AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0026780

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0026780 MtrunA17_Chr1g0182571 98.753 481 6 0 1 481 1 481 0.0 979
Msa0026780 MtrunA17_Chr7g0262921 65.208 457 101 10 1 444 1 412 0.0 558
Msa0026780 MtrunA17_Chr8g0366741 48.039 102 53 0 7 108 13 114 1.01e-27 114
Msa0026780 MtrunA17_Chr8g0366731 44.762 105 58 0 7 111 13 117 2.75e-27 113
Msa0026780 MtrunA17_Chr2g0292461 48.864 88 43 2 5 91 19 105 3.24e-21 94.4
Msa0026780 MtrunA17_Chr2g0318391 48.101 79 41 0 5 83 17 95 2.13e-20 94.0
Msa0026780 MtrunA17_Chr8g0360731 48.101 79 41 0 5 83 17 95 7.08e-20 92.0
Msa0026780 MtrunA17_Chr6g0481511 51.351 74 36 0 4 77 33 106 2.51e-19 87.8
Msa0026780 MtrunA17_Chr3g0083541 48.052 77 39 1 6 81 53 129 2.33e-17 84.0
Msa0026780 MtrunA17_Chr8g0352731 50.000 70 34 1 13 81 3 72 3.02e-17 80.1
Msa0026780 MtrunA17_Chr8g0380371 51.786 56 27 0 1 56 6 61 8.35e-16 72.0
Msa0026780 MtrunA17_Chr4g0037651 46.053 76 39 1 10 83 485 560 3.21e-15 78.6
Msa0026780 MtrunA17_Chr8g0385781 48.571 70 34 1 10 77 500 569 1.64e-14 76.3
Msa0026780 MtrunA17_Chr7g0221441 47.143 70 35 1 10 77 508 577 9.63e-14 73.9
Msa0026780 MtrunA17_Chr3g0131671 44.286 70 37 1 10 77 503 572 4.12e-12 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0026780 AT2G37550.2 61.585 492 142 8 1 481 1 456 0.0 553
Msa0026780 AT2G37550.1 61.585 492 142 8 1 481 1 456 0.0 553
Msa0026780 AT3G53710.1 61.847 498 134 13 1 481 1 459 0.0 542
Msa0026780 AT3G53710.3 61.847 498 134 13 1 481 1 459 0.0 542
Msa0026780 AT3G53710.2 61.847 498 134 13 1 481 1 459 0.0 542
Msa0026780 AT4G17890.2 48.571 105 54 0 7 111 16 120 1.42e-29 119
Msa0026780 AT4G17890.1 48.571 105 54 0 7 111 16 120 2.30e-29 119
Msa0026780 AT5G46750.1 48.571 105 54 0 7 111 13 117 6.86e-29 118
Msa0026780 AT2G35210.1 46.667 105 56 0 7 111 13 117 1.10e-27 114
Msa0026780 AT2G35210.2 46.667 105 56 0 7 111 13 117 2.78e-27 113
Msa0026780 AT4G05330.3 48.810 84 42 1 5 87 16 99 4.04e-22 97.8
Msa0026780 AT4G05330.1 48.810 84 42 1 5 87 16 99 4.04e-22 97.8
Msa0026780 AT5G54310.1 41.803 122 68 2 7 128 19 137 1.24e-21 97.8
Msa0026780 AT3G17660.4 52.703 74 35 0 4 77 16 89 2.68e-21 91.7
Msa0026780 AT3G17660.1 52.703 74 35 0 4 77 16 89 3.28e-21 92.8
Msa0026780 AT4G21160.2 47.727 88 44 2 5 91 16 102 4.08e-21 94.7
Msa0026780 AT4G21160.3 47.727 88 44 2 5 91 16 102 4.08e-21 94.7
Msa0026780 AT4G21160.1 47.727 88 44 2 5 91 16 102 4.08e-21 94.7
Msa0026780 AT4G21160.4 47.727 88 44 2 5 91 16 102 4.08e-21 94.7
Msa0026780 AT3G17660.2 52.703 74 35 0 4 77 16 89 8.81e-21 92.0
Msa0026780 AT3G07940.2 50.649 77 37 1 6 81 49 125 9.26e-20 89.4
Msa0026780 AT3G07940.1 50.649 77 37 1 6 81 49 125 3.34e-19 89.7
Msa0026780 AT1G60860.2 54.386 57 26 0 7 63 359 415 2.59e-15 79.0
Msa0026780 AT1G60860.1 54.386 57 26 0 7 63 470 526 2.64e-15 79.3
Msa0026780 AT1G60860.3 54.386 57 26 0 7 63 299 355 3.04e-15 79.0
Msa0026780 AT3G17660.3 50.000 58 29 0 4 61 16 73 3.68e-14 72.0
Msa0026780 AT5G13300.1 48.571 70 34 1 10 77 507 576 3.99e-14 75.5
Msa0026780 AT5G61980.1 45.714 70 36 1 15 82 509 578 1.11e-13 74.3
Msa0026780 AT1G10870.1 50.000 54 27 0 10 63 473 526 3.05e-13 72.8
Msa0026780 AT1G10870.2 50.000 54 27 0 10 63 473 526 3.28e-13 72.8

Find 199 sgRNAs with CRISPR-Local

Find 334 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTCTGAAGAATTAAGATT+TGG 0.281660 1_1:-50826801 None:intergenic
CTTCTTAATTTAACTTTGTA+TGG 0.293258 1_1:+50826889 Msa0026780:three_prime_UTR
TGGGATAGGGAAGGAGGTTC+GGG 0.309762 1_1:+50823837 Msa0026780:CDS
AAGAAAGCTGCTGGACATAA+TGG 0.311171 1_1:+50825786 Msa0026780:CDS
CACAAAAGAGATTACTTCTA+AGG 0.329121 1_1:+50824356 Msa0026780:CDS
CTCAAACTCTTGGGACGATT+GGG 0.331416 1_1:+50825530 Msa0026780:CDS
TATTTATACGCGGTCGCAAT+TGG 0.334644 1_1:+50823944 Msa0026780:CDS
TGGCGGCATCACGGCGGCTC+CGG 0.342322 1_1:+50823385 Msa0026780:CDS
TTGGGATAGGGAAGGAGGTT+CGG 0.345457 1_1:+50823836 Msa0026780:CDS
ATCCCAGCTCTTGGGATGAT+TGG 0.345579 1_1:+50825634 Msa0026780:CDS
ATGATGCTGGTTGGGCTGGC+TGG 0.346920 1_1:+50825712 Msa0026780:CDS
GGTGAGGTGTGAGAGGAGTT+TGG 0.355092 1_1:-50823308 None:intergenic
ATCGGAGGATGAAGTGTAGA+AGG 0.360348 1_1:-50823356 None:intergenic
GCAGATCTTGTTGCCGGGTT+GGG 0.371767 1_1:-50823418 None:intergenic
CAAATTCGACTACTAATAAC+TGG 0.372531 1_1:+50825391 Msa0026780:CDS
CCGGTTGTGAAGGAGAATTT+AGG 0.374910 1_1:+50823753 Msa0026780:CDS
GGAGTTGATCCTTTATTAGT+AGG 0.375169 1_1:-50825579 None:intergenic
ATGATTCCGGCTGGGATGAT+TGG 0.384077 1_1:+50823817 Msa0026780:CDS
TGAGAGGAGTTTGGAGAAAG+TGG 0.392185 1_1:-50823299 None:intergenic
TATTCATCTGGTGGGCAGTC+TGG 0.394756 1_1:+50825603 Msa0026780:CDS
AGTTTATCGTGATCGGATTC+AGG 0.397292 1_1:+50823698 Msa0026780:CDS
CTTCCTTCCTAGAATCTTTG+TGG 0.398078 1_1:-50825659 None:intergenic
AAGGGAGAACCTACTAATAA+AGG 0.401153 1_1:+50825570 Msa0026780:CDS
GACTGCCCACCAGATGAATA+AGG 0.405430 1_1:-50825600 None:intergenic
GCTCTGAAGAATTAAGATTT+GGG 0.409035 1_1:-50826800 None:intergenic
TGATAGAAATGGCTACTATC+AGG 0.410799 1_1:+50825428 Msa0026780:CDS
CGCAGATCTTGTTGCCGGGT+TGG 0.414757 1_1:-50823419 None:intergenic
TGTTGCCGGGTTGGGATTGA+AGG 0.414970 1_1:-50823410 None:intergenic
GCTCAAACTCTTGGGACGAT+TGG 0.416102 1_1:+50825529 Msa0026780:CDS
ATTGGGACCACAAAGATTCT+AGG 0.416709 1_1:+50825652 Msa0026780:CDS
CCACAATAATGATGCTGGTT+GGG 0.420450 1_1:+50825704 Msa0026780:CDS
TCCCAGCTCTTGGGATGATT+GGG 0.422693 1_1:+50825635 Msa0026780:CDS
GGCGGCATCACGGCGGCTCC+GGG 0.423745 1_1:+50823386 Msa0026780:CDS
CGCCGATGGGGCAGAGTCGC+CGG 0.424686 1_1:+50823790 Msa0026780:CDS
CGAAATGAGAATGATAGAAA+TGG 0.430727 1_1:+50825417 Msa0026780:CDS
AAACTCAAAGCTCAAACTCT+TGG 0.431090 1_1:+50825520 Msa0026780:CDS
