACCAATAGGAGTAAATTAA+AGG | + | chr2_4:13019450-13019469 | None:intergenic | 25.0% |
| ! | AGTTCTTAAGAAAAACCAAT+AGG | + | chr2_4:13019463-13019482 | None:intergenic | 25.0% |
| ! | AATGTAAATAAGATCTGCTT+TGG | + | chr2_4:13019521-13019540 | None:intergenic | 25.0% |
| !!! | AACATTTTTTTCTTATGGAC+GGG | + | chr2_4:13019598-13019617 | None:intergenic | 25.0% |
| !!! | CAACATTTTTTTCTTATGGA+CGG | + | chr2_4:13019599-13019618 | None:intergenic | 25.0% |
| !! | TCAAACATTTTCAGACTTAA+AGG | + | chr2_4:13019691-13019710 | None:intergenic | 25.0% |
| !! | AGTAAAGGTATATCCAAATA+AGG | - | chr2_4:13020160-13020179 | Msa0316140:CDS | 25.0% |
| !!! | CTTTCATTATTCTAAAACAG+GGG | + | chr2_4:13020226-13020245 | None:intergenic | 25.0% |
| !!! | CTCTTTCATTATTCTAAAAC+AGG | + | chr2_4:13020228-13020247 | None:intergenic | 25.0% |
| !!! | CTGTTTTAGAATAATGAAAG+AGG | - | chr2_4:13020226-13020245 | Msa0316140:CDS | 25.0% |
| !!! | AAGTGACTAATTTGATTTTC+TGG | - | chr2_4:13020273-13020292 | Msa0316140:CDS | 25.0% |
| ! | CAAATTCAATACATAGTTGT+CGG | + | chr2_4:13020420-13020439 | None:intergenic | 25.0% |
| ! | TAAATAAATAGTTGCACCTT+TGG | - | chr2_4:13020674-13020693 | Msa0316140:intron | 25.0% |
| ! | TATATTACCTGTTTGTTTGA+AGG | + | chr2_4:13021248-13021267 | None:intergenic | 25.0% |
| ! | AATGTTACTAGCAATCAAAT+GGG | + | chr2_4:13021647-13021666 | None:intergenic | 25.0% |
| !!! | AATTAGGGCTTTATTTTGTG+TGG | - | chr2_4:13017451-13017470 | Msa0316140:CDS | 30.0% |
| TAAAACACCCTAATTTCTCA+AGG | + | chr2_4:13017647-13017666 | None:intergenic | 30.0% | |
| AAAACCCTAATTTCACAAAC+AGG | + | chr2_4:13017693-13017712 | None:intergenic | 30.0% | |
| !!! | GAAATCAGGGGTTTTAATTT+TGG | - | chr2_4:13017843-13017862 | Msa0316140:intron | 30.0% |
| AATAAGCAGTTTATCCAAAC+AGG | + | chr2_4:13017909-13017928 | None:intergenic | 30.0% | |
| ! | TAATGGATAAACTGCTTGTT+TGG | - | chr2_4:13017967-13017986 | Msa0316140:intron | 30.0% |
| GTCAGAATTACAGATTGAAT+TGG | - | chr2_4:13018528-13018547 | Msa0316140:intron | 30.0% | |
| !!! | TACCATTTTTGTTGGTGATT+TGG | - | chr2_4:13018604-13018623 | Msa0316140:intron | 30.0% |
| TATATGAGAGACAAACCTTT+CGG | + | chr2_4:13018869-13018888 | None:intergenic | 30.0% | |
| CTTACTAATATGTGTGATGT+TGG | - | chr2_4:13018964-13018983 | Msa0316140:intron | 30.0% | |
| AAAAGGTAATTTGGTACACA+AGG | + | chr2_4:13019006-13019025 | None:intergenic | 30.0% | |
| AAATGCCGCAAAAATATAAC+GGG | + | chr2_4:13019307-13019326 | None:intergenic | 30.0% | |
| TGACAAGAACTTGAAAATGT+AGG | + | chr2_4:13019339-13019358 | None:intergenic | 30.0% | |
| ! | CTCCTTTAATTTACTCCTAT+TGG | - | chr2_4:13019445-13019464 | Msa0316140:intron | 30.0% |
| GAGGAACAAATAAGAATAAG+AGG | + | chr2_4:13019669-13019688 | None:intergenic | 30.0% | |
| ! | AACATTTTCAGACTTAAAGG+AGG | + | chr2_4:13019688-13019707 | None:intergenic | 30.0% |
| GATAGAGATGATCAATTTCA+TGG | - | chr2_4:13019719-13019738 | Msa0316140:intron | 30.0% | |
| ! | TGGTTTTTATCTGTGTGTAA+AGG | - | chr2_4:13019739-13019758 | Msa0316140:intron | 30.0% |
| AGATGAATTCAAACAGCTTA+TGG | + | chr2_4:13019809-13019828 | None:intergenic | 30.0% | |
| !!! | GTAGGGTTTTAGATAAAGAT+GGG | - | chr2_4:13019886-13019905 | Msa0316140:intron | 30.0% |
| !!! | TAGGGTTTTAGATAAAGATG+GGG | - | chr2_4:13019887-13019906 | Msa0316140:intron | 30.0% |
| TATTCGTCATAATTCACAGT+TGG | + | chr2_4:13019927-13019946 | None:intergenic | 30.0% | |
| ! | TTTCTTTTATATGACTGCCA+TGG | - | chr2_4:13019955-13019974 | Msa0316140:intron | 30.0% |
| TGTATCATTCGTATGATAGA+TGG | + | chr2_4:13020041-13020060 | None:intergenic | 30.0% | |
| GGCTAACATATAACCTTATT+TGG | + | chr2_4:13020176-13020195 | None:intergenic | 30.0% | |
| AAAATCACAAAGTGATACAC+AGG | + | chr2_4:13020326-13020345 | None:intergenic | 30.0% | |
