AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1071420

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1071420 MtrunA17_Chr5g0395811 98.074 623 10 2 1 623 1 621 0.0 1245
Msa1071420 MtrunA17_Chr4g0039531 54.883 512 198 12 126 623 244 736 2.09e-158 472
Msa1071420 MtrunA17_Chr4g0039531 70.139 144 38 2 10 148 2 145 1.45e-56 204
Msa1071420 MtrunA17_Chr8g0341521 67.857 112 36 0 10 121 19 130 3.80e-41 159
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1071420 AT3G03140.1 36.862 529 277 20 125 609 243 758 1.00e-65 230
Msa1071420 AT3G03140.1 74.400 125 32 0 1 125 1 125 6.24e-56 202
Msa1071420 AT3G21295.3 63.158 114 42 0 8 121 11 124 7.93e-40 153
Msa1071420 AT3G21295.2 60.833 120 47 0 2 121 5 124 3.17e-39 153
Msa1071420 AT3G21295.1 63.158 114 42 0 8 121 11 124 3.22e-39 153
Msa1071420 AT1G51745.1 54.098 122 54 1 2 123 5 124 3.61e-33 135

Find 215 sgRNAs with CRISPR-Local

Find 495 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCATTCTCTTGTGGTTTAAA+TGG 0.164129 7_2:-67935776 None:intergenic
TAACAGAGATTGGTATAATT+TGG 0.169000 7_2:+67931278 Msa1071420:intron
CACAAAATTTCAATCAGATT+TGG 0.200228 7_2:-67930246 None:intergenic
ACAAAATTTCAATCAGATTT+GGG 0.249464 7_2:-67930245 None:intergenic
TTGCAACCTCTCTAGGAGTT+AGG 0.253177 7_2:-67935884 None:intergenic
CAATAGGGACTGACTCTTTC+GGG 0.255657 7_2:-67936073 None:intergenic
AATGGATATAAGAGATTAAA+TGG 0.257606 7_2:+67936353 Msa1071420:CDS
TGGAACTCCGGTTAAGCTTC+TGG 0.266144 7_2:+67930547 Msa1071420:CDS
ATTATTTCTTTCCTGATCTA+AGG 0.266623 7_2:-67936333 None:intergenic
TCTTCTGTTTATCAGTCTTC+AGG 0.275069 7_2:-67936891 None:intergenic
GCGCCGTTGGATCCCTTGTT+TGG 0.280360 7_2:+67930438 Msa1071420:CDS
TGCTTTCAGTAGTGTGGATT+AGG 0.289825 7_2:-67930270 None:intergenic
CGCCGTTGGATCCCTTGTTT+GGG 0.307336 7_2:+67930439 Msa1071420:CDS
CTACTAAATACCAGTTTAAC+TGG 0.311660 7_2:-67936629 None:intergenic
GATTACTTGAGAAGATTAAT+AGG 0.314220 7_2:+67936651 Msa1071420:CDS
CTAAGGAAACAAGATAAATT+AGG 0.318396 7_2:+67931456 Msa1071420:CDS
TTAGATGGGAGTTCTATAAT+TGG 0.320462 7_2:+67936113 Msa1071420:CDS
TATCAGTCTTCAGGATGAAT+TGG 0.320732 7_2:-67936882 None:intergenic
GAGATGGATGGGGAGGGTTT+AGG 0.322136 7_2:+67930404 Msa1071420:exon
GCCTGCTTTGAAAGAATATT+CGG 0.324033 7_2:+67935950 Msa1071420:CDS
CAACTTGGGGAGTATGCTTA+TGG 0.325361 7_2:+67932438 Msa1071420:CDS
GTATCCAAATGGCAATTAAA+AGG 0.330224 7_2:+67935657 Msa1071420:CDS
TAGAAGGACCGGTTTGGATT+TGG 0.333856 7_2:-67930156 None:intergenic
ACCACGACCCGTTTCTTCTT+CGG 0.334820 7_2:-67930463 None:intergenic
GTCAAACAAGTTCTCAGTTT+CGG 0.347282 7_2:-67937154 None:intergenic
ATCAGTCTTCAGGATGAATT+GGG 0.353757 7_2:-67936881 None:intergenic
ATAACCGTAACCTTGTAAAA+AGG 0.356178 7_2:+67935688 Msa1071420:CDS
TGAAACTGCTTCTATTAAAT+CGG 0.357173 7_2:+67932521 Msa1071420:CDS
CCAATATCATCTTCCCAACT+TGG 0.357429 7_2:+67932423 Msa1071420:CDS
TTAGATCAGGAAAGAAATAA+TGG 0.359142 7_2:+67936335 Msa1071420:CDS
CCAAGTTGGGAAGATGATAT+TGG 0.359457 7_2:-67932423 None:intergenic
AAAATATGAGCAATTTAAGT+TGG 0.363830 7_2:+67937089 Msa1071420:three_prime_UTR
TGAAGTTTGAATCTTCTAGA+AGG 0.364578 7_2:-67930172 None:intergenic
CCATCCTTAAGGACTTCAAT+TGG 0.381058 7_2:-67936146 None:intergenic
TTGCTCGTAATAGATACAAT+AGG 0.381680 7_2:-67936089 None:intergenic
TGCAACCTCTCTAGGAGTTA+GGG 0.381710 7_2:-67935883 None:intergenic
GGGAGGGGAGGAGATGGATG+GGG 0.386941 7_2:+67930394 Msa1071420:exon
TTCGAGGTTCCCGCGGATAA+AGG 0.387198 7_2:-67935620 None:intergenic
GCATCTGCCTTTCAAGCTCC+AGG 0.391605 7_2:-67931434 None:intergenic
ATGACTAAACCAGAGGTCTC+TGG 0.391626 7_2:+67936584 Msa1071420:CDS
ACAATAGGGACTGACTCTTT+CGG 0.391982 7_2:-67936074 None:intergenic
AATCGTATTTAATTGATTGT+TGG 0.393488 7_2:+67936829 Msa1071420:three_prime_UTR
TCTCTTCCCAGAAGCTTAAC+CGG 0.395300 7_2:-67930554 None:intergenic
AAATATGAGCAATTTAAGTT+GGG 0.398243 7_2:+67937090 Msa1071420:three_prime_UTR
GCGGAGGGGAGGGGAGGAGA+TGG 0.399238 7_2:+67930388 Msa1071420:exon
AAGAAACGGGTCGTGGTGGC+CGG 0.399939 7_2:+67930469 Msa1071420:CDS
TTATCTATTGAAGATAATCT+TGG 0.404235 7_2:+67936518 Msa1071420:CDS
GATGACAGCGATCAAATGTT+TGG 0.412210 7_2:+67935843 Msa1071420:CDS
AGGGGAGGGGAGGAGATGGA+TGG 0.415178 7_2:+67930392 Msa1071420:exon
TCTGAACGGCTTCACTCGCT+TGG 0.416919 7_2:-67931307 None:intergenic
TGAGAAGCGGCAAGGTCATC+AGG 0.419003 7_2:-67930506 None:intergenic
ACCGTATCAATTCATCAAGC+TGG 0.421376 7_2:+67930346 Msa1071420:five_prime_UTR
AGGGGAGGAGATGGATGGGG+AGG 0.421381 7_2:+67930397 Msa1071420:exon
AAAAGTTAAGCGGAGGGGAG+GGG 0.422206 7_2:+67930379 Msa1071420:five_prime_UTR
CACATTTGCTCCTCTTTGCT+CGG 0.423627 7_2:-67932341 None:intergenic
TCTATTACGAGCAAGTTAGA+TGG 0.426232 7_2:+67936098 Msa1071420:CDS
TAAGGACTTCAATTGGGATT+GGG 0.426606 7_2:-67936139 None:intergenic
GGGGAGGGGAGGAGATGGAT+GGG 0.427742 7_2:+67930393 Msa1071420:exon
GCTTTCAGTAGTGTGGATTA+GGG 0.428399 7_2:-67930269 None:intergenic
CATCTGACCTCACCTCGATC+TGG 0.430909 7_2:+67930527 Msa1071420:CDS
AGCTTGCATACCAGTTAAAC+TGG 0.431814 7_2:+67936619 Msa1071420:CDS
TTGACGGCCCGGCATTGTTA+AGG 0.432666 7_2:-67936418 None:intergenic
TGAAAGGGCGGAGACAGCTC+TGG 0.433854 7_2:+67931353 Msa1071420:CDS
ATCTTCTAGAAGGACCGGTT+TGG 0.434842 7_2:-67930162 None:intergenic
AACATTTGATCGCTGTCATC+AGG 0.436781 7_2:-67935840 None:intergenic
TTCAATAGATAAAGAGGAAA+GGG 0.436850 7_2:-67936507 None:intergenic
GCCTGAGTCTAGTGATTCTC+TGG 0.439209 7_2:+67932374 Msa1071420:CDS
AAGGACTTCTTGTCAATTGA+CGG 0.439535 7_2:-67936434 None:intergenic
AGATGTAGACTTGAAGGTTC+AGG 0.441230 7_2:+67936043 Msa1071420:CDS
CATTTAAACCACAAGAGAAT+GGG 0.443241 7_2:+67935777 Msa1071420:CDS
TTAAGGACTTCAATTGGGAT+TGG 0.443487 7_2:-67936140 None:intergenic
GGAACTCCGGTTAAGCTTCT+GGG 0.446719 7_2:+67930548 Msa1071420:CDS
AGCTCTATTTGATGATTGAT+AGG 0.450091 7_2:+67937018 Msa1071420:three_prime_UTR
AATCCCAATTGAAGTCCTTA+AGG 0.453310 7_2:+67936142 Msa1071420:CDS
CTATAGTCATTTCTGTAGTA+AGG 0.453653 7_2:-67935810 None:intergenic
GCCTTTCAAGCTCCAGGGCG+TGG 0.453849 7_2:-67931428 None:intergenic
GCTGGTAGATGTAGACTTGA+AGG 0.453903 7_2:+67936037 Msa1071420:CDS
ATTATCTTCAATAGATAAAG+AGG 0.455659 7_2:-67936513 None:intergenic
AGCTGTCTCCGCCCTTTCAA+TGG 0.456193 7_2:-67931349 None:intergenic
CATCCTTAAGGACTTCAATT+GGG 0.457744 7_2:-67936145 None:intergenic
AGTGATCCTTATCATTATGA+TGG 0.463734 7_2:+67935999 Msa1071420:CDS
CCATTTAAACCACAAGAGAA+TGG 0.464770 7_2:+67935776 Msa1071420:CDS
AAATACGATTTCTATTTCGT+TGG 0.469150 7_2:-67936816 None:intergenic
GGTCTGTTGCTGCTTCTGAT+AGG 0.470300 7_2:+67935709 Msa1071420:CDS
TGTCAGTTGAGCCATCCTTA+AGG 0.470737 7_2:-67936157 None:intergenic
CAATATCATCTTCCCAACTT+GGG 0.470747 7_2:+67932424 Msa1071420:CDS
TGAAGACTTCTCCTTAGATC+AGG 0.472242 7_2:+67936322 Msa1071420:CDS
TCCGAATATTCTTTCAAAGC+AGG 0.474772 7_2:-67935951 None:intergenic
GGTGCAGAGGATTGCGCCGT+TGG 0.476058 7_2:+67930425 Msa1071420:CDS
GTTTGGGTCCGAAGAAGAAA+CGG 0.476480 7_2:+67930455 Msa1071420:CDS
AATTTGATGCATCCATTGAA+AGG 0.477697 7_2:+67931337 Msa1071420:CDS
CAACATTTGATGACGATATG+TGG 0.479561 7_2:-67936298 None:intergenic
CATAAGCATACTCCCCAAGT+TGG 0.481163 7_2:-67932437 None:intergenic
TTTGGGTCCGAAGAAGAAAC+GGG 0.485259 7_2:+67930456 Msa1071420:CDS