AATAATGATGCTGGTTGGGC+TGG 0.431540 1_1:+50825708 Msa0026780:CDS
TCGGTCGTGGCGTGATCCTC+CGG 0.431712 1_1:+50823734 Msa0026780:CDS
TTCCTTCGGAATAGAATACT+TGG 0.434318 1_1:-50823637 None:intergenic
TGATTCCGGCTGGGATGATT+GGG 0.435890 1_1:+50823818 Msa0026780:CDS
TACTATCAGGATTTCAATCA+AGG 0.437121 1_1:+50825441 Msa0026780:CDS
CGCAAGGTGGGAAGTATGTT+GGG 0.437210 1_1:+50824048 Msa0026780:CDS
TACTCACAATCCCAGCTCTT+GGG 0.438114 1_1:+50825626 Msa0026780:CDS
GGATCAACTCCTTATTCATC+TGG 0.439382 1_1:+50825591 Msa0026780:CDS
GGAAGAGAACAATCTTCATC+AGG 0.440220 1_1:+50825489 Msa0026780:CDS
AAATCAGATGACGCTTGGAC+AGG 0.441545 1_1:+50825810 Msa0026780:CDS
GGGGATTGGTAAGTTGTCAT+TGG 0.442974 1_1:+50824299 Msa0026780:intron
ATTTACAAGTGTTGAAAGAA+AGG 0.443584 1_1:+50826769 Msa0026780:three_prime_UTR
AGAAAGCTGCTGGACATAAT+GGG 0.444118 1_1:+50825787 Msa0026780:CDS
CCTAAATTCTCCTTCACAAC+CGG 0.446662 1_1:-50823753 None:intergenic
TCCGGAAAACACCGTGGTCT+CGG 0.447372 1_1:+50823510 Msa0026780:CDS
AACTCAAAGCTCAAACTCTT+GGG 0.448408 1_1:+50825521 Msa0026780:CDS
TGGGGAGCTGATGCTTTAGC+TGG 0.452701 1_1:-50825684 None:intergenic
CATGGCTTTGGCTTCACAGA+AGG 0.454790 1_1:+50825344 Msa0026780:CDS
TGCGACGGTGGAAGTCCTTC+CGG 0.458253 1_1:-50824029 None:intergenic
AAGGAGAATTTAGGTTCAAA+GGG 0.460070 1_1:+50823762 Msa0026780:CDS
ATCGACGCAGATCTTGTTGC+CGG 0.461374 1_1:-50823424 None:intergenic
AAAGGAGGTAATTCTTCTAC+TGG 0.461732 1_1:+50825468 Msa0026780:CDS
CGGATTCAGGCTTTGTCGGA+AGG 0.463866 1_1:+50823711 Msa0026780:CDS
GTCCCAATCATCCCAAGAGC+TGG 0.464845 1_1:-50825637 None:intergenic
TGATCGGATTCAGGCTTTGT+CGG 0.466457 1_1:+50823707 Msa0026780:CDS
GTAACAATATCCGTTTCCTT+CGG 0.466590 1_1:-50823651 None:intergenic
TTCAAAGGGAAGGCCGCCGA+TGG 0.468886 1_1:+50823776 Msa0026780:CDS
GTGTAGAAGGATGGAAATGA+GGG 0.470207 1_1:-50823343 None:intergenic
AATCAGATGACGCTTGGACA+GGG 0.470359 1_1:+50825811 Msa0026780:CDS
CAGTCTCGAGATTGTTCCAT+TGG 0.470757 1_1:+50826507 Msa0026780:three_prime_UTR
TGATGCTGGTTGGGCTGGCT+GGG 0.473809 1_1:+50825713 Msa0026780:CDS
GTACTCACAATCCCAGCTCT+TGG 0.474135 1_1:+50825625 Msa0026780:CDS
CTGCTTCAGTTTATCGTGAT+CGG 0.474442 1_1:+50823691 Msa0026780:CDS
GAAGGAGAATTTAGGTTCAA+AGG 0.482185 1_1:+50823761 Msa0026780:CDS
AGCTTCTGCGGCGGGTAAAG+AGG 0.482654 1_1:+50823968 Msa0026780:CDS
CAGAGATTGGTCAAAGGACA+TGG 0.483037 1_1:+50825304 Msa0026780:CDS
CCCAACCAGCATCATTATTG+TGG 0.485486 1_1:-50825704 None:intergenic
TTTGAACGGCGGTGGTGCAC+CGG 0.486910 1_1:+50823899 Msa0026780:CDS
AGCAGCGTTGGTGTTATACT+TGG 0.487190 1_1:-50823673 None:intergenic
ATTTAATTATCACAGGGGAT+TGG 0.494169 1_1:+50824285 Msa0026780:intron
AGTCGCCGGAGTAATGATTC+CGG 0.494324 1_1:+50823804 Msa0026780:CDS
AAGGACATGGGGTTTAATGA+AGG 0.494662 1_1:+50825317 Msa0026780:CDS
TCATCTAATAAGAAAGCTGC+TGG 0.498028 1_1:+50825777 Msa0026780:CDS
TCAAAGGGAAGGCCGCCGAT+GGG 0.498527 1_1:+50823777 Msa0026780:CDS
AGTGTAGAAGGATGGAAATG+AGG 0.500129 1_1:-50823344 None:intergenic
CAGTCCTTTCACATGCATAG+TGG 0.500156 1_1:-50826593 None:intergenic
GATAGGGAAGGAGGTTCGGG+TGG 0.503166 1_1:+50823840 Msa0026780:CDS
GCCGGAGTAATGATTCCGGC+TGG 0.503400 1_1:+50823808 Msa0026780:CDS
GGTGGGAAGTATGTTGGGTT+CGG 0.503415 1_1:+50824053 Msa0026780:CDS
GCTGCTAATGCTGTTCAGAC+TGG 0.505364 1_1:+50824333 Msa0026780:CDS
GGAAGGCGGTTATGATCAAA+AGG 0.509923 1_1:+50825245 Msa0026780:CDS
CGGGTTGGGATTGAAGGTCC+CGG 0.513419 1_1:-50823404 None:intergenic
TCGCAAGGTGGGAAGTATGT+TGG 0.513815 1_1:+50824047 Msa0026780:CDS
CCCACAATAATGATGCTGGT+TGG 0.515926 1_1:+50825703 Msa0026780:CDS
GACTTCCACCGTCGCAAGGT+GGG 0.517045 1_1:+50824036 Msa0026780:CDS
TTTGGCTTCACAGAAGGTTG+AGG 0.518131 1_1:+50825350 Msa0026780:CDS
CAATTGGAAGCTTCTGCGGC+GGG 0.519075 1_1:+50823960 Msa0026780:CDS
CTTTGTCGGAAGGTCGGTCG+TGG 0.519720 1_1:+50823721 Msa0026780:CDS
CCAACCAGCATCATTATTGT+GGG 0.519854 1_1:-50825703 None:intergenic
ACTCAAAAGACATCAGAGAT+TGG 0.520352 1_1:+50825291 Msa0026780:CDS
ATGGGAAATCAGATGACGCT+TGG 0.522747 1_1:+50825805 Msa0026780:CDS
GATCCGTCACCATGGATGCT+TGG 0.527744 1_1:+50823553 Msa0026780:CDS
GATTTCGGACCAAGCATCCA+TGG 0.529426 1_1:-50823562 None:intergenic
CCGGCTGGGATGATTGGGAT+AGG 0.534746 1_1:+50823823 Msa0026780:CDS
TCGACGCAGATCTTGTTGCC+GGG 0.535740 1_1:-50823423 None:intergenic
ACGATAAACTGAAGCAGCGT+TGG 0.536105 1_1:-50823685 None:intergenic
GAGGATGAAGTGTAGAAGGA+TGG 0.537467 1_1:-50823352 None:intergenic
GAACTGCTTATTCAACATCA+AGG 0.544748 1_1:-50826920 None:intergenic
CTTTCGGAATGATGACATGC+AGG 0.544817 1_1:+50826548 Msa0026780:three_prime_UTR
TTCAGGCTTTGTCGGAAGGT+CGG 0.544881 1_1:+50823715 Msa0026780:CDS
CTCCGGCGACTCTGCCCCAT+CGG 0.545912 1_1:-50823792 None:intergenic
TTTAGGAATTTGAACGGCGG+TGG 0.547735 1_1:+50823891 Msa0026780:CDS
GCTCCCCACAATAATGATGC+TGG 0.549107 1_1:+50825699 Msa0026780:CDS
GTATTCTATTCCGAAGGAAA+CGG 0.550054 1_1:+50823641 Msa0026780:CDS
TGTGGATTGCTCCTCTGTGA+AGG 0.550251 1_1:-50824089 None:intergenic
TTGCTCCTCTGTGAAGGCAT+CGG 0.551923 1_1:-50824083 None:intergenic
CTCGAGACTGGTAATGCGGA+TGG 0.554512 1_1:-50826494 None:intergenic
GCTTCTGCGGCGGGTAAAGA+GGG 0.555155 1_1:+50823969 Msa0026780:CDS
CAATGGAACAATCTCGAGAC+TGG 0.558227 1_1:-50826506 None:intergenic
AAATGAGGGAGACAGACGTT+GGG 0.558815 1_1:-50823329 None:intergenic
CTTCATCCTCCGATCATCCA+TGG 0.559426 1_1:+50823365 Msa0026780:exon
AAACAATTCTTCCTGCACAT+AGG 0.561143 1_1:-50826661 None:intergenic
GCGTGATCCTCCGGTTGTGA+AGG 0.563730 1_1:+50823743 Msa0026780:CDS
TCCGTCGACCTCGATCTCGC+CGG 0.565057 1_1:-50823918 None:intergenic
ATCAGATGACGCTTGGACAG+GGG 0.565298 1_1:+50825812 Msa0026780:CDS
TGCCAAGTATTCTATTCCGA+AGG 0.565535 1_1:+50823635 Msa0026780:CDS
TCTTTGTTTCAGGTCAAGGA+AGG 0.567944 1_1:+50825228 Msa0026780:intron