| AGTTTGATGTGATGAATTTG+TGG | - | chr2_4:13020355-13020374 | Msa0316140:CDS | 30.0% | |
| GTTTGATGTGATGAATTTGT+GGG | - | chr2_4:13020356-13020375 | Msa0316140:CDS | 30.0% | |
| TCACAGCAAGCAAATATTTA+GGG | + | chr2_4:13020615-13020634 | None:intergenic | 30.0% | |
| TTCACAGCAAGCAAATATTT+AGG | + | chr2_4:13020616-13020635 | None:intergenic | 30.0% | |
| ATGTACTAGTTCACCATATT+GGG | + | chr2_4:13020992-13021011 | None:intergenic | 30.0% | |
| AATATTACCTGTCCGAAAAT+TGG | + | chr2_4:13021050-13021069 | None:intergenic | 30.0% | |
| !! | TGTTTTGAACGGAACTTTAT+TGG | - | chr2_4:13021187-13021206 | Msa0316140:intron | 30.0% |
| !! | GTTTTGAACGGAACTTTATT+GGG | - | chr2_4:13021188-13021207 | Msa0316140:intron | 30.0% |
| ATGTTACTAGCAATCAAATG+GGG | + | chr2_4:13021646-13021665 | None:intergenic | 30.0% | |
| CAATGTTACTAGCAATCAAA+TGG | + | chr2_4:13021648-13021667 | None:intergenic | 30.0% | |
| CATTTGATTGCTAGTAACAT+TGG | - | chr2_4:13021646-13021665 | Msa0316140:CDS | 30.0% | |
| ! | TAACATTGGAGTTTTACCAA+AGG | - | chr2_4:13021660-13021679 | Msa0316140:CDS | 30.0% |
| CATCAGCAAGCAAATTTAAA+GGG | + | chr2_4:13021695-13021714 | None:intergenic | 30.0% | |
| TCATCAGCAAGCAAATTTAA+AGG | + | chr2_4:13021696-13021715 | None:intergenic | 30.0% | |
| ! | GTTTAGATTTTTGACGACAT+TGG | - | chr2_4:13021722-13021741 | Msa0316140:CDS | 30.0% |
| AGAGAGAAAAGTTTGTGTCT+TGG | + | chr2_4:13017090-13017109 | None:intergenic | 35.0% | |
| AGAAAGATATTATACCTCGC+CGG | + | chr2_4:13017416-13017435 | None:intergenic | 35.0% | |
| !!! | TGGTGTAAGTTTTGGTGTTA+AGG | - | chr2_4:13017519-13017538 | Msa0316140:CDS | 35.0% |
| ! | ATTCACTCTGGTGCTAATTT+GGG | + | chr2_4:13017613-13017632 | None:intergenic | 35.0% |
| !!! | GGGGTTTTAATTTTGGTTTG+TGG | - | chr2_4:13017850-13017869 | Msa0316140:intron | 35.0% |
| TGGATAAACTGCTTGGATAA+TGG | - | chr2_4:13017950-13017969 | Msa0316140:intron | 35.0% | |
| ! | GCATATTTGAGGTTATCAAC+TGG | + | chr2_4:13018178-13018197 | None:intergenic | 35.0% |
| ! | TGTTAGGATTGGCATATTTG+AGG | + | chr2_4:13018189-13018208 | None:intergenic | 35.0% |
| CAATCCTAACAGATCCTATT+GGG | - | chr2_4:13018198-13018217 | Msa0316140:intron | 35.0% | |
| TTATCCCAATAGGATCTGTT+AGG | + | chr2_4:13018205-13018224 | None:intergenic | 35.0% | |
| TAACAGATCCTATTGGGATA+AGG | - | chr2_4:13018204-13018223 | Msa0316140:intron | 35.0% | |
| AAGCAAACTAGTCAATCAGA+AGG | - | chr2_4:13018422-13018441 | Msa0316140:intron | 35.0% | |
| ACTAGTCAATCAGAAGGTTA+TGG | - | chr2_4:13018428-13018447 | Msa0316140:intron | 35.0% | |
| CCAACAAAAATGGTATGATC+AGG | + | chr2_4:13018599-13018618 | None:intergenic | 35.0% | |
| !! | CCTGATCATACCATTTTTGT+TGG | - | chr2_4:13018596-13018615 | Msa0316140:intron | 35.0% |
| AGCCAAATCACCAACAAAAA+TGG | + | chr2_4:13018609-13018628 | None:intergenic | 35.0% | |
| !!! | TTTTGTGAGATTTGCTGATG+AGG | - | chr2_4:13018739-13018758 | Msa0316140:intron | 35.0% |
| !! | TTTGTGAGATTTGCTGATGA+GGG | - | chr2_4:13018740-13018759 | Msa0316140:intron | 35.0% |
| ATGTTTGTTCTGCTGCATAA+TGG | - | chr2_4:13018916-13018935 | Msa0316140:intron | 35.0% | |
| CATTCAGCATACACTACAAA+AGG | + | chr2_4:13019023-13019042 | None:intergenic | 35.0% | |
| ACATATAACTGACCTAAGCA+AGG | + | chr2_4:13019275-13019294 | None:intergenic | 35.0% | |
| !! | GTTTGCCCGTTATATTTTTG+CGG | - | chr2_4:13019299-13019318 | Msa0316140:intron | 35.0% |
| CAAGAACTTGAAAATGTAGG+CGG | + | chr2_4:13019336-13019355 | None:intergenic | 35.0% | |
| GGAGTAAATTAAAGGAGCAA+AGG | + | chr2_4:13019442-13019461 | None:intergenic | 35.0% | |
| CAGCTTATGGTATAATGCAT+AGG | + | chr2_4:13019796-13019815 | None:intergenic | 35.0% | |
| TCAGCATGACTGATCTAAAA+GGG | + | chr2_4:13019862-13019881 | None:intergenic | 35.0% | |
| TTCAGCATGACTGATCTAAA+AGG | + | chr2_4:13019863-13019882 | None:intergenic | 35.0% | |