TGCTCGTAATAGATACAATA+GGG 0.488620 7_2:-67936088 None:intergenic
TGTAACCAATCCTAGTTGTA+AGG 0.489542 7_2:-67930073 None:intergenic
AGTTAAGCGGAGGGGAGGGG+AGG 0.491607 7_2:+67930382 Msa1071420:five_prime_UTR
TAATAATTATCTTGCAGTGA+TGG 0.493971 7_2:+67936766 Msa1071420:three_prime_UTR
TTTGAATCTTCTAGAAGGAC+CGG 0.496692 7_2:-67930167 None:intergenic
CTCCTCGCAGTCCTCCAAGC+TGG 0.497373 7_2:-67936248 None:intergenic
GTGATGGCACAACAAATTGC+TGG 0.497763 7_2:+67936782 Msa1071420:three_prime_UTR
ATCATTAACCAAATCCAAAC+CGG 0.498808 7_2:+67930148 Msa1071420:five_prime_UTR
AGAAACGGGTCGTGGTGGCC+GGG 0.499873 7_2:+67930470 Msa1071420:CDS
CCGTATCAATTCATCAAGCT+GGG 0.506076 7_2:+67930347 Msa1071420:five_prime_UTR
GTGATCCTTATCATTATGAT+GGG 0.506423 7_2:+67936000 Msa1071420:CDS
TAAGGCCGTTCTTCTTCCAA+TGG 0.508139 7_2:-67936400 None:intergenic
AACCAGGCCCCATTCTCTTG+TGG 0.510552 7_2:-67935785 None:intergenic
GGCGCAACCGCCGCCGGTGA+AGG 0.510950 7_2:-67930323 None:intergenic
ATAAGCATACTCCCCAAGTT+GGG 0.516000 7_2:-67932436 None:intergenic
CCAATGGCTTGCATTATGAC+TGG 0.516730 7_2:-67936384 None:intergenic
TCCACGCCCTGGAGCTTGAA+AGG 0.516755 7_2:+67931427 Msa1071420:CDS
TACGGTGGCGCAACCGCCGC+CGG 0.516951 7_2:-67930329 None:intergenic
AACATTTGATGACGATATGT+GGG 0.517456 7_2:-67936297 None:intergenic
AAGGTCTTGATTGGGATGAA+TGG 0.518276 7_2:+67935913 Msa1071420:CDS
CGGTGTAGAGCATACAAGTA+GGG 0.521947 7_2:-67937134 None:intergenic
ACAGCTTCATTGCACGTTCG+AGG 0.523686 7_2:-67935636 None:intergenic
AGAACGGCCTTAACAATGCC+GGG 0.524186 7_2:+67936411 Msa1071420:CDS
AGCTTGAAAGGCAGATGCTA+AGG 0.525873 7_2:+67931439 Msa1071420:CDS
ATTTGATGCATCCATTGAAA+GGG 0.526659 7_2:+67931338 Msa1071420:CDS
CAAAATTTCAATCAGATTTG+GGG 0.526980 7_2:-67930244 None:intergenic
TTATATGGAGCAGATATTGA+AGG 0.527413 7_2:+67935744 Msa1071420:CDS
TTCTTCTTCGGACCCAAACA+AGG 0.527567 7_2:-67930451 None:intergenic
TGACTAAACCAGAGGTCTCT+GGG 0.528670 7_2:+67936585 Msa1071420:CDS
CTCACCTCGATCTGGAACTC+CGG 0.529139 7_2:+67930535 Msa1071420:CDS
AATATGAGCAATTTAAGTTG+GGG 0.532478 7_2:+67937091 Msa1071420:three_prime_UTR
TTGATTGGGATGAATGGCCG+TGG 0.533085 7_2:+67935919 Msa1071420:CDS
AATGGCAATTAAAAGGAAAG+AGG 0.536424 7_2:+67935664 Msa1071420:CDS
CTCGCAGTCCTCCAAGCTGG+TGG 0.539878 7_2:-67936245 None:intergenic
AAGAACGGCCTTAACAATGC+CGG 0.541891 7_2:+67936410 Msa1071420:CDS
CCCAGCTTGATGAATTGATA+CGG 0.542016 7_2:-67930347 None:intergenic
ATAAAGGTGAGGCATGTCAC+TGG 0.542681 7_2:-67935604 None:intergenic
GCAATGAAGCTGTATCCAAA+TGG 0.548001 7_2:+67935646 Msa1071420:CDS
CTTCTTGTCAATTGACGGCC+CGG 0.548257 7_2:-67936429 None:intergenic
GATGGCCACGGTAGTTGTCA+AGG 0.549940 7_2:-67930117 None:intergenic
AGATGCTATTCTCCACGCCC+TGG 0.550064 7_2:+67931416 Msa1071420:CDS
GGGGAGGAGATGGATGGGGA+GGG 0.553319 7_2:+67930398 Msa1071420:exon
CTATTACGAGCAAGTTAGAT+GGG 0.553342 7_2:+67936099 Msa1071420:CDS
GTAGTGAGCCCAGAGACCTC+TGG 0.554233 7_2:-67936593 None:intergenic
GGTTAATGATGTGGCGGAGA+TGG 0.554841 7_2:-67930135 None:intergenic
GTGTACTTCCACCAGCTTGG+AGG 0.555706 7_2:+67936237 Msa1071420:CDS
GTAGTGTACTTCCACCAGCT+TGG 0.557455 7_2:+67936234 Msa1071420:CDS
TGAAACTGCTTTCAGTAGTG+TGG 0.557725 7_2:-67930276 None:intergenic
GCATACAAGTAGGGGACAGA+GGG 0.558569 7_2:-67937125 None:intergenic
CCAGTCATAATGCAAGCCAT+TGG 0.558583 7_2:+67936384 Msa1071420:CDS
TTTGGATTTGGTTAATGATG+TGG 0.560550 7_2:-67930144 None:intergenic
CTTCAATAGATAAAGAGGAA+AGG 0.560576 7_2:-67936508 None:intergenic
TCCGAAGAAGAAACGGGTCG+TGG 0.563277 7_2:+67930462 Msa1071420:CDS
TAAAAGCTTCTAGTAAGTGA+TGG 0.563281 7_2:-67936548 None:intergenic
TTTAAAAGCATCTACTAATG+TGG 0.564522 7_2:+67936679 Msa1071420:CDS
AACCACAAGAGAATGGGGCC+TGG 0.572020 7_2:+67935783 Msa1071420:CDS
TGGGGAGGGTTTAGGTGCAG+AGG 0.573698 7_2:+67930412 Msa1071420:CDS
AGCATACAAGTAGGGGACAG+AGG 0.575724 7_2:-67937126 None:intergenic
AAAATTTCAATCAGATTTGG+GGG 0.577680 7_2:-67930243 None:intergenic
TTATGGAAGTTCATTTGCTG+AGG 0.579123 7_2:+67932455 Msa1071420:CDS
TCGGTGTAGAGCATACAAGT+AGG 0.585711 7_2:-67937135 None:intergenic
AATGTGGATGTGTTGAATCC+CGG 0.586904 7_2:+67936695 Msa1071420:CDS
TGTGAGAATTCTACACTACA+AGG 0.589547 7_2:-67936934 None:intergenic
AATATCATCTTCCCAACTTG+GGG 0.592578 7_2:+67932425 Msa1071420:CDS
CATGCCTCACCTTTATCCGC+GGG 0.593895 7_2:+67935611 Msa1071420:CDS
GAAAGGGCGGAGACAGCTCT+GGG 0.594889 7_2:+67931354 Msa1071420:CDS
AACTGCAGAAACTGGTGATG+AGG 0.595711 7_2:+67935518 Msa1071420:intron
CGAGTGAAGCCGTTCAGATG+CGG 0.598434 7_2:+67931312 Msa1071420:CDS
CCAATTGAAGTCCTTAAGGA+TGG 0.599661 7_2:+67936146 Msa1071420:CDS
GATGACGATATGTGGGGACG+AGG 0.600202 7_2:-67936290 None:intergenic
CATCTGCCTTTCAAGCTCCA+GGG 0.601453 7_2:-67931433 None:intergenic
GGGAAGATGATATTGGAACA+TGG 0.604182 7_2:-67932416 None:intergenic
TCAAATTCGCCGCATCTGAA+CGG 0.607632 7_2:-67931321 None:intergenic
GGAAGATGATATTGGAACAT+GGG 0.607866 7_2:-67932415 None:intergenic
GACCCAAACAAGGGATCCAA+CGG 0.608724 7_2:-67930441 None:intergenic
TGATGTGGCGGAGATGGCCA+CGG 0.610939 7_2:-67930129 None:intergenic
GACTTCAGTAATGATATGAC+TGG 0.614342 7_2:+67936200 Msa1071420:CDS
GCAAGCCATTGGAAGAAGAA+CGG 0.617037 7_2:+67936395 Msa1071420:CDS
ATCCTTATCATTATGATGGG+GGG 0.621541 7_2:+67936003 Msa1071420:CDS
TGATGCATCCATTGAAAGGG+CGG 0.623713 7_2:+67931341 Msa1071420:CDS
TTGGGATGAATGGCCGTGGG+AGG 0.625534 7_2:+67935923 Msa1071420:CDS
GATCCTTATCATTATGATGG+GGG 0.627693 7_2:+67936002 Msa1071420:CDS
TCCAGAGAATCACTAGACTC+AGG 0.629818 7_2:-67932375 None:intergenic
TTGCACGTTCGAGGTTCCCG+CGG 0.629874 7_2:-67935627 None:intergenic
TGATTGGGATGAATGGCCGT+GGG 0.629990 7_2:+67935920 Msa1071420:CDS
TGATCCTTATCATTATGATG+GGG 0.631936 7_2:+67936001 Msa1071420:CDS
TTTCTGTAGTAAGGATAACC+AGG 0.632972 7_2:-67935801 None:intergenic
CGGTGAAGGAAAACGATGAA+CGG 0.634035 7_2:-67930309 None:intergenic
TCTTCTTCGGACCCAAACAA+GGG 0.634856 7_2:-67930450 None:intergenic
ACATGCCTCACCTTTATCCG+CGG 0.634920 7_2:+67935610 Msa1071420:CDS
AAGTAGGGGACAGAGGGACG+AGG 0.635254 7_2:-67937119 None:intergenic
AGGTGAGGTCAGATGAGAAG+CGG 0.637403 7_2:-67930519 None:intergenic
CACCAGCTTGGAGGACTGCG+AGG 0.639410 7_2:+67936246 Msa1071420:CDS
ATGGCCACGGTAGTTGTCAA+GGG 0.641239 7_2:-67930116 None:intergenic
AGGTCAGATGAGAAGCGGCA+AGG 0.642030 7_2:-67930514 None:intergenic
AATGATATGACTGGCTACGA+GGG 0.643107 7_2:+67936209 Msa1071420:CDS
AAAGCAGGCTGATCCTCCCA+CGG 0.647660 7_2:-67935936 None:intergenic
CGGCGTGGAGAGAAAATCGT+AGG 0.648319 7_2:+67936715 Msa1071420:CDS
GGATTTGGTTAATGATGTGG+CGG 0.651298 7_2:-67930141 None:intergenic
GGATATAAGAGATTAAATGG+TGG 0.658972 7_2:+67936356 Msa1071420:CDS
GAAGAAGAAACGGGTCGTGG+TGG 0.659280 7_2:+67930465 Msa1071420:CDS
ATTTAAACCACAAGAGAATG+GGG 0.661307 7_2:+67935778 Msa1071420:CDS
AGCTTGATGAATTGATACGG+TGG 0.666136 7_2:-67930344 None:intergenic
GCGCAGCATTCCGAGCAAAG+AGG 0.666694 7_2:+67932331 Msa1071420:CDS
ATGACGATATGTGGGGACGA+GGG 0.668022 7_2:-67936289 None:intergenic
TCAGTCTTCAGGATGAATTG+GGG 0.668572 7_2:-67936880 None:intergenic
CGTATCAATTCATCAAGCTG+GGG 0.675897 7_2:+67930348 Msa1071420:five_prime_UTR
TAATGATATGACTGGCTACG+AGG 0.681096 7_2:+67936208 Msa1071420:CDS
GGTGTAGAGCATACAAGTAG+GGG 0.682526 7_2:-67937133 None:intergenic
CGGAGTTCCAGATCGAGGTG+AGG 0.682627 7_2:-67930534 None:intergenic
