AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1208530

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1208530 MtrunA17_Chr4g0058021 99.000 600 6 0 1 600 1 600 0.0 1205
Msa1208530 MtrunA17_Chr4g0058021 50.352 284 138 2 122 405 420 700 8.52e-81 269
Msa1208530 MtrunA17_Chr6g0465321 56.000 525 217 5 86 599 22 543 0.0 557
Msa1208530 MtrunA17_Chr6g0465321 46.644 298 142 7 123 409 358 649 7.93e-65 224
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1208530 AT5G63190.2 75.124 603 146 4 1 601 1 601 0.0 899
Msa1208530 AT5G63190.2 49.653 288 142 2 120 407 418 702 5.43e-82 272
Msa1208530 AT5G63190.1 75.124 603 146 4 1 601 1 601 0.0 899
Msa1208530 AT5G63190.1 49.653 288 142 2 120 407 418 702 5.43e-82 272
Msa1208530 AT4G24800.4 75.000 596 146 2 5 600 2 594 0.0 872
Msa1208530 AT4G24800.4 49.291 282 141 2 120 401 412 691 5.75e-81 270
Msa1208530 AT4G24800.1 75.000 596 146 2 5 600 2 594 0.0 872
Msa1208530 AT4G24800.1 49.291 282 141 2 120 401 412 691 5.75e-81 270
Msa1208530 AT4G24800.3 75.000 596 146 2 5 600 2 594 0.0 872
Msa1208530 AT4G24800.3 49.291 282 141 2 120 401 412 691 5.75e-81 270
Msa1208530 AT4G24800.2 75.000 596 146 2 5 600 2 594 0.0 872
Msa1208530 AT4G24800.2 49.291 282 141 2 120 401 412 691 5.75e-81 270
Msa1208530 AT3G48390.1 71.739 506 138 2 96 600 30 531 0.0 738
Msa1208530 AT3G48390.1 49.301 286 142 2 117 402 346 628 7.59e-80 265
Msa1208530 AT3G48390.1 24.161 447 265 10 113 525 211 617 4.72e-21 98.2
Msa1208530 AT1G22730.1 50.462 541 234 8 78 599 51 576 5.71e-171 503
Msa1208530 AT1G22730.1 44.872 312 151 7 103 403 376 677 4.78e-60 213

Find 248 sgRNAs with CRISPR-Local

Find 386 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCCAATCCAGCTGGTGAAAA+TGG 0.176893 8_1:-66662357 Msa1208530:CDS
ACCTCGCCACTATCATAATT+TGG 0.193734 8_1:+66663589 None:intergenic
TCAACAGAGGATATTGTTAA+TGG 0.233545 8_1:-66662096 Msa1208530:CDS
TTCTCTCACACCACCGTTTA+GGG 0.264837 8_1:-66665587 Msa1208530:five_prime_UTR
GTTTCACTACCACTGCATTT+TGG 0.266094 8_1:+66661928 None:intergenic
TTTCTCTCACACCACCGTTT+AGG 0.281492 8_1:-66665588 Msa1208530:five_prime_UTR
TCCTGTCTTGGCTCGAGATC+CGG 0.290952 8_1:-66665502 Msa1208530:five_prime_UTR
GTGCTGGTGGTAAGGGCACT+TGG 0.296945 8_1:-66663660 Msa1208530:CDS
CAGTAATGGGGATGTTGATT+TGG 0.304435 8_1:-66663156 Msa1208530:CDS
CGGTCGCATTCTGGAAAGTT+AGG 0.310044 8_1:-66664927 Msa1208530:CDS
CGTTGTTGCAGTTTCCGATT+TGG 0.319807 8_1:-66665541 Msa1208530:five_prime_UTR
TCAAACTAAACTTGATCTAA+TGG 0.320789 8_1:+66661191 None:intergenic
TAAAGGATTCACCCGGATTA+AGG 0.323279 8_1:-66661597 Msa1208530:three_prime_UTR
TTCCACCAGCCTTTCTTGCC+AGG 0.329884 8_1:-66662863 Msa1208530:CDS
TGACATCCTTGCTTTATTCC+TGG 0.334192 8_1:-66662910 Msa1208530:CDS
ACGTGACGTGTTTGTGTTAT+TGG 0.336667 8_1:-66665140 Msa1208530:five_prime_UTR
CGTGACGTGTTTGTGTTATT+GGG 0.337853 8_1:-66665139 Msa1208530:five_prime_UTR
TAGATGAATACTTCAGTAAT+GGG 0.339593 8_1:-66663169 Msa1208530:CDS
TGCTGGTGGTAAGGGCACTT+GGG 0.342359 8_1:-66663659 Msa1208530:CDS
GAGGTTAATAACACTTGCTT+TGG 0.344003 8_1:-66662184 Msa1208530:CDS
ACAAGTCGCTTAATGAAGTA+TGG 0.352741 8_1:+66663092 None:intergenic
CCATTGAAGATGGGATAATC+TGG 0.355011 8_1:-66661422 Msa1208530:three_prime_UTR
CAGGGCAAGGAAGGCTCTTC+CGG 0.356489 8_1:-66662844 Msa1208530:CDS
CACTGAGGTTCCTGTTACTT+CGG 0.357470 8_1:-66661337 Msa1208530:three_prime_UTR
GCTGGTGGTAAGGGCACTTG+GGG 0.362041 8_1:-66663658 Msa1208530:CDS
CACTTGAGCCAAGTTCTCTT+AGG 0.362449 8_1:+66663123 None:intergenic
TTTACAATGACCGAAGTAAC+AGG 0.366531 8_1:+66661327 None:intergenic
AGATACAACGCTGGATATAC+TGG 0.366558 8_1:-66662046 Msa1208530:CDS
CCATTGAACTTGGATGAAAT+TGG 0.368898 8_1:-66661964 Msa1208530:CDS
CATTAGTCCCACACAGATTA+GGG 0.370644 8_1:-66662994 Msa1208530:CDS
GGGTAGTTTAGCTAGACATC+TGG 0.378154 8_1:+66661461 None:intergenic
ATGAAAATGCAAATCGGAAC+TGG 0.379767 8_1:+66665462 None:intergenic
CTTAAAGAATATGTTGATAG+TGG 0.380631 8_1:-66662678 Msa1208530:CDS
TCATTAGTCCCACACAGATT+AGG 0.381188 8_1:-66662995 Msa1208530:CDS
AGTAGTTCCAACCAGCTCAT+AGG 0.384481 8_1:+66663238 None:intergenic
GAATGTGAGGAAGTACAAAA+AGG 0.386583 8_1:-66662313 Msa1208530:CDS
TCTAGGCTTCGAATGAGTTC+AGG 0.390486 8_1:+66662246 None:intergenic
CCAATCCAGCTGGTGAAAAT+GGG 0.390549 8_1:-66662356 Msa1208530:CDS
GGCTATTGAGATGCTGGGGC+GGG 0.391205 8_1:-66661858 Msa1208530:CDS
CATCAAGACCCTCCTTAATC+CGG 0.394068 8_1:+66661585 None:intergenic
GAGAAAACCCTTTCACCATT+TGG 0.394077 8_1:+66662490 None:intergenic
CCAATTTCATCCAAGTTCAA+TGG 0.400298 8_1:+66661964 None:intergenic
CCTGTCTTGGCTCGAGATCC+GGG 0.403205 8_1:-66665501 Msa1208530:five_prime_UTR
GTGAAAGGCTATTGAGATGC+TGG 0.406948 8_1:-66661864 Msa1208530:CDS
CTTCCTTGCCCTGGCAAGAA+AGG 0.407487 8_1:+66662854 None:intergenic
CATCCTTCAGATATTGCCTT+GGG 0.409887 8_1:+66662396 None:intergenic
GGGAACTGGATGGGCTGTGG+AGG 0.411357 8_1:-66661836 Msa1208530:CDS
CAATTTCATCCAAGTTCAAT+GGG 0.413224 8_1:+66661965 None:intergenic
TCAGCTCCCTTGGAAGATTC+CGG 0.416092 8_1:+66662825 None:intergenic
TCCACTGTCTTCTCCTGTCT+TGG 0.416678 8_1:-66665514 Msa1208530:five_prime_UTR
CTTGCCCTGGCAAGAAAGGC+TGG 0.425041 8_1:+66662858 None:intergenic
AAAGTTAGGGCGGGCTAAGA+AGG 0.432147 8_1:-66664913 Msa1208530:CDS
CCAGATTATCCCATCTTCAA+TGG 0.433032 8_1:+66661422 None:intergenic
TAAGGAGGGTCTTGATGATC+TGG 0.435168 8_1:-66661579 Msa1208530:three_prime_UTR
GGTGGTAAGGCACAGACTGC+TGG 0.438468 8_1:-66664972 Msa1208530:CDS
CAGGTGCTCCAAGATCTTCT+AGG 0.438853 8_1:+66662229 None:intergenic
CTTGACTACCTCAGCTCCCT+TGG 0.439299 8_1:+66662815 None:intergenic
AAACCCTTTCACCATTTGGC+TGG 0.441435 8_1:+66662494 None:intergenic
AGTTTGAAAGATATATCAAT+TGG 0.443081 8_1:-66661175 Msa1208530:three_prime_UTR
TGCAGATGGTGCTGGTGGTA+AGG 0.445986 8_1:-66663668 Msa1208530:intron
CATTTACTCTCTCTGGATGA+AGG 0.447288 8_1:-66661238 Msa1208530:three_prime_UTR
ATGTCAAGTAAAAGAGCAAA+TGG 0.449255 8_1:+66661378 None:intergenic
CCATGGAGAAGAAGAATGAT+AGG 0.451295 8_1:-66661679 Msa1208530:three_prime_UTR
CTCTCTTCTGCTCGTCATGC+AGG 0.451990 8_1:-66661886 Msa1208530:CDS
TTTAACAGCTTCAACAGTAA+AGG 0.452533 8_1:+66662546 None:intergenic
ATTCGAAGCCTAGAAGATCT+TGG 0.457110 8_1:-66662237 Msa1208530:CDS
TACTGAAGTATTCATCTATG+AGG 0.457447 8_1:+66663174 None:intergenic
TGTACTTGCCCCATTGAACT+TGG 0.458146 8_1:-66661974 Msa1208530:CDS
TGTTTGTGTTATTGGGGAAA+TGG 0.461990 8_1:-66665132 Msa1208530:exon
AATGATCCAAATTATGATAG+TGG 0.464061 8_1:-66663595 Msa1208530:CDS
GAACTGGAATCTTCTGTGCT+TGG 0.465184 8_1:+66665478 None:intergenic
AACTACTGTTACTGACCCCT+TGG 0.468009 8_1:-66663222 Msa1208530:CDS
