AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0942080

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0942080 MtrunA17_Chr6g0458111 100.000 447 0 0 1 447 1 447 0.0 918
Msa0942080 MtrunA17_Chr6g0458091 100.000 447 0 0 1 447 1 447 0.0 918
Msa0942080 MtrunA17_Chr1g0200071 96.652 448 14 1 1 447 1 448 0.0 895
Msa0942080 MtrunA17_Chr1g0200091 96.652 448 14 1 1 447 1 448 0.0 895
Msa0942080 MtrunA17_Chr1g0200121 96.429 448 15 1 1 447 1 448 0.0 895
Msa0942080 MtrunA17_Chr4g0005781 95.302 447 21 0 1 447 1 447 0.0 891
Msa0942080 MtrunA17_Chr1g0150331 88.470 451 22 3 1 447 1 425 0.0 805
Msa0942080 MtrunA17_Chr1g0193591 81.336 434 81 0 1 434 1 434 0.0 739
Msa0942080 MtrunA17_Chr1g0204031 80.182 439 82 3 1 439 1 434 0.0 726
Msa0942080 MtrunA17_Chr1g0156421 78.802 434 92 0 1 434 1 434 0.0 724
Msa0942080 MtrunA17_Chr8g0340771 77.951 449 96 2 1 446 1 449 0.0 713
Msa0942080 MtrunA17_Chr5g0415391 71.537 397 113 0 39 435 1 397 0.0 591
Msa0942080 MtrunA17_Chr1g0196251 67.990 403 101 2 4 405 5 380 0.0 569
Msa0942080 MtrunA17_Chr8g0336511 78.287 327 70 1 1 326 66 392 0.0 541
Msa0942080 MtrunA17_Chr2g0319341 71.681 339 94 1 102 438 1 339 2.96e-180 510
Msa0942080 MtrunA17_Chr2g0298371 67.692 325 86 2 102 424 1 308 4.07e-159 452
Msa0942080 MtrunA17_Chr8g0340371 69.710 241 70 2 1 240 1 239 6.97e-118 344
Msa0942080 MtrunA17_Chr1g0210931 60.403 298 63 4 155 446 1 249 3.18e-114 335
Msa0942080 MtrunA17_Chr2g0318291 71.681 226 59 3 1 223 1 224 1.40e-112 330
Msa0942080 MtrunA17_Chr6g0483121 37.731 432 255 6 5 428 89 514 9.51e-97 300
Msa0942080 MtrunA17_Chr8g0392641 37.731 432 259 6 4 429 143 570 6.50e-92 289
Msa0942080 MtrunA17_Chr1g0204041 85.806 155 22 0 1 155 1 155 1.58e-90 272
Msa0942080 MtrunA17_Chr8g0380091 35.566 433 270 6 7 433 275 704 1.60e-90 289
Msa0942080 MtrunA17_Chr1g0200111 74.011 177 36 1 264 430 1 177 1.03e-85 259
Msa0942080 MtrunA17_Chr2g0318281 67.368 190 62 0 243 432 5 194 4.93e-83 254
Msa0942080 MtrunA17_Chr1g0156411 81.884 138 25 0 8 145 12 149 1.52e-78 240
Msa0942080 MtrunA17_Chr8g0340361 58.378 185 61 2 264 433 1 184 1.04e-64 206
Msa0942080 MtrunA17_Chr4g0026961 53.608 194 74 4 195 385 32 212 1.19e-57 189
Msa0942080 MtrunA17_Chr4g0026961 78.571 42 9 0 1 42 1 42 3.47e-13 68.6
Msa0942080 MtrunA17_Chr2g0298381 77.778 99 22 0 1 99 1 99 7.03e-48 159
Msa0942080 MtrunA17_Chr8g0341021 75.490 102 25 0 3 104 4 105 1.99e-47 158
Msa0942080 MtrunA17_Chr7g0259481 30.227 440 243 14 3 429 59 447 1.30e-45 164
Msa0942080 MtrunA17_Chr3g0116821 30.631 444 247 15 3 429 88 487 4.06e-42 155
Msa0942080 MtrunA17_Chr1g0211481 78.481 79 17 0 5 83 4 82 6.12e-36 128
Msa0942080 MtrunA17_Chr2g0319351 80.822 73 14 0 5 77 5 77 7.07e-35 124
Msa0942080 MtrunA17_Chr1g0200101 72.414 87 18 2 154 236 29 113 1.32e-34 125
Msa0942080 MtrunA17_Chr1g0200101 73.469 49 13 0 21 69 2 50 8.51e-17 76.3
Msa0942080 MtrunA17_Chr2g0287231 32.389 247 135 6 1 244 10 227 5.11e-31 119
Msa0942080 MtrunA17_Chr8g0341041 35.455 220 79 5 213 432 2 158 1.00e-28 110
Msa0942080 MtrunA17_Chr7g0261801 69.697 66 17 1 155 220 1 63 4.19e-24 95.5
Msa0942080 MtrunA17_Chr3g0130991 26.103 272 144 9 9 272 85 307 2.23e-12 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0942080 AT1G07920.1 95.516 446 20 0 1 446 1 446 0.0 890
Msa0942080 AT1G07940.4 95.516 446 20 0 1 446 1 446 0.0 890
Msa0942080 AT1G07940.1 95.516 446 20 0 1 446 1 446 0.0 890
Msa0942080 AT1G07940.2 95.516 446 20 0 1 446 1 446 0.0 890
Msa0942080 AT1G07940.3 95.516 446 20 0 1 446 1 446 0.0 890
Msa0942080 AT5G60390.3 95.516 446 20 0 1 446 1 446 0.0 890
Msa0942080 AT5G60390.1 95.516 446 20 0 1 446 1 446 0.0 890
Msa0942080 AT5G60390.2 95.516 446 20 0 1 446 1 446 0.0 890
Msa0942080 AT1G07930.1 95.516 446 20 0 1 446 1 446 0.0 890
Msa0942080 AT1G07930.2 98.824 255 3 0 1 255 1 255 0.0 530
Msa0942080 AT1G07930.2 90.517 116 11 0 331 446 254 369 1.84e-68 223
Msa0942080 AT1G18070.1 37.412 425 258 5 5 424 99 520 6.81e-94 293
Msa0942080 AT1G18070.2 37.412 425 258 5 5 424 99 520 6.81e-94 293
Msa0942080 AT1G18070.3 36.697 436 257 6 5 424 99 531 1.07e-90 285
Msa0942080 AT5G10630.1 35.765 425 265 5 7 426 239 660 1.90e-90 288
Msa0942080 AT5G10630.5 35.765 425 265 5 7 426 240 661 1.94e-90 288
Msa0942080 AT5G10630.2 35.765 425 265 5 7 426 240 661 1.94e-90 288
Msa0942080 AT5G10630.3 35.765 425 265 5 7 426 310 731 1.01e-89 288
Msa0942080 AT5G10630.4 35.765 425 265 5 7 426 315 736 1.14e-89 288
Msa0942080 AT1G35550.1 77.885 104 23 0 335 438 1 104 5.74e-54 176
Msa0942080 AT4G20360.1 30.594 438 255 10 3 429 75 474 1.30e-44 162
Msa0942080 AT4G20360.2 30.594 438 255 10 3 429 75 474 1.30e-44 162
Msa0942080 AT4G02930.1 29.977 437 249 13 3 429 63 452 2.06e-44 161
Msa0942080 AT2G31060.3 25.000 264 160 8 9 263 61 295 1.61e-12 70.1
Msa0942080 AT2G31060.2 24.615 260 162 7 9 263 61 291 2.26e-11 66.6
Msa0942080 AT5G08650.1 27.037 270 144 10 9 272 88 310 2.47e-11 66.2
Msa0942080 AT5G08650.2 27.037 270 144 10 9 272 88 310 2.74e-11 66.2

Find 156 sgRNAs with CRISPR-Local