GGTTCCCGCGGATAAAGGTG+AGG 0.684975 7_2:-67935615 None:intergenic
ACAAGAAAGCACTAGCAGTG+AGG 0.686399 7_2:+67935551 Msa1071420:CDS
TCAGGATCGAGTATTTGACC+CGG 0.688455 7_2:-67930488 None:intergenic
ATACACCCTAACTCCTAGAG+AGG 0.691111 7_2:+67935878 Msa1071420:CDS
ACATTTGATGACGATATGTG+GGG 0.693273 7_2:-67936296 None:intergenic
AGAGAATCACTAGACTCAGG+CGG 0.696781 7_2:-67932372 None:intergenic
TTAACCGGAGTTCCAGATCG+AGG 0.712187 7_2:-67930539 None:intergenic
AGACAAGATGACTAAACCAG+AGG 0.726249 7_2:+67936577 Msa1071420:CDS
TGATAAACAGAAGATACATG+AGG 0.727731 7_2:+67936900 Msa1071420:three_prime_UTR
GCAACCCTTGACAACTACCG+TGG 0.734982 7_2:+67930112 Msa1071420:five_prime_UTR
GGATGTGTTGAATCCCGGCG+TGG 0.752904 7_2:+67936700 Msa1071420:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GAAATTTTAAGAAAAAAATT+AGG + chr7_2:67931546-67931565 Msa1071420:intron 10.0%
!!! ATTTTTGGAATATTTTTTTT+CGG - chr7_2:67934740-67934759 None:intergenic 10.0%
!! TTAAAAAATTTAAGAGTTTA+AGG + chr7_2:67934907-67934926 Msa1071420:intron 10.0%
!! TAAACAAAATTTATTTACAA+TGG + chr7_2:67934935-67934954 Msa1071420:intron 10.0%
!! AATTAACCAAAAATTAACAT+GGG - chr7_2:67930748-67930767 None:intergenic 15.0%
!! AAATTAACCAAAAATTAACA+TGG - chr7_2:67930749-67930768 None:intergenic 15.0%
!! AAAATATACAAACATAAACA+AGG - chr7_2:67930957-67930976 None:intergenic 15.0%
!! ATAATATTCGGTAAAATTAA+CGG - chr7_2:67931888-67931907 None:intergenic 15.0%
!! TCAAATTTACAATCTTTATA+AGG - chr7_2:67932805-67932824 None:intergenic 15.0%
!!! TTTTGCAATATTTATTGATA+AGG + chr7_2:67932939-67932958 Msa1071420:intron 15.0%
!!! ATCTATAAACTCTATTTTTA+GGG - chr7_2:67933009-67933028 None:intergenic 15.0%
!!! AATCTATAAACTCTATTTTT+AGG - chr7_2:67933010-67933029 None:intergenic 15.0%
!! ATGTATTACAAGTTAAAATA+AGG + chr7_2:67933698-67933717 Msa1071420:intron 15.0%
!! AAGCATAAATTAAACAAATT+TGG - chr7_2:67934656-67934675 None:intergenic 15.0%
!! AGATATAAGTAACAAAAATA+TGG - chr7_2:67934776-67934795 None:intergenic 15.0%
!! ACAAAATTTCAATCAGATTT+GGG - chr7_2:67930248-67930267 None:intergenic 20.0%
!! AAAACTGAATTTGAAGAAAA+GGG - chr7_2:67930599-67930618 None:intergenic 20.0%
!! AAAAACTGAATTTGAAGAAA+AGG - chr7_2:67930600-67930619 None:intergenic 20.0%
!!! ATTCAGTTTTTTTTTTGTTC+TGG + chr7_2:67930609-67930628 Msa1071420:intron 20.0%
!!! TTCAGTTTTTTTTTTGTTCT+GGG + chr7_2:67930610-67930629 Msa1071420:intron 20.0%
!! CATATAAACAACACAAATAA+GGG - chr7_2:67931136-67931155 None:intergenic 20.0%
!! ACATATAAACAACACAAATA+AGG - chr7_2:67931137-67931156 None:intergenic 20.0%
!!! GTATATTTTTTAACAGAGAT+TGG + chr7_2:67931268-67931287 Msa1071420:intron 20.0%
!! AGTATTATACAATCCAAAAT+TGG - chr7_2:67931499-67931518 None:intergenic 20.0%
!! ATTGTATAATACTATTGAGA+AGG + chr7_2:67931506-67931525 Msa1071420:intron 20.0%
!! TTGTATAATACTATTGAGAA+GGG + chr7_2:67931507-67931526 Msa1071420:intron 20.0%
!!! ATGACTAAAAAAAACTTGTT+TGG + chr7_2:67931672-67931691 Msa1071420:intron 20.0%
!!! TTTTTCAATTAAGATTGCAA+GGG - chr7_2:67931805-67931824 None:intergenic 20.0%
!!! TTTTTTCAATTAAGATTGCA+AGG - chr7_2:67931806-67931825 None:intergenic 20.0%
!! CTGATTGAACTTATAATATT+CGG - chr7_2:67931900-67931919 None:intergenic 20.0%
!! GTGACTAATATTAAATAAAG+AGG + chr7_2:67932216-67932235 Msa1071420:intron 20.0%
!! ATTGTAAATTAGTGAAGATT+AGG + chr7_2:67932259-67932278 Msa1071420:intron 20.0%
!! AAGAAATAAAATGAAGTGTA+AGG - chr7_2:67932664-67932683 None:intergenic 20.0%
!! AGACTAGAAATAATCATAAA+CGG - chr7_2:67933251-67933270 None:intergenic 20.0%
!!! AACTTGTAATACATTTTGTT+TGG - chr7_2:67933692-67933711 None:intergenic 20.0%
!!! TATTATACTGTGTTTTCTAA+GGG - chr7_2:67933836-67933855 None:intergenic 20.0%
!!! ATATTATACTGTGTTTTCTA+AGG - chr7_2:67933837-67933856 None:intergenic 20.0%
!!! TTCAAATTGTCTAGAATATT+AGG - chr7_2:67933876-67933895 None:intergenic 20.0%
!!! TTCAAATTGTCTAGAATATT+AGG - chr7_2:67933876-67933895 None:intergenic 20.0%
!! CTATTAAATTAAGTCATGTA+AGG - chr7_2:67934251-67934270 None:intergenic 20.0%
!! CTTACATGACTTAATTTAAT+AGG + chr7_2:67934249-67934268 Msa1071420:intron 20.0%
!! TGATCTTTCATCAAAATTAT+TGG + chr7_2:67934311-67934330 Msa1071420:intron 20.0%
!!! ATACATCAAAGCAATTTTAT+TGG + chr7_2:67934396-67934415 Msa1071420:intron 20.0%
!!! TACATCAAAGCAATTTTATT+GGG + chr7_2:67934397-67934416 Msa1071420:intron 20.0%
!! AAGTACTATATGACAATTTA+AGG - chr7_2:67934506-67934525 None:intergenic 20.0%
!!! ATTGTCATATAGTACTTTTT+TGG + chr7_2:67934509-67934528 Msa1071420:intron 20.0%
!!! TTGTCATATAGTACTTTTTT+GGG + chr7_2:67934510-67934529 Msa1071420:intron 20.0%
!!! GTTTTTCAACAATTTTTTAC+AGG + chr7_2:67934686-67934705 Msa1071420:intron 20.0%
!! AATTCCTAACGATAAATTTA+TGG - chr7_2:67935050-67935069 None:intergenic 20.0%
!!! AAGTTAAATTGTTTTCGTAT+AGG - chr7_2:67935350-67935369 None:intergenic 20.0%
!!! AAAGAATATTCGGATTTTAA+AGG + chr7_2:67935960-67935979 Msa1071420:CDS 20.0%
!!! AAGAATATTCGGATTTTAAA+GGG + chr7_2:67935961-67935980 Msa1071420:CDS 20.0%
!! AATGGATATAAGAGATTAAA+TGG + chr7_2:67936353-67936372 Msa1071420:CDS 20.0%
!!! TTTTTTTGCACTCTTTTTAA+AGG - chr7_2:67936456-67936475 None:intergenic 20.0%
!! ATTATCTTCAATAGATAAAG+AGG - chr7_2:67936516-67936535 None:intergenic 20.0%
!! TTATCTATTGAAGATAATCT+TGG + chr7_2:67936518-67936537 Msa1071420:CDS 20.0%
!! AATCGTATTTAATTGATTGT+TGG + chr7_2:67936829-67936848 Msa1071420:three_prime_UTR 20.0%
!!! TATGCAAAAAGCATTATTAT+TGG + chr7_2:67936984-67937003 Msa1071420:three_prime_UTR 20.0%
!! AAAATATGAGCAATTTAAGT+TGG + chr7_2:67937089-67937108 Msa1071420:three_prime_UTR 20.0%
!!! AAATATGAGCAATTTAAGTT+GGG + chr7_2:67937090-67937109 Msa1071420:three_prime_UTR 20.0%
! AAAATTTCAATCAGATTTGG+GGG - chr7_2:67930246-67930265 None:intergenic 25.0%
! CAAAATTTCAATCAGATTTG+GGG - chr7_2:67930247-67930266 None:intergenic 25.0%
! CACAAAATTTCAATCAGATT+TGG - chr7_2:67930249-67930268 None:intergenic 25.0%
!! TATGAACCCATGTTAATTTT+TGG + chr7_2:67930739-67930758 Msa1071420:intron 25.0%
! TTGATAGATTTGAGCATATT+AGG + chr7_2:67930827-67930846 Msa1071420:intron 25.0%
! TGATAGATTTGAGCATATTA+GGG + chr7_2:67930828-67930847 Msa1071420:intron 25.0%
! AAAGTCAACAATCATTTCAT+TGG - chr7_2:67930879-67930898 None:intergenic 25.0%
! ATAATAGACAACACAAACAA+GGG - chr7_2:67931009-67931028 None:intergenic 25.0%
! AACATAAACAACACAAACAA+GGG - chr7_2:67931074-67931093 None:intergenic 25.0%
! AAATATACAGACACAAACAA+GGG - chr7_2:67931103-67931122 None:intergenic 25.0%
! AAAATATACAGACACAAACA+AGG - chr7_2:67931104-67931123 None:intergenic 25.0%
! TAACAGAGATTGGTATAATT+TGG + chr7_2:67931278-67931297 Msa1071420:intron 25.0%
!! TATTTCTCTCTTTTCTTCAA+TGG - chr7_2:67931384-67931403 None:intergenic 25.0%
! CTAAGGAAACAAGATAAATT+AGG + chr7_2:67931456-67931475 Msa1071420:CDS 25.0%
!! ATTGGAAAATAGACTTTTGT+AGG + chr7_2:67931602-67931621 Msa1071420:intron 25.0%
! ACTTATAAGCAAGATTATAG+CGG - chr7_2:67931939-67931958 None:intergenic 25.0%
!! CTTTGTTTGGTAAAAAATAG+TGG - chr7_2:67932055-67932074 None:intergenic 25.0%
! GAACATAACTTGGTATATTA+GGG - chr7_2:67932135-67932154 None:intergenic 25.0%
! AGAACATAACTTGGTATATT+AGG - chr7_2:67932136-67932155 None:intergenic 25.0%
! TGAAACTGCTTCTATTAAAT+CGG + chr7_2:67932521-67932540 Msa1071420:CDS 25.0%