| !!! | CGTAGGGTTTTAGATAAAGA+TGG | - | chr2_4:13019885-13019904 | Msa0316140:intron | 35.0% |
| !!! | AGGGTTTTAGATAAAGATGG+GGG | - | chr2_4:13019888-13019907 | Msa0316140:intron | 35.0% |
| ! | ACTGCCATGGTTTTCAAATT+GGG | - | chr2_4:13019968-13019987 | Msa0316140:intron | 35.0% |
| GATTCCCAATTTGAAAACCA+TGG | + | chr2_4:13019975-13019994 | None:intergenic | 35.0% | |
| CAAGTACCTCACATTGTATT+GGG | + | chr2_4:13020118-13020137 | None:intergenic | 35.0% | |
| ACAAGTACCTCACATTGTAT+TGG | + | chr2_4:13020119-13020138 | None:intergenic | 35.0% | |
| TGTTACAATTTGCAGAAGAC+AGG | + | chr2_4:13020391-13020410 | None:intergenic | 35.0% | |
| ! | TGACTTACATTTTCTTGCAC+CGG | + | chr2_4:13020563-13020582 | None:intergenic | 35.0% |
| ! | GTAGATTTTTGTTGGCAACT+TGG | - | chr2_4:13020927-13020946 | Msa0316140:intron | 35.0% |
| CATGTACTAGTTCACCATAT+TGG | + | chr2_4:13020993-13021012 | None:intergenic | 35.0% | |
| TCCTGATGCAAGAAAAATGA+AGG | + | chr2_4:13021145-13021164 | None:intergenic | 35.0% | |
| ACAAAATGTTCGCCTTTCAT+GGG | - | chr2_4:13021214-13021233 | Msa0316140:intron | 35.0% | |
| TTAACCTACCCTTGTAATTC+TGG | - | chr2_4:13021268-13021287 | Msa0316140:intron | 35.0% | |
| TAACCTACCCTTGTAATTCT+GGG | - | chr2_4:13021269-13021288 | Msa0316140:intron | 35.0% | |
| GCACGGTCATTAAAAAGATT+TGG | + | chr2_4:13021319-13021338 | None:intergenic | 35.0% | |
| ATAATTCTCATAACCACCCT+GGG | + | chr2_4:13021412-13021431 | None:intergenic | 35.0% | |
| GGATAACTTCCATACACATT+GGG | + | chr2_4:13021465-13021484 | None:intergenic | 35.0% | |
| CAATGTGTATGGAAGTTATC+CGG | - | chr2_4:13021464-13021483 | Msa0316140:intron | 35.0% | |
| AATGTGTATGGAAGTTATCC+GGG | - | chr2_4:13021465-13021484 | Msa0316140:intron | 35.0% | |
| TCAAAACAGTACTGTCACAA+AGG | + | chr2_4:13021570-13021589 | None:intergenic | 35.0% | |
| !! | TTGTGACAGTACTGTTTTGA+TGG | - | chr2_4:13021570-13021589 | Msa0316140:CDS | 35.0% |
| AAGAATCCTTATTCCACGAA+GGG | + | chr2_4:13021606-13021625 | None:intergenic | 35.0% | |
| TAAGAATCCTTATTCCACGA+AGG | + | chr2_4:13021607-13021626 | None:intergenic | 35.0% | |
| ! | GATTCACTCTGGTGCTAATT+TGG | + | chr2_4:13017614-13017633 | None:intergenic | 40.0% |
| ACCTGAGACCTTGAGAAATT+AGG | - | chr2_4:13017636-13017655 | Msa0316140:intron | 40.0% | |
| CCTGAGACCTTGAGAAATTA+GGG | - | chr2_4:13017637-13017656 | Msa0316140:intron | 40.0% | |
| TCTGTTTACCAATCGCACTT+AGG | - | chr2_4:13017882-13017901 | Msa0316140:intron | 40.0% | |
| CTGTTTACCAATCGCACTTA+GGG | - | chr2_4:13017883-13017902 | Msa0316140:intron | 40.0% | |
| CCAATAGGATCTGTTAGGAT+TGG | + | chr2_4:13018200-13018219 | None:intergenic | 40.0% | |
| CCAATCCTAACAGATCCTAT+TGG | - | chr2_4:13018197-13018216 | Msa0316140:intron | 40.0% | |
| GATCCTATTGGGATAAGGTT+TGG | - | chr2_4:13018209-13018228 | Msa0316140:intron | 40.0% | |
| CAACCAAACCTTATCCCAAT+AGG | + | chr2_4:13018215-13018234 | None:intergenic | 40.0% | |
| ! | AGAGTGCTTCTGACATACAA+TGG | - | chr2_4:13018485-13018504 | Msa0316140:intron | 40.0% |
| AATGGAACCATTATGCCGAA+TGG | - | chr2_4:13018503-13018522 | Msa0316140:intron | 40.0% | |
| CTGTAATTCTGACCACCATT+CGG | + | chr2_4:13018521-13018540 | None:intergenic | 40.0% | |
| !!! | TTTTGTTGGTGATTTGGCTG+CGG | - | chr2_4:13018610-13018629 | Msa0316140:intron | 40.0% |
| ! | TGTTACTGATTACCTTCTCC+AGG | - | chr2_4:13018634-13018653 | Msa0316140:intron | 40.0% |
| GCTCGTTATAACTCTGTGAA+GGG | - | chr2_4:13018668-13018687 | Msa0316140:intron | 40.0% | |
| CTCGTTATAACTCTGTGAAG+GGG | - | chr2_4:13018669-13018688 | Msa0316140:intron | 40.0% | |
| TCGTTATAACTCTGTGAAGG+GGG | - | chr2_4:13018670-13018689 | Msa0316140:intron | 40.0% | |
| GTTGTGATTGATAGGCTTAC+TGG | - | chr2_4:13018698-13018717 | Msa0316140:intron | 40.0% | |
| TGATTGATAGGCTTACTGGT+AGG | - | chr2_4:13018702-13018721 | Msa0316140:intron | 40.0% | |