TACTTCCCACCTTGCGACGG+TGG 0.568939 1_1:-50824041 None:intergenic
GGCGGAGAATGAGTCAAGGC+CGG 0.569646 1_1:+50824010 Msa0026780:CDS
GTCGCAATTGGAAGCTTCTG+CGG 0.569797 1_1:+50823956 Msa0026780:CDS
CAAAGGGAAGGCCGCCGATG+GGG 0.571024 1_1:+50823778 Msa0026780:CDS
AGGGAGACAGACGTTGGGTG+AGG 0.573300 1_1:-50823324 None:intergenic
GTGATGCCGCCATGGATGAT+CGG 0.575331 1_1:-50823374 None:intergenic
GATCATCCATGGCGGCATCA+CGG 0.576667 1_1:+50823376 Msa0026780:exon
AGAATTTAGGTTCAAAGGGA+AGG 0.577046 1_1:+50823766 Msa0026780:CDS
TCAACTCCTTATTCATCTGG+TGG 0.577122 1_1:+50825594 Msa0026780:CDS
CGGCTGGGATGATTGGGATA+GGG 0.577559 1_1:+50823824 Msa0026780:CDS
TCGGAATAGAATACTTGGCA+AGG 0.577709 1_1:-50823632 None:intergenic
TCCCAATCATCCCAAGAGCT+GGG 0.579490 1_1:-50825636 None:intergenic
TTCATGTGCTTAGAATGCTC+CGG 0.579995 1_1:+50823492 Msa0026780:CDS
GAAGGACTTCCACCGTCGCA+AGG 0.582983 1_1:+50824032 Msa0026780:CDS
GAGCCGCCGTGATGCCGCCA+TGG 0.583473 1_1:-50823382 None:intergenic
TGGGATAATGCAAAAGATGA+TGG 0.583815 1_1:+50825732 Msa0026780:CDS
GAGTTCCCAAAATGTTACAT+AGG 0.584773 1_1:-50826723 None:intergenic
GACGTTGGGTGAGGTGTGAG+AGG 0.584779 1_1:-50823315 None:intergenic
CCTATCCCAATCATCCCAGC+CGG 0.584873 1_1:-50823823 None:intergenic
CCGGAGTAATGATTCCGGCT+GGG 0.585313 1_1:+50823809 Msa0026780:CDS
TCAGATGACGCTTGGACAGG+GGG 0.587832 1_1:+50825813 Msa0026780:CDS
GAGGTTCGGGTGGTGATGTG+AGG 0.591884 1_1:+50823850 Msa0026780:CDS
GATGTGAGGAGTAAGTCGAC+GGG 0.593326 1_1:+50823864 Msa0026780:CDS
TCAAACTCTTGGGACGATTG+GGG 0.596473 1_1:+50825531 Msa0026780:CDS
AGGACATGGGGTTTAATGAA+GGG 0.599160 1_1:+50825318 Msa0026780:CDS
GTGGTGCACCGGCGAGATCG+AGG 0.600418 1_1:+50823910 Msa0026780:CDS
CCCAGCCGGAATCATTACTC+CGG 0.606336 1_1:-50823809 None:intergenic
CAGTGGGCATCAGTCTCCTA+CGG 0.607011 1_1:+50823465 Msa0026780:CDS
CTCTCAGAAGAATCCACAGT+GGG 0.607546 1_1:+50823449 Msa0026780:CDS
GCAATTGGAAGCTTCTGCGG+CGG 0.607693 1_1:+50823959 Msa0026780:CDS
CGGGACCTTCAATCCCAACC+CGG 0.609873 1_1:+50823405 Msa0026780:CDS
AAGCATCCATGGTGACGGAT+CGG 0.610332 1_1:-50823551 None:intergenic
TTGTTTCAGGTCAAGGAAGG+CGG 0.612416 1_1:+50825231 Msa0026780:intron
TTCAATCAAGGGAACAAAGG+AGG 0.615582 1_1:+50825453 Msa0026780:CDS
AGAGATTGGTCAAAGGACAT+GGG 0.615964 1_1:+50825305 Msa0026780:CDS
GGACATGGGGTTTAATGAAG+GGG 0.616409 1_1:+50825319 Msa0026780:CDS
GATTTCAATCAAGGGAACAA+AGG 0.616794 1_1:+50825450 Msa0026780:CDS
GGACCAAGCATCCATGGTGA+CGG 0.618778 1_1:-50823556 None:intergenic
CATGGTGACGGATCGGACGA+AGG 0.619426 1_1:-50823544 None:intergenic
CGGCGACTCTGCCCCATCGG+CGG 0.622822 1_1:-50823789 None:intergenic
TGATGTGAGGAGTAAGTCGA+CGG 0.623072 1_1:+50823863 Msa0026780:CDS
GAGAATGAGTCAAGGCCGGA+AGG 0.624456 1_1:+50824014 Msa0026780:CDS
CAATCTCGAGACTGGTAATG+CGG 0.626963 1_1:-50826498 None:intergenic
CTTCGTCCGATCCGTCACCA+TGG 0.629444 1_1:+50823545 Msa0026780:CDS
AAAACCACTATGCATGTGAA+AGG 0.630270 1_1:+50826589 Msa0026780:three_prime_UTR
GGACTTCCACCGTCGCAAGG+TGG 0.631829 1_1:+50824035 Msa0026780:CDS
ACATACTTCCCACCTTGCGA+CGG 0.631937 1_1:-50824044 None:intergenic
GATGATTGGGATAGGGAAGG+AGG 0.632481 1_1:+50823831 Msa0026780:CDS
AGACATCAGAGATTGGTCAA+AGG 0.632664 1_1:+50825298 Msa0026780:CDS
CAACTCCTTATTCATCTGGT+GGG 0.634524 1_1:+50825595 Msa0026780:CDS
GGACCACAAAGATTCTAGGA+AGG 0.638994 1_1:+50825656 Msa0026780:CDS
GAAATGAGGGAGACAGACGT+TGG 0.642852 1_1:-50823330 None:intergenic
ACTATCAGGATTTCAATCAA+GGG 0.645448 1_1:+50825442 Msa0026780:CDS
GAGATTGGTCAAAGGACATG+GGG 0.646826 1_1:+50825306 Msa0026780:CDS
GAAGAGAACAATCTTCATCA+GGG 0.647329 1_1:+50825490 Msa0026780:CDS
GGCGAGATCGAGGTCGACGG+AGG 0.649649 1_1:+50823920 Msa0026780:CDS
CAACCAGCATCATTATTGTG+GGG 0.653135 1_1:-50825702 None:intergenic
ACCGGCGAGATCGAGGTCGA+CGG 0.653631 1_1:+50823917 Msa0026780:CDS
TGGGATGATTGGGATAGGGA+AGG 0.657232 1_1:+50823828 Msa0026780:CDS
ATGACATGCAGGCAAAGCCA+TGG 0.658357 1_1:+50826559 Msa0026780:three_prime_UTR
AACTATGAGAGACACAACGA+AGG 0.658598 1_1:-50826945 None:intergenic
AGATGTGAACACCGAGACCA+CGG 0.664997 1_1:-50823521 None:intergenic
TAAGCACATGAAGATGCCGT+AGG 0.669663 1_1:-50823481 None:intergenic
AAATTCTCCTTCACAACCGG+AGG 0.674563 1_1:-50823750 None:intergenic
AGATGGCGGAGAATGAGTCA+AGG 0.685000 1_1:+50824006 Msa0026780:CDS
GACATGGGGTTTAATGAAGG+GGG 0.697882 1_1:+50825320 Msa0026780:CDS
ATGTGAGGAGTAAGTCGACG+GGG 0.706562 1_1:+50823865 Msa0026780:CDS
TAGGAGACTGATGCCCACTG+TGG 0.710667 1_1:-50823462 None:intergenic
ATGCCGCCATGGATGATCGG+AGG 0.718825 1_1:-50823371 None:intergenic
CATCCATGGCGGCATCACGG+CGG 0.720125 1_1:+50823379 Msa0026780:exon
GAATGCTCCGGAAAACACCG+TGG 0.731228 1_1:+50823504 Msa0026780:CDS
TGTGAGGAGTAAGTCGACGG+GGG 0.747661 1_1:+50823866 Msa0026780:CDS
CATCCTCCGATCATCCATGG+CGG 0.756295 1_1:+50823368 Msa0026780:exon
CGACGGAGGATATTTATACG+CGG 0.767034 1_1:+50823934 Msa0026780:CDS
CTAGTCCGATGCCTTCACAG+AGG 0.771719 1_1:+50824078 Msa0026780:CDS
GCTCTCAGAAGAATCCACAG+TGG 0.805841 1_1:+50823448 Msa0026780:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GCAAAAAAAAAAAAAAAATT+AGG - chr1_1:50825208-50825227 None:intergenic 10.0%
!! TTATTGTATTTAATTATCAC+AGG + chr1_1:50824278-50824297 Msa0026780:intron 15.0%
!! TATTGTATTTAATTATCACA+GGG + chr1_1:50824279-50824298 Msa0026780:intron 15.0%
!!! TTATCAGTGTTATAATTTTT+TGG + chr1_1:50826093-50826112 Msa0026780:intron 15.0%
!!! TATCAGTGTTATAATTTTTT+GGG + chr1_1:50826094-50826113 Msa0026780:intron 15.0%
!! TTATCTATTAAGGAAATAAA+TGG + chr1_1:50826288-50826307 Msa0026780:intron 15.0%
!!! TGATATTTTTATTTCAAATG+AGG - chr1_1:50826452-50826471 None:intergenic 15.0%
!!! CATTTTTTTGATTTGGATTT+CGG - chr1_1:50823580-50823599 None:intergenic 20.0%