Find 908 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCGGTATGGTTGTGACTTT+TGG 0.190241 6_3:+16317860 Msa0942080:CDS
GGGCTTGTCTGTGGGTCTCT+TGG 0.228126 6_3:-16317753 None:intergenic
CTTCTTCTTGGCAGCAGCTT+TGG 0.247525 6_3:-16318395 None:intergenic
GGCTTGTCTGTGGGTCTCTT+GGG 0.275199 6_3:-16317752 None:intergenic
TTTCTATAGGCAGCTATATA+AGG 0.276105 6_3:+16329393 Msa0942080:three_prime_UTR
GTCATTGGACATGTCGATTC+TGG 0.282744 6_3:+16317014 Msa0942080:CDS
GGTTTGATAATTTATGTCTA+TGG 0.286823 6_3:+16329514 Msa0942080:three_prime_UTR
CTTGATAGAGGCCTGCAATT+TGG 0.288183 6_3:+16329573 Msa0942080:three_prime_UTR
GTTCTGTAAGTTTCTAAAAC+TGG 0.293208 6_3:-16318513 None:intergenic
AAGATAACAAACTATTAAAA+AGG 0.305342 6_3:-16318451 None:intergenic
CCTCAGCTGAATCGAAATCT+AGG 0.309482 6_3:-16316013 None:intergenic
GGAGGGAGATCACTTCTTCT+TGG 0.339899 6_3:-16318407 None:intergenic
GCTCTCACTGAAGCTCTTCC+AGG 0.343392 6_3:+16317932 Msa0942080:CDS
TTGCAAGATGTTTACAAGAT+TGG 0.346171 6_3:+16317788 Msa0942080:CDS
GTCTCTTGGGCTCGTTGATC+TGG 0.347889 6_3:-16317739 None:intergenic
TTCATCAAGAACATGATTAC+TGG 0.350652 6_3:+16317272 Msa0942080:CDS
CATATCAACATTGTCGTCAT+TGG 0.354281 6_3:+16316999 Msa0942080:CDS
ATCACCATTCTTCAAGAACT+TGG 0.354818 6_3:-16318212 None:intergenic
GTTTACAAGATTGGTGGTAT+TGG 0.363154 6_3:+16317797 Msa0942080:CDS
GGCAGCAGCTTTGGTGACTT+TGG 0.372842 6_3:-16318386 None:intergenic
AAGTTGGCAGCTTCCTTGGC+AGG 0.382611 6_3:-16318037 None:intergenic
ACCGAGCCTTTGAGTACTTA+GGG 0.386970 6_3:-16317553 None:intergenic
ACCAGATCGCCTGTCGATCT+TGG 0.401564 6_3:-16318170 None:intergenic
TCACCTTCAAAACCGGAGAT+TGG 0.405248 6_3:-16317650 None:intergenic
AGTGAAGTTGGCAGCTTCCT+TGG 0.410082 6_3:-16318041 None:intergenic
AACTTGATAAGCCAAATTGC+AGG 0.414820 6_3:-16329584 None:intergenic
TGCAATTTGGCTTATCAAGT+TGG 0.419325 6_3:+16329586 Msa0942080:three_prime_UTR
TTCCTTGGCAGGGTCATCCT+TGG 0.427055 6_3:-16318026 None:intergenic
ATCCCATTCGTTCCAATCTC+CGG 0.427548 6_3:+16317638 Msa0942080:CDS
AAGCCTGAGGGGCTTGTCTG+TGG 0.432212 6_3:-16317762 None:intergenic
TCTGGAAAATCAACAACAAC+TGG 0.439902 6_3:+16317032 Msa0942080:CDS
AGCCTGAGGGGCTTGTCTGT+GGG 0.440652 6_3:-16317761 None:intergenic
CCGGTCTCAACACGTCCAAC+TGG 0.449484 6_3:-16317827 None:intergenic
CATGTTGTCACCTTCAAAAC+CGG 0.451540 6_3:-16317657 None:intergenic
GGCAGGGTCATCCTTGGAGT+TGG 0.452433 6_3:-16318020 None:intergenic
CTTAAAGCTGAGCGTGAAAG+AGG 0.453667 6_3:+16317167 Msa0942080:CDS
ATGAACCACCCTGGTCAGAT+TGG 0.454810 6_3:+16318079 Msa0942080:CDS
GGTCTCAACCACCATGGGCT+TGG 0.458699 6_3:-16318260 None:intergenic
CTCAACCACCATGGGCTTGG+TGG 0.468734 6_3:-16318257 None:intergenic
TTATTGATCATGCTTGATAG+AGG 0.470419 6_3:+16329561 Msa0942080:three_prime_UTR
CTGAATCGAAATCTAGGGTT+GGG 0.471832 6_3:-16316007 None:intergenic
TAAGGACTGCACAATCAGCC+TGG 0.473376 6_3:-16317301 None:intergenic
TTTGGTGACTTTGGCTCCAG+TGG 0.473646 6_3:-16318377 None:intergenic
ACCAAGATCGACAGGCGATC+TGG 0.474000 6_3:+16318169 Msa0942080:CDS
CAAGATGTTTACAAGATTGG+TGG 0.475647 6_3:+16317791 Msa0942080:CDS
AGTTTCATCCTACTTGAAGA+AGG 0.496964 6_3:+16317595 Msa0942080:CDS
TCCAAAAGTCACAACCATAC+CGG 0.497778 6_3:-16317861 None:intergenic
CATCAAGGCTGTGGAGAAGA+AGG 0.501366 6_3:+16318351 Msa0942080:CDS
CACCAACCTTGACTGGTACA+AGG 0.502465 6_3:+16317691 Msa0942080:CDS
TCATCCTACTTGAAGAAGGT+TGG 0.505639 6_3:+16317599 Msa0942080:CDS
GATCGACAGGCGATCTGGTA+AGG 0.506331 6_3:+16318174 Msa0942080:CDS
TACCGAGCCTTTGAGTACTT+AGG 0.511710 6_3:-16317554 None:intergenic
CACCCTGGTCAGATTGGAAA+CGG 0.512174 6_3:+16318085 Msa0942080:CDS
GACCCACAGACAAGCCCCTC+AGG 0.515484 6_3:+16317759 Msa0942080:CDS
TACAGAACTGGGTTCTTGAT+CGG 0.517099 6_3:+16318528 Msa0942080:three_prime_UTR
CTTGTACCAGTCAAGGTTGG+TGG 0.518944 6_3:-16317690 None:intergenic
AAACCGGAGATTGGAACGAA+TGG 0.520045 6_3:-16317641 None:intergenic
TTGGTGACTTTGGCTCCAGT+GGG 0.520107 6_3:-16318376 None:intergenic
ATCATTGACTCCACCACTGG+TGG 0.521304 6_3:+16317323 Msa0942080:CDS
AGAGGTCCACCAACCTTGAC+TGG 0.523105 6_3:+16317684 Msa0942080:CDS
GAGCCCAAGTTCTTGAAGAA+TGG 0.525810 6_3:+16318208 Msa0942080:CDS
TTGAATCCGACATTGTCTCC+TGG 0.526013 6_3:-16317950 None:intergenic
TCAACCACCATGGGCTTGGT+GGG 0.529820 6_3:-16318256 None:intergenic
AACCGGAGATTGGAACGAAT+GGG 0.531600 6_3:-16317640 None:intergenic
CAAATATAAATGATCATGAC+AGG 0.531759 6_3:+16329621 Msa0942080:three_prime_UTR
CTTATCATTGACTCCACCAC+TGG 0.532051 6_3:+16317320 Msa0942080:CDS
AGCGTTCATTCAAGTACGCA+TGG 0.534658 6_3:+16317132 Msa0942080:CDS
TTGATGAAATCACGATGTCC+TGG 0.536130 6_3:-16317257 None:intergenic
TGCACAGTCATTGATGCTCC+AGG 0.539947 6_3:+16317239 Msa0942080:CDS
TCACCATTCTTCAAGAACTT+GGG 0.540637 6_3:-16318211 None:intergenic
CCAAAAGTCACAACCATACC+GGG 0.540748 6_3:-16317860 None:intergenic
GATGACTTGGGAAGTGAAGT+TGG 0.546093 6_3:-16318053 None:intergenic
TCCCTTGTACCAGTCAAGGT+TGG 0.546130 6_3:-16317693 None:intergenic
AAGCGAGAAGAGCGTGCTCA+CGG 0.547764 6_3:-16317379 None:intergenic
CAGTGGTGGAGTCAATGATA+AGG 0.548349 6_3:-16317319 None:intergenic