GCTTCCTTTGCCAATCCAGC+TGG 0.468039 8_1:-66662366 Msa1208530:CDS
AGTGAAGAAAGCTTTGGTTA+TGG 0.470878 8_1:-66661702 Msa1208530:three_prime_UTR
CTTTCTTGCCAGGGCAAGGA+AGG 0.472429 8_1:-66662853 Msa1208530:CDS
GAATCTCCATGGCAAGTACC+AGG 0.474177 8_1:+66662580 None:intergenic
TCACATTCTCATCTTCAACT+TGG 0.474950 8_1:+66662328 None:intergenic
CAAAGCTCCTGCTGGTGGTA+AGG 0.478498 8_1:-66664985 Msa1208530:CDS
GGGTCTTGATGATCTGGCTC+TGG 0.479384 8_1:-66661573 Msa1208530:three_prime_UTR
GCTATTGAGATGCTGGGGCG+GGG 0.479576 8_1:-66661857 Msa1208530:CDS
GGCAATGGACAGGCATGATA+AGG 0.480888 8_1:-66663063 Msa1208530:CDS
CCATCACGAGGTTGTGAAGA+AGG 0.481692 8_1:-66662604 Msa1208530:CDS
CCCGGATCTCGAGCCAAGAC+AGG 0.482662 8_1:+66665501 None:intergenic
GCAGATGGTGCTGGTGGTAA+GGG 0.484044 8_1:-66663667 Msa1208530:intron
TGCCAGTGTATTCGTGACTT+GGG 0.484187 8_1:-66661749 Msa1208530:CDS
CGGAAGAGCCTTCCTTGCCC+TGG 0.485045 8_1:+66662845 None:intergenic
TGTTGTCCTCCCATTGAAGA+TGG 0.487299 8_1:-66661432 Msa1208530:three_prime_UTR
TCCACCAGCCTTTCTTGCCA+GGG 0.488180 8_1:-66662862 Msa1208530:CDS
TGCTTTCTTGAATTCATCCA+AGG 0.489968 8_1:+66663205 None:intergenic
TGAGGTAGTGAAGAAAGCTT+TGG 0.490667 8_1:-66661708 Msa1208530:exon
GCGACTTGTTTCCATGGCAA+TGG 0.493441 8_1:-66663078 Msa1208530:CDS
GAATCCTTTAGTCAGCTGAT+TGG 0.493942 8_1:+66661610 None:intergenic
TGATCTTGCAGTGGATATCC+TGG 0.494069 8_1:-66662940 Msa1208530:CDS
GAAAGCTTTGGTTATGGCCA+TGG 0.496815 8_1:-66661696 Msa1208530:three_prime_UTR
GGTCGCATTCTGGAAAGTTA+GGG 0.496864 8_1:-66664926 Msa1208530:CDS
CTGCAGGAGTGCTTCAGTGA+AGG 0.497405 8_1:-66661644 Msa1208530:three_prime_UTR
CCTATCATTCTTCTTCTCCA+TGG 0.499101 8_1:+66661679 None:intergenic
AGTGAAATGAAAATGCAAAT+CGG 0.499101 8_1:+66665456 None:intergenic
ATGCCAGTGTATTCGTGACT+TGG 0.499296 8_1:-66661750 Msa1208530:CDS
GGAATCTTCTGTGCTTGGCC+CGG 0.500460 8_1:+66665483 None:intergenic
GAAGAAGAATGATAGGATGC+TGG 0.500749 8_1:-66661672 Msa1208530:three_prime_UTR
GGTAGTTTAGCTAGACATCT+GGG 0.502037 8_1:+66661462 None:intergenic
GGACAAGATCACAAAGCTCT+TGG 0.504142 8_1:-66661806 Msa1208530:CDS
TTTATAGGAACCCTATGAGC+TGG 0.506672 8_1:-66663249 Msa1208530:intron
AAAGAACAGAGAAAAGGAAA+TGG 0.507361 8_1:-66662157 Msa1208530:CDS
CAGCCTTTCTTGCCAGGGCA+AGG 0.508041 8_1:-66662857 Msa1208530:CDS
GCATCTGACCTAAGAGAACT+TGG 0.508510 8_1:-66663131 Msa1208530:CDS
ATAGATGAATACTTCAGTAA+TGG 0.511492 8_1:-66663170 Msa1208530:CDS
TGTAGGTGTATACGTGAGTT+GGG 0.511836 8_1:-66662639 Msa1208530:CDS
TTGTTTCCATGGCAATGGAC+AGG 0.512207 8_1:-66663073 Msa1208530:CDS
GTAGTTCCAACCAGCTCATA+GGG 0.512875 8_1:+66663239 None:intergenic
CTTGTGGATGCAGATGGTGC+TGG 0.513272 8_1:-66663676 Msa1208530:intron
TCCACAAGTTCTGCATGGTG+TGG 0.514197 8_1:+66662765 None:intergenic
GTTCCAGCCAAATGGTGAAA+GGG 0.516399 8_1:-66662497 Msa1208530:CDS
CAGATTATCCCATCTTCAAT+GGG 0.516688 8_1:+66661423 None:intergenic
ACTGATTAGTTCCAGCCAAA+TGG 0.516854 8_1:-66662505 Msa1208530:CDS
CAACTCACGTATACACCTAC+AGG 0.516859 8_1:+66662641 None:intergenic
AAGAATATCGAAACCCTAAA+CGG 0.517598 8_1:+66665574 None:intergenic
GGCTCTTCCGGAATCTTCCA+AGG 0.517641 8_1:-66662832 Msa1208530:CDS
GCATGATAAGGAGAAAGAAA+TGG 0.518042 8_1:-66663051 Msa1208530:CDS
AACAGTAAAGGTTCTGCTGA+AGG 0.520154 8_1:+66662558 None:intergenic
TCTCTGGATGAAGGGTCTGT+TGG 0.520349 8_1:-66661229 Msa1208530:three_prime_UTR
AATGGGAGGACAACATGCCC+TGG 0.520676 8_1:+66661440 None:intergenic
CTATATGAAGTGCAGATAGC+AGG 0.521385 8_1:+66662127 None:intergenic
CCATCCTTCAGATATTGCCT+TGG 0.522923 8_1:+66662395 None:intergenic
AGCTGAGAGATAGCTCTTCT+CGG 0.523111 8_1:+66662788 None:intergenic
TATCAAGAGCAAGATCATCT+AGG 0.523207 8_1:+66662454 None:intergenic
GGACCGAAAGAACAGAGAAA+AGG 0.523465 8_1:-66662163 Msa1208530:CDS
CTATTGAGATGCTGGGGCGG+GGG 0.523618 8_1:-66661856 Msa1208530:CDS
AGCAATGTCGACGGCGACTT+AGG 0.524812 8_1:+66665026 None:intergenic
CTGTAGGTGTATACGTGAGT+TGG 0.525164 8_1:-66662640 Msa1208530:CDS
CTCTTGGAGGAGTATGAAAG+TGG 0.525404 8_1:-66661790 Msa1208530:CDS
CATCACATCAAAGCTCCTGC+TGG 0.525516 8_1:-66664993 Msa1208530:CDS
TAGCTAGACATCTGGGGCAG+AGG 0.526140 8_1:+66661469 None:intergenic
CATTAAGCGACTTGTTTCCA+TGG 0.528753 8_1:-66663084 Msa1208530:CDS
CATTGAAGATGGGATAATCT+GGG 0.529614 8_1:-66661421 Msa1208530:three_prime_UTR
TGAAACAAGGCTTTAGCTGA+TGG 0.533442 8_1:+66662429 None:intergenic
TGAAAGGCTATTGAGATGCT+GGG 0.533761 8_1:-66661863 Msa1208530:CDS
GTGGTAAGGCACAGACTGCT+GGG 0.533927 8_1:-66664971 Msa1208530:CDS
GAAGGCCCTGGTACTTGCCA+TGG 0.534434 8_1:-66662586 Msa1208530:CDS
CAAGATCACAAAGCTCTTGG+AGG 0.537964 8_1:-66661803 Msa1208530:CDS
CAAGGATGTCAACTGCATCC+AGG 0.537979 8_1:+66662922 None:intergenic
GTTTCAGTCATTTGTCCCCA+AGG 0.538145 8_1:-66662412 Msa1208530:CDS
GCTTTCTTGAATTCATCCAA+GGG 0.546570 8_1:+66663206 None:intergenic
TCACATTAAGCATGCATAGG+TGG 0.548352 8_1:+66661095 None:intergenic
ATCAAGACCCTCCTTAATCC+GGG 0.549632 8_1:+66661586 None:intergenic
TCCTTTAGTCAGCTGATTGG+TGG 0.549699 8_1:+66661613 None:intergenic
TTAAAAGAAGCAGCAGCAGA+AGG 0.550137 8_1:-66662528 Msa1208530:CDS
AGTTCCAGCCAAATGGTGAA+AGG 0.550968 8_1:-66662498 Msa1208530:CDS
AGGCTATTGAGATGCTGGGG+CGG 0.551446 8_1:-66661859 Msa1208530:CDS
ATTTACTCTCTCTGGATGAA+GGG 0.553536 8_1:-66661237 Msa1208530:three_prime_UTR
CGCATTCTGGAAAGTTAGGG+CGG 0.554864 8_1:-66664923 Msa1208530:CDS
TTCACCAGCTGGATTGGCAA+AGG 0.554928 8_1:+66662362 None:intergenic
GGGGAAATGGCGTCGAACGA+GGG 0.561534 8_1:-66665119 Msa1208530:exon
CACATTAAGCATGCATAGGT+GGG 0.561667 8_1:+66661096 None:intergenic
ACCACCAATCAGCTGACTAA+AGG 0.562228 8_1:-66661614 Msa1208530:three_prime_UTR
ATGGGCTGTGGAGGATGCTA+AGG 0.562248 8_1:-66661827 Msa1208530:CDS
GTCTGTGCCTTACCACCAGC+AGG 0.563393 8_1:+66664978 None:intergenic
ACTACCTCATGGTTGAAGAA+AGG 0.564053 8_1:+66661722 None:intergenic
AAGTTAGGGCGGGCTAAGAA+GGG 0.565574 8_1:-66664912 Msa1208530:intron
CAGGATAATGTTGCATCAAG+AGG 0.565584 8_1:-66661275 Msa1208530:three_prime_UTR
CCTTCTTCACAACCTCGTGA+TGG 0.565630 8_1:+66662604 None:intergenic
CTGGTGGTAAGGGCACTTGG+GGG 0.567812 8_1:-66663657 Msa1208530:CDS
AAACGGTGGTGTGAGAGAAA+CGG 0.568099 8_1:+66665591 None:intergenic
AAGCTTTCTTCACTACCTCA+TGG 0.568149 8_1:+66661711 None:intergenic
TGATGGTAGAAGCCACCCCT+TGG 0.570649 8_1:+66661499 None:intergenic
TAGGAACCCTATGAGCTGGT+TGG 0.572366 8_1:-66663245 Msa1208530:CDS
CATCAACAACAGCACGTGCC+AGG 0.573372 8_1:+66662892 None:intergenic
CTGCTCGTCATGCAGGTGAA+AGG 0.573520 8_1:-66661879 Msa1208530:CDS
TGGGGAAATGGCGTCGAACG+AGG 0.577450 8_1:-66665120 Msa1208530:exon