!! ATTGTATTTAATTATCACAG+GGG + chr1_1:50824280-50824299 Msa0026780:intron 20.0%
!!! TATTTGGATTATTTTGTTCA+AGG + chr1_1:50824379-50824398 Msa0026780:intron 20.0%
!!! ATTTGGATTATTTTGTTCAA+GGG + chr1_1:50824380-50824399 Msa0026780:intron 20.0%
!! GAAAATTTGTATTTGTTTCA+CGG + chr1_1:50824434-50824453 Msa0026780:intron 20.0%
!!! TTCATTTATTTCTTTTTAGC+TGG - chr1_1:50824743-50824762 None:intergenic 20.0%
!! AGCTAAAAAGAAATAAATGA+AGG + chr1_1:50824742-50824761 Msa0026780:intron 20.0%
!! GCTAAAAAGAAATAAATGAA+GGG + chr1_1:50824743-50824762 Msa0026780:intron 20.0%
!!! TGTATTGATAATGTATTTGT+GGG + chr1_1:50824798-50824817 Msa0026780:intron 20.0%
!! AAAAAGGAAAGAAACTAATT+GGG - chr1_1:50825067-50825086 None:intergenic 20.0%
!! AAAAAAGGAAAGAAACTAAT+TGG - chr1_1:50825068-50825087 None:intergenic 20.0%
!! TATACCAATTAATGCAAAAA+AGG - chr1_1:50825083-50825102 None:intergenic 20.0%
!! AAATTAGGCAAAGAAAAAAT+GGG - chr1_1:50825193-50825212 None:intergenic 20.0%
!! AAAATTAGGCAAAGAAAAAA+TGG - chr1_1:50825194-50825213 None:intergenic 20.0%
!! CATTTACAAAATGTTAAGTA+GGG - chr1_1:50825980-50825999 None:intergenic 20.0%
!! TCATTTACAAAATGTTAAGT+AGG - chr1_1:50825981-50826000 None:intergenic 20.0%
!!! TTTTTTCCTATGTAACATTT+TGG + chr1_1:50826717-50826736 Msa0026780:three_prime_UTR 20.0%
!!! TTTTTCCTATGTAACATTTT+GGG + chr1_1:50826718-50826737 Msa0026780:three_prime_UTR 20.0%
!!! CTTCTTAATTTAACTTTGTA+TGG + chr1_1:50826889-50826908 Msa0026780:three_prime_UTR 20.0%
! CGAAATCCAAATCAAAAAAA+TGG + chr1_1:50823578-50823597 Msa0026780:CDS 25.0%
!! GAAAAATAATCATTTTGCTG+TGG - chr1_1:50824110-50824129 None:intergenic 25.0%
!!! TTATTTTTCTGTTGTTTCAC+AGG + chr1_1:50824121-50824140 Msa0026780:CDS 25.0%
!!! TTTGGATTATTTTGTTCAAG+GGG + chr1_1:50824381-50824400 Msa0026780:intron 25.0%
! CAACAAATTGAACTAATACA+TGG - chr1_1:50824483-50824502 None:intergenic 25.0%
!! CTATTTGATAACACTTATCT+CGG - chr1_1:50824594-50824613 None:intergenic 25.0%
! TGACTGCATTAAAAAGATAA+CGG - chr1_1:50824704-50824723 None:intergenic 25.0%
!!! GTGTATTGATAATGTATTTG+TGG + chr1_1:50824797-50824816 Msa0026780:intron 25.0%
!!! TGATTTTATTTCAATTGCAC+TGG - chr1_1:50825027-50825046 None:intergenic 25.0%
!!! CTTTCCTTTTTTGCATTAAT+TGG + chr1_1:50825076-50825095 Msa0026780:intron 25.0%
!!! TTTTTTTTGCTCTTTGTTTC+AGG + chr1_1:50825218-50825237 Msa0026780:intron 25.0%
!!! GGATTTGATAACTTTTATGA+AGG + chr1_1:50825753-50825772 Msa0026780:CDS 25.0%
! TTTCCTTAATAGATAACCAA+CGG - chr1_1:50826284-50826303 None:intergenic 25.0%
!!! AATATCATAATTTTTGGACC+AGG + chr1_1:50826465-50826484 Msa0026780:intron 25.0%
!!! AGGAAGAATTGTTTTTTTTG+AGG + chr1_1:50826670-50826689 Msa0026780:three_prime_UTR 25.0%
! ACATAGGAAAAAATTACAAG+TGG - chr1_1:50826710-50826729 None:intergenic 25.0%
!! TAGAACTATATTTTTCCAAC+CGG - chr1_1:50826748-50826767 None:intergenic 25.0%
!!! ATTTACAAGTGTTGAAAGAA+AGG + chr1_1:50826769-50826788 Msa0026780:three_prime_UTR 25.0%
!!! CAGCTTCCATTTTTTTGATT+TGG - chr1_1:50823587-50823606 None:intergenic 30.0%
CAAATCAAAAAAATGGAAGC+TGG + chr1_1:50823585-50823604 Msa0026780:CDS 30.0%
! AAGGAGAATTTAGGTTCAAA+GGG + chr1_1:50823762-50823781 Msa0026780:CDS 30.0%
ATATGAATATGATGTTGTGC+CGG + chr1_1:50824204-50824223 Msa0026780:intron 30.0%
ATTTAATTATCACAGGGGAT+TGG + chr1_1:50824285-50824304 Msa0026780:intron 30.0%
CACAAAAGAGATTACTTCTA+AGG + chr1_1:50824356-50824375 Msa0026780:CDS 30.0%
!! GAGATTACTTCTAAGGTATT+TGG + chr1_1:50824363-50824382 Msa0026780:intron 30.0%
!! GGGAATTGATAATGTTAACT+TGG + chr1_1:50824818-50824837 Msa0026780:intron 30.0%
! TTATGACTTTTAGCATAGTG+TGG + chr1_1:50824957-50824976 Msa0026780:intron 30.0%
! TATGACTTTTAGCATAGTGT+GGG + chr1_1:50824958-50824977 Msa0026780:intron 30.0%
CAAATTCGACTACTAATAAC+TGG + chr1_1:50825391-50825410 Msa0026780:CDS 30.0%
CGAAATGAGAATGATAGAAA+TGG + chr1_1:50825417-50825436 Msa0026780:CDS 30.0%
TACTATCAGGATTTCAATCA+AGG + chr1_1:50825441-50825460 Msa0026780:CDS 30.0%
ACTATCAGGATTTCAATCAA+GGG + chr1_1:50825442-50825461 Msa0026780:CDS 30.0%
! AGATCATGCAAATCTTTTGT+AGG + chr1_1:50825856-50825875 Msa0026780:intron 30.0%
!! AGGCTTTCACATTTTATTTC+TGG + chr1_1:50825876-50825895 Msa0026780:intron 30.0%
GTTAAGTAGGGATAAAGATT+GGG - chr1_1:50825968-50825987 None:intergenic 30.0%
TGTTAAGTAGGGATAAAGAT+TGG - chr1_1:50825969-50825988 None:intergenic 30.0%
!!! GTGTTATAATTTTTTGGGAG+TGG + chr1_1:50826099-50826118 Msa0026780:intron 30.0%
TGGAATTATTTAACACGACA+AGG - chr1_1:50826152-50826171 None:intergenic 30.0%
TAAATAATTCCAGCTAAGTG+CGG + chr1_1:50826160-50826179 Msa0026780:intron 30.0%
! CAATTTTATAGGTTAGTGAG+TGG - chr1_1:50826257-50826276 None:intergenic 30.0%
TTAGATACTTTAACCTGACA+TGG + chr1_1:50826312-50826331 Msa0026780:intron 30.0%
ACAAAAATTACTGCAGCTTT+CGG + chr1_1:50826532-50826551 Msa0026780:three_prime_UTR 30.0%
!! GCTCTGAAGAATTAAGATTT+GGG - chr1_1:50826803-50826822 None:intergenic 30.0%
!! TGCTCTGAAGAATTAAGATT+TGG - chr1_1:50826804-50826823 None:intergenic 30.0%
ATCAAAAAAATGGAAGCTGG+TGG + chr1_1:50823588-50823607 Msa0026780:CDS 35.0%
TTCCTTCGGAATAGAATACT+TGG - chr1_1:50823640-50823659 None:intergenic 35.0%
GTATTCTATTCCGAAGGAAA+CGG + chr1_1:50823641-50823660 Msa0026780:CDS 35.0%
GTAACAATATCCGTTTCCTT+CGG - chr1_1:50823654-50823673 None:intergenic 35.0%
! GAAGGAGAATTTAGGTTCAA+AGG + chr1_1:50823761-50823780 Msa0026780:CDS 35.0%
! AGAATTTAGGTTCAAAGGGA+AGG + chr1_1:50823766-50823785 Msa0026780:CDS 35.0%
!! GGGGATTTTAGGAATTTGAA+CGG + chr1_1:50823885-50823904 Msa0026780:CDS 35.0%
!! GATTTTAGGAATTTGAACGG+CGG + chr1_1:50823888-50823907 Msa0026780:CDS 35.0%
!!! ATTTTTTGCGAAGAAGATGG+CGG + chr1_1:50823992-50824011 Msa0026780:CDS 35.0%
TATGAATATGATGTTGTGCC+GGG + chr1_1:50824205-50824224 Msa0026780:intron 35.0%