! ATCAGAATTATTACCTAGAT+TGG + chr7_2:67932975-67932994 Msa1071420:intron 25.0%
! TATACATACATTACGTAAAC+AGG - chr7_2:67933053-67933072 None:intergenic 25.0%
!!! TTGGTTTTGGTTTTTATTAC+TGG - chr7_2:67933477-67933496 None:intergenic 25.0%
!! TTGTCTGCAATTAAAGTTTT+AGG + chr7_2:67933725-67933744 Msa1071420:intron 25.0%
!!! GTACTTATTTTCTCTCAAAA+AGG - chr7_2:67933793-67933812 None:intergenic 25.0%
!! AAATAATGTCAAGCTTTTCA+AGG - chr7_2:67933944-67933963 None:intergenic 25.0%
! AAGCTTGACATTATTTACAA+TGG + chr7_2:67933948-67933967 Msa1071420:intron 25.0%
! GTGAGTTTGTGTTATATATT+AGG - chr7_2:67934025-67934044 None:intergenic 25.0%
!! AAATAATGTCAAGCTTTTCA+AGG - chr7_2:67933944-67933963 None:intergenic 25.0%
! TTGATCTCTATTACATTGAT+AGG - chr7_2:67934173-67934192 None:intergenic 25.0%
! AAGTAAGAACTAAACTTACA+AGG - chr7_2:67934569-67934588 None:intergenic 25.0%
! AAACAAATTTGGATTGAGTA+AGG - chr7_2:67934645-67934664 None:intergenic 25.0%
! GTGTTAAGAACGTTATTAAA+AGG + chr7_2:67934710-67934729 Msa1071420:intron 25.0%
!!! TTTGGAATATTTTTTTTCGG+AGG - chr7_2:67934737-67934756 None:intergenic 25.0%
! TAAGATCTAAATGATGGTTA+AGG - chr7_2:67935131-67935150 None:intergenic 25.0%
!!! ACATTCTAAGATCTAAATGA+TGG - chr7_2:67935137-67935156 None:intergenic 25.0%
!! TCTTAGAATGTCTTACATTT+TGG + chr7_2:67935146-67935165 Msa1071420:intron 25.0%
!! CTTAGAATGTCTTACATTTT+GGG + chr7_2:67935147-67935166 Msa1071420:intron 25.0%
!! ATTATTTCTTTCCTGATCTA+AGG - chr7_2:67936336-67936355 None:intergenic 25.0%
! TTAGATCAGGAAAGAAATAA+TGG + chr7_2:67936335-67936354 Msa1071420:CDS 25.0%
! TTCAATAGATAAAGAGGAAA+GGG - chr7_2:67936510-67936529 None:intergenic 25.0%
! GATTACTTGAGAAGATTAAT+AGG + chr7_2:67936651-67936670 Msa1071420:CDS 25.0%
!! ACATTAGTAGATGCTTTTAA+AGG - chr7_2:67936680-67936699 None:intergenic 25.0%
!!! TTTAAAAGCATCTACTAATG+TGG + chr7_2:67936679-67936698 Msa1071420:CDS 25.0%
! TAATAATTATCTTGCAGTGA+TGG + chr7_2:67936766-67936785 Msa1071420:three_prime_UTR 25.0%
! AAATACGATTTCTATTTCGT+TGG - chr7_2:67936819-67936838 None:intergenic 25.0%
!! AATTGATTGTTGGTATTTTG+AGG + chr7_2:67936839-67936858 Msa1071420:three_prime_UTR 25.0%
!!! AATATGAGCAATTTAAGTTG+GGG + chr7_2:67937091-67937110 Msa1071420:three_prime_UTR 25.0%
! TTTGGATTTGGTTAATGATG+TGG - chr7_2:67930147-67930166 None:intergenic 30.0%
ATCATTAACCAAATCCAAAC+CGG + chr7_2:67930148-67930167 Msa1071420:five_prime_UTR 30.0%
TGAAGTTTGAATCTTCTAGA+AGG - chr7_2:67930175-67930194 None:intergenic 30.0%
TACGATATAAAGCCGAATTT+CGG - chr7_2:67930786-67930805 None:intergenic 30.0%
GATAGATTTGAGCATATTAG+GGG + chr7_2:67930829-67930848 Msa1071420:intron 30.0%
!!! TGATTGTTGACTTTTATGAG+TGG + chr7_2:67930885-67930904 Msa1071420:intron 30.0%
AGCATAAAGAACACAAACAA+GGG - chr7_2:67930927-67930946 None:intergenic 30.0%
CATAATAGACAACACAAACA+AGG - chr7_2:67931010-67931029 None:intergenic 30.0%
CAACATAAACAACACAAACA+AGG - chr7_2:67931075-67931094 None:intergenic 30.0%
TAATGAACCAACACAAACAA+GGG - chr7_2:67931167-67931186 None:intergenic 30.0%
ATAATGAACCAACACAAACA+AGG - chr7_2:67931168-67931187 None:intergenic 30.0%
!! TAATTTGCTCTTGTTTGTGT+TGG + chr7_2:67931246-67931265 Msa1071420:intron 30.0%
AATTTGATGCATCCATTGAA+AGG + chr7_2:67931337-67931356 Msa1071420:CDS 30.0%
ATTTGATGCATCCATTGAAA+GGG + chr7_2:67931338-67931357 Msa1071420:CDS 30.0%
! GCTTCTGATTAAACCAATTT+TGG + chr7_2:67931483-67931502 Msa1071420:intron 30.0%
AAACAAAATCACATGCAACA+TGG + chr7_2:67931573-67931592 Msa1071420:intron 30.0%
CATAAGTCAAAAGGCAAATT+AGG - chr7_2:67931992-67932011 None:intergenic 30.0%
! GTTTGGTAAAAAATAGTGGA+TGG - chr7_2:67932051-67932070 None:intergenic 30.0%
!!! TGTTTTGTTTTTCAGGATCT+GGG + chr7_2:67932301-67932320 Msa1071420:intron 30.0%
! GAAGACATGACTATATTTTC+AGG + chr7_2:67932579-67932598 Msa1071420:CDS 30.0%
CTTTATAAGGAAAAGAAGTG+AGG - chr7_2:67932792-67932811 None:intergenic 30.0%
TCATCAGAAGAGAGTAAATA+GGG - chr7_2:67932906-67932925 None:intergenic 30.0%
TTCATCAGAAGAGAGTAAAT+AGG - chr7_2:67932907-67932926 None:intergenic 30.0%
!!! ACTCTATTTTTAGGGTACAT+TGG - chr7_2:67933001-67933020 None:intergenic 30.0%
! ACGTAAACAGGATTTTACAA+AGG - chr7_2:67933041-67933060 None:intergenic 30.0%
CAAAAATGAAAGATGCACAA+TGG - chr7_2:67933201-67933220 None:intergenic 30.0%
! AACCCATAAATACTCCTTTT+AGG + chr7_2:67933435-67933454 Msa1071420:intron 30.0%
!! AGCCTAAAAGGAGTATTTAT+GGG - chr7_2:67933440-67933459 None:intergenic 30.0%
!! TAGCCTAAAAGGAGTATTTA+TGG - chr7_2:67933441-67933460 None:intergenic 30.0%
!! TTTTATTACTGGTGGTTTGT+AGG - chr7_2:67933466-67933485 None:intergenic 30.0%
!!! GTTTTGGTTTTTATTACTGG+TGG - chr7_2:67933474-67933493 None:intergenic 30.0%
!! TTAGTAGGGTACTTTAAGAT+TGG - chr7_2:67933496-67933515 None:intergenic 30.0%
!!! CTTGAAAGGAGTTTTTAGTA+GGG - chr7_2:67933510-67933529 None:intergenic 30.0%
!!! ACTTGAAAGGAGTTTTTAGT+AGG - chr7_2:67933511-67933530 None:intergenic 30.0%
TAATACCTTGTGAACTTGAA+AGG - chr7_2:67933524-67933543 None:intergenic 30.0%
AATCTTTCAAATCTTACACG+CGG + chr7_2:67933578-67933597 Msa1071420:intron 30.0%
TGTTCTAGTCAATGTATTAG+AGG + chr7_2:67933659-67933678 Msa1071420:intron 30.0%
TCTCAAAAAGGAAAGAAATC+TGG - chr7_2:67933781-67933800 None:intergenic 30.0%
GAAAATAAGTACATAGCTAG+AGG + chr7_2:67933801-67933820 Msa1071420:intron 30.0%
TACACATAGATTGTAGAGTT+GGG - chr7_2:67933991-67934010 None:intergenic 30.0%
TTACACATAGATTGTAGAGT+TGG - chr7_2:67933992-67934011 None:intergenic 30.0%
! ACTTGAAGGTGCATTAATAT+TGG + chr7_2:67934367-67934386 Msa1071420:intron 30.0%
TTATTGGGTATGATTCTTAG+AGG + chr7_2:67934412-67934431 Msa1071420:intron 30.0%
!!! GAGTGCAGAATTTTTTTGTA+GGG - chr7_2:67934613-67934632 None:intergenic 30.0%
!!! TGAGTGCAGAATTTTTTTGT+AGG - chr7_2:67934614-67934633 None:intergenic 30.0%
! GGACGTAGAAATCAAATTTT+TGG - chr7_2:67934755-67934774 None:intergenic 30.0%
! CAAGTTTAGAACACTATGAA+AGG - chr7_2:67934873-67934892 None:intergenic 30.0%
CACATATAGATTGTAGAGTT+GGG - chr7_2:67934978-67934997 None:intergenic 30.0%
CAACTCTACAATCTATATGT+GGG + chr7_2:67934977-67934996 Msa1071420:intron 30.0%
ATAGATTCGCATTACAAGTT+AGG - chr7_2:67935023-67935042 None:intergenic 30.0%
GTGACCATAAATTTATCGTT+AGG + chr7_2:67935043-67935062 Msa1071420:intron 30.0%
AGGAATAGATTATTGACATG+TGG - chr7_2:67935097-67935116 None:intergenic 30.0%
! ATTTTCATATGCTCTCCAAA+TGG + chr7_2:67935304-67935323 Msa1071420:intron 30.0%
AATGATGTGATACAGAACTA+AGG - chr7_2:67935470-67935489 None:intergenic 30.0%
!! AACTTTTTAACTGCAGAAAC+TGG + chr7_2:67935510-67935529 Msa1071420:intron 30.0%
GTATCCAAATGGCAATTAAA+AGG + chr7_2:67935657-67935676 Msa1071420:CDS 30.0%
!! CTTTCCTTTTAATTGCCATT+TGG - chr7_2:67935664-67935683 None:intergenic 30.0%
AATGGCAATTAAAAGGAAAG+AGG + chr7_2:67935664-67935683 Msa1071420:CDS 30.0%
ATAACCGTAACCTTGTAAAA+AGG + chr7_2:67935688-67935707 Msa1071420:CDS 30.0%
!! AGGAAAGACGTTGTTTTATA+TGG + chr7_2:67935729-67935748 Msa1071420:CDS 30.0%
TTATATGGAGCAGATATTGA+AGG + chr7_2:67935744-67935763 Msa1071420:CDS 30.0%
CATTTAAACCACAAGAGAAT+GGG + chr7_2:67935777-67935796 Msa1071420:CDS 30.0%
ATTTAAACCACAAGAGAATG+GGG + chr7_2:67935778-67935797 Msa1071420:CDS 30.0%
CTATAGTCATTTCTGTAGTA+AGG - chr7_2:67935813-67935832 None:intergenic 30.0%