GTCTTTCCACAAGTTCTGCA+TGG 0.577504 8_1:+66662760 None:intergenic
CCTATGCATGCTTAATGTGA+TGG 0.577811 8_1:-66661092 Msa1208530:three_prime_UTR
GTGGAGCATGCACAGACCAA+GGG 0.578585 8_1:-66661515 Msa1208530:three_prime_UTR
AATCCATCCCTAATCTGTGT+GGG 0.579210 8_1:+66662987 None:intergenic
TGGTAGTGAAACTGTGCGTA+TGG 0.580211 8_1:-66661917 Msa1208530:CDS
CGAGGTTGTGAAGAAGGCCC+TGG 0.585050 8_1:-66662598 Msa1208530:CDS
GAAAATTGGAGACCGAAACC+AGG 0.585352 8_1:+66661136 None:intergenic
ATCATGCCTGTCCATTGCCA+TGG 0.586529 8_1:+66663067 None:intergenic
AGTCCCACACAGATTAGGGA+TGG 0.587668 8_1:-66662990 Msa1208530:CDS
GTCCCCAAGGCAATATCTGA+AGG 0.590596 8_1:-66662399 Msa1208530:CDS
TCCACACCATGCAGAACTTG+TGG 0.592118 8_1:-66662766 Msa1208530:CDS
GTTGTCCTCCCATTGAAGAT+GGG 0.597276 8_1:-66661431 Msa1208530:three_prime_UTR
ACTGAAGTATTCATCTATGA+GGG 0.597331 8_1:+66663175 None:intergenic
TAGGATGCTGGATTTGCTGC+AGG 0.597535 8_1:-66661660 Msa1208530:three_prime_UTR
TTCTGCTGAAGGAATCTCCA+TGG 0.597635 8_1:+66662569 None:intergenic
CCAAGGCAATATCTGAAGGA+TGG 0.597668 8_1:-66662395 Msa1208530:CDS
CAGAACTTGTGGAAAGACGA+TGG 0.601439 8_1:-66662755 Msa1208530:CDS
TCAGCTGATTGGTGGTGATG+AGG 0.602174 8_1:+66661621 None:intergenic
CAATCCAGCTGGTGAAAATG+GGG 0.602846 8_1:-66662355 Msa1208530:CDS
GTGACGTGTTTGTGTTATTG+GGG 0.603994 8_1:-66665138 Msa1208530:five_prime_UTR
CCATCACATTAAGCATGCAT+AGG 0.607095 8_1:+66661092 None:intergenic
AAATCCATCCCTAATCTGTG+TGG 0.607645 8_1:+66662986 None:intergenic
GGGGCAGAGGAATCAAATGA+TGG 0.608075 8_1:+66661482 None:intergenic
CACATCAAAGCTCCTGCTGG+TGG 0.608523 8_1:-66664990 Msa1208530:CDS
GCATTCTGGAAAGTTAGGGC+GGG 0.610221 8_1:-66664922 Msa1208530:CDS
GATGTCTAGCTAAACTACCC+AGG 0.612303 8_1:-66661458 Msa1208530:three_prime_UTR
ATGGGAGGACAACATGCCCT+GGG 0.612334 8_1:+66661441 None:intergenic
TGTGGAGCATGCACAGACCA+AGG 0.614176 8_1:-66661516 Msa1208530:three_prime_UTR
GGATTCACCCGGATTAAGGA+GGG 0.622780 8_1:-66661593 Msa1208530:three_prime_UTR
TTGTGAAAGTGATGAATCGG+TGG 0.625302 8_1:+66665640 None:intergenic
AGAACTTGTGGAAAGACGAT+GGG 0.626205 8_1:-66662754 Msa1208530:CDS
ATGTCTAGCTAAACTACCCA+GGG 0.627380 8_1:-66661457 Msa1208530:three_prime_UTR
ATCTGCTGATGATCTTGCAG+TGG 0.629980 8_1:-66662949 Msa1208530:CDS
TATCATAATTTGGATCATTG+CGG 0.630208 8_1:+66663599 None:intergenic
GCCAGTGTATTCGTGACTTG+GGG 0.631751 8_1:-66661748 Msa1208530:CDS
CTTTCTTGAATTCATCCAAG+GGG 0.633512 8_1:+66663207 None:intergenic
AGTTGCATTCTTCCATCACG+AGG 0.633964 8_1:-66662616 Msa1208530:CDS
TTGCTGTGAGGCATGTGCGT+CGG 0.634726 8_1:-66664947 Msa1208530:CDS
TCTTGGAGGAGTATGAAAGT+GGG 0.639560 8_1:-66661789 Msa1208530:CDS
GCTCTTCCGGAATCTTCCAA+GGG 0.641419 8_1:-66662831 Msa1208530:CDS
AAATGCTGAAGATACAACGC+TGG 0.642106 8_1:-66662055 Msa1208530:CDS
GTGGATGCAGATGGTGCTGG+TGG 0.644646 8_1:-66663673 Msa1208530:intron
TATAGAGATATTCTCAACAG+AGG 0.644683 8_1:-66662109 Msa1208530:CDS
GGAATCTTCCAAGGGAGCTG+AGG 0.644900 8_1:-66662823 Msa1208530:CDS
AAGTAAAAGAGCAAATGGAA+AGG 0.644978 8_1:+66661383 None:intergenic
TCTGGACATTCCAAACGCCA+AGG 0.645925 8_1:-66661555 Msa1208530:three_prime_UTR
CTTGGAGGAGTATGAAAGTG+GGG 0.647798 8_1:-66661788 Msa1208530:CDS
TAATCTGGGATTGTTTGACA+TGG 0.648822 8_1:-66661407 Msa1208530:three_prime_UTR
CACGTGCCAGGAATAAAGCA+AGG 0.649502 8_1:+66662904 None:intergenic
TTGGAGGAGTATGAAAGTGG+GGG 0.650081 8_1:-66661787 Msa1208530:CDS
AAGTTGAAGATGAGAATGTG+AGG 0.655201 8_1:-66662326 Msa1208530:CDS
GCCAAGACAGGAGAAGACAG+TGG 0.655220 8_1:+66665513 None:intergenic
ATTATCCCATCTTCAATGGG+AGG 0.656417 8_1:+66661426 None:intergenic
GGGGACAAATGACTGAAACA+AGG 0.656814 8_1:+66662416 None:intergenic
GCCCTGGCAAGAAAGGCTGG+TGG 0.659425 8_1:+66662861 None:intergenic
AGCATGCACAGACCAAGGGG+TGG 0.663824 8_1:-66661511 Msa1208530:three_prime_UTR
TCTTCTAGATCATTTCACTG+AGG 0.665538 8_1:-66661352 Msa1208530:three_prime_UTR
AGCTGACTAAAGGATTCACC+CGG 0.666003 8_1:-66661604 Msa1208530:three_prime_UTR
GGATGAATTCAAGAAAGCAG+TGG 0.666447 8_1:-66663201 Msa1208530:CDS
AAAGTGATGAATCGGTGGAA+AGG 0.668878 8_1:+66665645 None:intergenic
AGATGAATACTTCAGTAATG+GGG 0.676923 8_1:-66663168 Msa1208530:CDS
AATCTCCATGGCAAGTACCA+GGG 0.677633 8_1:+66662581 None:intergenic
GAAAGGCTATTGAGATGCTG+GGG 0.679754 8_1:-66661862 Msa1208530:CDS
GCGAGACACTTGAAGCCTGT+AGG 0.680196 8_1:-66662656 Msa1208530:CDS
TGGAGCATGCACAGACCAAG+GGG 0.681884 8_1:-66661514 Msa1208530:three_prime_UTR
TGATCAGCAAGCAATGTCGA+CGG 0.684900 8_1:+66665017 None:intergenic
GTAGTTTAGCTAGACATCTG+GGG 0.685216 8_1:+66661463 None:intergenic
CTTGTGGAAAGACGATGGGG+TGG 0.687294 8_1:-66662750 Msa1208530:CDS
TCCCCAAGTCACGAATACAC+TGG 0.687638 8_1:+66661747 None:intergenic
ATCCTTCAGATATTGCCTTG+GGG 0.691723 8_1:+66662397 None:intergenic
AGACTGCTGGGATTGCTGTG+AGG 0.694684 8_1:-66664959 Msa1208530:CDS
AGACTACCACCAAAATGCAG+TGG 0.698145 8_1:-66661937 Msa1208530:CDS
TGGAGGAGTATGAAAGTGGG+GGG 0.698174 8_1:-66661786 Msa1208530:CDS
TCCAAATTATGATAGTGGCG+AGG 0.698403 8_1:-66663590 Msa1208530:intron
GATGCCTTTCTTCAACCATG+AGG 0.721876 8_1:-66661726 Msa1208530:CDS
AATATCGAAACCCTAAACGG+TGG 0.740443 8_1:+66665577 None:intergenic
AATTTCATCCAAGTTCAATG+GGG 0.741522 8_1:+66661966 None:intergenic
GAACTTGTGGAAAGACGATG+GGG 0.755832 8_1:-66662753 Msa1208530:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATTTTTTTCTTTGATT+TGG - chr8_1:66661343-66661362 Msa1208530:three_prime_UTR 10.0%
!! TTTATACATATTAGTTATAA+CGG - chr8_1:66662304-66662323 Msa1208530:CDS 10.0%
!! TTTATACATATAAGTTATAA+CGG - chr8_1:66662406-66662425 Msa1208530:CDS 10.0%
!! GAAAATAATTTATACATATA+AGG - chr8_1:66662398-66662417 Msa1208530:CDS 10.0%
!! TAGTATATATTTAGATGAAT+AGG - chr8_1:66661992-66662011 Msa1208530:CDS 15.0%
!!! TAAATTATTTTCCTAAAAAG+TGG + chr8_1:66662288-66662307 None:intergenic 15.0%
!!! TAAATTATTTTCCTAAAAAG+TGG + chr8_1:66662288-66662307 None:intergenic 15.0%
!!! TAAATTATTTTCCTAAAAAG+TGG + chr8_1:66662288-66662307 None:intergenic 15.0%
!! TTTATACATATAAGGTATAA+CGG - chr8_1:66662508-66662527 Msa1208530:CDS 15.0%
!!! TTACCAATTGTTTTTTTTAA+TGG - chr8_1:66662996-66663015 Msa1208530:CDS 15.0%
!!! ATTATTTCTGTTATTTCTTG+CGG - chr8_1:66661450-66661469 Msa1208530:three_prime_UTR 20.0%
!!! TAGGATTTTCAAAGTTTATT+CGG - chr8_1:66662023-66662042 Msa1208530:CDS 20.0%
!! AGTGAATTTACTAGAAATTT+AGG + chr8_1:66662859-66662878 None:intergenic 20.0%
!!! TTTGGATAATTTTCATAAAC+TGG - chr8_1:66662890-66662909 Msa1208530:CDS 20.0%
!! AGACCATTAAAAAAAACAAT+TGG + chr8_1:66663002-66663021 None:intergenic 20.0%
!!! TTTTATCATTCTGATTTTGT+TGG - chr8_1:66663169-66663188 Msa1208530:CDS 20.0%