| TTTGTTCAACAAGACCCATG+AGG | - | chr2_4:13018801-13018820 | Msa0316140:intron | 40.0% | |
| ACCTGCCACTAATAAAAACC+CGG | - | chr2_4:13018829-13018848 | Msa0316140:intron | 40.0% | |
| TTTCAGCTGAAATCAGTTCC+AGG | + | chr2_4:13019230-13019249 | None:intergenic | 40.0% | |
| ! | GGAACTGATTTCAGCTGAAA+TGG | - | chr2_4:13019230-13019249 | Msa0316140:intron | 40.0% |
| AGCAAGGACATGCACTAAAA+TGG | + | chr2_4:13019259-13019278 | None:intergenic | 40.0% | |
| TTTAGTGCATGTCCTTGCTT+AGG | - | chr2_4:13019260-13019279 | Msa0316140:intron | 40.0% | |
| !! | GTTCTTGTCATTTCGCCTTT+TGG | - | chr2_4:13019349-13019368 | Msa0316140:intron | 40.0% |
| TAAGATCTGCTTTGGCACAA+GGG | + | chr2_4:13019513-13019532 | None:intergenic | 40.0% | |
| ATAAGATCTGCTTTGGCACA+AGG | + | chr2_4:13019514-13019533 | None:intergenic | 40.0% | |
| GGGAAAAAGTGAGCAATTGA+TGG | + | chr2_4:13019842-13019861 | None:intergenic | 40.0% | |
| ! | GACTGCCATGGTTTTCAAAT+TGG | - | chr2_4:13019967-13019986 | Msa0316140:intron | 40.0% |
| !! | ATCTGATTGAGTTGAGCAGT+TGG | + | chr2_4:13020091-13020110 | None:intergenic | 40.0% |
| ATACCTCCCAATACAATGTG+AGG | - | chr2_4:13020109-13020128 | Msa0316140:CDS | 40.0% | |
| TGACTCAGAAGCAACAGAAT+GGG | + | chr2_4:13020589-13020608 | None:intergenic | 40.0% | |
| ! | CTTGCTGTGAATTATGCCAA+CGG | - | chr2_4:13020625-13020644 | Msa0316140:intron | 40.0% |
| TTGCTGTGAATTATGCCAAC+GGG | - | chr2_4:13020626-13020645 | Msa0316140:intron | 40.0% | |
| ! | GTACGCACAGTTGTGTTATT+GGG | + | chr2_4:13020846-13020865 | None:intergenic | 40.0% |
| AGTACGCACAGTTGTGTTAT+TGG | + | chr2_4:13020847-13020866 | None:intergenic | 40.0% | |
| ! | AGGCAAGTTTTCACCCAATA+TGG | - | chr2_4:13020976-13020995 | Msa0316140:intron | 40.0% |
| GTACATGTGAAGATTCCATC+AGG | - | chr2_4:13021006-13021025 | Msa0316140:intron | 40.0% | |
| ! | ATGCGGGTTTGTCCAATTTT+CGG | - | chr2_4:13021035-13021054 | Msa0316140:intron | 40.0% |
| !! | GCCTTCATTTTTCTTGCATC+AGG | - | chr2_4:13021141-13021160 | Msa0316140:intron | 40.0% |
| !! | GAGGCAATACGTGTTTTGAA+CGG | - | chr2_4:13021176-13021195 | Msa0316140:intron | 40.0% |
| TTGAACGGAACTTTATTGGG+TGG | - | chr2_4:13021191-13021210 | Msa0316140:intron | 40.0% | |
| GACAAAATGTTCGCCTTTCA+TGG | - | chr2_4:13021213-13021232 | Msa0316140:intron | 40.0% | |
| CAAAATGTTCGCCTTTCATG+GGG | - | chr2_4:13021215-13021234 | Msa0316140:intron | 40.0% | |
| AAACCAGCCCAGAATTACAA+GGG | + | chr2_4:13021279-13021298 | None:intergenic | 40.0% | |
| TGAGTCTGAGAACAAAAGCA+CGG | + | chr2_4:13021336-13021355 | None:intergenic | 40.0% | |
| CATAATTCTCATAACCACCC+TGG | + | chr2_4:13021413-13021432 | None:intergenic | 40.0% | |
| CAGGGTGGTTATGAGAATTA+TGG | - | chr2_4:13021411-13021430 | Msa0316140:intron | 40.0% | |
| CGGATAACTTCCATACACAT+TGG | + | chr2_4:13021466-13021485 | None:intergenic | 40.0% | |
| ATGTGTATGGAAGTTATCCG+GGG | - | chr2_4:13021466-13021485 | Msa0316140:intron | 40.0% | |
| TAGCAATCAAATGGGGAAGA+GGG | + | chr2_4:13021639-13021658 | None:intergenic | 40.0% | |
| TAAAGGGATACAAGAGCCTT+TGG | + | chr2_4:13021679-13021698 | None:intergenic | 40.0% | |
| TGTGGTGGCATCATAACGTA+CGG | + | chr2_4:13017253-13017272 | None:intergenic | 45.0% | |
| AATCACCGATCCAGAGAGTA+CGG | + | chr2_4:13017345-13017364 | None:intergenic | 45.0% | |
| TATACCTGCTTCGGTAACAC+CGG | - | chr2_4:13017394-13017413 | Msa0316140:CDS | 45.0% | |
| ! | ACTCTGGTGCTAATTTGGGT+GGG | + | chr2_4:13017609-13017628 | None:intergenic | 45.0% |
| CCCTAATTTCTCAAGGTCTC+AGG | + | chr2_4:13017640-13017659 | None:intergenic | 45.0% | |
| GCAGTTTATAGCACACGCAA+TGG | - | chr2_4:13017930-13017949 | Msa0316140:intron | 45.0% | |
| CACGCAATGGATAAACTGCT+TGG | - | chr2_4:13017943-13017962 | Msa0316140:intron | 45.0% | |