AAAAAGTCAAGGTCTTGATT+GGG + chr7_2:67935905-67935924 Msa1071420:CDS 30.0%
AGTGATCCTTATCATTATGA+TGG + chr7_2:67935999-67936018 Msa1071420:CDS 30.0%
GTGATCCTTATCATTATGAT+GGG + chr7_2:67936000-67936019 Msa1071420:CDS 30.0%
TGATCCTTATCATTATGATG+GGG + chr7_2:67936001-67936020 Msa1071420:CDS 30.0%
TGCTCGTAATAGATACAATA+GGG - chr7_2:67936091-67936110 None:intergenic 30.0%
TTGCTCGTAATAGATACAAT+AGG - chr7_2:67936092-67936111 None:intergenic 30.0%
TTAGATGGGAGTTCTATAAT+TGG + chr7_2:67936113-67936132 Msa1071420:CDS 30.0%
!! AACATTTGATGACGATATGT+GGG - chr7_2:67936300-67936319 None:intergenic 30.0%
GGATATAAGAGATTAAATGG+TGG + chr7_2:67936356-67936375 Msa1071420:CDS 30.0%
CTTCAATAGATAAAGAGGAA+AGG - chr7_2:67936511-67936530 None:intergenic 30.0%
TAAAAGCTTCTAGTAAGTGA+TGG - chr7_2:67936551-67936570 None:intergenic 30.0%
CTACTAAATACCAGTTTAAC+TGG - chr7_2:67936632-67936651 None:intergenic 30.0%
!! TTAGTAGATGCTTTTAAAGG+TGG - chr7_2:67936677-67936696 None:intergenic 30.0%
TGATAAACAGAAGATACATG+AGG + chr7_2:67936900-67936919 Msa1071420:three_prime_UTR 30.0%
! AGCTCTATTTGATGATTGAT+AGG + chr7_2:67937018-67937037 Msa1071420:three_prime_UTR 30.0%
! ATTGCAGAAACTCAATTTTC+TGG + chr7_2:67937186-67937205 Msa1071420:three_prime_UTR 30.0%
! TTTGAATCTTCTAGAAGGAC+CGG - chr7_2:67930170-67930189 None:intergenic 35.0%
! TGGGGGAATTGAATTTTCTA+GGG - chr7_2:67930229-67930248 None:intergenic 35.0%
! TTGGGGGAATTGAATTTTCT+AGG - chr7_2:67930230-67930249 None:intergenic 35.0%
GGAAGCGAAAAAAAGTTAAG+CGG + chr7_2:67930369-67930388 Msa1071420:five_prime_UTR 35.0%
CAGCATAAAGAACACAAACA+AGG - chr7_2:67930928-67930947 None:intergenic 35.0%
! TTGCCCTTGTTTATGTTGAT+TGG + chr7_2:67930983-67931002 Msa1071420:intron 35.0%
CATGCAACATGGCAATATAT+TGG + chr7_2:67931584-67931603 Msa1071420:intron 35.0%
! AATAGACTTTTGTAGGACTG+TGG + chr7_2:67931609-67931628 Msa1071420:intron 35.0%
! ATAGACTTTTGTAGGACTGT+GGG + chr7_2:67931610-67931629 Msa1071420:intron 35.0%
AGGAGTCTGGTAAAATATAG+CGG - chr7_2:67931972-67931991 None:intergenic 35.0%
GGATAAGCTCATAAGTCAAA+AGG - chr7_2:67932001-67932020 None:intergenic 35.0%
! AGCTAGCTTATTGCTAAGAA+CGG - chr7_2:67932022-67932041 None:intergenic 35.0%
AGAAGTCCAAAGGCAAATTA+GGG - chr7_2:67932078-67932097 None:intergenic 35.0%
!! TAGGGCTTTGAATCATAAGA+AGG - chr7_2:67932117-67932136 None:intergenic 35.0%
CCTAAGTGAAGAACATAACT+TGG - chr7_2:67932145-67932164 None:intergenic 35.0%
CCAAGTTATGTTCTTCACTT+AGG + chr7_2:67932142-67932161 Msa1071420:intron 35.0%
AGTACAGTCGAAGTTATCTT+TGG + chr7_2:67932166-67932185 Msa1071420:intron 35.0%
!!! GTGTTTTGTTTTTCAGGATC+TGG + chr7_2:67932300-67932319 Msa1071420:intron 35.0%
GGAAGATGATATTGGAACAT+GGG - chr7_2:67932418-67932437 None:intergenic 35.0%
CAATATCATCTTCCCAACTT+GGG + chr7_2:67932424-67932443 Msa1071420:CDS 35.0%
AATATCATCTTCCCAACTTG+GGG + chr7_2:67932425-67932444 Msa1071420:CDS 35.0%
! TTATGGAAGTTCATTTGCTG+AGG + chr7_2:67932455-67932474 Msa1071420:CDS 35.0%
TACTTTCCTTGAGCTTACAT+CGG + chr7_2:67932616-67932635 Msa1071420:intron 35.0%
AATAAACCGATGTAAGCTCA+AGG - chr7_2:67932625-67932644 None:intergenic 35.0%
ATTCGTACAATAGTGCAACA+AGG - chr7_2:67932709-67932728 None:intergenic 35.0%
!! GTATCAGATGTGATTTGCTA+AGG + chr7_2:67933120-67933139 Msa1071420:intron 35.0%
TGTTCTCAGTCTAATGTCTT+GGG - chr7_2:67933146-67933165 None:intergenic 35.0%
TTGTTCTCAGTCTAATGTCT+TGG - chr7_2:67933147-67933166 None:intergenic 35.0%
AGACATTAGACTGAGAACAA+AGG + chr7_2:67933147-67933166 Msa1071420:intron 35.0%
GTTTGTAGGTTTAGCCTAAA+AGG - chr7_2:67933452-67933471 None:intergenic 35.0%
!!! GGGTACTTTAAGATTGGTTT+TGG - chr7_2:67933490-67933509 None:intergenic 35.0%
!! AAACTCCTTTCAAGTTCACA+AGG + chr7_2:67933516-67933535 Msa1071420:intron 35.0%
! TCAAGTTCACAAGGTATTAC+AGG + chr7_2:67933525-67933544 Msa1071420:intron 35.0%
!! TTTTAGGTAACAAAGTTGCG+TGG + chr7_2:67933741-67933760 Msa1071420:intron 35.0%
! TCAAGTTGTTTGTGTGGAAT+TGG - chr7_2:67934353-67934372 None:intergenic 35.0%
ATTCCACACAAACAACTTGA+AGG + chr7_2:67934353-67934372 Msa1071420:intron 35.0%
AAGGTGCATTAATATTGGTG+AGG + chr7_2:67934372-67934391 Msa1071420:intron 35.0%
AGCGAGTGAAATACTATATG+TGG + chr7_2:67934445-67934464 Msa1071420:intron 35.0%
! TACAAGGTCGCAATTTTGTA+GGG - chr7_2:67934553-67934572 None:intergenic 35.0%
! TTACAAGGTCGCAATTTTGT+AGG - chr7_2:67934554-67934573 None:intergenic 35.0%
CCACATATAGATTGTAGAGT+TGG - chr7_2:67934979-67934998 None:intergenic 35.0%
CCAACTCTACAATCTATATG+TGG + chr7_2:67934976-67934995 Msa1071420:intron 35.0%
TGTGGGTCTGAATTCATATA+TGG + chr7_2:67934994-67935013 Msa1071420:intron 35.0%
AAATGATGGTTAAGGTGAGA+GGG - chr7_2:67935123-67935142 None:intergenic 35.0%
TAAATGATGGTTAAGGTGAG+AGG - chr7_2:67935124-67935143 None:intergenic 35.0%
!! ACTGCTTAGATTGACTTGTT+TGG + chr7_2:67935232-67935251 Msa1071420:intron 35.0%
!! CTGCTTAGATTGACTTGTTT+GGG + chr7_2:67935233-67935252 Msa1071420:intron 35.0%
!! AGCTGTTTTCATAAGCCATT+TGG - chr7_2:67935322-67935341 None:intergenic 35.0%
ATTAAGCTCTTCATCCAAAC+AGG + chr7_2:67935443-67935462 Msa1071420:intron 35.0%
! CAGACCTTTTTACAAGGTTA+CGG - chr7_2:67935695-67935714 None:intergenic 35.0%
CCATTCTCTTGTGGTTTAAA+TGG - chr7_2:67935779-67935798 None:intergenic 35.0%
CCATTTAAACCACAAGAGAA+TGG + chr7_2:67935776-67935795 Msa1071420:CDS 35.0%
TTTCTGTAGTAAGGATAACC+AGG - chr7_2:67935804-67935823 None:intergenic 35.0%
CAAAAAGTCAAGGTCTTGAT+TGG + chr7_2:67935904-67935923 Msa1071420:CDS 35.0%
!! GCCTGCTTTGAAAGAATATT+CGG + chr7_2:67935950-67935969 Msa1071420:CDS 35.0%
TCCGAATATTCTTTCAAAGC+AGG - chr7_2:67935954-67935973 None:intergenic 35.0%
GATCCTTATCATTATGATGG+GGG + chr7_2:67936002-67936021 Msa1071420:CDS 35.0%
! ATCCTTATCATTATGATGGG+GGG + chr7_2:67936003-67936022 Msa1071420:CDS 35.0%
TCTATTACGAGCAAGTTAGA+TGG + chr7_2:67936098-67936117 Msa1071420:CDS 35.0%
CTATTACGAGCAAGTTAGAT+GGG + chr7_2:67936099-67936118 Msa1071420:CDS 35.0%
TAAGGACTTCAATTGGGATT+GGG - chr7_2:67936142-67936161 None:intergenic 35.0%
TTAAGGACTTCAATTGGGAT+TGG - chr7_2:67936143-67936162 None:intergenic 35.0%
AATCCCAATTGAAGTCCTTA+AGG + chr7_2:67936142-67936161 Msa1071420:CDS 35.0%
CATCCTTAAGGACTTCAATT+GGG - chr7_2:67936148-67936167 None:intergenic 35.0%
GACTTCAGTAATGATATGAC+TGG + chr7_2:67936200-67936219 Msa1071420:CDS 35.0%
!! ACATTTGATGACGATATGTG+GGG - chr7_2:67936299-67936318 None:intergenic 35.0%
!! CAACATTTGATGACGATATG+TGG - chr7_2:67936301-67936320 None:intergenic 35.0%
AAGGACTTCTTGTCAATTGA+CGG - chr7_2:67936437-67936456 None:intergenic 35.0%
ATCAGTCTTCAGGATGAATT+GGG - chr7_2:67936884-67936903 None:intergenic 35.0%
TATCAGTCTTCAGGATGAAT+TGG - chr7_2:67936885-67936904 None:intergenic 35.0%
TCTTCTGTTTATCAGTCTTC+AGG - chr7_2:67936894-67936913 None:intergenic 35.0%
TGTGAGAATTCTACACTACA+AGG - chr7_2:67936937-67936956 None:intergenic 35.0%
!!! TCTCACATGTTGATTTTCTG+AGG + chr7_2:67936950-67936969 Msa1071420:three_prime_UTR 35.0%
GTCAAACAAGTTCTCAGTTT+CGG - chr7_2:67937157-67937176 None:intergenic 35.0%
! GGATTTGGTTAATGATGTGG+CGG - chr7_2:67930144-67930163 None:intergenic 40.0%
! GCTTTCAGTAGTGTGGATTA+GGG - chr7_2:67930272-67930291 None:intergenic 40.0%
TGCTTTCAGTAGTGTGGATT+AGG - chr7_2:67930273-67930292 None:intergenic 40.0%