!! CAAACTATCTTAAAAAAAGA+TGG - chr8_1:66663265-66663284 Msa1208530:intron 20.0%
!! TTAACCTCTTCAAAAATATT+GGG + chr8_1:66664530-66664549 None:intergenic 20.0%
!! ATTAACCTCTTCAAAAATAT+TGG + chr8_1:66664531-66664550 None:intergenic 20.0%
!! AGTTTGAAAGATATATCAAT+TGG - chr8_1:66665551-66665570 Msa1208530:five_prime_UTR 20.0%
!! TTTTTGTGAAAGTGATGAAT+CGG + chr8_1:66661092-66661111 None:intergenic 25.0%
! AGTGAAATGAAAATGCAAAT+CGG + chr8_1:66661273-66661292 None:intergenic 25.0%
! ATGTTAATGCTGTTATTGAT+AGG - chr8_1:66661560-66661579 Msa1208530:three_prime_UTR 25.0%
!! TAAGCTGTAGTATTTTACTT+AGG - chr8_1:66661913-66661932 Msa1208530:CDS 25.0%
!! AGGATTTTCAAAGTTTATTC+GGG - chr8_1:66662024-66662043 Msa1208530:CDS 25.0%
!!! TTACTTTATTTCGTCTTTTG+CGG - chr8_1:66662083-66662102 Msa1208530:CDS 25.0%
!!! GTTATTGTTTCTGATAAATG+TGG - chr8_1:66662159-66662178 Msa1208530:CDS 25.0%
!!! AAGTCATTCATTATTTCTGA+AGG - chr8_1:66662655-66662674 Msa1208530:CDS 25.0%
! GTAATAGTGTTAACTAAACT+AGG + chr8_1:66662700-66662719 None:intergenic 25.0%
! ATTCACTTGCACATATTATT+TGG - chr8_1:66662872-66662891 Msa1208530:CDS 25.0%
! TATCATAATTTGGATCATTG+CGG + chr8_1:66663130-66663149 None:intergenic 25.0%
! AATGATCCAAATTATGATAG+TGG - chr8_1:66663131-66663150 Msa1208530:CDS 25.0%
! TACAGAAGAGTTAACAATAT+GGG + chr8_1:66663359-66663378 None:intergenic 25.0%
! TAGAATGGAAAAAATAAAGC+AGG + chr8_1:66663389-66663408 None:intergenic 25.0%
!! TGCATACTTTTGCATTTTAT+AGG - chr8_1:66663462-66663481 Msa1208530:intron 25.0%
! ATAGATGAATACTTCAGTAA+TGG - chr8_1:66663556-66663575 Msa1208530:intron 25.0%
! TAGATGAATACTTCAGTAAT+GGG - chr8_1:66663557-66663576 Msa1208530:intron 25.0%
!! CTTAAAGAATATGTTGATAG+TGG - chr8_1:66664048-66664067 Msa1208530:intron 25.0%
! AAAAATATTGGGTTATACTC+AGG + chr8_1:66664519-66664538 None:intergenic 25.0%
!!! ATAACCCAATATTTTTGAAG+AGG - chr8_1:66664523-66664542 Msa1208530:intron 25.0%
!! ATAGAAAGCAAATTTTTCCT+TGG + chr8_1:66665191-66665210 None:intergenic 25.0%
!! TATTTCATTTACAGCTTTTC+AGG - chr8_1:66665432-66665451 Msa1208530:intron 25.0%
! TCAAACTAAACTTGATCTAA+TGG + chr8_1:66665538-66665557 None:intergenic 25.0%
!!! TATTTTTAGATTCCTGGTTT+CGG - chr8_1:66665578-66665597 Msa1208530:five_prime_UTR 25.0%
AAGAATATCGAAACCCTAAA+CGG + chr8_1:66661155-66661174 None:intergenic 30.0%
! GATTTGCATTTTCATTTCAC+TGG - chr8_1:66661272-66661291 Msa1208530:three_prime_UTR 30.0%
!! GTGTTCGTTTTGAATTGAAA+CGG - chr8_1:66661493-66661512 Msa1208530:three_prime_UTR 30.0%
!! AAACGGTTATTGATTTCGTT+AGG - chr8_1:66661510-66661529 Msa1208530:three_prime_UTR 30.0%
! TAGTATTTTACTTAGGCTGT+TGG - chr8_1:66661920-66661939 Msa1208530:CDS 30.0%
!! TAGAAGAAAGACTTTTGAGA+AGG - chr8_1:66661960-66661979 Msa1208530:CDS 30.0%
AGATGAATAGGTGATAGATT+AGG - chr8_1:66662004-66662023 Msa1208530:CDS 30.0%
! CTATCAGTTCTAATTGATTG+GGG + chr8_1:66662236-66662255 None:intergenic 30.0%
! CCTATCAGTTCTAATTGATT+GGG + chr8_1:66662237-66662256 None:intergenic 30.0%
! ACCTATCAGTTCTAATTGAT+TGG + chr8_1:66662238-66662257 None:intergenic 30.0%
CTAAAAAGTGGTATTGTATC+TGG + chr8_1:66662378-66662397 None:intergenic 30.0%
!!! CAGATACAATACCACTTTTT+AGG - chr8_1:66662376-66662395 Msa1208530:CDS 30.0%
! TCTGTGAATGATTGCATTTT+CGG - chr8_1:66662432-66662451 Msa1208530:CDS 30.0%
! AATGATTGCATTTTCGGTAT+AGG - chr8_1:66662438-66662457 Msa1208530:CDS 30.0%
! TCTGTGAATGATTGCATTTT+TGG - chr8_1:66662432-66662451 Msa1208530:CDS 30.0%
!!! ATGATTGCATTTTTGGTACA+TGG - chr8_1:66662541-66662560 Msa1208530:CDS 30.0%
!!! TGATTGCATTTTTGGTACAT+GGG - chr8_1:66662542-66662561 Msa1208530:CDS 30.0%
! TTTTGTCGTAGTTGCATTTT+CGG - chr8_1:66662567-66662586 Msa1208530:CDS 30.0%
!! GATCAATAAGATTAGCTTCA+TGG + chr8_1:66662743-66662762 None:intergenic 30.0%
AGCTAATCTTATTGATCATG+AGG - chr8_1:66662746-66662765 Msa1208530:CDS 30.0%
! GGATAATTTTCATAAACTGG+AGG - chr8_1:66662893-66662912 Msa1208530:CDS 30.0%
CATGCGATAATAATCTACAT+TGG - chr8_1:66663023-66663042 Msa1208530:CDS 30.0%
GTACAGAAGAGTTAACAATA+TGG + chr8_1:66663360-66663379 None:intergenic 30.0%
ACAACAAGAGAAAGATAGAA+TGG + chr8_1:66663404-66663423 None:intergenic 30.0%
! ACTGAAGTATTCATCTATGA+GGG + chr8_1:66663554-66663573 None:intergenic 30.0%
! TACTGAAGTATTCATCTATG+AGG + chr8_1:66663555-66663574 None:intergenic 30.0%
AGATGAATACTTCAGTAATG+GGG - chr8_1:66663558-66663577 Msa1208530:intron 30.0%
TTTAACAGCTTCAACAGTAA+AGG + chr8_1:66664183-66664202 None:intergenic 30.0%
! TTTCCTTTTCTCTGTTCTTT+CGG + chr8_1:66664569-66664588 None:intergenic 30.0%
AAAGAACAGAGAAAAGGAAA+TGG - chr8_1:66664569-66664588 Msa1208530:intron 30.0%
TATAGAGATATTCTCAACAG+AGG - chr8_1:66664617-66664636 Msa1208530:intron 30.0%
TCAACAGAGGATATTGTTAA+TGG - chr8_1:66664630-66664649 Msa1208530:intron 30.0%
AATTTCATCCAAGTTCAATG+GGG + chr8_1:66664763-66664782 None:intergenic 30.0%
CAATTTCATCCAAGTTCAAT+GGG + chr8_1:66664764-66664783 None:intergenic 30.0%
! GGAAAAATTTGCTTTCTATG+TGG - chr8_1:66665192-66665211 Msa1208530:intron 30.0%
AAGTAAAAGAGCAAATGGAA+AGG + chr8_1:66665346-66665365 None:intergenic 30.0%
ATGTCAAGTAAAAGAGCAAA+TGG + chr8_1:66665351-66665370 None:intergenic 30.0%
! CTTTTAACATTTACTCTCTC+TGG - chr8_1:66665481-66665500 Msa1208530:five_prime_UTR 30.0%
!! AGACAGTGGATTTTCCAAAT+CGG + chr8_1:66661202-66661221 None:intergenic 35.0%
ATGAAAATGCAAATCGGAAC+TGG + chr8_1:66661267-66661286 None:intergenic 35.0%
! TGTTTGTGTTATTGGGGAAA+TGG - chr8_1:66661594-66661613 Msa1208530:three_prime_UTR 35.0%
!! ATTTTTGACTGAAGGACAGA+GGG - chr8_1:66661630-66661649 Msa1208530:three_prime_UTR 35.0%
TGATTCTATATGCTATGCTG+TGG - chr8_1:66661872-66661891 Msa1208530:CDS 35.0%
CCCAATCAATTAGAACTGAT+AGG - chr8_1:66662234-66662253 Msa1208530:CDS 35.0%
CTAAAAAGTGGTATCGTATC+TGG + chr8_1:66662276-66662295 None:intergenic 35.0%
!!! CAGATACGATACCACTTTTT+AGG - chr8_1:66662274-66662293 Msa1208530:CDS 35.0%
! TCTGTGAATGATCGCATTTT+CGG - chr8_1:66662330-66662349 Msa1208530:CDS 35.0%
! AATGATCGCATTTTCGGTAT+AGG - chr8_1:66662336-66662355 Msa1208530:CDS 35.0%
CTAAAAAGTGGTATCGTATC+TGG + chr8_1:66662276-66662295 None:intergenic 35.0%
!!! CAGATACGATACCACTTTTT+AGG - chr8_1:66662274-66662293 Msa1208530:CDS 35.0%
! TAGTTGCATTTTCGGTACAT+GGG - chr8_1:66662575-66662594 Msa1208530:CDS 35.0%
! GGAAGCAAAATCATTTTCGT+TGG + chr8_1:66662722-66662741 None:intergenic 35.0%
TTATTGATCATGAGGTACAG+AGG - chr8_1:66662754-66662773 Msa1208530:CDS 35.0%
! TTTTCCTTTCTCCCAAATTC+AGG - chr8_1:66662946-66662965 Msa1208530:CDS 35.0%