TATCCGTTTCCAATCTGACC+AGG 0.548901 6_3:-16318088 None:intergenic
GCTGAATCGAAATCTAGGGT+TGG 0.550049 6_3:-16316008 None:intergenic
TTCTTGAAGAATGGTGATGC+TGG 0.554703 6_3:+16318217 Msa0942080:CDS
ACTGGGTTCTTGATCGGCGA+TGG 0.555494 6_3:+16318534 Msa0942080:three_prime_UTR
ATCTTGCAATGGAAGCCTGA+GGG 0.556985 6_3:-16317774 None:intergenic
CATACCGGGCTTCACAATAC+CGG 0.558131 6_3:-16317846 None:intergenic
ACCAACCTTGACTGGTACAA+GGG 0.559612 6_3:+16317692 Msa0942080:CDS
GTAACCAACCTTCTTCAAGT+AGG 0.562921 6_3:-16317603 None:intergenic
GCAAAGGTCTCAACCACCAT+GGG 0.563446 6_3:-16318265 None:intergenic
ATCTGGTAAGGAGATTGAAA+AGG 0.563892 6_3:+16318186 Msa0942080:CDS
AGTTGGCAGCTTCCTTGGCA+GGG 0.564600 6_3:-16318036 None:intergenic
GGTGGTTCATGATGATGACT+TGG 0.569890 6_3:-16318066 None:intergenic
AACTTGTTACCAAGATCGAC+AGG 0.569913 6_3:+16318161 Msa0942080:CDS
AGCTTCAAAACCACCAGTGG+TGG 0.571917 6_3:-16317333 None:intergenic
TTGGTCCCTTGTACCAGTCA+AGG 0.575920 6_3:-16317697 None:intergenic
AGCGAGAAGAGCGTGCTCAC+GGG 0.577686 6_3:-16317378 None:intergenic
GACTGTGCAGTAGTACTTGG+TGG 0.578462 6_3:-16317225 None:intergenic
TGTTAAGAATGTTGCTGTGA+AGG 0.579878 6_3:+16317973 Msa0942080:CDS
CATGATTACTGGAACCTCCC+AGG 0.581850 6_3:+16317283 Msa0942080:CDS
CTCAGCTGAATCGAAATCTA+GGG 0.584632 6_3:-16316012 None:intergenic
TCAAGAGCCTCAAGGAGAGT+TGG 0.584894 6_3:-16317716 None:intergenic
AACTTCAGTTGTCAAACCAG+TGG 0.589445 6_3:-16317885 None:intergenic
AATGACTGTGCAGTAGTACT+TGG 0.591989 6_3:-16317228 None:intergenic
GAAGCTGGTATCTCTAAGGA+TGG 0.592030 6_3:+16317350 Msa0942080:CDS
CCAGTTGGACGTGTTGAGAC+CGG 0.592088 6_3:+16317827 Msa0942080:CDS
ATCTTGTAAACATCTTGCAA+TGG 0.592677 6_3:-16317785 None:intergenic
GAGGTGTGGCAATCGAGCAC+TGG 0.595189 6_3:-16318115 None:intergenic
TTTGCTGAATATCCTCCACT+TGG 0.598309 6_3:+16318283 Msa0942080:CDS
GAAGAAGTGATCTCCCTCCA+TGG 0.599917 6_3:+16318411 Msa0942080:exon
GTGGAGAAGAAGGATCCCAC+TGG 0.600566 6_3:+16318361 Msa0942080:CDS
AAGGACTGCACAATCAGCCT+GGG 0.602280 6_3:-16317300 None:intergenic
GGTCACTTGATCTACAAGCT+AGG 0.604596 6_3:+16317053 Msa0942080:CDS
TGTGATCGAGAGATTTGAGA+AGG 0.608416 6_3:+16317091 Msa0942080:CDS
TGTTGGTGTCATCAAGGCTG+TGG 0.608422 6_3:+16318342 Msa0942080:CDS
GATGGTTCCCACCAAGCCCA+TGG 0.611182 6_3:+16318249 Msa0942080:CDS
CCCCTAAGTACTCAAAGGCT+CGG 0.611893 6_3:+16317552 Msa0942080:CDS
TTTCCACAAGGCAATATCGA+TGG 0.613258 6_3:-16317195 None:intergenic
GCGTTCATTCAAGTACGCAT+GGG 0.615188 6_3:+16317133 Msa0942080:CDS
ACTTCAGTTGTCAAACCAGT+GGG 0.615673 6_3:-16317884 None:intergenic
AGCAAAGGTCTCAACCACCA+TGG 0.617611 6_3:-16318266 None:intergenic
CTCCAAGGATGACCCTGCCA+AGG 0.619064 6_3:+16318024 Msa0942080:CDS
TTTCGTTGCATCCAACTCCA+AGG 0.619372 6_3:+16318009 Msa0942080:CDS
AGTTGCTGTTGGTGTCATCA+AGG 0.621005 6_3:+16318336 Msa0942080:CDS
AAGGTGACAACATGATTGAG+AGG 0.624581 6_3:+16317666 Msa0942080:CDS
GAGACCGGTATTGTGAAGCC+CGG 0.625104 6_3:+16317842 Msa0942080:CDS
AACAACTTGTGAAGTAACCA+TGG 0.627034 6_3:-16318428 None:intergenic
TCTTGCAATGGAAGCCTGAG+GGG 0.631058 6_3:-16317773 None:intergenic
CCTAGATTTCGATTCAGCTG+AGG 0.633164 6_3:+16316013 Msa0942080:five_prime_UTR
TGATCTGGTCAAGAGCCTCA+AGG 0.634180 6_3:-16317724 None:intergenic
GATGATCTGTTGTTGTAACA+AGG 0.635291 6_3:+16317421 Msa0942080:CDS
TGATGCTGGTATCATTAAGA+TGG 0.636151 6_3:+16318231 Msa0942080:CDS
ACTTGTGAAGTAACCATGGA+GGG 0.638442 6_3:-16318424 None:intergenic
GACTGCACAATCAGCCTGGG+AGG 0.640106 6_3:-16317297 None:intergenic
CACTTGATCTACAAGCTAGG+AGG 0.645428 6_3:+16317056 Msa0942080:CDS
TTACCATCGATATTGCCTTG+TGG 0.647445 6_3:+16317192 Msa0942080:CDS
GGTATTGGAACTGTGCCAGT+TGG 0.649080 6_3:+16317812 Msa0942080:CDS
GTCATCATCATGAACCACCC+TGG 0.650188 6_3:+16318070 Msa0942080:CDS
CCGAGCCTTTGAGTACTTAG+GGG 0.650338 6_3:-16317552 None:intergenic
GCTCTTCCAGGAGACAATGT+CGG 0.651488 6_3:+16317944 Msa0942080:CDS
AAACTTCACAGCAATGTGAG+AGG 0.653594 6_3:-16318134 None:intergenic
CATCTTGCAATGGAAGCCTG+AGG 0.654491 6_3:-16317775 None:intergenic
TACCACCCCTAAGTACTCAA+AGG 0.654719 6_3:+16317547 Msa0942080:CDS
AGCCTTTGAGTACTTAGGGG+TGG 0.655623 6_3:-16317549 None:intergenic
ACAGCAAAACGTCCAAGTGG+AGG 0.656142 6_3:-16318295 None:intergenic
ATGCGTCAAACAGTTGCTGT+TGG 0.665270 6_3:+16318325 Msa0942080:CDS
TCGGTACGATGAAATCGTGA+AGG 0.669066 6_3:+16317571 Msa0942080:CDS
ACCAGCTTCAAAACCACCAG+TGG 0.669846 6_3:-16317336 None:intergenic
TCACAGCAATGTGAGAGGTG+TGG 0.670228 6_3:-16318129 None:intergenic
AAGTGGAGGATATTCAGCAA+AGG 0.671437 6_3:-16318281 None:intergenic
CAAGGGACCAACTCTCCTTG+AGG 0.682171 6_3:+16317709 Msa0942080:CDS
CTGACAGCAAAACGTCCAAG+TGG 0.686824 6_3:-16318298 None:intergenic
CGTTTCCAATCTGACCAGGG+TGG 0.687081 6_3:-16318084 None:intergenic
ATCCGTTTCCAATCTGACCA+GGG 0.688739 6_3:-16318087 None:intergenic
TATCTCTCATTCTCTCTCTG+CGG 0.689161 6_3:+16315975 Msa0942080:five_prime_UTR
GTGGTTCATGATGATGACTT+GGG 0.690284 6_3:-16318065 None:intergenic
AACTTGTGAAGTAACCATGG+AGG 0.700696 6_3:-16318425 None:intergenic
GTCTGTTGAGATGCACCACG+AGG 0.705830 6_3:+16317910 Msa0942080:CDS