TGAAACTGCTTTCAGTAGTG+TGG - chr7_2:67930279-67930298 None:intergenic 40.0%
AGCTTGATGAATTGATACGG+TGG - chr7_2:67930347-67930366 None:intergenic 40.0%
ACCGTATCAATTCATCAAGC+TGG + chr7_2:67930346-67930365 Msa1071420:five_prime_UTR 40.0%
CCCAGCTTGATGAATTGATA+CGG - chr7_2:67930350-67930369 None:intergenic 40.0%
CCGTATCAATTCATCAAGCT+GGG + chr7_2:67930347-67930366 Msa1071420:five_prime_UTR 40.0%
CGTATCAATTCATCAAGCTG+GGG + chr7_2:67930348-67930367 Msa1071420:five_prime_UTR 40.0%
AGCGAAAAAAAGTTAAGCGG+AGG + chr7_2:67930372-67930391 Msa1071420:five_prime_UTR 40.0%
GCGAAAAAAAGTTAAGCGGA+GGG + chr7_2:67930373-67930392 Msa1071420:five_prime_UTR 40.0%
CGAAAAAAAGTTAAGCGGAG+GGG + chr7_2:67930374-67930393 Msa1071420:five_prime_UTR 40.0%
! TGTGCTTAAGCTTTTCTGCA+GGG + chr7_2:67930675-67930694 Msa1071420:intron 40.0%
TATAAAGCCGAATTTCGGTG+TGG - chr7_2:67930781-67930800 None:intergenic 40.0%
AGATTTGAGCATATTAGGGG+TGG + chr7_2:67930832-67930851 Msa1071420:intron 40.0%
GGGCCAATCAACATAAACAA+GGG - chr7_2:67930989-67931008 None:intergenic 40.0%
AGGGCCAATCAACATAAACA+AGG - chr7_2:67930990-67931009 None:intergenic 40.0%
! TGATTTGCACTTGTTTGCGT+TGG + chr7_2:67931031-67931050 Msa1071420:intron 40.0%
! CTTGTTTGCGTTGGTCTATT+TGG + chr7_2:67931040-67931059 Msa1071420:intron 40.0%
! TGATTTGCCCTTGTTTGTGT+TGG + chr7_2:67930917-67930936 Msa1071420:intron 40.0%
AAATAGACCGACGCAAACAA+GGG - chr7_2:67931223-67931242 None:intergenic 40.0%
AAAATAGACCGACGCAAACA+AGG - chr7_2:67931224-67931243 None:intergenic 40.0%
!! TGGTAAAATATAGCGGATGG+CGG - chr7_2:67931965-67931984 None:intergenic 40.0%
! GTCTGGTAAAATATAGCGGA+TGG - chr7_2:67931968-67931987 None:intergenic 40.0%
CAAAAGGCAAATTAGGAGTC+TGG - chr7_2:67931985-67932004 None:intergenic 40.0%
!! AGGCAAATTAGGGCTTTGTT+TGG - chr7_2:67932068-67932087 None:intergenic 40.0%
! ACAAAGCCCTAATTTGCCTT+TGG + chr7_2:67932069-67932088 Msa1071420:intron 40.0%
CAGAAGTCCAAAGGCAAATT+AGG - chr7_2:67932079-67932098 None:intergenic 40.0%
TTTGCCTTTGGACTTCTGAA+AGG + chr7_2:67932081-67932100 Msa1071420:intron 40.0%
! TTGCCTTTGGACTTCTGAAA+GGG + chr7_2:67932082-67932101 Msa1071420:intron 40.0%
GGCTGAAGAAAAAGTAAACG+AGG + chr7_2:67932187-67932206 Msa1071420:intron 40.0%
CCTGAAAAACAAAACACAGC+AGG - chr7_2:67932297-67932316 None:intergenic 40.0%
!!! CCTGCTGTGTTTTGTTTTTC+AGG + chr7_2:67932294-67932313 Msa1071420:intron 40.0%
!! TTTTCAGGATCTGGGCAAAT+AGG + chr7_2:67932309-67932328 Msa1071420:intron 40.0%
GGGAAGATGATATTGGAACA+TGG - chr7_2:67932419-67932438 None:intergenic 40.0%
! CCAAGTTGGGAAGATGATAT+TGG - chr7_2:67932426-67932445 None:intergenic 40.0%
CCAATATCATCTTCCCAACT+TGG + chr7_2:67932423-67932442 Msa1071420:CDS 40.0%
ATAAGCATACTCCCCAAGTT+GGG - chr7_2:67932439-67932458 None:intergenic 40.0%
CGAGAATGTTGAAGGATGAA+TGG - chr7_2:67932762-67932781 None:intergenic 40.0%
GAATAGTGCGAGAATGTTGA+AGG - chr7_2:67932770-67932789 None:intergenic 40.0%
! AGTAAATAGGGAGGTATGGT+GGG - chr7_2:67932894-67932913 None:intergenic 40.0%
AGAGAGTAAATAGGGAGGTA+TGG - chr7_2:67932898-67932917 None:intergenic 40.0%
TCAGAAGAGAGTAAATAGGG+AGG - chr7_2:67932903-67932922 None:intergenic 40.0%
AGCAAGAAAACCAACAGAGA+TGG + chr7_2:67933378-67933397 Msa1071420:intron 40.0%
! TTGCTTTGTTCGAACGCTTT+CGG - chr7_2:67933416-67933435 None:intergenic 40.0%
! AAGGTATTACAGGTTGCAAC+AGG + chr7_2:67933535-67933554 Msa1071420:intron 40.0%
TTGACTAGAACATGCTGTTG+AGG - chr7_2:67933651-67933670 None:intergenic 40.0%
!! AAATTATTGGCCTTCGAACC+CGG + chr7_2:67934324-67934343 Msa1071420:intron 40.0%
GCTGAAAACAGTTACGTACA+TGG - chr7_2:67935282-67935301 None:intergenic 40.0%
TACAGAACTAAGGTCCTGTT+TGG - chr7_2:67935460-67935479 None:intergenic 40.0%
GCAATGAAGCTGTATCCAAA+TGG + chr7_2:67935646-67935665 Msa1071420:CDS 40.0%
! CAGCAACAGACCTTTTTACA+AGG - chr7_2:67935701-67935720 None:intergenic 40.0%
AACATTTGATCGCTGTCATC+AGG - chr7_2:67935843-67935862 None:intergenic 40.0%
GATGACAGCGATCAAATGTT+TGG + chr7_2:67935843-67935862 Msa1071420:CDS 40.0%
! TGACTTTTTGCAACCTCTCT+AGG - chr7_2:67935894-67935913 None:intergenic 40.0%
AGAGAGGTTGCAAAAAGTCA+AGG + chr7_2:67935894-67935913 Msa1071420:CDS 40.0%
AAGGTCTTGATTGGGATGAA+TGG + chr7_2:67935913-67935932 Msa1071420:CDS 40.0%
TTCCCCCCATCATAATGATA+AGG - chr7_2:67936008-67936027 None:intergenic 40.0%
! TTATCATTATGATGGGGGGA+AGG + chr7_2:67936007-67936026 Msa1071420:CDS 40.0%
! TATCATTATGATGGGGGGAA+GGG + chr7_2:67936008-67936027 Msa1071420:CDS 40.0%
AGATGTAGACTTGAAGGTTC+AGG + chr7_2:67936043-67936062 Msa1071420:CDS 40.0%
! ACAATAGGGACTGACTCTTT+CGG - chr7_2:67936077-67936096 None:intergenic 40.0%
CCATCCTTAAGGACTTCAAT+TGG - chr7_2:67936149-67936168 None:intergenic 40.0%
CCAATTGAAGTCCTTAAGGA+TGG + chr7_2:67936146-67936165 Msa1071420:CDS 40.0%
! TAATGATATGACTGGCTACG+AGG + chr7_2:67936208-67936227 Msa1071420:CDS 40.0%
! AATGATATGACTGGCTACGA+GGG + chr7_2:67936209-67936228 Msa1071420:CDS 40.0%
TGAAGACTTCTCCTTAGATC+AGG + chr7_2:67936322-67936341 Msa1071420:CDS 40.0%
AGACAAGATGACTAAACCAG+AGG + chr7_2:67936577-67936596 Msa1071420:CDS 40.0%
AGCTTGCATACCAGTTAAAC+TGG + chr7_2:67936619-67936638 Msa1071420:CDS 40.0%
AATGTGGATGTGTTGAATCC+CGG + chr7_2:67936695-67936714 Msa1071420:CDS 40.0%
TCAGTCTTCAGGATGAATTG+GGG - chr7_2:67936883-67936902 None:intergenic 40.0%
!! TAGAAGGACCGGTTTGGATT+TGG - chr7_2:67930159-67930178 None:intergenic 45.0%
! ATCTTCTAGAAGGACCGGTT+TGG - chr7_2:67930165-67930184 None:intergenic 45.0%
CGGTGAAGGAAAACGATGAA+CGG - chr7_2:67930312-67930331 None:intergenic 45.0%
! CGTTCATCGTTTTCCTTCAC+CGG + chr7_2:67930310-67930329 Msa1071420:five_prime_UTR 45.0%
AAAAAAGTTAAGCGGAGGGG+AGG + chr7_2:67930377-67930396 Msa1071420:five_prime_UTR 45.0%
AAAAAGTTAAGCGGAGGGGA+GGG + chr7_2:67930378-67930397 Msa1071420:five_prime_UTR 45.0%
TCTTCTTCGGACCCAAACAA+GGG - chr7_2:67930453-67930472 None:intergenic 45.0%
TTCTTCTTCGGACCCAAACA+AGG - chr7_2:67930454-67930473 None:intergenic 45.0%
GTTTGGGTCCGAAGAAGAAA+CGG + chr7_2:67930455-67930474 Msa1071420:CDS 45.0%
TTTGGGTCCGAAGAAGAAAC+GGG + chr7_2:67930456-67930475 Msa1071420:CDS 45.0%
TCAGGATCGAGTATTTGACC+CGG - chr7_2:67930491-67930510 None:intergenic 45.0%
TCTCTTCCCAGAAGCTTAAC+CGG - chr7_2:67930557-67930576 None:intergenic 45.0%
!! AGAAAAGGGCATTTACACGC+TGG - chr7_2:67930585-67930604 None:intergenic 45.0%
! CTGTGCTTAAGCTTTTCTGC+AGG + chr7_2:67930674-67930693 Msa1071420:intron 45.0%
! TGATTTCCCCTTGTTTGCGT+CGG + chr7_2:67931213-67931232 Msa1071420:intron 45.0%
AATAGACCGACGCAAACAAG+GGG - chr7_2:67931222-67931241 None:intergenic 45.0%
TCAAATTCGCCGCATCTGAA+CGG - chr7_2:67931324-67931343 None:intergenic 45.0%
TGATGCATCCATTGAAAGGG+CGG + chr7_2:67931341-67931360 Msa1071420:CDS 45.0%
AGCTTGAAAGGCAGATGCTA+AGG + chr7_2:67931439-67931458 Msa1071420:CDS 45.0%
CTTCCCTTTCAGAAGTCCAA+AGG - chr7_2:67932088-67932107 None:intergenic 45.0%
CACATTTGCTCCTCTTTGCT+CGG - chr7_2:67932344-67932363 None:intergenic 45.0%
AGAGAATCACTAGACTCAGG+CGG - chr7_2:67932375-67932394 None:intergenic 45.0%
TCCAGAGAATCACTAGACTC+AGG - chr7_2:67932378-67932397 None:intergenic 45.0%
CATAAGCATACTCCCCAAGT+TGG - chr7_2:67932440-67932459 None:intergenic 45.0%