ACATGGTAGAAATATCCCTA+AGG - chr1_1:50824466-50824485 None:intergenic 35.0%
! GCTATTTGATAACACTGTAG+TGG - chr1_1:50824519-50824538 None:intergenic 35.0%
!!! TAGCTGTTTTTCGAATTCCA+CGG - chr1_1:50824550-50824569 None:intergenic 35.0%
TGATGTGTGATTGACAATAC+TGG + chr1_1:50824674-50824693 Msa0026780:intron 35.0%
TCAGAACAGTGGATGTTAAT+TGG + chr1_1:50824914-50824933 Msa0026780:intron 35.0%
ACAGTGGATGTTAATTGGAT+CGG + chr1_1:50824919-50824938 Msa0026780:intron 35.0%
! ATGACTTTTAGCATAGTGTG+GGG + chr1_1:50824959-50824978 Msa0026780:intron 35.0%
!! TGCTAACTGTTTGCTTTTCA+CGG + chr1_1:50825154-50825173 Msa0026780:intron 35.0%
ACTCAAAAGACATCAGAGAT+TGG + chr1_1:50825291-50825310 Msa0026780:CDS 35.0%
TGATAGAAATGGCTACTATC+AGG + chr1_1:50825428-50825447 Msa0026780:CDS 35.0%
GATTTCAATCAAGGGAACAA+AGG + chr1_1:50825450-50825469 Msa0026780:CDS 35.0%
AAAGGAGGTAATTCTTCTAC+TGG + chr1_1:50825468-50825487 Msa0026780:CDS 35.0%
GAAGAGAACAATCTTCATCA+GGG + chr1_1:50825490-50825509 Msa0026780:CDS 35.0%
AAACTCAAAGCTCAAACTCT+TGG + chr1_1:50825520-50825539 Msa0026780:CDS 35.0%
AACTCAAAGCTCAAACTCTT+GGG + chr1_1:50825521-50825540 Msa0026780:CDS 35.0%
AAGGGAGAACCTACTAATAA+AGG + chr1_1:50825570-50825589 Msa0026780:CDS 35.0%
! GGAGTTGATCCTTTATTAGT+AGG - chr1_1:50825582-50825601 None:intergenic 35.0%
TGGGATAATGCAAAAGATGA+TGG + chr1_1:50825732-50825751 Msa0026780:CDS 35.0%
TCATCTAATAAGAAAGCTGC+TGG + chr1_1:50825777-50825796 Msa0026780:CDS 35.0%
CCTCTCATATACACAGTTAT+AGG - chr1_1:50825908-50825927 None:intergenic 35.0%
CCTATAACTGTGTATATGAG+AGG + chr1_1:50825905-50825924 Msa0026780:intron 35.0%
ATATTAAAGGGAGAGATGAG+AGG - chr1_1:50826127-50826146 None:intergenic 35.0%
CACGACAAGGTCATATTAAA+GGG - chr1_1:50826139-50826158 None:intergenic 35.0%
ACACGACAAGGTCATATTAA+AGG - chr1_1:50826140-50826159 None:intergenic 35.0%
! TGACCGTTGGTTATCTATTA+AGG + chr1_1:50826278-50826297 Msa0026780:intron 35.0%
! GCAGTAATTTTTGTCACCAA+TGG - chr1_1:50826526-50826545 None:intergenic 35.0%
!! TCACATGCATAGTGGTTTTA+GGG - chr1_1:50826588-50826607 None:intergenic 35.0%
! TTCACATGCATAGTGGTTTT+AGG - chr1_1:50826589-50826608 None:intergenic 35.0%
AAAACCACTATGCATGTGAA+AGG + chr1_1:50826589-50826608 Msa0026780:three_prime_UTR 35.0%
AAACTCAAAAACCTATGTGC+AGG + chr1_1:50826650-50826669 Msa0026780:three_prime_UTR 35.0%
AAACAATTCTTCCTGCACAT+AGG - chr1_1:50826664-50826683 None:intergenic 35.0%
GAGTTCCCAAAATGTTACAT+AGG - chr1_1:50826726-50826745 None:intergenic 35.0%
!! ATGTAACATTTTGGGAACTC+CGG + chr1_1:50826726-50826745 Msa0026780:three_prime_UTR 35.0%
GAACTGCTTATTCAACATCA+AGG - chr1_1:50826923-50826942 None:intergenic 35.0%
GTGTAGAAGGATGGAAATGA+GGG - chr1_1:50823346-50823365 None:intergenic 40.0%
AGTGTAGAAGGATGGAAATG+AGG - chr1_1:50823347-50823366 None:intergenic 40.0%
TTCATGTGCTTAGAATGCTC+CGG + chr1_1:50823492-50823511 Msa0026780:CDS 40.0%
TCGGAATAGAATACTTGGCA+AGG - chr1_1:50823635-50823654 None:intergenic 40.0%
TGCCAAGTATTCTATTCCGA+AGG + chr1_1:50823635-50823654 Msa0026780:CDS 40.0%
CTGCTTCAGTTTATCGTGAT+CGG + chr1_1:50823691-50823710 Msa0026780:CDS 40.0%
AGTTTATCGTGATCGGATTC+AGG + chr1_1:50823698-50823717 Msa0026780:CDS 40.0%
CCTAAATTCTCCTTCACAAC+CGG - chr1_1:50823756-50823775 None:intergenic 40.0%
TATTTATACGCGGTCGCAAT+TGG + chr1_1:50823944-50823963 Msa0026780:CDS 40.0%
!!! GGGATTTTTTGCGAAGAAGA+TGG + chr1_1:50823989-50824008 Msa0026780:CDS 40.0%
CATGACTCGTCGAAAAACAA+AGG - chr1_1:50824166-50824185 None:intergenic 40.0%
TCAAATAGCTGATATAGCCG+TGG + chr1_1:50824530-50824549 Msa0026780:intron 40.0%
CTAGTATGCTATAGCACTAC+AGG - chr1_1:50824624-50824643 None:intergenic 40.0%
TAGAGGAAAGCTGTTGAATG+AGG + chr1_1:50824982-50825001 Msa0026780:intron 40.0%
AGCTGTTGAATGAGGTCAAT+AGG + chr1_1:50824990-50825009 Msa0026780:intron 40.0%
GCTGTTGAATGAGGTCAATA+GGG + chr1_1:50824991-50825010 Msa0026780:intron 40.0%
AGTACCTTCATGATTGTCTC+TGG + chr1_1:50825117-50825136 Msa0026780:intron 40.0%
!! GCTTTTCACGGTATTTTTGC+TGG + chr1_1:50825166-50825185 Msa0026780:intron 40.0%
! TTGCTCTTTGTTTCAGGTCA+AGG + chr1_1:50825224-50825243 Msa0026780:intron 40.0%
! TCTTTGTTTCAGGTCAAGGA+AGG + chr1_1:50825228-50825247 Msa0026780:intron 40.0%
! AGACATCAGAGATTGGTCAA+AGG + chr1_1:50825298-50825317 Msa0026780:CDS 40.0%
! AGAGATTGGTCAAAGGACAT+GGG + chr1_1:50825305-50825324 Msa0026780:CDS 40.0%
AAGGACATGGGGTTTAATGA+AGG + chr1_1:50825317-50825336 Msa0026780:CDS 40.0%
AGGACATGGGGTTTAATGAA+GGG + chr1_1:50825318-50825337 Msa0026780:CDS 40.0%
TTCAATCAAGGGAACAAAGG+AGG + chr1_1:50825453-50825472 Msa0026780:CDS 40.0%
GGAAGAGAACAATCTTCATC+AGG + chr1_1:50825489-50825508 Msa0026780:CDS 40.0%
ATTGGGGCCAAAAAGATAGT+TGG + chr1_1:50825547-50825566 Msa0026780:CDS 40.0%
GGCCAAAAAGATAGTTGGAA+GGG + chr1_1:50825552-50825571 Msa0026780:CDS 40.0%
! CTCCCTTCCAACTATCTTTT+TGG - chr1_1:50825557-50825576 None:intergenic 40.0%
GGATCAACTCCTTATTCATC+TGG + chr1_1:50825591-50825610 Msa0026780:CDS 40.0%
TCAACTCCTTATTCATCTGG+TGG + chr1_1:50825594-50825613 Msa0026780:CDS 40.0%
CAACTCCTTATTCATCTGGT+GGG + chr1_1:50825595-50825614 Msa0026780:CDS 40.0%
ATTGGGACCACAAAGATTCT+AGG + chr1_1:50825652-50825671 Msa0026780:CDS 40.0%
CTTCCTTCCTAGAATCTTTG+TGG - chr1_1:50825662-50825681 None:intergenic 40.0%
CAACCAGCATCATTATTGTG+GGG - chr1_1:50825705-50825724 None:intergenic 40.0%
CCAACCAGCATCATTATTGT+GGG - chr1_1:50825706-50825725 None:intergenic 40.0%
! CCACAATAATGATGCTGGTT+GGG + chr1_1:50825704-50825723 Msa0026780:CDS 40.0%
AAGAAAGCTGCTGGACATAA+TGG + chr1_1:50825786-50825805 Msa0026780:CDS 40.0%
AGAAAGCTGCTGGACATAAT+GGG + chr1_1:50825787-50825806 Msa0026780:CDS 40.0%
! TTTTGCCCAATCTCTTCTCT+TGG + chr1_1:50826006-50826025 Msa0026780:intron 40.0%