GCTGTGAAGGATCTCAAGCG+TGG 0.706441 6_3:+16317986 Msa0942080:CDS
GGTTCCCACCAAGCCCATGG+TGG 0.716413 6_3:+16318252 Msa0942080:CDS
GGTGGTCTCGAATTTCCACA+AGG 0.719757 6_3:-16317207 None:intergenic
GAGCTTCAGTGAGAGCCTCG+TGG 0.728674 6_3:-16317925 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTAATTTTTAAATTTTTTA+TGG - chr6_3:16323475-16323494 None:intergenic 0.0%
!!! TTATTTTTTAAATTTTTTTT+GGG - chr6_3:16323591-16323610 None:intergenic 0.0%
!!! TTTATTTTTTAAATTTTTTT+TGG - chr6_3:16323592-16323611 None:intergenic 0.0%
!! AAATTTAAAAAATAAATTAT+AGG + chr6_3:16323596-16323615 Msa0942080:intron 0.0%
!! TTTGATTAAGTAATTTAATT+AGG + chr6_3:16316371-16316390 Msa0942080:intron 10.0%
!!! GATAATTGTAATTATTTTTT+TGG + chr6_3:16319494-16319513 Msa0942080:intron 10.0%
!!! TTTAGACAAATTATTTTAAT+GGG - chr6_3:16320537-16320556 None:intergenic 10.0%
!!! TTTTAGACAAATTATTTTAA+TGG - chr6_3:16320538-16320557 None:intergenic 10.0%
!!! TTTGATTTTTTTTTTTTTGA+AGG - chr6_3:16321574-16321593 None:intergenic 10.0%
!! ATTTGTAATGAATTATTAAA+GGG - chr6_3:16321874-16321893 None:intergenic 10.0%
!! AATTTGTAATGAATTATTAA+AGG - chr6_3:16321875-16321894 None:intergenic 10.0%
!! AAACAAAATTGAAATAAAAT+AGG + chr6_3:16322506-16322525 Msa0942080:intron 10.0%
!! ATAAATTAAAGTATGATTAT+AGG + chr6_3:16323413-16323432 Msa0942080:intron 10.0%
!!! ATTTTTAAATTTTTTATGGT+GGG - chr6_3:16323471-16323490 None:intergenic 10.0%
!!! AATTTTTAAATTTTTTATGG+TGG - chr6_3:16323472-16323491 None:intergenic 10.0%
!!! TATATTATAGTTTATTTTAG+TGG + chr6_3:16323920-16323939 Msa0942080:intron 10.0%
!!! TGATTTTTATATTATCAAAT+AGG + chr6_3:16324211-16324230 Msa0942080:intron 10.0%
!! AATAAAAATATATAATCGTT+TGG + chr6_3:16324321-16324340 Msa0942080:intron 10.0%
!! TTTGTAAAAAAAAAAATATG+TGG + chr6_3:16324961-16324980 Msa0942080:intron 10.0%
!! TTGTAAAAAAAAAAATATGT+GGG + chr6_3:16324962-16324981 Msa0942080:intron 10.0%
!!! CTTTATTTTTATTAAATGTA+AGG + chr6_3:16325822-16325841 Msa0942080:intron 10.0%
!!! ATGTTTTTATTGTTTGATTA+TGG + chr6_3:16316416-16316435 Msa0942080:intron 15.0%
!! TTTCGTTTATATGATTAAAA+GGG + chr6_3:16316472-16316491 Msa0942080:intron 15.0%
!! AAGATAACAAACTATTAAAA+AGG - chr6_3:16318454-16318473 None:intergenic 15.0%
!! TTAACAATTAAAACCAAAAA+CGG - chr6_3:16318562-16318581 None:intergenic 15.0%
!! TATAATTTACAAAGAAAATG+AGG + chr6_3:16319722-16319741 Msa0942080:intron 15.0%
!!! AGTAGAATTTTATGAAAAAA+TGG - chr6_3:16320260-16320279 None:intergenic 15.0%
!!! TTAGACAAATTATTTTAATG+GGG - chr6_3:16320536-16320555 None:intergenic 15.0%
!! ATAAAGATAATTAAGAACTT+TGG + chr6_3:16320626-16320645 Msa0942080:intron 15.0%
!! ATTATTTAATTCTGATCTAA+TGG - chr6_3:16321393-16321412 None:intergenic 15.0%
!! TTACTTAATTGTAAAAATCT+GGG - chr6_3:16321634-16321653 None:intergenic 15.0%
!!! GTTTATGTTTATTGAATTTT+TGG - chr6_3:16321679-16321698 None:intergenic 15.0%
!!! AAACATGATATTTGAATTTT+CGG + chr6_3:16321695-16321714 Msa0942080:intron 15.0%
!!! GTTTATAGTTTTAGATTTAA+TGG - chr6_3:16322066-16322085 None:intergenic 15.0%
!! ATTTATGGTAAAAAAAATGA+AGG + chr6_3:16322124-16322143 Msa0942080:intron 15.0%
!!! TTTGTTTGATTTATTAAAAG+AGG - chr6_3:16323378-16323397 None:intergenic 15.0%
!!! TAATGAAAATATGTTCATTT+TGG + chr6_3:16323491-16323510 Msa0942080:intron 15.0%
!!! AATGAAAATATGTTCATTTT+GGG + chr6_3:16323492-16323511 Msa0942080:intron 15.0%
!!! TTTTTTAAATTTTTTTTGGG+TGG - chr6_3:16323588-16323607 None:intergenic 15.0%
!!! GAATTATGAAACTTTTTTTA+TGG - chr6_3:16323782-16323801 None:intergenic 15.0%
!! AAAGAAATTAAAAAACAAAC+TGG + chr6_3:16324624-16324643 Msa0942080:intron 15.0%
!!! ATTCAAATATTTTAACATCA+AGG + chr6_3:16324649-16324668 Msa0942080:intron 15.0%
!! AAAAAAAAGTTCAAAAATGA+TGG - chr6_3:16325006-16325025 None:intergenic 15.0%
!!! AATATTCTAACATTTACTTT+TGG - chr6_3:16326131-16326150 None:intergenic 15.0%
!!! ATCTATTTGATGATTTTGTT+CGG + chr6_3:16316111-16316130 Msa0942080:intron 20.0%
!! TATAATACTGTGATTGTAAT+TGG + chr6_3:16316448-16316467 Msa0942080:intron 20.0%
!! ATAATACTGTGATTGTAATT+GGG + chr6_3:16316449-16316468 Msa0942080:intron 20.0%
!! GTTTCGTTTATATGATTAAA+AGG + chr6_3:16316471-16316490 Msa0942080:intron 20.0%
!!! GGTTTATGATTTTTCATAAT+AGG + chr6_3:16316541-16316560 Msa0942080:intron 20.0%
!!! TCTGTTTTATTGATTACATT+TGG + chr6_3:16316626-16316645 Msa0942080:intron 20.0%
!!! CTGTTTTATTGATTACATTT+GGG + chr6_3:16316627-16316646 Msa0942080:intron 20.0%
!!! TGTTTTATTGATTACATTTG+GGG + chr6_3:16316628-16316647 Msa0942080:intron 20.0%
!! TACTCTTATGTTATTGAATT+TGG + chr6_3:16316654-16316673 Msa0942080:intron 20.0%
!! TTTCAATTATTTGTTTCAGA+TGG + chr6_3:16317520-16317539 Msa0942080:intron 20.0%
!! AATAACAAAAAACTAAGACA+CGG - chr6_3:16318479-16318498 None:intergenic 20.0%
!! TAAAACTGGAAAAATAAAAC+TGG - chr6_3:16318502-16318521 None:intergenic 20.0%
!!! AACCTTTTATTTTATCTCTA+TGG + chr6_3:16318685-16318704 Msa0942080:intron 20.0%
!! AACCATAGAGATAAAATAAA+AGG - chr6_3:16318690-16318709 None:intergenic 20.0%
!! AGTTTAAATAATCAAGTACA+TGG + chr6_3:16318820-16318839 Msa0942080:intron 20.0%