! CAACTTGGGGAGTATGCTTA+TGG + chr7_2:67932438-67932457 Msa1071420:CDS 45.0%
! GAGTAAATAGGGAGGTATGG+TGG - chr7_2:67932895-67932914 None:intergenic 45.0%
TAGGGTACATTGGCCAATCT+AGG - chr7_2:67932991-67933010 None:intergenic 45.0%
AGGAAACAGAGAGACAGAGA+AGG + chr7_2:67933167-67933186 Msa1071420:intron 45.0%
GCCTTTACACAAGTCGTGAA+GGG + chr7_2:67933353-67933372 Msa1071420:intron 45.0%
ACCCTTCACGACTTGTGTAA+AGG - chr7_2:67933357-67933376 None:intergenic 45.0%
CGTCATGTAACCATCTCTGT+TGG - chr7_2:67933391-67933410 None:intergenic 45.0%
TTACATTGATAGGACCCGTG+CGG - chr7_2:67934163-67934182 None:intergenic 45.0%
TAACTCACCCATGCATCTCT+CGG - chr7_2:67934289-67934308 None:intergenic 45.0%
!! AATTATTGGCCTTCGAACCC+GGG + chr7_2:67934325-67934344 Msa1071420:intron 45.0%
!! GCACCTTCAAGTTGTTTGTG+TGG - chr7_2:67934359-67934378 None:intergenic 45.0%
! ATGGTGCAACATGTTGACTG+TGG - chr7_2:67934476-67934495 None:intergenic 45.0%
TCAACATGTTGCACCATGCA+GGG + chr7_2:67934479-67934498 Msa1071420:intron 45.0%
! AACTGCAGAAACTGGTGATG+AGG + chr7_2:67935518-67935537 Msa1071420:intron 45.0%
!! ACAAGAAAGCACTAGCAGTG+AGG + chr7_2:67935551-67935570 Msa1071420:CDS 45.0%
ATAAAGGTGAGGCATGTCAC+TGG - chr7_2:67935607-67935626 None:intergenic 45.0%
ATACACCCTAACTCCTAGAG+AGG + chr7_2:67935878-67935897 Msa1071420:CDS 45.0%
! TGCAACCTCTCTAGGAGTTA+GGG - chr7_2:67935886-67935905 None:intergenic 45.0%
! TTGCAACCTCTCTAGGAGTT+AGG - chr7_2:67935887-67935906 None:intergenic 45.0%
GCTGGTAGATGTAGACTTGA+AGG + chr7_2:67936037-67936056 Msa1071420:CDS 45.0%
! CAATAGGGACTGACTCTTTC+GGG - chr7_2:67936076-67936095 None:intergenic 45.0%
TGTCAGTTGAGCCATCCTTA+AGG - chr7_2:67936160-67936179 None:intergenic 45.0%
! CCAATGGCTTGCATTATGAC+TGG - chr7_2:67936387-67936406 None:intergenic 45.0%
CCAGTCATAATGCAAGCCAT+TGG + chr7_2:67936384-67936403 Msa1071420:CDS 45.0%
GCAAGCCATTGGAAGAAGAA+CGG + chr7_2:67936395-67936414 Msa1071420:CDS 45.0%
TAAGGCCGTTCTTCTTCCAA+TGG - chr7_2:67936403-67936422 None:intergenic 45.0%
AAGAACGGCCTTAACAATGC+CGG + chr7_2:67936410-67936429 Msa1071420:CDS 45.0%
ATGACTAAACCAGAGGTCTC+TGG + chr7_2:67936584-67936603 Msa1071420:CDS 45.0%
TGACTAAACCAGAGGTCTCT+GGG + chr7_2:67936585-67936604 Msa1071420:CDS 45.0%
GTGATGGCACAACAAATTGC+TGG + chr7_2:67936782-67936801 Msa1071420:three_prime_UTR 45.0%
GGTGTAGAGCATACAAGTAG+GGG - chr7_2:67937136-67937155 None:intergenic 45.0%
CGGTGTAGAGCATACAAGTA+GGG - chr7_2:67937137-67937156 None:intergenic 45.0%
TCGGTGTAGAGCATACAAGT+AGG - chr7_2:67937138-67937157 None:intergenic 45.0%
!!! AAATTTTAAGAAAAAAATTA+GGG + chr7_2:67931547-67931566 Msa1071420:intron 5.0%
ATGGCCACGGTAGTTGTCAA+GGG - chr7_2:67930119-67930138 None:intergenic 50.0%
! GGTTAATGATGTGGCGGAGA+TGG - chr7_2:67930138-67930157 None:intergenic 50.0%
! TCATCGTTTTCCTTCACCGG+CGG + chr7_2:67930313-67930332 Msa1071420:five_prime_UTR 50.0%
AAAAGTTAAGCGGAGGGGAG+GGG + chr7_2:67930379-67930398 Msa1071420:five_prime_UTR 50.0%
GACCCAAACAAGGGATCCAA+CGG - chr7_2:67930444-67930463 None:intergenic 50.0%
ACCACGACCCGTTTCTTCTT+CGG - chr7_2:67930466-67930485 None:intergenic 50.0%
AGGTGAGGTCAGATGAGAAG+CGG - chr7_2:67930522-67930541 None:intergenic 50.0%
TTAACCGGAGTTCCAGATCG+AGG - chr7_2:67930542-67930561 None:intergenic 50.0%
TGGAACTCCGGTTAAGCTTC+TGG + chr7_2:67930547-67930566 Msa1071420:CDS 50.0%
GGAACTCCGGTTAAGCTTCT+GGG + chr7_2:67930548-67930567 Msa1071420:CDS 50.0%
! AAAGCCGAATTTCGGTGTGG+CGG - chr7_2:67930778-67930797 None:intergenic 50.0%
CATCTGCCTTTCAAGCTCCA+GGG - chr7_2:67931436-67931455 None:intergenic 50.0%
TTTGTAGGACTGTGGGCTCT+AGG + chr7_2:67931617-67931636 Msa1071420:intron 50.0%
GCCTGAGTCTAGTGATTCTC+TGG + chr7_2:67932374-67932393 Msa1071420:CDS 50.0%
! GAGGTATGGTGGGAACTAGT+AGG - chr7_2:67932884-67932903 None:intergenic 50.0%
CGCCTTTACACAAGTCGTGA+AGG + chr7_2:67933352-67933371 Msa1071420:intron 50.0%
AAATCTTACACGCGGACTCG+TGG + chr7_2:67933586-67933605 Msa1071420:intron 50.0%
TAGTGCATCCGAGAGATGCA+TGG + chr7_2:67934278-67934297 Msa1071420:intron 50.0%
AGTGCATCCGAGAGATGCAT+GGG + chr7_2:67934279-67934298 Msa1071420:intron 50.0%
! TTTGTGTGGAATTGGTGCCC+GGG - chr7_2:67934345-67934364 None:intergenic 50.0%
! GTTTGTGTGGAATTGGTGCC+CGG - chr7_2:67934346-67934365 None:intergenic 50.0%
GTCAACATGTTGCACCATGC+AGG + chr7_2:67934478-67934497 Msa1071420:intron 50.0%
CAACATGTTGCACCATGCAG+GGG + chr7_2:67934480-67934499 Msa1071420:intron 50.0%
! GACAATTTAAGGCCCCTGCA+TGG - chr7_2:67934495-67934514 None:intergenic 50.0%
TGATGGTTAAGGTGAGAGGG+AGG - chr7_2:67935120-67935139 None:intergenic 50.0%
ACATGCCTCACCTTTATCCG+CGG + chr7_2:67935610-67935629 Msa1071420:CDS 50.0%
ACAGCTTCATTGCACGTTCG+AGG - chr7_2:67935639-67935658 None:intergenic 50.0%
! GGTCTGTTGCTGCTTCTGAT+AGG + chr7_2:67935709-67935728 Msa1071420:CDS 50.0%
TTGATTGGGATGAATGGCCG+TGG + chr7_2:67935919-67935938 Msa1071420:CDS 50.0%
TGATTGGGATGAATGGCCGT+GGG + chr7_2:67935920-67935939 Msa1071420:CDS 50.0%
GTAGTGTACTTCCACCAGCT+TGG + chr7_2:67936234-67936253 Msa1071420:CDS 50.0%
ATGACGATATGTGGGGACGA+GGG - chr7_2:67936292-67936311 None:intergenic 50.0%
AGAACGGCCTTAACAATGCC+GGG + chr7_2:67936411-67936430 Msa1071420:CDS 50.0%
CTTCTTGTCAATTGACGGCC+CGG - chr7_2:67936432-67936451 None:intergenic 50.0%
! TACGATTTTCTCTCCACGCC+GGG - chr7_2:67936716-67936735 None:intergenic 50.0%
! CTACGATTTTCTCTCCACGC+CGG - chr7_2:67936717-67936736 None:intergenic 50.0%
GCATACAAGTAGGGGACAGA+GGG - chr7_2:67937128-67937147 None:intergenic 50.0%
AGCATACAAGTAGGGGACAG+AGG - chr7_2:67937129-67937148 None:intergenic 50.0%
GCAACCCTTGACAACTACCG+TGG + chr7_2:67930112-67930131 Msa1071420:five_prime_UTR 55.0%
GATGGCCACGGTAGTTGTCA+AGG - chr7_2:67930120-67930139 None:intergenic 55.0%
GAGATGGATGGGGAGGGTTT+AGG + chr7_2:67930404-67930423 Msa1071420:exon 55.0%
! CGCCGTTGGATCCCTTGTTT+GGG + chr7_2:67930439-67930458 Msa1071420:CDS 55.0%
TCCGAAGAAGAAACGGGTCG+TGG + chr7_2:67930462-67930481 Msa1071420:CDS 55.0%
GAAGAAGAAACGGGTCGTGG+TGG + chr7_2:67930465-67930484 Msa1071420:CDS 55.0%
TGAGAAGCGGCAAGGTCATC+AGG - chr7_2:67930509-67930528 None:intergenic 55.0%
AGGTCAGATGAGAAGCGGCA+AGG - chr7_2:67930517-67930536 None:intergenic 55.0%
CATCTGACCTCACCTCGATC+TGG + chr7_2:67930527-67930546 Msa1071420:CDS 55.0%
! CTCACCTCGATCTGGAACTC+CGG + chr7_2:67930535-67930554 Msa1071420:CDS 55.0%
CCATCCGCCACACCGAAATT+CGG + chr7_2:67930771-67930790 Msa1071420:intron 55.0%
TCTGAACGGCTTCACTCGCT+TGG - chr7_2:67931310-67931329 None:intergenic 55.0%
CGAGTGAAGCCGTTCAGATG+CGG + chr7_2:67931312-67931331 Msa1071420:CDS 55.0%
AGCTGTCTCCGCCCTTTCAA+TGG - chr7_2:67931352-67931371 None:intergenic 55.0%
AGATGCTATTCTCCACGCCC+TGG + chr7_2:67931416-67931435 Msa1071420:CDS 55.0%
GCATCTGCCTTTCAAGCTCC+AGG - chr7_2:67931437-67931456 None:intergenic 55.0%
!! TGTGGGCTCTAGGCTCTGTT+TGG + chr7_2:67931627-67931646 Msa1071420:intron 55.0%
TGGTTAAGGTGAGAGGGAGG+AGG - chr7_2:67935117-67935136 None:intergenic 55.0%
CATGCCTCACCTTTATCCGC+GGG + chr7_2:67935611-67935630 Msa1071420:CDS 55.0%
TTCGAGGTTCCCGCGGATAA+AGG - chr7_2:67935623-67935642 None:intergenic 55.0%
AACCACAAGAGAATGGGGCC+TGG + chr7_2:67935783-67935802 Msa1071420:CDS 55.0%
AACCAGGCCCCATTCTCTTG+TGG - chr7_2:67935788-67935807 None:intergenic 55.0%