| AATTGGGCAACTTTCAGTGC+TGG | - | chr2_4:13018545-13018564 | Msa0316140:intron | 45.0% | |
| ! | ACCTTCTCCAGGAGACTTTT+AGG | - | chr2_4:13018645-13018664 | Msa0316140:intron | 45.0% |
| ! | CCTTCTCCAGGAGACTTTTA+GGG | - | chr2_4:13018646-13018665 | Msa0316140:intron | 45.0% |
| GGCTCGTTATAACTCTGTGA+AGG | - | chr2_4:13018667-13018686 | Msa0316140:intron | 45.0% | |
| GGGCGAAAGTTGTGATTGAT+AGG | - | chr2_4:13018690-13018709 | Msa0316140:intron | 45.0% | |
| TAGGCTTACTGGTAGGTCTA+AGG | - | chr2_4:13018709-13018728 | Msa0316140:intron | 45.0% | |
| AGGCTTACTGGTAGGTCTAA+GGG | - | chr2_4:13018710-13018729 | Msa0316140:intron | 45.0% | |
| ACTGGTAGGTCTAAGGGATA+TGG | - | chr2_4:13018716-13018735 | Msa0316140:intron | 45.0% | |
| TGATGAGGGTGAACAGATGA+GGG | - | chr2_4:13018754-13018773 | Msa0316140:intron | 45.0% | |
| TCAACAAGACCCATGAGGAT+TGG | - | chr2_4:13018806-13018825 | Msa0316140:intron | 45.0% | |
| TGGACGGAAAATCTTCACGA+GGG | + | chr2_4:13019077-13019096 | None:intergenic | 45.0% | |
| ATTGCAGGAAGAAACGACTG+TGG | + | chr2_4:13019097-13019116 | None:intergenic | 45.0% | |
| AACTCCTGTTGTCTCAAAGC+AGG | - | chr2_4:13019177-13019196 | Msa0316140:intron | 45.0% | |
| ACTCCTGTTGTCTCAAAGCA+GGG | - | chr2_4:13019178-13019197 | Msa0316140:intron | 45.0% | |
| GGAGCAAAGGCTATGAATGA+TGG | + | chr2_4:13019429-13019448 | None:intergenic | 45.0% | |
| ATCAGTCATGCTGAAGTCGT+AGG | - | chr2_4:13019868-13019887 | Msa0316140:intron | 45.0% | |
| TCAGTCATGCTGAAGTCGTA+GGG | - | chr2_4:13019869-13019888 | Msa0316140:intron | 45.0% | |
| GTACCTCACATTGTATTGGG+AGG | + | chr2_4:13020115-13020134 | None:intergenic | 45.0% | |
| TAACCAACTGATGTGCTGCA+TGG | - | chr2_4:13020198-13020217 | Msa0316140:CDS | 45.0% | |
| CTGACTCAGAAGCAACAGAA+TGG | + | chr2_4:13020590-13020609 | None:intergenic | 45.0% | |
| TGCTGTGAATTATGCCAACG+GGG | - | chr2_4:13020627-13020646 | Msa0316140:intron | 45.0% | |
| AGATGATCGTCGGTGACATT+TGG | + | chr2_4:13020955-13020974 | None:intergenic | 45.0% | |
| AACTTGCCTCAGATGATCGT+CGG | + | chr2_4:13020965-13020984 | None:intergenic | 45.0% | |
| ! | GGTTTGTCCAATTTTCGGAC+AGG | - | chr2_4:13021040-13021059 | Msa0316140:intron | 45.0% |
| ACGCACTCCTTCAAACAAAC+AGG | - | chr2_4:13021238-13021257 | Msa0316140:intron | 45.0% | |
| CAAACCAGCCCAGAATTACA+AGG | + | chr2_4:13021280-13021299 | None:intergenic | 45.0% | |
| ACTCAACAAGATCCAACCCA+GGG | - | chr2_4:13021351-13021370 | Msa0316140:intron | 45.0% | |
| !! | TTTGCTGTTGTTGCTGCTGT+GGG | + | chr2_4:13021509-13021528 | None:intergenic | 45.0% |
| !! | ATTTGCTGTTGTTGCTGCTG+TGG | + | chr2_4:13021510-13021529 | None:intergenic | 45.0% |
| ACAGCAGCAACAACAGCAAA+TGG | - | chr2_4:13021509-13021528 | Msa0316140:intron | 45.0% | |
| CAGCAGCAACAACAGCAAAT+GGG | - | chr2_4:13021510-13021529 | Msa0316140:CDS | 45.0% | |
| ! | GCTTTTCCCTTCGTGGAATA+AGG | - | chr2_4:13021597-13021616 | Msa0316140:CDS | 45.0% |
| AGCAATCAAATGGGGAAGAG+GGG | + | chr2_4:13021638-13021657 | None:intergenic | 45.0% | |
| CTAGCAATCAAATGGGGAAG+AGG | + | chr2_4:13021640-13021659 | None:intergenic | 45.0% | |
| CCTGGTTGCATCATCTCTCT+CGG | + | chr2_4:13017160-13017179 | None:intergenic | 50.0% | |
| GAGATGATGCAACCAGGACA+CGG | - | chr2_4:13017163-13017182 | Msa0316140:three_prime_UTR | 50.0% | |
| GGTATTGTTGCGGTGGTTGT+TGG | + | chr2_4:13017210-13017229 | None:intergenic | 50.0% | |
| GGTGGCTGTTGGTATTGTTG+CGG | + | chr2_4:13017220-13017239 | None:intergenic | 50.0% | |
| ATCATAACGTACGGCTGCTG+TGG | + | chr2_4:13017244-13017263 | None:intergenic | 50.0% | |
| ACAACAACCGCCAGCTATGT+GGG | - | chr2_4:13017270-13017289 | Msa0316140:three_prime_UTR | 50.0% | |
| ! | GGATCGGTGATTTGCAGTAC+TGG | - | chr2_4:13017353-13017372 | Msa0316140:three_prime_UTR | 50.0% |
| ! | CGGTGATTTGCAGTACTGGA+TGG | - | chr2_4:13017357-13017376 | Msa0316140:three_prime_UTR | 50.0% |