!!! TTAATGTGTAATTTGTGTTT+GGG + chr6_3:16319937-16319956 Msa0942080:intron 20.0%
!!! TTGATCTTTAATTTGTTGAA+TGG + chr6_3:16320395-16320414 Msa0942080:intron 20.0%
!! AAATCCACATGTTAAATTAA+AGG + chr6_3:16320752-16320771 Msa0942080:intron 20.0%
!! TCTATTCAAAATTACTTTAG+TGG + chr6_3:16321177-16321196 Msa0942080:intron 20.0%
!! CTTACTTAATTGTAAAAATC+TGG - chr6_3:16321635-16321654 None:intergenic 20.0%
!!! TGTTTATTGAATTTTTGGTT+GGG - chr6_3:16321674-16321693 None:intergenic 20.0%
!!! ATGTTTATTGAATTTTTGGT+TGG - chr6_3:16321675-16321694 None:intergenic 20.0%
!!! ATATAGATTTGTTTTTGTTC+AGG - chr6_3:16322012-16322031 None:intergenic 20.0%
!! ATAAACAAAATACACCTTAA+AGG + chr6_3:16322080-16322099 Msa0942080:intron 20.0%
!! AATTAAAGTATGATTATAGG+TGG + chr6_3:16323416-16323435 Msa0942080:intron 20.0%
!! AACTAAAAATGATGCAAAAT+TGG - chr6_3:16323527-16323546 None:intergenic 20.0%
!!! AATAAATTATAGGTGCATTT+TGG + chr6_3:16323606-16323625 Msa0942080:intron 20.0%
!!! ATAAATTATAGGTGCATTTT+GGG + chr6_3:16323607-16323626 Msa0942080:intron 20.0%
!!! GACTTTAAACAATTTTTCAA+CGG + chr6_3:16323631-16323650 Msa0942080:intron 20.0%
!!! GGAGTTTTACTAAAAATATA+GGG - chr6_3:16323849-16323868 None:intergenic 20.0%
!! AATACGATTAAAGAATACAT+TGG + chr6_3:16324262-16324281 Msa0942080:intron 20.0%
!! AAATTGATATCCAAAACTAT+AGG + chr6_3:16324377-16324396 Msa0942080:intron 20.0%
!!! ATTTCGGTTTGTATTATTAT+TGG + chr6_3:16324458-16324477 Msa0942080:intron 20.0%
!!! TTTCGGTTTGTATTATTATT+GGG + chr6_3:16324459-16324478 Msa0942080:intron 20.0%
!! ACATTTAATATGCAAAAGTT+AGG - chr6_3:16324499-16324518 None:intergenic 20.0%
!!! CAAATCAAAAGTTTGATTTA+TGG - chr6_3:16324532-16324551 None:intergenic 20.0%
!! ACTAATTAGATTGTAACTTT+CGG - chr6_3:16325127-16325146 None:intergenic 20.0%
!!! ATCTGTTTTATTTTATCCAT+GGG - chr6_3:16325516-16325535 None:intergenic 20.0%
!!! TATCTGTTTTATTTTATCCA+TGG - chr6_3:16325517-16325536 None:intergenic 20.0%
!!! ATTAATGGATACGTATTTAA+TGG + chr6_3:16325553-16325572 Msa0942080:intron 20.0%
!! TGAATTATTGTTTGTATTTG+AGG + chr6_3:16326664-16326683 Msa0942080:intron 20.0%
!!! TCATGATGTTGTTTATTAAT+TGG + chr6_3:16326690-16326709 Msa0942080:intron 20.0%
!!! TTCATGATGATTTTTGAAAT+TGG + chr6_3:16326772-16326791 Msa0942080:intron 20.0%
!!! TCTTTTTGTTGTTAATGATT+TGG + chr6_3:16326815-16326834 Msa0942080:intron 20.0%
!!! TTTTAAACTTGATGATGATT+TGG + chr6_3:16326932-16326951 Msa0942080:intron 20.0%
!! TAAATCAGTACCAAATATAT+TGG + chr6_3:16327089-16327108 Msa0942080:intron 20.0%
!! CAAAACATATCCAATATATT+TGG - chr6_3:16327102-16327121 None:intergenic 20.0%
!!! TTGATTAGATCTTATTTTCT+TGG + chr6_3:16327362-16327381 Msa0942080:intron 20.0%
!! CAAAAACTTGAAAATAAAAC+TGG - chr6_3:16329255-16329274 None:intergenic 20.0%
!!! TGTCGTTCATTTTTATAATT+TGG + chr6_3:16329493-16329512 Msa0942080:three_prime_UTR 20.0%
! TAATTATTGATAAGCTGAGT+TGG + chr6_3:16316721-16316740 Msa0942080:intron 25.0%
! TACACAATGAATTAGTTGTT+TGG + chr6_3:16316756-16316775 Msa0942080:intron 25.0%
!! TGAGTTACATATTCTGATTT+TGG + chr6_3:16317497-16317516 Msa0942080:intron 25.0%
!!! TTTTAGAAACTTACAGAACT+GGG + chr6_3:16318517-16318536 Msa0942080:three_prime_UTR 25.0%
! TAGTATACTCACTAATCATT+TGG - chr6_3:16318875-16318894 None:intergenic 25.0%
!!! ATTAGCCTTGGTAATTTTTT+TGG + chr6_3:16318990-16319009 Msa0942080:intron 25.0%
! AATGTCCAAAAAAATTACCA+AGG - chr6_3:16318998-16319017 None:intergenic 25.0%
! GCAATCACAATCATTAAAAA+GGG + chr6_3:16319410-16319429 Msa0942080:intron 25.0%
! CTTGTTCTTCAGTTTATATT+TGG - chr6_3:16319645-16319664 None:intergenic 25.0%
! AAGAGAAAGTAAACATAATG+CGG + chr6_3:16319767-16319786 Msa0942080:intron 25.0%
! TCACAAAAGTCGTTAAAAAA+TGG + chr6_3:16319840-16319859 Msa0942080:intron 25.0%
!! GTTAATGTGTAATTTGTGTT+TGG + chr6_3:16319936-16319955 Msa0942080:intron 25.0%
! AAAAAAATGAACCGTTGTAA+TGG + chr6_3:16320420-16320439 Msa0942080:intron 25.0%
!! TCAAGTTCAATATTTGAGAT+GGG + chr6_3:16320492-16320511 Msa0942080:intron 25.0%
! AAGATAATTAAGAACTTTGG+TGG + chr6_3:16320629-16320648 Msa0942080:intron 25.0%
!! TTTGAAATACCTCATCAAAT+GGG - chr6_3:16320658-16320677 None:intergenic 25.0%
!!! TTTTGAAATACCTCATCAAA+TGG - chr6_3:16320659-16320678 None:intergenic 25.0%
! AAATATTACTTACTACCTTG+AGG + chr6_3:16320694-16320713 Msa0942080:intron 25.0%
! ATGTTCAAACTGATATTTGT+TGG + chr6_3:16320845-16320864 Msa0942080:intron 25.0%
! TGTTCAAACTGATATTTGTT+GGG + chr6_3:16320846-16320865 Msa0942080:intron 25.0%
!!! CTTATTGAAGAAAGTATTAC+TGG - chr6_3:16321067-16321086 None:intergenic 25.0%
! GTAATACTTTCTTCAATAAG+TGG + chr6_3:16321067-16321086 Msa0942080:intron 25.0%
!!! AACATGTGTTGTTTAAAAGA+GGG - chr6_3:16321428-16321447 None:intergenic 25.0%
! GATGAATAATCCATATAAAC+AGG - chr6_3:16321467-16321486 None:intergenic 25.0%
!!! ATAGTTTTAGATTTAATGGC+AGG - chr6_3:16322062-16322081 None:intergenic 25.0%
! AAAATACACCTTAAAGGATT+TGG + chr6_3:16322086-16322105 Msa0942080:intron 25.0%
! CTGTGGATATTATAGATTTA+TGG + chr6_3:16322109-16322128 Msa0942080:intron 25.0%