TTTCCTTTCTCCCAAATTCA+GGG - chr8_1:66662947-66662966 Msa1208530:CDS 35.0%
CACATATTAGCCCTGAATTT+GGG + chr8_1:66662960-66662979 None:intergenic 35.0%
TCACATATTAGCCCTGAATT+TGG + chr8_1:66662961-66662980 None:intergenic 35.0%
AATCTACATTGGTCATCTTG+TGG - chr8_1:66663034-66663053 Msa1208530:CDS 35.0%
GTTAACAATATGGGTCTGTT+TGG + chr8_1:66663350-66663369 None:intergenic 35.0%
GAAAAAATAAAGCAGGCAAC+AGG + chr8_1:66663382-66663401 None:intergenic 35.0%
CTTTCTTGAATTCATCCAAG+GGG + chr8_1:66663522-66663541 None:intergenic 35.0%
GCTTTCTTGAATTCATCCAA+GGG + chr8_1:66663523-66663542 None:intergenic 35.0%
TGCTTTCTTGAATTCATCCA+AGG + chr8_1:66663524-66663543 None:intergenic 35.0%
ACAAGTCGCTTAATGAAGTA+TGG + chr8_1:66663637-66663656 None:intergenic 35.0%
GCATGATAAGGAGAAAGAAA+TGG - chr8_1:66663675-66663694 Msa1208530:intron 35.0%
TATCAAGAGCAAGATCATCT+AGG + chr8_1:66664275-66664294 None:intergenic 35.0%
TCACATTCTCATCTTCAACT+TGG + chr8_1:66664401-66664420 None:intergenic 35.0%
AAGTTGAAGATGAGAATGTG+AGG - chr8_1:66664400-66664419 Msa1208530:intron 35.0%
! GAATGTGAGGAAGTACAAAA+AGG - chr8_1:66664413-66664432 Msa1208530:intron 35.0%
GAGGTTAATAACACTTGCTT+TGG - chr8_1:66664542-66664561 Msa1208530:intron 35.0%
!!! TAATGGTTTTGTCATGCTTC+TGG - chr8_1:66664647-66664666 Msa1208530:intron 35.0%
CCAATTTCATCCAAGTTCAA+TGG + chr8_1:66664765-66664784 None:intergenic 35.0%
CCATTGAACTTGGATGAAAT+TGG - chr8_1:66664762-66664781 Msa1208530:intron 35.0%
! AGTGAAGAAAGCTTTGGTTA+TGG - chr8_1:66665024-66665043 Msa1208530:CDS 35.0%
CAGATTATCCCATCTTCAAT+GGG + chr8_1:66665306-66665325 None:intergenic 35.0%
CATTGAAGATGGGATAATCT+GGG - chr8_1:66665305-66665324 Msa1208530:intron 35.0%
! TAATCTGGGATTGTTTGACA+TGG - chr8_1:66665319-66665338 Msa1208530:intron 35.0%
TCTTCTAGATCATTTCACTG+AGG - chr8_1:66665374-66665393 Msa1208530:intron 35.0%
TTTACAATGACCGAAGTAAC+AGG + chr8_1:66665402-66665421 None:intergenic 35.0%
CTTCGGTCATTGTAAAAAGT+TGG - chr8_1:66665406-66665425 Msa1208530:intron 35.0%
ATTTACTCTCTCTGGATGAA+GGG - chr8_1:66665489-66665508 Msa1208530:five_prime_UTR 35.0%
!!! GGCTACTATTTTTAGATTCC+TGG - chr8_1:66665572-66665591 Msa1208530:five_prime_UTR 35.0%
AAAGTGATGAATCGGTGGAA+AGG + chr8_1:66661084-66661103 None:intergenic 40.0%
TTGTGAAAGTGATGAATCGG+TGG + chr8_1:66661089-66661108 None:intergenic 40.0%
AATATCGAAACCCTAAACGG+TGG + chr8_1:66661152-66661171 None:intergenic 40.0%
ACGTGACGTGTTTGTGTTAT+TGG - chr8_1:66661586-66661605 Msa1208530:three_prime_UTR 40.0%
! CGTGACGTGTTTGTGTTATT+GGG - chr8_1:66661587-66661606 Msa1208530:three_prime_UTR 40.0%
! GTGACGTGTTTGTGTTATTG+GGG - chr8_1:66661588-66661607 Msa1208530:three_prime_UTR 40.0%
!! AACGAGGGATTTTTGACTGA+AGG - chr8_1:66661622-66661641 Msa1208530:three_prime_UTR 40.0%
!! GATTTTTGACTGAAGGACAG+AGG - chr8_1:66661629-66661648 Msa1208530:three_prime_UTR 40.0%
GGCTGTTGGATTTCTTGAAA+AGG - chr8_1:66661934-66661953 Msa1208530:CDS 40.0%
! ATTTCGTCTTTTGCGGCTAA+TGG - chr8_1:66662090-66662109 Msa1208530:CDS 40.0%
!!! GGCTAATGGCTTTTTTGCAA+TGG - chr8_1:66662104-66662123 Msa1208530:CDS 40.0%
! TCAGTTCTAATTGATTGGGG+AGG + chr8_1:66662233-66662252 None:intergenic 40.0%
! GTAGTTGCATTTTCGGTACA+TGG - chr8_1:66662574-66662593 Msa1208530:CDS 40.0%
! ACATGGGCATTTTGTCGTAT+TGG - chr8_1:66662591-66662610 Msa1208530:CDS 40.0%
TTTCTTCCCATCATTCCCAA+GGG - chr8_1:66662628-66662647 Msa1208530:CDS 40.0%
ATGAATGACTTTCCACCCTT+GGG + chr8_1:66662646-66662665 None:intergenic 40.0%
AATGAATGACTTTCCACCCT+TGG + chr8_1:66662647-66662666 None:intergenic 40.0%
GTGGACATCAATGCAAAACA+AGG - chr8_1:66662776-66662795 Msa1208530:CDS 40.0%
!! TCCAAATTATGATAGTGGCG+AGG - chr8_1:66663136-66663155 Msa1208530:CDS 40.0%
ACCTCGCCACTATCATAATT+TGG + chr8_1:66663140-66663159 None:intergenic 40.0%
TATGGGTCTGTTTGGAAGAT+TGG + chr8_1:66663342-66663361 None:intergenic 40.0%
TTTATAGGAACCCTATGAGC+TGG - chr8_1:66663477-66663496 Msa1208530:intron 40.0%
GGATGAATTCAAGAAAGCAG+TGG - chr8_1:66663525-66663544 Msa1208530:intron 40.0%
! CAGTAATGGGGATGTTGATT+TGG - chr8_1:66663570-66663589 Msa1208530:intron 40.0%
! CATTAAGCGACTTGTTTCCA+TGG - chr8_1:66663642-66663661 Msa1208530:CDS 40.0%
TCATTAGTCCCACACAGATT+AGG - chr8_1:66663731-66663750 Msa1208530:intron 40.0%
CATTAGTCCCACACAGATTA+GGG - chr8_1:66663732-66663751 Msa1208530:intron 40.0%
AATCCATCCCTAATCTGTGT+GGG + chr8_1:66663742-66663761 None:intergenic 40.0%
AAATCCATCCCTAATCTGTG+TGG + chr8_1:66663743-66663762 None:intergenic 40.0%
! TGACATCCTTGCTTTATTCC+TGG - chr8_1:66663816-66663835 Msa1208530:intron 40.0%
AGAACTTGTGGAAAGACGAT+GGG - chr8_1:66663972-66663991 Msa1208530:intron 40.0%
TGTAGGTGTATACGTGAGTT+GGG - chr8_1:66664087-66664106 Msa1208530:intron 40.0%
AACAGTAAAGGTTCTGCTGA+AGG + chr8_1:66664171-66664190 None:intergenic 40.0%
TTAAAAGAAGCAGCAGCAGA+AGG - chr8_1:66664198-66664217 Msa1208530:intron 40.0%
! ACTGATTAGTTCCAGCCAAA+TGG - chr8_1:66664221-66664240 Msa1208530:intron 40.0%
GAGAAAACCCTTTCACCATT+TGG + chr8_1:66664239-66664258 None:intergenic 40.0%
! TGAAACAAGGCTTTAGCTGA+TGG + chr8_1:66664300-66664319 None:intergenic 40.0%
ATCCTTCAGATATTGCCTTG+GGG + chr8_1:66664332-66664351 None:intergenic 40.0%
CATCCTTCAGATATTGCCTT+GGG + chr8_1:66664333-66664352 None:intergenic 40.0%
ATTCGAAGCCTAGAAGATCT+TGG - chr8_1:66664489-66664508 Msa1208530:intron 40.0%
CTATATGAAGTGCAGATAGC+AGG + chr8_1:66664602-66664621 None:intergenic 40.0%
AAATGCTGAAGATACAACGC+TGG - chr8_1:66664671-66664690 Msa1208530:intron 40.0%
AGATACAACGCTGGATATAC+TGG - chr8_1:66664680-66664699 Msa1208530:intron 40.0%
!!! AGCTTGCTCTGTTTTTAGCT+CGG - chr8_1:66664715-66664734 Msa1208530:intron 40.0%
! GTTTCACTACCACTGCATTT+TGG + chr8_1:66664801-66664820 None:intergenic 40.0%
TGAAAGGCTATTGAGATGCT+GGG - chr8_1:66664863-66664882 Msa1208530:intron 40.0%
! TCTTGGAGGAGTATGAAAGT+GGG - chr8_1:66664937-66664956 Msa1208530:CDS 40.0%
ACTACCTCATGGTTGAAGAA+AGG + chr8_1:66665007-66665026 None:intergenic 40.0%
AAGCTTTCTTCACTACCTCA+TGG + chr8_1:66665018-66665037 None:intergenic 40.0%
TGAGGTAGTGAAGAAAGCTT+TGG - chr8_1:66665018-66665037 Msa1208530:CDS 40.0%
CCTATCATTCTTCTTCTCCA+TGG + chr8_1:66665050-66665069 None:intergenic 40.0%
CCATGGAGAAGAAGAATGAT+AGG - chr8_1:66665047-66665066 Msa1208530:CDS 40.0%
GAAGAAGAATGATAGGATGC+TGG - chr8_1:66665054-66665073 Msa1208530:CDS 40.0%
GAATCCTTTAGTCAGCTGAT+TGG + chr8_1:66665119-66665138 None:intergenic 40.0%
TAAAGGATTCACCCGGATTA+AGG - chr8_1:66665129-66665148 Msa1208530:exon 40.0%
! GCAAATTTTTCCTTGGCGTT+TGG + chr8_1:66665184-66665203 None:intergenic 40.0%
GTAGTTTAGCTAGACATCTG+GGG + chr8_1:66665266-66665285 None:intergenic 40.0%