TGAAGTTCAGTGGTCATGTA+GGG - chr1_1:50826040-50826059 None:intergenic 40.0%
GGATTATTCCTGAAGTTCAG+TGG - chr1_1:50826050-50826069 None:intergenic 40.0%
CAGGAATAATCCATGCTACT+TGG + chr1_1:50826058-50826077 Msa0026780:intron 40.0%
! TAATCCATGCTACTTGGAGT+TGG + chr1_1:50826064-50826083 Msa0026780:intron 40.0%
ATTTCCAACTCCAAGTAGCA+TGG - chr1_1:50826071-50826090 None:intergenic 40.0%
!! AGAATGCTTCTAGCTTTGAG+TGG + chr1_1:50826183-50826202 Msa0026780:intron 40.0%
TGACATTGCAGACAAGTAGA+AGG + chr1_1:50826214-50826233 Msa0026780:intron 40.0%
GACATTGCAGACAAGTAGAA+GGG + chr1_1:50826215-50826234 Msa0026780:intron 40.0%
! CCAACGGTCAGCAATTTTAT+AGG - chr1_1:50826268-50826287 None:intergenic 40.0%
CCTATAAAATTGCTGACCGT+TGG + chr1_1:50826265-50826284 Msa0026780:intron 40.0%
!!! CACATGCATAGTGGTTTTAG+GGG - chr1_1:50826587-50826606 None:intergenic 40.0%
TGAGAGGAGTTTGGAGAAAG+TGG - chr1_1:50823302-50823321 None:intergenic 45.0%
AAATGAGGGAGACAGACGTT+GGG - chr1_1:50823332-50823351 None:intergenic 45.0%
GAGGATGAAGTGTAGAAGGA+TGG - chr1_1:50823355-50823374 None:intergenic 45.0%
ATCGGAGGATGAAGTGTAGA+AGG - chr1_1:50823359-50823378 None:intergenic 45.0%
CTCTCAGAAGAATCCACAGT+GGG + chr1_1:50823449-50823468 Msa0026780:CDS 45.0%
TAAGCACATGAAGATGCCGT+AGG - chr1_1:50823484-50823503 None:intergenic 45.0%
!! AGCAGCGTTGGTGTTATACT+TGG - chr1_1:50823676-50823695 None:intergenic 45.0%
ACGATAAACTGAAGCAGCGT+TGG - chr1_1:50823688-50823707 None:intergenic 45.0%
! TGATCGGATTCAGGCTTTGT+CGG + chr1_1:50823707-50823726 Msa0026780:CDS 45.0%
AAATTCTCCTTCACAACCGG+AGG - chr1_1:50823753-50823772 None:intergenic 45.0%
CCGGTTGTGAAGGAGAATTT+AGG + chr1_1:50823753-50823772 Msa0026780:CDS 45.0%
TGATGTGAGGAGTAAGTCGA+CGG + chr1_1:50823863-50823882 Msa0026780:CDS 45.0%
TTTAGGAATTTGAACGGCGG+TGG + chr1_1:50823891-50823910 Msa0026780:CDS 45.0%
CGACGGAGGATATTTATACG+CGG + chr1_1:50823934-50823953 Msa0026780:CDS 45.0%
! GGGGATTGGTAAGTTGTCAT+TGG + chr1_1:50824299-50824318 Msa0026780:intron 45.0%
TGTTTCACGGAATGCACCTT+AGG + chr1_1:50824447-50824466 Msa0026780:intron 45.0%
GTTTCACGGAATGCACCTTA+GGG + chr1_1:50824448-50824467 Msa0026780:intron 45.0%
TCTCGGCATATCACAAATCG+TGG - chr1_1:50824577-50824596 None:intergenic 45.0%
TTTAGCATAGTGTGGGGTAG+AGG + chr1_1:50824965-50824984 Msa0026780:intron 45.0%
GATGCCAGAGACAATCATGA+AGG - chr1_1:50825124-50825143 None:intergenic 45.0%
! TTGTTTCAGGTCAAGGAAGG+CGG + chr1_1:50825231-50825250 Msa0026780:intron 45.0%
GGAAGGCGGTTATGATCAAA+AGG + chr1_1:50825245-50825264 Msa0026780:CDS 45.0%
! CAGAGATTGGTCAAAGGACA+TGG + chr1_1:50825304-50825323 Msa0026780:CDS 45.0%
! GAGATTGGTCAAAGGACATG+GGG + chr1_1:50825306-50825325 Msa0026780:CDS 45.0%
GGACATGGGGTTTAATGAAG+GGG + chr1_1:50825319-50825338 Msa0026780:CDS 45.0%
GACATGGGGTTTAATGAAGG+GGG + chr1_1:50825320-50825339 Msa0026780:CDS 45.0%
! TTTGGCTTCACAGAAGGTTG+AGG + chr1_1:50825350-50825369 Msa0026780:CDS 45.0%
CTCAAACTCTTGGGACGATT+GGG + chr1_1:50825530-50825549 Msa0026780:CDS 45.0%
TCAAACTCTTGGGACGATTG+GGG + chr1_1:50825531-50825550 Msa0026780:CDS 45.0%
GGGCCAAAAAGATAGTTGGA+AGG + chr1_1:50825551-50825570 Msa0026780:CDS 45.0%
TACTCACAATCCCAGCTCTT+GGG + chr1_1:50825626-50825645 Msa0026780:CDS 45.0%
! GGACCACAAAGATTCTAGGA+AGG + chr1_1:50825656-50825675 Msa0026780:CDS 45.0%
CCCACAATAATGATGCTGGT+TGG + chr1_1:50825703-50825722 Msa0026780:CDS 45.0%
CCCAACCAGCATCATTATTG+TGG - chr1_1:50825707-50825726 None:intergenic 45.0%
! AATAATGATGCTGGTTGGGC+TGG + chr1_1:50825708-50825727 Msa0026780:CDS 45.0%
ATGGGAAATCAGATGACGCT+TGG + chr1_1:50825805-50825824 Msa0026780:CDS 45.0%
AAATCAGATGACGCTTGGAC+AGG + chr1_1:50825810-50825829 Msa0026780:CDS 45.0%
AATCAGATGACGCTTGGACA+GGG + chr1_1:50825811-50825830 Msa0026780:CDS 45.0%
CGAGACCAAGAGAAGAGATT+GGG - chr1_1:50826014-50826033 None:intergenic 45.0%
ACGAGACCAAGAGAAGAGAT+TGG - chr1_1:50826015-50826034 None:intergenic 45.0%
CTGAAGTTCAGTGGTCATGT+AGG - chr1_1:50826041-50826060 None:intergenic 45.0%
CTACATGACCACTGAACTTC+AGG + chr1_1:50826039-50826058 Msa0026780:intron 45.0%
!! TGCTTCTAGCTTTGAGTGGA+AGG + chr1_1:50826187-50826206 Msa0026780:intron 45.0%
!! TCTAGCTTTGAGTGGAAGGT+AGG + chr1_1:50826191-50826210 Msa0026780:intron 45.0%
CTGCATCATATGACCATGTC+AGG - chr1_1:50826328-50826347 None:intergenic 45.0%
TAATGCGGATGGATGAAACC+TGG - chr1_1:50826486-50826505 None:intergenic 45.0%
! CAATCTCGAGACTGGTAATG+CGG - chr1_1:50826501-50826520 None:intergenic 45.0%
CAATGGAACAATCTCGAGAC+TGG - chr1_1:50826509-50826528 None:intergenic 45.0%
CAGTCTCGAGATTGTTCCAT+TGG + chr1_1:50826507-50826526 Msa0026780:three_prime_UTR 45.0%
CTTTCGGAATGATGACATGC+AGG + chr1_1:50826548-50826567 Msa0026780:three_prime_UTR 45.0%
CAGTCCTTTCACATGCATAG+TGG - chr1_1:50826596-50826615 None:intergenic 45.0%
!! AACATTTTGGGAACTCCGGT+TGG + chr1_1:50826730-50826749 Msa0026780:three_prime_UTR 45.0%
!!! AATAAAAATATCATAATTTT+TGG + chr1_1:50826459-50826478 Msa0026780:intron 5.0%
GAAATGAGGGAGACAGACGT+TGG - chr1_1:50823333-50823352 None:intergenic 50.0%
CTTCATCCTCCGATCATCCA+TGG + chr1_1:50823365-50823384 Msa0026780:exon 50.0%
ATCGACGCAGATCTTGTTGC+CGG - chr1_1:50823427-50823446 None:intergenic 50.0%
GCTCTCAGAAGAATCCACAG+TGG + chr1_1:50823448-50823467 Msa0026780:CDS 50.0%
AGATGTGAACACCGAGACCA+CGG - chr1_1:50823524-50823543 None:intergenic 50.0%
!! AAGCATCCATGGTGACGGAT+CGG - chr1_1:50823554-50823573 None:intergenic 50.0%
GATTTCGGACCAAGCATCCA+TGG - chr1_1:50823565-50823584 None:intergenic 50.0%
! TTCAGGCTTTGTCGGAAGGT+CGG + chr1_1:50823715-50823734 Msa0026780:CDS 50.0%
AGTCGCCGGAGTAATGATTC+CGG + chr1_1:50823804-50823823 Msa0026780:CDS 50.0%
ATGATTCCGGCTGGGATGAT+TGG + chr1_1:50823817-50823836 Msa0026780:CDS 50.0%