! TTTAAATATACCATCCTAGT+GGG + chr6_3:16322598-16322617 Msa0942080:intron 25.0%
!!! TTTAGAAAGAAGGTTTTGAA+TGG - chr6_3:16322646-16322665 None:intergenic 25.0%
! AACCTTCTTTCTAAATCTAA+TGG + chr6_3:16322651-16322670 Msa0942080:intron 25.0%
! TAAAAAATTGTAGTCTCCTA+CGG + chr6_3:16322705-16322724 Msa0942080:intron 25.0%
! AAAATTCACACACATAAGTA+GGG - chr6_3:16322767-16322786 None:intergenic 25.0%
! AAAAATTCACACACATAAGT+AGG - chr6_3:16322768-16322787 None:intergenic 25.0%
!!! TTATGTGTGTGAATTTTTAG+TGG + chr6_3:16322770-16322789 Msa0942080:intron 25.0%
!! TATTTTCTCCTTTTGGTATT+GGG - chr6_3:16322926-16322945 None:intergenic 25.0%
!!! TTTGTTGTATTTTCTCCTTT+TGG - chr6_3:16322933-16322952 None:intergenic 25.0%
!!! AACGATCTTATTTTCTCTAA+TGG - chr6_3:16323251-16323270 None:intergenic 25.0%
!!! TTGCATCATTTTTAGTTTTC+AGG + chr6_3:16323530-16323549 Msa0942080:intron 25.0%
!! GTTTTACTAAAAATATAGGG+TGG - chr6_3:16323846-16323865 None:intergenic 25.0%
!! CGGAGTTTTACTAAAAATAT+AGG - chr6_3:16323850-16323869 None:intergenic 25.0%
!! AATTTTCACGTGATCATAAT+CGG - chr6_3:16323977-16323996 None:intergenic 25.0%
!!! AAAGAAGAGTTGATTTGATT+TGG + chr6_3:16324122-16324141 Msa0942080:intron 25.0%
! AAATATATAATCGTTTGGTC+CGG + chr6_3:16324326-16324345 Msa0942080:intron 25.0%
!! ACAGATAAAACCTATAGTTT+TGG - chr6_3:16324390-16324409 None:intergenic 25.0%
!!! AACTATAGGTTTTATCTGTA+TGG + chr6_3:16324391-16324410 Msa0942080:intron 25.0%
!!! GTATGGTTTTAATCTAAACA+TGG + chr6_3:16324408-16324427 Msa0942080:intron 25.0%
!!! TCATAACTTTTTCTTAGAAC+CGG - chr6_3:16324705-16324724 None:intergenic 25.0%
!! TTTTACTTATAGCATGAGTT+GGG - chr6_3:16325037-16325056 None:intergenic 25.0%
!!! GTTTTTTTGTAAACATCGAT+CGG - chr6_3:16325102-16325121 None:intergenic 25.0%
! AGTTACAATCTAATTAGTTG+AGG + chr6_3:16325129-16325148 Msa0942080:intron 25.0%
! GTTACAATCTAATTAGTTGA+GGG + chr6_3:16325130-16325149 Msa0942080:intron 25.0%
! TTACAATCTAATTAGTTGAG+GGG + chr6_3:16325131-16325150 Msa0942080:intron 25.0%
! AATACGTATCCATTAATTAG+CGG - chr6_3:16325550-16325569 None:intergenic 25.0%
! ATTCAGTTTAATAGCAAGTA+TGG - chr6_3:16325598-16325617 None:intergenic 25.0%
!!! TTTGTTGTTATCGTAATGTA+TGG + chr6_3:16325878-16325897 Msa0942080:intron 25.0%
! TATGATATGTATGTAGATGT+AGG + chr6_3:16326153-16326172 Msa0942080:intron 25.0%
! ATGATATGTATGTAGATGTA+GGG + chr6_3:16326154-16326173 Msa0942080:intron 25.0%
! TAGAGATGATGTATTTCATT+TGG + chr6_3:16326192-16326211 Msa0942080:intron 25.0%
! AGAGATGATGTATTTCATTT+GGG + chr6_3:16326193-16326212 Msa0942080:intron 25.0%
!! GTTTGTAAAATTGATGACAT+GGG - chr6_3:16326235-16326254 None:intergenic 25.0%
! ACAAACCTAAAACAAATTCA+AGG + chr6_3:16326249-16326268 Msa0942080:intron 25.0%
! CAAACCTAAAACAAATTCAA+GGG + chr6_3:16326250-16326269 Msa0942080:intron 25.0%
! TTCGGAATATGAAAATATCT+AGG + chr6_3:16326277-16326296 Msa0942080:intron 25.0%
!!! TGATTTTGTTTCAAGTTTGA+AGG + chr6_3:16326549-16326568 Msa0942080:intron 25.0%
!!! GATTTTGTTTCAAGTTTGAA+GGG + chr6_3:16326550-16326569 Msa0942080:intron 25.0%
! CTTATATGTATGTTGTAACA+TGG + chr6_3:16326735-16326754 Msa0942080:intron 25.0%
! CTGTTTGATTAGATGTTAAT+TGG + chr6_3:16326960-16326979 Msa0942080:intron 25.0%
! ACGGTTAAACAATACATTAA+TGG - chr6_3:16327016-16327035 None:intergenic 25.0%
! CTGATTTATTAGATCTTACA+TGG - chr6_3:16327077-16327096 None:intergenic 25.0%
!!! TTGTTGCTTTTCTATTAGAT+TGG + chr6_3:16327119-16327138 Msa0942080:intron 25.0%
! TGAATTATTCTCCGTAATTA+AGG + chr6_3:16327331-16327350 Msa0942080:intron 25.0%
! CAAAACAAAGACCTTAATTA+CGG - chr6_3:16327345-16327364 None:intergenic 25.0%
!! TATTAAATATGTTGAGTTGC+AGG + chr6_3:16328077-16328096 Msa0942080:intron 25.0%
!! TTTCAATATCTTGTTTCAGA+TGG + chr6_3:16328277-16328296 Msa0942080:intron 25.0%
!! TTGAGAACTTCATTTTCTAT+AGG + chr6_3:16329380-16329399 Msa0942080:three_prime_UTR 25.0%
!! GGTTTGATAATTTATGTCTA+TGG + chr6_3:16329514-16329533 Msa0942080:three_prime_UTR 25.0%
! CAAATATAAATGATCATGAC+AGG + chr6_3:16329621-16329640 Msa0942080:three_prime_UTR 25.0%
TCGATTTATGCTTGTAATCT+TGG + chr6_3:16316198-16316217 Msa0942080:intron 30.0%
CTATCATTTCAGACAAGAAT+CGG - chr6_3:16316338-16316357 None:intergenic 30.0%
TGTAACTAATAACAAGTGTC+TGG + chr6_3:16316520-16316539 Msa0942080:intron 30.0%
!!! ATTGCAGTTTTAAGACAACA+TGG + chr6_3:16316962-16316981 Msa0942080:intron 30.0%
!!! TTGCAGTTTTAAGACAACAT+GGG + chr6_3:16316963-16316982 Msa0942080:intron 30.0%
TTCATCAAGAACATGATTAC+TGG + chr6_3:16317272-16317291 Msa0942080:CDS 30.0%
ATCTTGTAAACATCTTGCAA+TGG - chr6_3:16317788-16317807 None:intergenic 30.0%
TTGCAAGATGTTTACAAGAT+TGG + chr6_3:16317788-16317807 Msa0942080:CDS 30.0%
!! GTTCTGTAAGTTTCTAAAAC+TGG - chr6_3:16318516-16318535 None:intergenic 30.0%
!!! GTTTTAGAAACTTACAGAAC+TGG + chr6_3:16318516-16318535 Msa0942080:three_prime_UTR 30.0%
TAAGAGTCTTGAGTTTCAAA+AGG + chr6_3:16318579-16318598 Msa0942080:intron 30.0%
ATATTGTCCTTGATTGTTTG+TGG + chr6_3:16318720-16318739 Msa0942080:intron 30.0%
! ATAGTTCCTGCAATTTTTCT+TGG + chr6_3:16318761-16318780 Msa0942080:intron 30.0%