| ! | CACTCTGGTGCTAATTTGGG+TGG | + | chr2_4:13017610-13017629 | None:intergenic | 50.0% |
| GTCTCAGGTTCGATTCACTC+TGG | + | chr2_4:13017625-13017644 | None:intergenic | 50.0% | |
| AAACAGGCCCTAAGTGCGAT+TGG | + | chr2_4:13017893-13017912 | None:intergenic | 50.0% | |
| AATCGCACTTAGGGCCTGTT+TGG | - | chr2_4:13017892-13017911 | Msa0316140:intron | 50.0% | |
| GGAACCATTATGCCGAATGG+TGG | - | chr2_4:13018506-13018525 | Msa0316140:intron | 50.0% | |
| CTGACCACCATTCGGCATAA+TGG | + | chr2_4:13018513-13018532 | None:intergenic | 50.0% | |
| !! | CAACTTTCAGTGCTGGTGAG+AGG | - | chr2_4:13018552-13018571 | Msa0316140:intron | 50.0% |
| CCCTAAAAGTCTCCTGGAGA+AGG | + | chr2_4:13018649-13018668 | None:intergenic | 50.0% | |
| AACGAGCCCTAAAAGTCTCC+TGG | + | chr2_4:13018655-13018674 | None:intergenic | 50.0% | |
| CTGATGAGGGTGAACAGATG+AGG | - | chr2_4:13018753-13018772 | Msa0316140:intron | 50.0% | |
| AGGGCTATGACTGAGATGCA+AGG | - | chr2_4:13018773-13018792 | Msa0316140:intron | 50.0% | |
| GGGCTATGACTGAGATGCAA+GGG | - | chr2_4:13018774-13018793 | Msa0316140:intron | 50.0% | |
| GGCTATGACTGAGATGCAAG+GGG | - | chr2_4:13018775-13018794 | Msa0316140:intron | 50.0% | |
| ! | GCCGGGTTTTTATTAGTGGC+AGG | + | chr2_4:13018833-13018852 | None:intergenic | 50.0% |
| ! | GGCAGCCGGGTTTTTATTAG+TGG | + | chr2_4:13018837-13018856 | None:intergenic | 50.0% |
| AGACAAACCTTTCGGCTGAG+TGG | + | chr2_4:13018861-13018880 | None:intergenic | 50.0% | |
| GTGGACGGAAAATCTTCACG+AGG | + | chr2_4:13019078-13019097 | None:intergenic | 50.0% | |
| CAGGAAGAAACGACTGTGGA+CGG | + | chr2_4:13019093-13019112 | None:intergenic | 50.0% | |
| !! | ACACCCTGCTTTGAGACAAC+AGG | + | chr2_4:13019184-13019203 | None:intergenic | 50.0% |
| ! | TCTCAAAGCAGGGTGTCAAG+AGG | - | chr2_4:13019188-13019207 | Msa0316140:intron | 50.0% |
| GTCAAGAGGCTCTGTCATCT+CGG | - | chr2_4:13019202-13019221 | Msa0316140:intron | 50.0% | |
| GCAGCACATCAGTTGGTTAC+TGG | + | chr2_4:13020197-13020216 | None:intergenic | 50.0% | |
| GATCCATGCAGCACATCAGT+TGG | + | chr2_4:13020204-13020223 | None:intergenic | 50.0% | |
| TTGACCCATGATTGACTGCG+TGG | - | chr2_4:13020298-13020317 | Msa0316140:CDS | 50.0% | |
| ACAGTACAACAAGTCCCCGT+TGG | + | chr2_4:13020644-13020663 | None:intergenic | 50.0% | |
| GCAGCTTCGTATAACCCTAG+TGG | - | chr2_4:13020801-13020820 | Msa0316140:intron | 50.0% | |
| GCTTCGTATAACCCTAGTGG+CGG | - | chr2_4:13020804-13020823 | Msa0316140:intron | 50.0% | |
| ATGTCACCGACGATCATCTG+AGG | - | chr2_4:13020956-13020975 | Msa0316140:intron | 50.0% | |
| ATTCCATCAGGCAAGCGATG+CGG | - | chr2_4:13021018-13021037 | Msa0316140:intron | 50.0% | |
| CAGCCCAGAATTACAAGGGT+AGG | + | chr2_4:13021275-13021294 | None:intergenic | 50.0% | |
| CTACCCTTGTAATTCTGGGC+TGG | - | chr2_4:13021273-13021292 | Msa0316140:intron | 50.0% | |
| GACTCAACAAGATCCAACCC+AGG | - | chr2_4:13021350-13021369 | Msa0316140:intron | 50.0% | |
| CGTAATATCCACCAGCAGCA+GGG | + | chr2_4:13021383-13021402 | None:intergenic | 50.0% | |
| ! | CCTGCTGCTGGTGGATATTA+CGG | - | chr2_4:13021381-13021400 | Msa0316140:intron | 50.0% |
| TGGATATTACGGCTATGCCC+AGG | - | chr2_4:13021392-13021411 | Msa0316140:intron | 50.0% | |
| GGATATTACGGCTATGCCCA+GGG | - | chr2_4:13021393-13021412 | Msa0316140:intron | 50.0% | |
| GGACAGGATCCCAATGTGTA+TGG | - | chr2_4:13021453-13021472 | Msa0316140:intron | 50.0% | |
| !! | TGTTGGTAACCAGGATACCC+CGG | + | chr2_4:13021486-13021505 | None:intergenic | 50.0% |
| !!! | TGGAGTTGCTTTTCCCTTCG+TGG | - | chr2_4:13021590-13021609 | Msa0316140:CDS | 50.0% |
| AAATGGGGAAGAGGGGGAAA+AGG | + | chr2_4:13021631-13021650 | None:intergenic | 50.0% | |
| GCAATCAAATGGGGAAGAGG+GGG | + | chr2_4:13021637-13021656 | None:intergenic | 50.0% | |