TGATTCCGGCTGGGATGATT+GGG + chr1_1:50823818-50823837 Msa0026780:CDS 50.0%
TGGGATGATTGGGATAGGGA+AGG + chr1_1:50823828-50823847 Msa0026780:CDS 50.0%
GATGATTGGGATAGGGAAGG+AGG + chr1_1:50823831-50823850 Msa0026780:CDS 50.0%
TTGGGATAGGGAAGGAGGTT+CGG + chr1_1:50823836-50823855 Msa0026780:CDS 50.0%
GATGTGAGGAGTAAGTCGAC+GGG + chr1_1:50823864-50823883 Msa0026780:CDS 50.0%
ATGTGAGGAGTAAGTCGACG+GGG + chr1_1:50823865-50823884 Msa0026780:CDS 50.0%
! GTAAGTCGACGGGGGATTTT+AGG + chr1_1:50823874-50823893 Msa0026780:CDS 50.0%
GTCGCAATTGGAAGCTTCTG+CGG + chr1_1:50823956-50823975 Msa0026780:CDS 50.0%
!! AGATGGCGGAGAATGAGTCA+AGG + chr1_1:50824006-50824025 Msa0026780:CDS 50.0%
ACATACTTCCCACCTTGCGA+CGG - chr1_1:50824047-50824066 None:intergenic 50.0%
! TCGCAAGGTGGGAAGTATGT+TGG + chr1_1:50824047-50824066 Msa0026780:CDS 50.0%
! CGCAAGGTGGGAAGTATGTT+GGG + chr1_1:50824048-50824067 Msa0026780:CDS 50.0%
! GGTGGGAAGTATGTTGGGTT+CGG + chr1_1:50824053-50824072 Msa0026780:CDS 50.0%
! TTGCTCCTCTGTGAAGGCAT+CGG - chr1_1:50824086-50824105 None:intergenic 50.0%
! TGTGGATTGCTCCTCTGTGA+AGG - chr1_1:50824092-50824111 None:intergenic 50.0%
TGTGCGCGCATGCTTTATAG+TGG + chr1_1:50824232-50824251 Msa0026780:intron 50.0%
GCTGCTAATGCTGTTCAGAC+TGG + chr1_1:50824333-50824352 Msa0026780:CDS 50.0%
! ATCCACTGTTCTGAGCAACG+AGG - chr1_1:50824908-50824927 None:intergenic 50.0%
GGGTTTAATGAAGGGGGTCA+TGG + chr1_1:50825326-50825345 Msa0026780:CDS 50.0%
AATGAAGGGGGTCATGGCTT+TGG + chr1_1:50825332-50825351 Msa0026780:CDS 50.0%
!! CATGGCTTTGGCTTCACAGA+AGG + chr1_1:50825344-50825363 Msa0026780:CDS 50.0%
GCTCAAACTCTTGGGACGAT+TGG + chr1_1:50825529-50825548 Msa0026780:CDS 50.0%
GACTGCCCACCAGATGAATA+AGG - chr1_1:50825603-50825622 None:intergenic 50.0%
! TATTCATCTGGTGGGCAGTC+TGG + chr1_1:50825603-50825622 Msa0026780:CDS 50.0%
GTACTCACAATCCCAGCTCT+TGG + chr1_1:50825625-50825644 Msa0026780:CDS 50.0%
ATCCCAGCTCTTGGGATGAT+TGG + chr1_1:50825634-50825653 Msa0026780:CDS 50.0%
TCCCAGCTCTTGGGATGATT+GGG + chr1_1:50825635-50825654 Msa0026780:CDS 50.0%
TCCCAATCATCCCAAGAGCT+GGG - chr1_1:50825639-50825658 None:intergenic 50.0%
GCTCCCCACAATAATGATGC+TGG + chr1_1:50825699-50825718 Msa0026780:CDS 50.0%
ATCAGATGACGCTTGGACAG+GGG + chr1_1:50825812-50825831 Msa0026780:CDS 50.0%
AAGCATTCTCCGCACTTAGC+TGG - chr1_1:50826172-50826191 None:intergenic 50.0%
ATGACATGCAGGCAAAGCCA+TGG + chr1_1:50826559-50826578 Msa0026780:three_prime_UTR 50.0%
!!! TAGTGGTTTTAGGGGCACCA+TGG - chr1_1:50826579-50826598 None:intergenic 50.0%
GGTGAGGTGTGAGAGGAGTT+TGG - chr1_1:50823311-50823330 None:intergenic 55.0%
CATCCTCCGATCATCCATGG+CGG + chr1_1:50823368-50823387 Msa0026780:exon 55.0%
GTGATGCCGCCATGGATGAT+CGG - chr1_1:50823377-50823396 None:intergenic 55.0%
GATCATCCATGGCGGCATCA+CGG + chr1_1:50823376-50823395 Msa0026780:exon 55.0%
! TGTTGCCGGGTTGGGATTGA+AGG - chr1_1:50823413-50823432 None:intergenic 55.0%
GCAGATCTTGTTGCCGGGTT+GGG - chr1_1:50823421-50823440 None:intergenic 55.0%
TCGACGCAGATCTTGTTGCC+GGG - chr1_1:50823426-50823445 None:intergenic 55.0%
TAGGAGACTGATGCCCACTG+TGG - chr1_1:50823465-50823484 None:intergenic 55.0%
CAGTGGGCATCAGTCTCCTA+CGG + chr1_1:50823465-50823484 Msa0026780:CDS 55.0%
GAATGCTCCGGAAAACACCG+TGG + chr1_1:50823504-50823523 Msa0026780:CDS 55.0%
TCCGGAAAACACCGTGGTCT+CGG + chr1_1:50823510-50823529 Msa0026780:CDS 55.0%
! ACCGAGACCACGGTGTTTTC+CGG - chr1_1:50823514-50823533 None:intergenic 55.0%
GATCCGTCACCATGGATGCT+TGG + chr1_1:50823553-50823572 Msa0026780:CDS 55.0%
GGACCAAGCATCCATGGTGA+CGG - chr1_1:50823559-50823578 None:intergenic 55.0%
! CGGATTCAGGCTTTGTCGGA+AGG + chr1_1:50823711-50823730 Msa0026780:CDS 55.0%
CCCAGCCGGAATCATTACTC+CGG - chr1_1:50823812-50823831 None:intergenic 55.0%
CCGGAGTAATGATTCCGGCT+GGG + chr1_1:50823809-50823828 Msa0026780:CDS 55.0%
CCTATCCCAATCATCCCAGC+CGG - chr1_1:50823826-50823845 None:intergenic 55.0%
CGGCTGGGATGATTGGGATA+GGG + chr1_1:50823824-50823843 Msa0026780:CDS 55.0%
TGGGATAGGGAAGGAGGTTC+GGG + chr1_1:50823837-50823856 Msa0026780:CDS 55.0%
TGTGAGGAGTAAGTCGACGG+GGG + chr1_1:50823866-50823885 Msa0026780:CDS 55.0%
GCAATTGGAAGCTTCTGCGG+CGG + chr1_1:50823959-50823978 Msa0026780:CDS 55.0%
CAATTGGAAGCTTCTGCGGC+GGG + chr1_1:50823960-50823979 Msa0026780:CDS 55.0%
GAGAATGAGTCAAGGCCGGA+AGG + chr1_1:50824014-50824033 Msa0026780:CDS 55.0%
CTAGTCCGATGCCTTCACAG+AGG + chr1_1:50824078-50824097 Msa0026780:CDS 55.0%
TGCCTCGTTGCTCAGAACAG+TGG + chr1_1:50824903-50824922 Msa0026780:intron 55.0%
GTCCCAATCATCCCAAGAGC+TGG - chr1_1:50825640-50825659 None:intergenic 55.0%
TGGGGAGCTGATGCTTTAGC+TGG - chr1_1:50825687-50825706 None:intergenic 55.0%
TCAGATGACGCTTGGACAGG+GGG + chr1_1:50825813-50825832 Msa0026780:CDS 55.0%
ACAGGGGGTGGCTTTCTCTA+AGG + chr1_1:50825828-50825847 Msa0026780:CDS 55.0%
! CTCGAGACTGGTAATGCGGA+TGG - chr1_1:50826497-50826516 None:intergenic 55.0%
GACGTTGGGTGAGGTGTGAG+AGG - chr1_1:50823318-50823337 None:intergenic 60.0%
AGGGAGACAGACGTTGGGTG+AGG - chr1_1:50823327-50823346 None:intergenic 60.0%
ATGCCGCCATGGATGATCGG+AGG - chr1_1:50823374-50823393 None:intergenic 60.0%
! CGGGTTGGGATTGAAGGTCC+CGG - chr1_1:50823407-50823426 None:intergenic 60.0%
CGGGACCTTCAATCCCAACC+CGG + chr1_1:50823405-50823424 Msa0026780:CDS 60.0%
CGCAGATCTTGTTGCCGGGT+TGG - chr1_1:50823422-50823441 None:intergenic 60.0%
!! CATGGTGACGGATCGGACGA+AGG - chr1_1:50823547-50823566 None:intergenic 60.0%
CTTCGTCCGATCCGTCACCA+TGG + chr1_1:50823545-50823564 Msa0026780:CDS 60.0%
CTTTGTCGGAAGGTCGGTCG+TGG + chr1_1:50823721-50823740 Msa0026780:CDS 60.0%
GCGTGATCCTCCGGTTGTGA+AGG + chr1_1:50823743-50823762 Msa0026780:CDS 60.0%