! TAGTTCCTGCAATTTTTCTT+GGG + chr6_3:16318762-16318781 Msa0942080:intron 30.0%
!!! GTCTTTATGCATTTGTTTTG+AGG + chr6_3:16318791-16318810 Msa0942080:intron 30.0%
AAAGAAATTCACTACAGTCT+AGG + chr6_3:16318916-16318935 Msa0942080:intron 30.0%
TCTAATCTCTCTTAACTGTT+TGG + chr6_3:16319157-16319176 Msa0942080:intron 30.0%
ATGCATACTTTGCTTTGTAA+AGG - chr6_3:16319295-16319314 None:intergenic 30.0%
AACTGTTCAGTGTTGTATTA+TGG - chr6_3:16319318-16319337 None:intergenic 30.0%
GGCAATCACAATCATTAAAA+AGG + chr6_3:16319409-16319428 Msa0942080:intron 30.0%
!! GTTCAGTTGATTGATTTTGA+TGG + chr6_3:16319469-16319488 Msa0942080:three_prime_UTR 30.0%
! ATAATGGAAAGCTTTGATGT+TGG - chr6_3:16319609-16319628 None:intergenic 30.0%
TGGCATCACAACAAAAATAA+TGG - chr6_3:16319625-16319644 None:intergenic 30.0%
TTACAAAGAAAATGAGGTAG+TGG + chr6_3:16319728-16319747 Msa0942080:intron 30.0%
TGTTTACTTTCTCTTTGCTT+TGG - chr6_3:16319762-16319781 None:intergenic 30.0%
AGAGAAAGTAAACATAATGC+GGG + chr6_3:16319768-16319787 Msa0942080:intron 30.0%
TCTCACATGAATGTAATGTT+GGG - chr6_3:16320084-16320103 None:intergenic 30.0%
ATCTCACATGAATGTAATGT+TGG - chr6_3:16320085-16320104 None:intergenic 30.0%
AGTGGTTAGCAAAAATCATT+AGG + chr6_3:16320129-16320148 Msa0942080:intron 30.0%
CTCAAGTTCAATATTTGAGA+TGG + chr6_3:16320491-16320510 Msa0942080:intron 30.0%
! CTGTCCTTTAATTTAACATG+TGG - chr6_3:16320759-16320778 None:intergenic 30.0%
TCTTTATGCACAACAAGTAT+GGG - chr6_3:16320881-16320900 None:intergenic 30.0%
AATCTTTCCAACTAGAAGTA+TGG - chr6_3:16320919-16320938 None:intergenic 30.0%
TATCTAGAAATCAAGGATTG+TGG - chr6_3:16321008-16321027 None:intergenic 30.0%
! CAATCCTTGATTTCTAGATA+AGG + chr6_3:16321008-16321027 Msa0942080:intron 30.0%
TTTCTAGATAAGGATGCATA+AGG + chr6_3:16321018-16321037 Msa0942080:intron 30.0%
!! GAACATGTGTTGTTTAAAAG+AGG - chr6_3:16321429-16321448 None:intergenic 30.0%
TACATGGTATCCTGTTTATA+TGG + chr6_3:16321454-16321473 Msa0942080:intron 30.0%
!! TTAGATCTGCACTTTTGATT+TGG - chr6_3:16321494-16321513 None:intergenic 30.0%
!! ATTACGATATCGATTCTGTT+GGG - chr6_3:16321524-16321543 None:intergenic 30.0%
! TCTGGGCATATGATTTTATT+GGG - chr6_3:16321617-16321636 None:intergenic 30.0%
! ATCTGGGCATATGATTTTAT+TGG - chr6_3:16321618-16321637 None:intergenic 30.0%
ACCAAAAATATATGCTTGCT+GGG + chr6_3:16321740-16321759 Msa0942080:intron 30.0%
! AAGTGAAGACTTTTAGTCAA+TGG + chr6_3:16322147-16322166 Msa0942080:intron 30.0%
! AGTGAAGACTTTTAGTCAAT+GGG + chr6_3:16322148-16322167 Msa0942080:intron 30.0%
CACGTAATTCATGATACTAT+CGG + chr6_3:16322543-16322562 Msa0942080:intron 30.0%
ACGTAATTCATGATACTATC+GGG + chr6_3:16322544-16322563 Msa0942080:intron 30.0%
CACTAGGATGGTATATTTAA+AGG - chr6_3:16322599-16322618 None:intergenic 30.0%
CTTTAAATATACCATCCTAG+TGG + chr6_3:16322597-16322616 Msa0942080:intron 30.0%
AGCCATTAGATTTAGAAAGA+AGG - chr6_3:16322656-16322675 None:intergenic 30.0%
TTCTTTCTAAATCTAATGGC+TGG + chr6_3:16322655-16322674 Msa0942080:intron 30.0%
!! TTTTCTCCTTTGGTAGTTTT+CGG - chr6_3:16322889-16322908 None:intergenic 30.0%
! ATTTTCTCCTTTTGGTATTG+GGG - chr6_3:16322925-16322944 None:intergenic 30.0%
! GTATTTTCTCCTTTTGGTAT+TGG - chr6_3:16322927-16322946 None:intergenic 30.0%
TAGAGAAAATAAGATCGTTC+CGG + chr6_3:16323252-16323271 Msa0942080:intron 30.0%
! TTTTAGATCGACGAAATGAT+TGG - chr6_3:16323283-16323302 None:intergenic 30.0%
!!! AAATTTTTTATGGTGGGTTG+TGG - chr6_3:16323465-16323484 None:intergenic 30.0%
TGAAACATGTGCAAATTTGA+AGG - chr6_3:16323737-16323756 None:intergenic 30.0%
!! CTAGAAAAAAGTGTTTAGGT+GGG - chr6_3:16323946-16323965 None:intergenic 30.0%
TGATCACGTGAAAATTGATA+AGG + chr6_3:16323981-16324000 Msa0942080:intron 30.0%
GATCACGTGAAAATTGATAA+GGG + chr6_3:16323982-16324001 Msa0942080:intron 30.0%
ATGGAAAAAAAATGCACCAT+TGG + chr6_3:16324427-16324446 Msa0942080:intron 30.0%
ACCATTGGATTGAATCATTT+CGG + chr6_3:16324442-16324461 Msa0942080:intron 30.0%
GGTTTGTATTATTATTGGGT+TGG + chr6_3:16324463-16324482 Msa0942080:intron 30.0%
TATTCCATACTACATAGTTG+AGG + chr6_3:16324596-16324615 Msa0942080:intron 30.0%
ATTCCATACTACATAGTTGA+GGG + chr6_3:16324597-16324616 Msa0942080:intron 30.0%
! TAGAACCGGTCTATTTTATT+GGG - chr6_3:16324691-16324710 None:intergenic 30.0%
! TTAGAACCGGTCTATTTTAT+TGG - chr6_3:16324692-16324711 None:intergenic 30.0%
! CTTTTACTTATAGCATGAGT+TGG - chr6_3:16325038-16325057 None:intergenic 30.0%
CTCATGCTATAAGTAAAAGA+TGG + chr6_3:16325039-16325058 Msa0942080:intron 30.0%
TGGTTGTTCAATATACTCAT+TGG - chr6_3:16325169-16325188 None:intergenic 30.0%
!!! TAGCTCGTATTTTAGCATAA+TGG - chr6_3:16325189-16325208 None:intergenic 30.0%
ATGCTAAAATACGAGCTAAT+TGG + chr6_3:16325191-16325210 Msa0942080:intron 30.0%
TTACTAATGACCTATACTCA+CGG + chr6_3:16325404-16325423 Msa0942080:intron 30.0%
TTTAACTACCCGCTAATTAA+TGG + chr6_3:16325538-16325557 Msa0942080:intron 30.0%
ATACGTATCCATTAATTAGC+GGG - chr6_3:16325549-16325568 None:intergenic 30.0%
!! TAGGAAGTTGAAAGGTATTA+AGG - chr6_3:16325636-16325655 None:intergenic 30.0%
ATGTATTACGCTCCTTTAAA+AGG + chr6_3:16325710-16325729 Msa0942080:intron 30.0%