GGTAGTTTAGCTAGACATCT+GGG + chr8_1:66665267-66665286 None:intergenic 40.0%
ATGTCTAGCTAAACTACCCA+GGG - chr8_1:66665269-66665288 Msa1208530:intron 40.0%
ATTATCCCATCTTCAATGGG+AGG + chr8_1:66665303-66665322 None:intergenic 40.0%
CCAGATTATCCCATCTTCAA+TGG + chr8_1:66665307-66665326 None:intergenic 40.0%
CCATTGAAGATGGGATAATC+TGG - chr8_1:66665304-66665323 Msa1208530:intron 40.0%
CAGGATAATGTTGCATCAAG+AGG - chr8_1:66665451-66665470 Msa1208530:intron 40.0%
CATTTACTCTCTCTGGATGA+AGG - chr8_1:66665488-66665507 Msa1208530:five_prime_UTR 40.0%
CACATTAAGCATGCATAGGT+GGG + chr8_1:66665633-66665652 None:intergenic 40.0%
TCACATTAAGCATGCATAGG+TGG + chr8_1:66665634-66665653 None:intergenic 40.0%
CCATCACATTAAGCATGCAT+AGG + chr8_1:66665637-66665656 None:intergenic 40.0%
CCTATGCATGCTTAATGTGA+TGG - chr8_1:66665634-66665653 Msa1208530:five_prime_UTR 40.0%
AAACGGTGGTGTGAGAGAAA+CGG + chr8_1:66661138-66661157 None:intergenic 45.0%
TTTCTCTCACACCACCGTTT+AGG - chr8_1:66661138-66661157 Msa1208530:three_prime_UTR 45.0%
TTCTCTCACACCACCGTTTA+GGG - chr8_1:66661139-66661158 Msa1208530:three_prime_UTR 45.0%
CGTTGTTGCAGTTTCCGATT+TGG - chr8_1:66661185-66661204 Msa1208530:three_prime_UTR 45.0%
GAACTGGAATCTTCTGTGCT+TGG + chr8_1:66661251-66661270 None:intergenic 45.0%
TGATCAGCAAGCAATGTCGA+CGG + chr8_1:66661712-66661731 None:intergenic 45.0%
! GGTCGCATTCTGGAAAGTTA+GGG - chr8_1:66661800-66661819 Msa1208530:CDS 45.0%
AGGGTGAGTTGTGTGTTCTT+TGG - chr8_1:66661833-66661852 Msa1208530:CDS 45.0%
CTTTCTTCCCATCATTCCCA+AGG - chr8_1:66662627-66662646 Msa1208530:CDS 45.0%
TTTCCACCCTTGGGAATGAT+GGG + chr8_1:66662637-66662656 None:intergenic 45.0%
TTGATCATGAGGTACAGAGG+TGG - chr8_1:66662757-66662776 Msa1208530:CDS 45.0%
TAGCCCTGAATTTGGGAGAA+AGG + chr8_1:66662953-66662972 None:intergenic 45.0%
GTCTGTTTGGAAGATTGGAG+GGG + chr8_1:66663337-66663356 None:intergenic 45.0%
GGTCTGTTTGGAAGATTGGA+GGG + chr8_1:66663338-66663357 None:intergenic 45.0%
GTAGTTCCAACCAGCTCATA+GGG + chr8_1:66663490-66663509 None:intergenic 45.0%
AGTAGTTCCAACCAGCTCAT+AGG + chr8_1:66663491-66663510 None:intergenic 45.0%
AACTACTGTTACTGACCCCT+TGG - chr8_1:66663504-66663523 Msa1208530:intron 45.0%
GCATCTGACCTAAGAGAACT+TGG - chr8_1:66663595-66663614 Msa1208530:CDS 45.0%
CACTTGAGCCAAGTTCTCTT+AGG + chr8_1:66663606-66663625 None:intergenic 45.0%
TTGTTTCCATGGCAATGGAC+AGG - chr8_1:66663653-66663672 Msa1208530:CDS 45.0%
ATCTGCTGATGATCTTGCAG+TGG - chr8_1:66663777-66663796 Msa1208530:intron 45.0%
TGATCTTGCAGTGGATATCC+TGG - chr8_1:66663786-66663805 Msa1208530:intron 45.0%
AGCTGAGAGATAGCTCTTCT+CGG + chr8_1:66663941-66663960 None:intergenic 45.0%
GTCTTTCCACAAGTTCTGCA+TGG + chr8_1:66663969-66663988 None:intergenic 45.0%
CAGAACTTGTGGAAAGACGA+TGG - chr8_1:66663971-66663990 Msa1208530:intron 45.0%
GAACTTGTGGAAAGACGATG+GGG - chr8_1:66663973-66663992 Msa1208530:intron 45.0%
CAACTCACGTATACACCTAC+AGG + chr8_1:66664088-66664107 None:intergenic 45.0%
CTGTAGGTGTATACGTGAGT+TGG - chr8_1:66664086-66664105 Msa1208530:intron 45.0%
AGTTGCATTCTTCCATCACG+AGG - chr8_1:66664110-66664129 Msa1208530:intron 45.0%
AATCTCCATGGCAAGTACCA+GGG + chr8_1:66664148-66664167 None:intergenic 45.0%
TTCTGCTGAAGGAATCTCCA+TGG + chr8_1:66664160-66664179 None:intergenic 45.0%
AGTTCCAGCCAAATGGTGAA+AGG - chr8_1:66664228-66664247 Msa1208530:intron 45.0%
GTTCCAGCCAAATGGTGAAA+GGG - chr8_1:66664229-66664248 Msa1208530:intron 45.0%
AAACCCTTTCACCATTTGGC+TGG + chr8_1:66664235-66664254 None:intergenic 45.0%
! GGTGAAAGGGTTTTCTCGAT+TGG - chr8_1:66664242-66664261 Msa1208530:intron 45.0%
! GGGTTTTCTCGATTGGAAGA+AGG - chr8_1:66664249-66664268 Msa1208530:intron 45.0%
GGGGACAAATGACTGAAACA+AGG + chr8_1:66664313-66664332 None:intergenic 45.0%
GTTTCAGTCATTTGTCCCCA+AGG - chr8_1:66664314-66664333 Msa1208530:intron 45.0%
CCATCCTTCAGATATTGCCT+TGG + chr8_1:66664334-66664353 None:intergenic 45.0%
CCAAGGCAATATCTGAAGGA+TGG - chr8_1:66664331-66664350 Msa1208530:intron 45.0%
CCAATCCAGCTGGTGAAAAT+GGG - chr8_1:66664370-66664389 Msa1208530:intron 45.0%
CAATCCAGCTGGTGAAAATG+GGG - chr8_1:66664371-66664390 Msa1208530:intron 45.0%
! AATTCCCCATTTTCACCAGC+TGG + chr8_1:66664378-66664397 None:intergenic 45.0%
TCTAGGCTTCGAATGAGTTC+AGG + chr8_1:66664483-66664502 None:intergenic 45.0%
GGACCGAAAGAACAGAGAAA+AGG - chr8_1:66664563-66664582 Msa1208530:intron 45.0%
!!! GCTTGCTCTGTTTTTAGCTC+GGG - chr8_1:66664716-66664735 Msa1208530:intron 45.0%
TGTACTTGCCCCATTGAACT+TGG - chr8_1:66664752-66664771 Msa1208530:intron 45.0%
AGACTACCACCAAAATGCAG+TGG - chr8_1:66664789-66664808 Msa1208530:intron 45.0%
! TCACTACCACTGCATTTTGG+TGG + chr8_1:66664798-66664817 None:intergenic 45.0%
! TGGTAGTGAAACTGTGCGTA+TGG - chr8_1:66664809-66664828 Msa1208530:intron 45.0%
GTGAAAGGCTATTGAGATGC+TGG - chr8_1:66664862-66664881 Msa1208530:intron 45.0%
GAAAGGCTATTGAGATGCTG+GGG - chr8_1:66664864-66664883 Msa1208530:intron 45.0%
GGACAAGATCACAAAGCTCT+TGG - chr8_1:66664920-66664939 Msa1208530:CDS 45.0%
CAAGATCACAAAGCTCTTGG+AGG - chr8_1:66664923-66664942 Msa1208530:CDS 45.0%
! CTCTTGGAGGAGTATGAAAG+TGG - chr8_1:66664936-66664955 Msa1208530:CDS 45.0%
! CTTGGAGGAGTATGAAAGTG+GGG - chr8_1:66664938-66664957 Msa1208530:CDS 45.0%
! TTGGAGGAGTATGAAAGTGG+GGG - chr8_1:66664939-66664958 Msa1208530:CDS 45.0%
ATGCCAGTGTATTCGTGACT+TGG - chr8_1:66664976-66664995 Msa1208530:CDS 45.0%
TGCCAGTGTATTCGTGACTT+GGG - chr8_1:66664977-66664996 Msa1208530:CDS 45.0%
GATGCCTTTCTTCAACCATG+AGG - chr8_1:66665000-66665019 Msa1208530:CDS 45.0%
! GAAAGCTTTGGTTATGGCCA+TGG - chr8_1:66665030-66665049 Msa1208530:CDS 45.0%
ACCACCAATCAGCTGACTAA+AGG - chr8_1:66665112-66665131 Msa1208530:CDS 45.0%
TCCTTTAGTCAGCTGATTGG+TGG + chr8_1:66665116-66665135 None:intergenic 45.0%
AGCTGACTAAAGGATTCACC+CGG - chr8_1:66665122-66665141 Msa1208530:exon 45.0%
ATCAAGACCCTCCTTAATCC+GGG + chr8_1:66665143-66665162 None:intergenic 45.0%
CATCAAGACCCTCCTTAATC+CGG + chr8_1:66665144-66665163 None:intergenic 45.0%
! TAAGGAGGGTCTTGATGATC+TGG - chr8_1:66665147-66665166 Msa1208530:five_prime_UTR 45.0%
GGGTAGTTTAGCTAGACATC+TGG + chr8_1:66665268-66665287 None:intergenic 45.0%
GATGTCTAGCTAAACTACCC+AGG - chr8_1:66665268-66665287 Msa1208530:intron 45.0%
TGTTGTCCTCCCATTGAAGA+TGG - chr8_1:66665294-66665313 Msa1208530:intron 45.0%
GTTGTCCTCCCATTGAAGAT+GGG - chr8_1:66665295-66665314 Msa1208530:intron 45.0%
! CACTGAGGTTCCTGTTACTT+CGG - chr8_1:66665389-66665408 Msa1208530:intron 45.0%
GAAAATTGGAGACCGAAACC+AGG + chr8_1:66665593-66665612 None:intergenic 45.0%