TTCAAAGGGAAGGCCGCCGA+TGG + chr1_1:50823776-50823795 Msa0026780:CDS 60.0%
TCAAAGGGAAGGCCGCCGAT+GGG + chr1_1:50823777-50823796 Msa0026780:CDS 60.0%
GCCGGAGTAATGATTCCGGC+TGG + chr1_1:50823808-50823827 Msa0026780:CDS 60.0%
CCGGCTGGGATGATTGGGAT+AGG + chr1_1:50823823-50823842 Msa0026780:CDS 60.0%
GATAGGGAAGGAGGTTCGGG+TGG + chr1_1:50823840-50823859 Msa0026780:CDS 60.0%
! GAGGTTCGGGTGGTGATGTG+AGG + chr1_1:50823850-50823869 Msa0026780:CDS 60.0%
TTTGAACGGCGGTGGTGCAC+CGG + chr1_1:50823899-50823918 Msa0026780:CDS 60.0%
AGCTTCTGCGGCGGGTAAAG+AGG + chr1_1:50823968-50823987 Msa0026780:CDS 60.0%
GCTTCTGCGGCGGGTAAAGA+GGG + chr1_1:50823969-50823988 Msa0026780:CDS 60.0%
GGCGGAGAATGAGTCAAGGC+CGG + chr1_1:50824010-50824029 Msa0026780:CDS 60.0%
TGCGACGGTGGAAGTCCTTC+CGG - chr1_1:50824032-50824051 None:intergenic 60.0%
GAAGGACTTCCACCGTCGCA+AGG + chr1_1:50824032-50824051 Msa0026780:CDS 60.0%
GACTTCCACCGTCGCAAGGT+GGG + chr1_1:50824036-50824055 Msa0026780:CDS 60.0%
TACTTCCCACCTTGCGACGG+TGG - chr1_1:50824044-50824063 None:intergenic 60.0%
!! ATGATGCTGGTTGGGCTGGC+TGG + chr1_1:50825712-50825731 Msa0026780:CDS 60.0%
!! TGATGCTGGTTGGGCTGGCT+GGG + chr1_1:50825713-50825732 Msa0026780:CDS 60.0%
CATCCATGGCGGCATCACGG+CGG + chr1_1:50823379-50823398 Msa0026780:exon 65.0%
TCGGTCGTGGCGTGATCCTC+CGG + chr1_1:50823734-50823753 Msa0026780:CDS 65.0%
CAAAGGGAAGGCCGCCGATG+GGG + chr1_1:50823778-50823797 Msa0026780:CDS 65.0%
ACCGGCGAGATCGAGGTCGA+CGG + chr1_1:50823917-50823936 Msa0026780:CDS 65.0%
TCCGTCGACCTCGATCTCGC+CGG - chr1_1:50823921-50823940 None:intergenic 65.0%
GGACTTCCACCGTCGCAAGG+TGG + chr1_1:50824035-50824054 Msa0026780:CDS 65.0%
AGCATGCGCGCACACACACC+CGG - chr1_1:50824226-50824245 None:intergenic 65.0%
GATGACGCTTGGACAGGGGG+TGG + chr1_1:50825816-50825835 Msa0026780:CDS 65.0%
CTCCGGCGACTCTGCCCCAT+CGG - chr1_1:50823795-50823814 None:intergenic 70.0%
! GTGGTGCACCGGCGAGATCG+AGG + chr1_1:50823910-50823929 Msa0026780:CDS 70.0%
GGCGAGATCGAGGTCGACGG+AGG + chr1_1:50823920-50823939 Msa0026780:CDS 70.0%
GAGCCGCCGTGATGCCGCCA+TGG - chr1_1:50823385-50823404 None:intergenic 75.0%
TGGCGGCATCACGGCGGCTC+CGG + chr1_1:50823385-50823404 Msa0026780:CDS 75.0%
CGGCGACTCTGCCCCATCGG+CGG - chr1_1:50823792-50823811 None:intergenic 75.0%
CGCCGATGGGGCAGAGTCGC+CGG + chr1_1:50823790-50823809 Msa0026780:CDS 75.0%
! GGCGGCATCACGGCGGCTCC+GGG + chr1_1:50823386-50823405 Msa0026780:CDS 80.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 50823290 50826957 50823290 ID=Msa0026780;Name=Msa0026780
chr1_1 mRNA 50823290 50826957 50823290 ID=Msa0026780-mRNA-1;Parent=Msa0026780;Name=Msa0026780-mRNA-1;_AED=0.08;_eAED=0.08;_QI=94|1|1|1|0.66|0.5|4|472|481
chr1_1 exon 50823290 50824142 50823290 ID=Msa0026780-mRNA-1:exon:14746;Parent=Msa0026780-mRNA-1
chr1_1 exon 50824300 50824377 50824300 ID=Msa0026780-mRNA-1:exon:14747;Parent=Msa0026780-mRNA-1
chr1_1 exon 50825240 50825849 50825240 ID=Msa0026780-mRNA-1:exon:14748;Parent=Msa0026780-mRNA-1
chr1_1 exon 50826487 50826957 50826487 ID=Msa0026780-mRNA-1:exon:14749;Parent=Msa0026780-mRNA-1
chr1_1 five_prime_UTR 50823290 50823383 50823290 ID=Msa0026780-mRNA-1:five_prime_utr;Parent=Msa0026780-mRNA-1
chr1_1 CDS 50823384 50824142 50823384 ID=Msa0026780-mRNA-1:cds;Parent=Msa0026780-mRNA-1
chr1_1 CDS 50824300 50824377 50824300 ID=Msa0026780-mRNA-1:cds;Parent=Msa0026780-mRNA-1
chr1_1 CDS 50825240 50825848 50825240 ID=Msa0026780-mRNA-1:cds;Parent=Msa0026780-mRNA-1
chr1_1 three_prime_UTR 50825849 50825849 50825849 ID=Msa0026780-mRNA-1:three_prime_utr;Parent=Msa0026780-mRNA-1
chr1_1 three_prime_UTR 50826487 50826957 50826487 ID=Msa0026780-mRNA-1:three_prime_utr;Parent=Msa0026780-mRNA-1
Gene Sequence

>Msa0026780

ATGGCGGCATCACGGCGGCTCCGGGACCTTCAATCCCAACCCGGCAACAAGATCTGCGTCGATTGCTCTCAGAAGAATCCACAGTGGGCATCAGTCTCCTACGGCATCTTCATGTGCTTAGAATGCTCCGGAAAACACCGTGGTCTCGGTGTTCACATCTCCTTCGTCCGATCCGTCACCATGGATGCTTGGTCCGAAATCCAAATCAAAAAAATGGAAGCTGGTGGCAATGACAATCTCAACGCTTTCCTTGCCAAGTATTCTATTCCGAAGGAAACGGATATTGTTACCAAGTATAACACCAACGCTGCTTCAGTTTATCGTGATCGGATTCAGGCTTTGTCGGAAGGTCGGTCGTGGCGTGATCCTCCGGTTGTGAAGGAGAATTTAGGTTCAAAGGGAAGGCCGCCGATGGGGCAGAGTCGCCGGAGTAATGATTCCGGCTGGGATGATTGGGATAGGGAAGGAGGTTCGGGTGGTGATGTGAGGAGTAAGTCGACGGGGGATTTTAGGAATTTGAACGGCGGTGGTGCACCGGCGAGATCGAGGTCGACGGAGGATATTTATACGCGGTCGCAATTGGAAGCTTCTGCGGCGGGTAAAGAGGGATTTTTTGCGAAGAAGATGGCGGAGAATGAGTCAAGGCCGGAAGGACTTCCACCGTCGCAAGGTGGGAAGTATGTTGGGTTCGGATCTAGTCCGATGCCTTCACAGAGGAGCAATCCACAGCAAAATGATTATTTTTCTGTTGTTTCACAGGGGATTGGTAAGTTGTCATTGGTTGCTGCATCTGCTGCTAATGCTGTTCAGACTGGCACAAAAGAGATTACTTCTAAGGTCAAGGAAGGCGGTTATGATCAAAAGGTCAACGAAACTGTCACTGTTGTCACTCAAAAGACATCAGAGATTGGTCAAAGGACATGGGGTTTAATGAAGGGGGTCATGGCTTTGGCTTCACAGAAGGTTGAGGAGTACACGAAAGAAAACTCAAATTCGACTACTAATAACTGGCAACGAAATGAGAATGATAGAAATGGCTACTATCAGGATTTCAATCAAGGGAACAAAGGAGGTAATTCTTCTACTGGAAGAGAACAATCTTCATCAGGGCAATACAAAACTCAAAGCTCAAACTCTTGGGACGATTGGGGCCAAAAAGATAGTTGGAAGGGAGAACCTACTAATAAAGGATCAACTCCTTATTCATCTGGTGGGCAGTCTGGTACTCACAATCCCAGCTCTTGGGATGATTGGGACCACAAAGATTCTAGGAAGGAAGAACCAGCTAAAGCATCAGCTCCCCACAATAATGATGCTGGTTGGGCTGGCTGGGATAATGCAAAAGATGATGGATTTGATAACTTTTATGAAGGTTCATCTAATAAGAAAGCTGCTGGACATAATGGGAAATCAGATGACGCTTGGACAGGGGGTGGCTTTCTCTAA
Protein sequence

>Msa0026780

MAASRRLRDLQSQPGNKICVDCSQKNPQWASVSYGIFMCLECSGKHRGLGVHISFVRSVTMDAWSEIQIKKMEAGGNDNLNAFLAKYSIPKETDIVTKYNTNAASVYRDRIQALSEGRSWRDPPVVKENLGSKGRPPMGQSRRSNDSGWDDWDREGGSGGDVRSKSTGDFRNLNGGGAPARSRSTEDIYTRSQLEASAAGKEGFFAKKMAENESRPEGLPPSQGGKYVGFGSSPMPSQRSNPQQNDYFSVVSQGIGKLSLVAASAANAVQTGTKEITSKVKEGGYDQKVNETVTVVTQKTSEIGQRTWGLMKGVMALASQKVEEYTKENSNSTTNNWQRNENDRNGYYQDFNQGNKGGNSSTGREQSSSGQYKTQSSNSWDDWGQKDSWKGEPTNKGSTPYSSGGQSGTHNPSSWDDWDHKDSRKEEPAKASAPHNNDAGWAGWDNAKDDGFDNFYEGSSNKKAAGHNGKSDDAWTGGGFL*