| CCGAGAGAGATGATGCAACC+AGG | - | chr2_4:13017157-13017176 | Msa0316140:three_prime_UTR | 55.0% | |
| GGCTGTTGGTATTGTTGCGG+TGG | + | chr2_4:13017217-13017236 | None:intergenic | 55.0% | |
| ATAACGTACGGCTGCTGTGG+TGG | + | chr2_4:13017241-13017260 | None:intergenic | 55.0% | |
| ATAGCTGGCGGTTGTTGTGG+TGG | + | chr2_4:13017268-13017287 | None:intergenic | 55.0% | |
| CACATAGCTGGCGGTTGTTG+TGG | + | chr2_4:13017271-13017290 | None:intergenic | 55.0% | |
| CACAACAACCGCCAGCTATG+TGG | - | chr2_4:13017269-13017288 | Msa0316140:three_prime_UTR | 55.0% | |
| CTGATGAGGTCCGTACTCTC+TGG | - | chr2_4:13017332-13017351 | Msa0316140:three_prime_UTR | 55.0% | |
| GAGGTCCGTACTCTCTGGAT+CGG | - | chr2_4:13017337-13017356 | Msa0316140:three_prime_UTR | 55.0% | |
| GTGGCAGGTCCAATCCTCAT+GGG | + | chr2_4:13018818-13018837 | None:intergenic | 55.0% | |
| AGTGGCAGGTCCAATCCTCA+TGG | + | chr2_4:13018819-13018838 | None:intergenic | 55.0% | |
| CAAACCTTTCGGCTGAGTGG+TGG | + | chr2_4:13018858-13018877 | None:intergenic | 55.0% | |
| GGCTCCACGCAGTCAATCAT+GGG | + | chr2_4:13020305-13020324 | None:intergenic | 55.0% | |
| AGGCTCCACGCAGTCAATCA+TGG | + | chr2_4:13020306-13020325 | None:intergenic | 55.0% | |
| TCTCGCTTTGTCCGCCACTA+GGG | + | chr2_4:13020818-13020837 | None:intergenic | 55.0% | |
| TTCTCGCTTTGTCCGCCACT+AGG | + | chr2_4:13020819-13020838 | None:intergenic | 55.0% | |
| TTCCATCAGGCAAGCGATGC+GGG | - | chr2_4:13021019-13021038 | Msa0316140:intron | 55.0% | |
| CATCAGGAGCTGTGCAGAAG+AGG | - | chr2_4:13021157-13021176 | Msa0316140:intron | 55.0% | |
| ! | AAGGAGTGCGTCCCCATGAA+AGG | + | chr2_4:13021229-13021248 | None:intergenic | 55.0% |
| CAACAAGATCCAACCCAGGG+TGG | - | chr2_4:13021354-13021373 | Msa0316140:intron | 55.0% | |
| CCGTAATATCCACCAGCAGC+AGG | + | chr2_4:13021384-13021403 | None:intergenic | 55.0% | |
| TATTACGGCTATGCCCAGGG+TGG | - | chr2_4:13021396-13021415 | Msa0316140:intron | 55.0% | |
| ACATTGGGATCCTGTCCAGC+AGG | + | chr2_4:13021450-13021469 | None:intergenic | 55.0% | |
| ! | GGAAGTTATCCGGGGTATCC+TGG | - | chr2_4:13021474-13021493 | Msa0316140:intron | 55.0% |
| !! | TGCTGTGGGTGTTGGTAACC+AGG | + | chr2_4:13021495-13021514 | None:intergenic | 55.0% |
| GTTGTTGCTGCTGTGGGTGT+TGG | + | chr2_4:13021503-13021522 | None:intergenic | 55.0% | |
| GATGCAACCAGGACACGGCA+TGG | - | chr2_4:13017168-13017187 | Msa0316140:three_prime_UTR | 60.0% | |
| GGTGGTTGTTGGCCCATGGT+GGG | + | chr2_4:13017199-13017218 | None:intergenic | 60.0% | |
| TTGCGGTGGTTGTTGGCCCA+TGG | + | chr2_4:13017203-13017222 | None:intergenic | 60.0% | |
| ACAACCGCCAGCTATGTGGG+CGG | - | chr2_4:13017273-13017292 | Msa0316140:three_prime_UTR | 60.0% | |
| ! | CTGAGGAGGCTGAGCGGATT+GGG | + | chr2_4:13017299-13017318 | None:intergenic | 60.0% |
| AGTACGGACCTCATCAGCGC+TGG | + | chr2_4:13017329-13017348 | None:intergenic | 60.0% | |
| AGGTCGTCGAGGCAGGATGA+TGG | - | chr2_4:13018572-13018591 | Msa0316140:intron | 60.0% | |
| AACCCGCATCGCTTGCCTGA+TGG | + | chr2_4:13021024-13021043 | None:intergenic | 60.0% | |
| AGCAGCAGGGTAACCACCCT+GGG | + | chr2_4:13021370-13021389 | None:intergenic | 60.0% | |
| TTGGGATCCTGTCCAGCAGG+AGG | + | chr2_4:13021447-13021466 | None:intergenic | 60.0% | |
| GGCATGGCTCCTCCCACCAT+GGG | - | chr2_4:13017184-13017203 | Msa0316140:three_prime_UTR | 65.0% | |
| ! | GGTTGTTGGCCCATGGTGGG+AGG | + | chr2_4:13017196-13017215 | None:intergenic | 65.0% |
| CGGTGGTTGTTGGCCCATGG+TGG | + | chr2_4:13017200-13017219 | None:intergenic | 65.0% | |
| !! | GCTGCTGTGGTGGTGGCTGT+TGG | + | chr2_4:13017231-13017250 | None:intergenic | 65.0% |
| ACGTACGGCTGCTGTGGTGG+TGG | + | chr2_4:13017238-13017257 | None:intergenic | 65.0% | |
| GATTGGGCCGCCCACATAGC+TGG | + | chr2_4:13017283-13017302 | None:intergenic | 65.0% | |
| GCTGAGGAGGCTGAGCGGAT+TGG | + | chr2_4:13017300-13017319 | None:intergenic | 65.0% | |