!!! ATTTTAAATATTTTGAAAAT+TGG + chr8_1:66665607-66665626 None:intergenic 5.0%
TCCACTGTCTTCTCCTGTCT+TGG - chr8_1:66661212-66661231 Msa1208530:three_prime_UTR 50.0%
CATCACATCAAAGCTCCTGC+TGG - chr8_1:66661733-66661752 Msa1208530:CDS 50.0%
! CGGTCGCATTCTGGAAAGTT+AGG - chr8_1:66661799-66661818 Msa1208530:CDS 50.0%
! CGCATTCTGGAAAGTTAGGG+CGG - chr8_1:66661803-66661822 Msa1208530:CDS 50.0%
! GCATTCTGGAAAGTTAGGGC+GGG - chr8_1:66661804-66661823 Msa1208530:CDS 50.0%
!! AAAGTTAGGGCGGGCTAAGA+AGG - chr8_1:66661813-66661832 Msa1208530:CDS 50.0%
!! AAGTTAGGGCGGGCTAAGAA+GGG - chr8_1:66661814-66661833 Msa1208530:CDS 50.0%
CTTTCCACCCTTGGGAATGA+TGG + chr8_1:66662638-66662657 None:intergenic 50.0%
GGTCATCTTGTGGATGCAGA+TGG - chr8_1:66663044-66663063 Msa1208530:CDS 50.0%
TTTGGAAGATTGGAGGGGAG+GGG + chr8_1:66663332-66663351 None:intergenic 50.0%
GTTTGGAAGATTGGAGGGGA+GGG + chr8_1:66663333-66663352 None:intergenic 50.0%
TGTTTGGAAGATTGGAGGGG+AGG + chr8_1:66663334-66663353 None:intergenic 50.0%
GGGTCTGTTTGGAAGATTGG+AGG + chr8_1:66663339-66663358 None:intergenic 50.0%
TAGGAACCCTATGAGCTGGT+TGG - chr8_1:66663481-66663500 Msa1208530:intron 50.0%
! GCGACTTGTTTCCATGGCAA+TGG - chr8_1:66663648-66663667 Msa1208530:CDS 50.0%
ATCATGCCTGTCCATTGCCA+TGG + chr8_1:66663662-66663681 None:intergenic 50.0%
GGCAATGGACAGGCATGATA+AGG - chr8_1:66663663-66663682 Msa1208530:CDS 50.0%
AGTCCCACACAGATTAGGGA+TGG - chr8_1:66663736-66663755 Msa1208530:intron 50.0%
CAAGGATGTCAACTGCATCC+AGG + chr8_1:66663807-66663826 None:intergenic 50.0%
CACGTGCCAGGAATAAAGCA+AGG + chr8_1:66663825-66663844 None:intergenic 50.0%
GCTCTTCCGGAATCTTCCAA+GGG - chr8_1:66663895-66663914 Msa1208530:intron 50.0%
TCAGCTCCCTTGGAAGATTC+CGG + chr8_1:66663904-66663923 None:intergenic 50.0%
TCCACACCATGCAGAACTTG+TGG - chr8_1:66663960-66663979 Msa1208530:intron 50.0%
TCCACAAGTTCTGCATGGTG+TGG + chr8_1:66663964-66663983 None:intergenic 50.0%
CCTTCTTCACAACCTCGTGA+TGG + chr8_1:66664125-66664144 None:intergenic 50.0%
CCATCACGAGGTTGTGAAGA+AGG - chr8_1:66664122-66664141 Msa1208530:intron 50.0%
GAATCTCCATGGCAAGTACC+AGG + chr8_1:66664149-66664168 None:intergenic 50.0%
GTCCCCAAGGCAATATCTGA+AGG - chr8_1:66664327-66664346 Msa1208530:intron 50.0%
!! TTCACCAGCTGGATTGGCAA+AGG + chr8_1:66664367-66664386 None:intergenic 50.0%
GCCAATCCAGCTGGTGAAAA+TGG - chr8_1:66664369-66664388 Msa1208530:intron 50.0%
! CCCATTTTCACCAGCTGGAT+TGG + chr8_1:66664373-66664392 None:intergenic 50.0%
CAGGTGCTCCAAGATCTTCT+AGG + chr8_1:66664500-66664519 None:intergenic 50.0%
! TGGAGGAGTATGAAAGTGGG+GGG - chr8_1:66664940-66664959 Msa1208530:CDS 50.0%
GTATGAAAGTGGGGGGTTGT+CGG - chr8_1:66664947-66664966 Msa1208530:CDS 50.0%
GCCAGTGTATTCGTGACTTG+GGG - chr8_1:66664978-66664997 Msa1208530:CDS 50.0%
TCCCCAAGTCACGAATACAC+TGG + chr8_1:66664982-66665001 None:intergenic 50.0%
!! TAGGATGCTGGATTTGCTGC+AGG - chr8_1:66665066-66665085 Msa1208530:CDS 50.0%
!! TCAGCTGATTGGTGGTGATG+AGG + chr8_1:66665108-66665127 None:intergenic 50.0%
AGGATTCACCCGGATTAAGG+AGG - chr8_1:66665132-66665151 Msa1208530:exon 50.0%
GGATTCACCCGGATTAAGGA+GGG - chr8_1:66665133-66665152 Msa1208530:exon 50.0%
TCTGGACATTCCAAACGCCA+AGG - chr8_1:66665171-66665190 Msa1208530:intron 50.0%
GGGGCAGAGGAATCAAATGA+TGG + chr8_1:66665247-66665266 None:intergenic 50.0%
TCTCTGGATGAAGGGTCTGT+TGG - chr8_1:66665497-66665516 Msa1208530:five_prime_UTR 50.0%
GCCAAGACAGGAGAAGACAG+TGG + chr8_1:66661216-66661235 None:intergenic 55.0%
! TCCTGTCTTGGCTCGAGATC+CGG - chr8_1:66661224-66661243 Msa1208530:three_prime_UTR 55.0%
GGAATCTTCTGTGCTTGGCC+CGG + chr8_1:66661246-66661265 None:intergenic 55.0%
AGCAATGTCGACGGCGACTT+AGG + chr8_1:66661703-66661722 None:intergenic 55.0%
CACATCAAAGCTCCTGCTGG+TGG - chr8_1:66661736-66661755 Msa1208530:CDS 55.0%
CAAAGCTCCTGCTGGTGGTA+AGG - chr8_1:66661741-66661760 Msa1208530:CDS 55.0%
GTGGTAAGGCACAGACTGCT+GGG - chr8_1:66661755-66661774 Msa1208530:CDS 55.0%
AGACTGCTGGGATTGCTGTG+AGG - chr8_1:66661767-66661786 Msa1208530:CDS 55.0%
TTGCTGTGAGGCATGTGCGT+CGG - chr8_1:66661779-66661798 Msa1208530:CDS 55.0%
CTTCCCATCATTCCCAAGGG+TGG - chr8_1:66662631-66662650 Msa1208530:CDS 55.0%
CTTGTGGATGCAGATGGTGC+TGG - chr8_1:66663050-66663069 Msa1208530:CDS 55.0%
!! TGCAGATGGTGCTGGTGGTA+AGG - chr8_1:66663058-66663077 Msa1208530:CDS 55.0%
!! GCAGATGGTGCTGGTGGTAA+GGG - chr8_1:66663059-66663078 Msa1208530:CDS 55.0%
!! TGCTGGTGGTAAGGGCACTT+GGG - chr8_1:66663067-66663086 Msa1208530:CDS 55.0%
TTGGAGGGGAGGGGATTAGA+GGG + chr8_1:66663308-66663327 None:intergenic 55.0%
ATTGGAGGGGAGGGGATTAG+AGG + chr8_1:66663309-66663328 None:intergenic 55.0%
AAGATTGGAGGGGAGGGGAT+TGG + chr8_1:66663327-66663346 None:intergenic 55.0%
CATCAACAACAGCACGTGCC+AGG + chr8_1:66663837-66663856 None:intergenic 55.0%
TTCCACCAGCCTTTCTTGCC+AGG - chr8_1:66663863-66663882 Msa1208530:intron 55.0%
TCCACCAGCCTTTCTTGCCA+GGG - chr8_1:66663864-66663883 Msa1208530:intron 55.0%
CTTCCTTGCCCTGGCAAGAA+AGG + chr8_1:66663875-66663894 None:intergenic 55.0%
CTTTCTTGCCAGGGCAAGGA+AGG - chr8_1:66663873-66663892 Msa1208530:intron 55.0%
GGCTCTTCCGGAATCTTCCA+AGG - chr8_1:66663894-66663913 Msa1208530:intron 55.0%
GGAATCTTCCAAGGGAGCTG+AGG - chr8_1:66663903-66663922 Msa1208530:intron 55.0%
CTTGACTACCTCAGCTCCCT+TGG + chr8_1:66663914-66663933 None:intergenic 55.0%
CTTGTGGAAAGACGATGGGG+TGG - chr8_1:66663976-66663995 Msa1208530:intron 55.0%
GCGAGACACTTGAAGCCTGT+AGG - chr8_1:66664070-66664089 Msa1208530:intron 55.0%
GCTTCCTTTGCCAATCCAGC+TGG - chr8_1:66664360-66664379 Msa1208530:intron 55.0%
CTCTCTTCTGCTCGTCATGC+AGG - chr8_1:66664840-66664859 Msa1208530:intron 55.0%
CTGCTCGTCATGCAGGTGAA+AGG - chr8_1:66664847-66664866 Msa1208530:intron 55.0%
AGGCTATTGAGATGCTGGGG+CGG - chr8_1:66664867-66664886 Msa1208530:intron 55.0%
! ATGGGCTGTGGAGGATGCTA+AGG - chr8_1:66664899-66664918 Msa1208530:intron 55.0%
!! CTGCAGGAGTGCTTCAGTGA+AGG - chr8_1:66665082-66665101 Msa1208530:CDS 55.0%
! GGGTCTTGATGATCTGGCTC+TGG - chr8_1:66665153-66665172 Msa1208530:intron 55.0%
TGTGGAGCATGCACAGACCA+AGG - chr8_1:66665210-66665229 Msa1208530:intron 55.0%
GTGGAGCATGCACAGACCAA+GGG - chr8_1:66665211-66665230 Msa1208530:intron 55.0%
TGGAGCATGCACAGACCAAG+GGG - chr8_1:66665212-66665231 Msa1208530:intron 55.0%
TGATGGTAGAAGCCACCCCT+TGG + chr8_1:66665230-66665249 None:intergenic 55.0%
! TAGCTAGACATCTGGGGCAG+AGG + chr8_1:66665260-66665279 None:intergenic 55.0%
ATGGGAGGACAACATGCCCT+GGG + chr8_1:66665288-66665307 None:intergenic 55.0%
AATGGGAGGACAACATGCCC+TGG + chr8_1:66665289-66665308 None:intergenic 55.0%