AAAGCAGGCTGATCCTCCCA+CGG - chr7_2:67935939-67935958 None:intergenic 55.0%
GTGTACTTCCACCAGCTTGG+AGG + chr7_2:67936237-67936256 Msa1071420:CDS 55.0%
GATGACGATATGTGGGGACG+AGG - chr7_2:67936293-67936312 None:intergenic 55.0%
TTGACGGCCCGGCATTGTTA+AGG - chr7_2:67936421-67936440 None:intergenic 55.0%
CGGCGTGGAGAGAAAATCGT+AGG + chr7_2:67936715-67936734 Msa1071420:CDS 55.0%
! TGATGTGGCGGAGATGGCCA+CGG - chr7_2:67930132-67930151 None:intergenic 60.0%
! TCGTTTTCCTTCACCGGCGG+CGG + chr7_2:67930316-67930335 Msa1071420:five_prime_UTR 60.0%
TGGGGAGGGTTTAGGTGCAG+AGG + chr7_2:67930412-67930431 Msa1071420:CDS 60.0%
GCGCCGTTGGATCCCTTGTT+TGG + chr7_2:67930438-67930457 Msa1071420:CDS 60.0%
AAGAAACGGGTCGTGGTGGC+CGG + chr7_2:67930469-67930488 Msa1071420:CDS 60.0%
CGGAGTTCCAGATCGAGGTG+AGG - chr7_2:67930537-67930556 None:intergenic 60.0%
! CCGAATTTCGGTGTGGCGGA+TGG - chr7_2:67930774-67930793 None:intergenic 60.0%
TGAAAGGGCGGAGACAGCTC+TGG + chr7_2:67931353-67931372 Msa1071420:CDS 60.0%
GAAAGGGCGGAGACAGCTCT+GGG + chr7_2:67931354-67931373 Msa1071420:CDS 60.0%
TCCACGCCCTGGAGCTTGAA+AGG + chr7_2:67931427-67931446 Msa1071420:CDS 60.0%
GCGCAGCATTCCGAGCAAAG+AGG + chr7_2:67932331-67932350 Msa1071420:CDS 60.0%
ACACGCGGACTCGTGGATGA+TGG + chr7_2:67933593-67933612 Msa1071420:intron 60.0%
TCTTGACCCGTGCTACCGCA+CGG + chr7_2:67934145-67934164 Msa1071420:intron 60.0%
ATAGGACCCGTGCGGTAGCA+CGG - chr7_2:67934155-67934174 None:intergenic 60.0%
! GAATTGGTGCCCGGGTTCGA+AGG - chr7_2:67934337-67934356 None:intergenic 60.0%
GGTTCCCGCGGATAAAGGTG+AGG - chr7_2:67935618-67935637 None:intergenic 60.0%
TTGCACGTTCGAGGTTCCCG+CGG - chr7_2:67935630-67935649 None:intergenic 60.0%
TTGGGATGAATGGCCGTGGG+AGG + chr7_2:67935923-67935942 Msa1071420:CDS 60.0%
TGGGGGGAAGGGATCAATGC+TGG + chr7_2:67936019-67936038 Msa1071420:CDS 60.0%
GTAGTGAGCCCAGAGACCTC+TGG - chr7_2:67936596-67936615 None:intergenic 60.0%
GGATGTGTTGAATCCCGGCG+TGG + chr7_2:67936700-67936719 Msa1071420:CDS 60.0%
AAGTAGGGGACAGAGGGACG+AGG - chr7_2:67937122-67937141 None:intergenic 60.0%
AGTTAAGCGGAGGGGAGGGG+AGG + chr7_2:67930382-67930401 Msa1071420:five_prime_UTR 65.0%
AGGGGAGGGGAGGAGATGGA+TGG + chr7_2:67930392-67930411 Msa1071420:exon 65.0%
GGGGAGGGGAGGAGATGGAT+GGG + chr7_2:67930393-67930412 Msa1071420:exon 65.0%
GGGAGGGGAGGAGATGGATG+GGG + chr7_2:67930394-67930413 Msa1071420:exon 65.0%
AGGGGAGGAGATGGATGGGG+AGG + chr7_2:67930397-67930416 Msa1071420:exon 65.0%
GGGGAGGAGATGGATGGGGA+GGG + chr7_2:67930398-67930417 Msa1071420:exon 65.0%
GGTGCAGAGGATTGCGCCGT+TGG + chr7_2:67930425-67930444 Msa1071420:CDS 65.0%
AGAAACGGGTCGTGGTGGCC+GGG + chr7_2:67930470-67930489 Msa1071420:CDS 65.0%
GCCTTTCAAGCTCCAGGGCG+TGG - chr7_2:67931431-67931450 None:intergenic 65.0%
CTTGACCCGTGCTACCGCAC+GGG + chr7_2:67934146-67934165 Msa1071420:intron 65.0%
TAGGACCCGTGCGGTAGCAC+GGG - chr7_2:67934154-67934173 None:intergenic 65.0%
CTCGCAGTCCTCCAAGCTGG+TGG - chr7_2:67936248-67936267 None:intergenic 65.0%
CACCAGCTTGGAGGACTGCG+AGG + chr7_2:67936246-67936265 Msa1071420:CDS 65.0%
CTCCTCGCAGTCCTCCAAGC+TGG - chr7_2:67936251-67936270 None:intergenic 65.0%
TACGGTGGCGCAACCGCCGC+CGG - chr7_2:67930332-67930351 None:intergenic 75.0%
GCGGAGGGGAGGGGAGGAGA+TGG + chr7_2:67930388-67930407 Msa1071420:exon 75.0%
! GGCGCAACCGCCGCCGGTGA+AGG - chr7_2:67930326-67930345 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 67930074 67937209 67930074 ID=Msa1071420;Name=Msa1071420
chr7_2 mRNA 67930074 67937209 67930074 ID=Msa1071420-mRNA-1;Parent=Msa1071420;Name=Msa1071420-mRNA-1;_AED=0.09;_eAED=0.09;_QI=333|1|1|1|1|1|4|473|623
chr7_2 exon 67930074 67930588 67930074 ID=Msa1071420-mRNA-1:exon:14790;Parent=Msa1071420-mRNA-1
chr7_2 exon 67931284 67931477 67931284 ID=Msa1071420-mRNA-1:exon:14791;Parent=Msa1071420-mRNA-1
chr7_2 exon 67932316 67932600 67932316 ID=Msa1071420-mRNA-1:exon:14792;Parent=Msa1071420-mRNA-1
chr7_2 exon 67935526 67937209 67935526 ID=Msa1071420-mRNA-1:exon:14793;Parent=Msa1071420-mRNA-1
chr7_2 five_prime_UTR 67930074 67930406 67930074 ID=Msa1071420-mRNA-1:five_prime_utr;Parent=Msa1071420-mRNA-1
chr7_2 CDS 67930407 67930588 67930407 ID=Msa1071420-mRNA-1:cds;Parent=Msa1071420-mRNA-1
chr7_2 CDS 67931284 67931477 67931284 ID=Msa1071420-mRNA-1:cds;Parent=Msa1071420-mRNA-1
chr7_2 CDS 67932316 67932600 67932316 ID=Msa1071420-mRNA-1:cds;Parent=Msa1071420-mRNA-1
chr7_2 CDS 67935526 67936736 67935526 ID=Msa1071420-mRNA-1:cds;Parent=Msa1071420-mRNA-1
chr7_2 three_prime_UTR 67936737 67937209 67936737 ID=Msa1071420-mRNA-1:three_prime_utr;Parent=Msa1071420-mRNA-1
Gene Sequence

>Msa1071420

ATGGATGGGGAGGGTTTAGGTGCAGAGGATTGCGCCGTTGGATCCCTTGTTTGGGTCCGAAGAAGAAACGGGTCGTGGTGGCCGGGTCAAATACTCGATCCTGATGACCTTGCCGCTTCTCATCTGACCTCACCTCGATCTGGAACTCCGGTTAAGCTTCTGGGAAGAGAAGATGCCAGCGTAGATTGGTATAATTTGGAGAAATCCAAGCGAGTGAAGCCGTTCAGATGCGGCGAATTTGATGCATCCATTGAAAGGGCGGAGACAGCTCTGGGTATGCCATTGAAGAAAAGAGAGAAATATGCACGAAGAGAAGATGCTATTCTCCACGCCCTGGAGCTTGAAAGGCAGATGCTAAGGAAACAAGATAAATTAGGATCTGGGCAAATAGGCGCAGCATTCCGAGCAAAGAGGAGCAAATGTGTGTACTTGCCGCCTGAGTCTAGTGATTCTCTGGATTACAATGAAACTCTAGCCCATGTTCCAATATCATCTTCCCAACTTGGGGAGTATGCTTATGGAAGTTCATTTGCTGAGGAGAGCGAATCTGCTTTTCTGAATGATGTTGAATCTGATTCTTCTGAAACTGCTTCTATTAAATCGGAATCAGATTCTTCTGAAACAGAACTAGACAATGACGAAGACATGACTATATTTTCAGAAACTGGTGATGAGGACGACGAAGAACAAGAAAGCACTAGCAGTGAGGAGCATGATGAGTTAGCTGAGTTAGCAACTTCCAGTGACATGCCTCACCTTTATCCGCGGGAACCTCGAACGTGCAATGAAGCTGTATCCAAATGGCAATTAAAAGGAAAGAGGAATAACCGTAACCTTGTAAAAAGGTCTGTTGCTGCTTCTGATAGGAAAGACGTTGTTTTATATGGAGCAGATATTGAAGGACAGAGAAGCCATTTAAACCACAAGAGAATGGGGCCTGGTTATCCTTACTACAGAAATGACTATAGTGATGCTCCTGATGACAGCGATCAAATGTTTGGATCAGAAGATGAATACACCCTAACTCCTAGAGAGGTTGCAAAAAGTCAAGGTCTTGATTGGGATGAATGGCCGTGGGAGGATCAGCCTGCTTTGAAAGAATATTCGGATTTTAAAGGGTTTGCTTCATTATATAGTGATCCTTATCATTATGATGGGGGGAAGGGATCAATGCTGGTAGATGTAGACTTGAAGGTTCAGGCAAGTTACCCGAAAGAGTCAGTCCCTATTGTATCTATTACGAGCAAGTTAGATGGGAGTTCTATAATTGGACGCCCAATCCCAATTGAAGTCCTTAAGGATGGCTCAACTGACAATCTATTTTCTGCAATTGATGACTTCAGTAATGATATGACTGGCTACGAGGGAAGTAGTGTACTTCCACCAGCTTGGAGGACTGCGAGGAGAACAGCTAACTTTCGTGTCCCTCGTCCCCACATATCGTCATCAAATGTTGATGAAGACTTCTCCTTAGATCAGGAAAGAAATAATGGATATAAGAGATTAAATGGTGGAAATTCCAGTCATAATGCAAGCCATTGGAAGAAGAACGGCCTTAACAATGCCGGGCCGTCAATTGACAAGAAGTCCTTTAAAAAGAGTGCAAAAAAAGTGAGCTTGTCATCTAGTCAGAAAACTAGAACCCTTTCCTCTTTATCTATTGAAGATAATCTTGGTAGAAAACCATCACTTACTAGAAGCTTTTATCGAACAGACAAGATGACTAAACCAGAGGTCTCTGGGCTCACTACTGTAGCTTGCATACCAGTTAAACTGGTATTTAGTAGATTACTTGAGAAGATTAATAGGCCACCTTTAAAAGCATCTACTAATGTGGATGTGTTGAATCCCGGCGTGGAGAGAAAATCGTAG
Protein sequence

>Msa1071420

MDGEGLGAEDCAVGSLVWVRRRNGSWWPGQILDPDDLAASHLTSPRSGTPVKLLGREDASVDWYNLEKSKRVKPFRCGEFDASIERAETALGMPLKKREKYARREDAILHALELERQMLRKQDKLGSGQIGAAFRAKRSKCVYLPPESSDSLDYNETLAHVPISSSQLGEYAYGSSFAEESESAFLNDVESDSSETASIKSESDSSETELDNDEDMTIFSETGDEDDEEQESTSSEEHDELAELATSSDMPHLYPREPRTCNEAVSKWQLKGKRNNRNLVKRSVAASDRKDVVLYGADIEGQRSHLNHKRMGPGYPYYRNDYSDAPDDSDQMFGSEDEYTLTPREVAKSQGLDWDEWPWEDQPALKEYSDFKGFASLYSDPYHYDGGKGSMLVDVDLKVQASYPKESVPIVSITSKLDGSSIIGRPIPIEVLKDGSTDNLFSAIDDFSNDMTGYEGSSVLPPAWRTARRTANFRVPRPHISSSNVDEDFSLDQERNNGYKRLNGGNSSHNASHWKKNGLNNAGPSIDKKSFKKSAKKVSLSSSQKTRTLSSLSIEDNLGRKPSLTRSFYRTDKMTKPEVSGLTTVACIPVKLVFSRLLEKINRPPLKASTNVDVLNPGVERKS*