| ! | ACGGACCTCATCAGCGCTGG+CGG | + | chr2_4:13017326-13017345 | None:intergenic | 65.0% |
| !! | CTCGCCGGTGTTACCGAAGC+AGG | + | chr2_4:13017401-13017420 | None:intergenic | 65.0% |
| CTGCTTCGGTAACACCGGCG+AGG | - | chr2_4:13017399-13017418 | Msa0316140:CDS | 65.0% | |
| ! | GTGCTGGTGAGAGGTCGTCG+AGG | - | chr2_4:13018561-13018580 | Msa0316140:intron | 65.0% |
| TGGTGAGAGGTCGTCGAGGC+AGG | - | chr2_4:13018565-13018584 | Msa0316140:intron | 65.0% | |
| TTCGGCTGAGTGGTGGCAGC+CGG | + | chr2_4:13018851-13018870 | None:intergenic | 65.0% | |
| GCTGCCACCACTCAGCCGAA+AGG | - | chr2_4:13018851-13018870 | Msa0316140:intron | 65.0% | |
| GGCTCTGTCATCTCGGAGCC+TGG | - | chr2_4:13019209-13019228 | Msa0316140:intron | 65.0% | |
| GCAGGGTAACCACCCTGGGT+TGG | + | chr2_4:13021366-13021385 | None:intergenic | 65.0% | |
| CAGCAGCAGGGTAACCACCC+TGG | + | chr2_4:13021371-13021390 | None:intergenic | 65.0% | |
| CAGGGTGGTTACCCTGCTGC+TGG | - | chr2_4:13021369-13021388 | Msa0316140:intron | 65.0% | |
| GGTGGTTACCCTGCTGCTGG+TGG | - | chr2_4:13021372-13021391 | Msa0316140:intron | 65.0% | |
| GGTTACGCTGCTCCTCCTGC+TGG | - | chr2_4:13021432-13021451 | Msa0316140:intron | 65.0% | |
| GGAGGAGCCATGCCGTGTCC+TGG | + | chr2_4:13017178-13017197 | None:intergenic | 70.0% | |
| CGGCATGGCTCCTCCCACCA+TGG | - | chr2_4:13017183-13017202 | Msa0316140:three_prime_UTR | 70.0% | |
| TGGGCCGCCCACATAGCTGG+CGG | + | chr2_4:13017280-13017299 | None:intergenic | 70.0% | |
| GGGCTGCTGAGGAGGCTGAG+CGG | + | chr2_4:13017305-13017324 | None:intergenic | 70.0% | |
| !! | CGGACCTCATCAGCGCTGGC+GGG | + | chr2_4:13017325-13017344 | None:intergenic | 70.0% |
| TCGGCTGAGTGGTGGCAGCC+GGG | + | chr2_4:13018850-13018869 | None:intergenic | 70.0% | |
| CGCTGCTCCTCCTGCTGGAC+AGG | - | chr2_4:13021437-13021456 | Msa0316140:intron | 70.0% | |
| !! | TCAGCGCTGGCGGGCTGCTG+AGG | + | chr2_4:13017316-13017335 | None:intergenic | 75.0% |
| !! | GCAGCCCGCCAGCGCTGATG+AGG | - | chr2_4:13017318-13017337 | Msa0316140:three_prime_UTR | 75.0% |
| !!! | GCGCTGGCGGGCTGCTGAGG+AGG | + | chr2_4:13017313-13017332 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 13017056 | 13021874 | 13017056 | ID=Msa0316140;Name=Msa0316140 |
| chr2_4 | mRNA | 13017056 | 13021874 | 13017056 | ID=Msa0316140-mRNA-1;Parent=Msa0316140;Name=Msa0316140-mRNA-1;_AED=0.27;_eAED=0.27;_QI=110|0.5|0.8|1|0.5|0.8|5|332|379 |
| chr2_4 | exon | 13017056 | 13017579 | 13017056 | ID=Msa0316140-mRNA-1:exon:4951;Parent=Msa0316140-mRNA-1 |
| chr2_4 | exon | 13017671 | 13017767 | 13017671 | ID=Msa0316140-mRNA-1:exon:4950;Parent=Msa0316140-mRNA-1 |
| chr2_4 | exon | 13018073 | 13018125 | 13018073 | ID=Msa0316140-mRNA-1:exon:4949;Parent=Msa0316140-mRNA-1 |
| chr2_4 | exon | 13019993 | 13020535 | 13019993 | ID=Msa0316140-mRNA-1:exon:4948;Parent=Msa0316140-mRNA-1 |
| chr2_4 | exon | 13021510 | 13021874 | 13021510 | ID=Msa0316140-mRNA-1:exon:4947;Parent=Msa0316140-mRNA-1 |
| chr2_4 | five_prime_UTR | 13021765 | 13021874 | 13021765 | ID=Msa0316140-mRNA-1:five_prime_utr;Parent=Msa0316140-mRNA-1 |
| chr2_4 | CDS | 13021510 | 13021764 | 13021510 | ID=Msa0316140-mRNA-1:cds;Parent=Msa0316140-mRNA-1 |
| chr2_4 | CDS | 13019993 | 13020535 | 13019993 | ID=Msa0316140-mRNA-1:cds;Parent=Msa0316140-mRNA-1 |
| chr2_4 | CDS | 13018073 | 13018125 | 13018073 | ID=Msa0316140-mRNA-1:cds;Parent=Msa0316140-mRNA-1 |
| chr2_4 | CDS | 13017671 | 13017767 | 13017671 | ID=Msa0316140-mRNA-1:cds;Parent=Msa0316140-mRNA-1 |
| chr2_4 | CDS | 13017388 | 13017579 | 13017388 | ID=Msa0316140-mRNA-1:cds;Parent=Msa0316140-mRNA-1 |
| chr2_4 | three_prime_UTR | 13017056 | 13017387 | 13017056 | ID=Msa0316140-mRNA-1:three_prime_utr;Parent=Msa0316140-mRNA-1 |
| Gene Sequence |
| Protein sequence |