! CCTGTCTTGGCTCGAGATCC+GGG - chr8_1:66661225-66661244 Msa1208530:three_prime_UTR 60.0%
! TGGGGAAATGGCGTCGAACG+AGG - chr8_1:66661606-66661625 Msa1208530:three_prime_UTR 60.0%
! GGGGAAATGGCGTCGAACGA+GGG - chr8_1:66661607-66661626 Msa1208530:three_prime_UTR 60.0%
GTCTGTGCCTTACCACCAGC+AGG + chr8_1:66661751-66661770 None:intergenic 60.0%
GGTGGTAAGGCACAGACTGC+TGG - chr8_1:66661754-66661773 Msa1208530:CDS 60.0%
! CATGTGCGTCGGTCGCATTC+TGG - chr8_1:66661790-66661809 Msa1208530:CDS 60.0%
! GTGGATGCAGATGGTGCTGG+TGG - chr8_1:66663053-66663072 Msa1208530:CDS 60.0%
!! GTGCTGGTGGTAAGGGCACT+TGG - chr8_1:66663066-66663085 Msa1208530:CDS 60.0%
!! GCTGGTGGTAAGGGCACTTG+GGG - chr8_1:66663068-66663087 Msa1208530:CDS 60.0%
!! CTGGTGGTAAGGGCACTTGG+GGG - chr8_1:66663069-66663088 Msa1208530:CDS 60.0%
GGGCACTTGGGGGAAATTGC+TGG - chr8_1:66663079-66663098 Msa1208530:CDS 60.0%
TTGGAGGGGAGGGGATTGGA+GGG + chr8_1:66663323-66663342 None:intergenic 60.0%
ATTGGAGGGGAGGGGATTGG+AGG + chr8_1:66663324-66663343 None:intergenic 60.0%
CTTGCCCTGGCAAGAAAGGC+TGG + chr8_1:66663871-66663890 None:intergenic 60.0%
CAGCCTTTCTTGCCAGGGCA+AGG - chr8_1:66663869-66663888 Msa1208530:intron 60.0%
CAGGGCAAGGAAGGCTCTTC+CGG - chr8_1:66663882-66663901 Msa1208530:intron 60.0%
CGAGGTTGTGAAGAAGGCCC+TGG - chr8_1:66664128-66664147 Msa1208530:intron 60.0%
GAAGGCCCTGGTACTTGCCA+TGG - chr8_1:66664140-66664159 Msa1208530:intron 60.0%
GGCTATTGAGATGCTGGGGC+GGG - chr8_1:66664868-66664887 Msa1208530:intron 60.0%
GCTATTGAGATGCTGGGGCG+GGG - chr8_1:66664869-66664888 Msa1208530:intron 60.0%
CTATTGAGATGCTGGGGCGG+GGG - chr8_1:66664870-66664889 Msa1208530:intron 60.0%
AGCATGCACAGACCAAGGGG+TGG - chr8_1:66665215-66665234 Msa1208530:intron 60.0%
CCCGGATCTCGAGCCAAGAC+AGG + chr8_1:66661228-66661247 None:intergenic 65.0%
TGGAGGGGAGGGGATTGGAG+GGG + chr8_1:66663322-66663341 None:intergenic 65.0%
GCCCTGGCAAGAAAGGCTGG+TGG + chr8_1:66663868-66663887 None:intergenic 65.0%
CGGAAGAGCCTTCCTTGCCC+TGG + chr8_1:66663884-66663903 None:intergenic 65.0%
!! GGGAACTGGATGGGCTGTGG+AGG - chr8_1:66664890-66664909 Msa1208530:intron 65.0%
GGGAGGGGATTGGAGGGGAG+GGG + chr8_1:66663317-66663336 None:intergenic 70.0%
GGGGAGGGGATTGGAGGGGA+GGG + chr8_1:66663318-66663337 None:intergenic 70.0%
AGGGGAGGGGATTGGAGGGG+AGG + chr8_1:66663319-66663338 None:intergenic 70.0%
AGATGCTGGGGCGGGGGAAC+TGG - chr8_1:66664876-66664895 Msa1208530:intron 70.0%
CTGGGGCGGGGGAACTGGAT+GGG - chr8_1:66664881-66664900 Msa1208530:intron 70.0%
!! CGGGGGAACTGGATGGGCTG+TGG - chr8_1:66664887-66664906 Msa1208530:intron 70.0%
GCTGGGGCGGGGGAACTGGA+TGG - chr8_1:66664880-66664899 Msa1208530:intron 75.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 66661075 66665673 66661075 ID=Msa1208530;Name=Msa1208530
chr8_1 mRNA 66661075 66665673 66661075 ID=Msa1208530-mRNA-1;Parent=Msa1208530;Name=Msa1208530-mRNA-1;_AED=0.00;_eAED=0.00;_QI=250|1|1|1|0.66|0.5|4|648|619
chr8_1 exon 66661075 66663264 66661075 ID=Msa1208530-mRNA-1:exon:21930;Parent=Msa1208530-mRNA-1
chr8_1 exon 66663591 66663685 66663591 ID=Msa1208530-mRNA-1:exon:21929;Parent=Msa1208530-mRNA-1
chr8_1 exon 66664913 66665166 66664913 ID=Msa1208530-mRNA-1:exon:21928;Parent=Msa1208530-mRNA-1
chr8_1 exon 66665455 66665673 66665455 ID=Msa1208530-mRNA-1:exon:21927;Parent=Msa1208530-mRNA-1
chr8_1 five_prime_UTR 66665455 66665673 66665455 ID=Msa1208530-mRNA-1:five_prime_utr;Parent=Msa1208530-mRNA-1
chr8_1 five_prime_UTR 66665136 66665166 66665136 ID=Msa1208530-mRNA-1:five_prime_utr;Parent=Msa1208530-mRNA-1
chr8_1 CDS 66664913 66665135 66664913 ID=Msa1208530-mRNA-1:cds;Parent=Msa1208530-mRNA-1
chr8_1 CDS 66663591 66663685 66663591 ID=Msa1208530-mRNA-1:cds;Parent=Msa1208530-mRNA-1
chr8_1 CDS 66661723 66663264 66661723 ID=Msa1208530-mRNA-1:cds;Parent=Msa1208530-mRNA-1
chr8_1 three_prime_UTR 66661075 66661722 66661075 ID=Msa1208530-mRNA-1:three_prime_utr;Parent=Msa1208530-mRNA-1
Gene Sequence

>Msa1208530

ATGGCGTCGAACGAGGGATTTTTGACTGAAGGACAGAGGGAGATGTTGAAAATTGCGAGTCAGAACGCTGAGAATTTGTCGTCGTCGCCTAAGTCGCCGTCGACATTGCTTGCTGATCATCATCACATCAAAGCTCCTGCTGGTGGTAAGGCACAGACTGCTGGGATTGCTGTGAGGCATGTGCGTCGGTCGCATTCTGGAAAGTTAGGGCGGGCTAAGAAGGATGGTGCTGGTGGTAAGGGCACTTGGGGGAAATTGCTGGACACAGAAATTGATTCTCACATAGACCGCAATGATCCAAATTATGATAGTGGCGAGGAACCCTATGAGCTGGTTGGAACTACTGTTACTGACCCCTTGGATGAATTCAAGAAAGCAGTGGTATCCCTCATAGATGAATACTTCAGTAATGGGGATGTTGATTTGGCAGCATCTGACCTAAGAGAACTTGGCTCAAGTGAATATTATCCATACTTCATTAAGCGACTTGTTTCCATGGCAATGGACAGGCATGATAAGGAGAAAGAAATGGCTTCTGTTCTGCTTTCAGCACTGTATGCTGATGTCATTAGTCCCACACAGATTAGGGATGGATTTTTTATGCTTATTGAATCTGCTGATGATCTTGCAGTGGATATCCTGGATGCAGTTGACATCCTTGCTTTATTCCTGGCACGTGCTGTTGTTGATGATATTCTTCCACCAGCCTTTCTTGCCAGGGCAAGGAAGGCTCTTCCGGAATCTTCCAAGGGAGCTGAGGTAGTCAAGACTGCCGAGAAGAGCTATCTCTCAGCTCCACACCATGCAGAACTTGTGGAAAGACGATGGGGTGGTAGCACTCACATTACTGTTGAAGAAATGAAGAAAAAGATTGCTGATTTACTTAAAGAATATGTTGATAGTGGCGAGACACTTGAAGCCTGTAGGTGTATACGTGAGTTGGGAGTTGCATTCTTCCATCACGAGGTTGTGAAGAAGGCCCTGGTACTTGCCATGGAGATTCCTTCAGCAGAACCTTTACTGTTGAAGCTGTTAAAAGAAGCAGCAGCAGAAGGACTGATTAGTTCCAGCCAAATGGTGAAAGGGTTTTCTCGATTGGAAGAAGGCCTAGATGATCTTGCTCTTGATATTCCATCAGCTAAAGCCTTGTTTCAGTCATTTGTCCCCAAGGCAATATCTGAAGGATGGCTTGATGCTTCCTTTGCCAATCCAGCTGGTGAAAATGGGGAATTCCAAGTTGAAGATGAGAATGTGAGGAAGTACAAAAAGGAAGCTGTAACTATAATTCATGAGTATTTTCTCTCTGACGACATTCCTGAACTCATTCGAAGCCTAGAAGATCTTGGAGCACCTGAGTATAACCCAATATTTTTGAAGAGGTTAATAACACTTGCTTTGGACCGAAAGAACAGAGAAAAGGAAATGGCATCTGTCCTGCTATCTGCACTTCATATAGAGATATTCTCAACAGAGGATATTGTTAATGGTTTTGTCATGCTTCTGGAAAATGCTGAAGATACAACGCTGGATATACTGGATGCTTCGAATGAGCTTGCTCTGTTTTTAGCTCGGGCTGTGATTGATGATGTACTTGCCCCATTGAACTTGGATGAAATTGGCAGCAGACTACCACCAAAATGCAGTGGTAGTGAAACTGTGCGTATGGCTCGAACACTCTCTTCTGCTCGTCATGCAGGTGAAAGGCTATTGAGATGCTGGGGCGGGGGAACTGGATGGGCTGTGGAGGATGCTAAGGACAAGATCACAAAGCTCTTGGAGGAGTATGAAAGTGGGGGGTTGTCGGTGAAGCATGCCAGTGTATTCGTGACTTGGGGATGCCTTTCTTCAACCATGAGGTAG
Protein sequence

>Msa1208530

MASNEGFLTEGQREMLKIASQNAENLSSSPKSPSTLLADHHHIKAPAGGKAQTAGIAVRHVRRSHSGKLGRAKKDGAGGKGTWGKLLDTEIDSHIDRNDPNYDSGEEPYELVGTTVTDPLDEFKKAVVSLIDEYFSNGDVDLAASDLRELGSSEYYPYFIKRLVSMAMDRHDKEKEMASVLLSALYADVISPTQIRDGFFMLIESADDLAVDILDAVDILALFLARAVVDDILPPAFLARARKALPESSKGAEVVKTAEKSYLSAPHHAELVERRWGGSTHITVEEMKKKIADLLKEYVDSGETLEACRCIRELGVAFFHHEVVKKALVLAMEIPSAEPLLLKLLKEAAAEGLISSSQMVKGFSRLEEGLDDLALDIPSAKALFQSFVPKAISEGWLDASFANPAGENGEFQVEDENVRKYKKEAVTIIHEYFLSDDIPELIRSLEDLGAPEYNPIFLKRLITLALDRKNREKEMASVLLSALHIEIFSTEDIVNGFVMLLENAEDTTLDILDASNELALFLARAVIDDVLAPLNLDEIGSRLPPKCSGSETVRMARTLSSARHAGERLLRCWGGGTGWAVEDAKDKITKLLEEYESGGLSVKHASVFVTWGCLSSTMR*