GTATCTTATACATATCCTCA+CGG - chr6_3:16326007-16326026 None:intergenic 30.0%
GTGAGGATATGTATAAGATA+CGG + chr6_3:16326006-16326025 Msa0942080:intron 30.0%
TAAATGGATATCAATGGATG+TGG - chr6_3:16326075-16326094 None:intergenic 30.0%
GAGATGTAAATGGATATCAA+TGG - chr6_3:16326081-16326100 None:intergenic 30.0%
!! CTTTTGGAAAAGAGTTTAGT+TGG - chr6_3:16326115-16326134 None:intergenic 30.0%
TGAAATACATCATCTCTACT+TGG - chr6_3:16326190-16326209 None:intergenic 30.0%
! GGTTTGTAAAATTGATGACA+TGG - chr6_3:16326236-16326255 None:intergenic 30.0%
GTGAGAGAATGAAGAAATTA+GGG - chr6_3:16326323-16326342 None:intergenic 30.0%
TGTGAGAGAATGAAGAAATT+AGG - chr6_3:16326324-16326343 None:intergenic 30.0%
ATCAAAGAGAAAGGAATCAA+AGG - chr6_3:16326438-16326457 None:intergenic 30.0%
ATAGATCGAATCAAAGAGAA+AGG - chr6_3:16326447-16326466 None:intergenic 30.0%
!!! GCTTTTTTCATGACTTTGTT+CGG + chr6_3:16326502-16326521 Msa0942080:intron 30.0%
CTGTTTGATTACATCTTAGT+TGG + chr6_3:16326843-16326862 Msa0942080:intron 30.0%
!!! TGATTTTGAGCTTGTTGATT+TGG + chr6_3:16326872-16326891 Msa0942080:intron 30.0%
CTGCTTGATTAGATCTTAAT+TGG + chr6_3:16326900-16326919 Msa0942080:intron 30.0%
TAGATCTTAATTGGTTAAGC+TGG + chr6_3:16326909-16326928 Msa0942080:intron 30.0%
!! CTGATTTGTTGTTTGCTTAA+TGG + chr6_3:16327387-16327406 Msa0942080:intron 30.0%
!!! ATTGCAGTTTTAAGACAACA+TGG + chr6_3:16316962-16316981 Msa0942080:intron 30.0%
!!! TTGCAGTTTTAAGACAACAT+GGG + chr6_3:16316963-16316982 Msa0942080:intron 30.0%
TTCATCAAGAACATGATTAC+TGG + chr6_3:16317272-16317291 Msa0942080:CDS 30.0%
!! TTATTTGCTGATTCTGACTT+TGG + chr6_3:16328165-16328184 Msa0942080:intron 30.0%
ATCTTGTAAACATCTTGCAA+TGG - chr6_3:16317788-16317807 None:intergenic 30.0%
TTGCAAGATGTTTACAAGAT+TGG + chr6_3:16317788-16317807 Msa0942080:CDS 30.0%
!! TCTTGTCTGTTTGATTTTGA+TGG + chr6_3:16329332-16329351 Msa0942080:intron 30.0%
TTTCTATAGGCAGCTATATA+AGG + chr6_3:16329393-16329412 Msa0942080:three_prime_UTR 30.0%
TAAAAATGAACGACAGAAAC+AGG - chr6_3:16329488-16329507 None:intergenic 30.0%
TTATTGATCATGCTTGATAG+AGG + chr6_3:16329561-16329580 Msa0942080:three_prime_UTR 30.0%
AAGAAACGAGAATCAGAGAT+TGG - chr6_3:16316044-16316063 None:intergenic 35.0%
TATGACTTGAAACTGAAGTG+CGG + chr6_3:16316826-16316845 Msa0942080:intron 35.0%
CATATCAACATTGTCGTCAT+TGG + chr6_3:16316999-16317018 Msa0942080:CDS 35.0%
TCTGGAAAATCAACAACAAC+TGG + chr6_3:16317032-16317051 Msa0942080:CDS 35.0%
!!! TTTTGAAGCTGGTATCTCTA+AGG + chr6_3:16317346-16317365 Msa0942080:CDS 35.0%
GATGATCTGTTGTTGTAACA+AGG + chr6_3:16317421-16317440 Msa0942080:CDS 35.0%
AGTTTCATCCTACTTGAAGA+AGG + chr6_3:16317595-16317614 Msa0942080:CDS 35.0%
CAAGATGTTTACAAGATTGG+TGG + chr6_3:16317791-16317810 Msa0942080:CDS 35.0%
! GTTTACAAGATTGGTGGTAT+TGG + chr6_3:16317797-16317816 Msa0942080:CDS 35.0%
TGTTAAGAATGTTGCTGTGA+AGG + chr6_3:16317973-16317992 Msa0942080:CDS 35.0%
ATCTGGTAAGGAGATTGAAA+AGG + chr6_3:16318186-16318205 Msa0942080:CDS 35.0%
TCACCATTCTTCAAGAACTT+GGG - chr6_3:16318214-16318233 None:intergenic 35.0%
ATCACCATTCTTCAAGAACT+TGG - chr6_3:16318215-16318234 None:intergenic 35.0%
TGATGCTGGTATCATTAAGA+TGG + chr6_3:16318231-16318250 Msa0942080:CDS 35.0%
AACAACTTGTGAAGTAACCA+TGG - chr6_3:16318431-16318450 None:intergenic 35.0%
AGTTTCAAAAGGCAGCTAAA+AGG + chr6_3:16318590-16318609 Msa0942080:intron 35.0%
! ACATCTTAATTTTGCTGCTG+AGG + chr6_3:16318617-16318636 Msa0942080:intron 35.0%
ATCTTCCCAAGAAAAATTGC+AGG - chr6_3:16318770-16318789 None:intergenic 35.0%
GAGTATACTACATTTGCAGT+AGG + chr6_3:16318885-16318904 Msa0942080:intron 35.0%
!!! TGTCGACACTGTTTTGTTTT+AGG + chr6_3:16319114-16319133 Msa0942080:intron 35.0%
TGGTGGAAAGATGTTAACAA+TGG + chr6_3:16319388-16319407 Msa0942080:intron 35.0%
TTTAATCCCTTTCCACTTTC+CGG + chr6_3:16319571-16319590 Msa0942080:intron 35.0%
ATGTTGGATACAATAAGCTC+CGG - chr6_3:16319593-16319612 None:intergenic 35.0%
AAGTAAACATAATGCGGGTA+TGG + chr6_3:16319773-16319792 Msa0942080:intron 35.0%
! AGAACTCGTGTTTTCATTTC+AGG - chr6_3:16319904-16319923 None:intergenic 35.0%
AATCACTTGTTTGCTTCACA+TGG - chr6_3:16319967-16319986 None:intergenic 35.0%
GGAAAGAGGATAATGTTTGT+AGG - chr6_3:16320016-16320035 None:intergenic 35.0%
CAGAAAAAGTAAACTCACTG+TGG - chr6_3:16320037-16320056 None:intergenic 35.0%
!!! CACAGTGAGTTTACTTTTTC+TGG + chr6_3:16320035-16320054 Msa0942080:intron 35.0%
! TTTTGCTAACCACTTGCTTA+AGG - chr6_3:16320123-16320142 None:intergenic 35.0%
! TCACAAATCTAAGACCTCTA+AGG + chr6_3:16320467-16320486 Msa0942080:intron 35.0%
TATTGAACTTGAGACCTTAG+AGG - chr6_3:16320484-16320503 None:intergenic 35.0%
! TGAAGTATCAACCAACTTGT+CGG - chr6_3:16320571-16320590 None:intergenic 35.0%
! TGAAGCGTCATAGATTAGAT+AGG + chr6_3:16320784-16320803 Msa0942080:intron 35.0%
CTCTTTATGCACAACAAGTA+TGG - chr6_3:16320882-16320901 None:intergenic 35.0%
TGTGCATAAAGAGATGTACT+TGG + chr6_3:16320889-16320908 Msa0942080:intron 35.0%
TTGTGTCAAGAATTTCCCTA+TGG - chr6_3:16320956-16320975 None:intergenic 35.0%
GGGAAATTCTTGACACAATT+AGG + chr6_3:16320958-16320977 Msa0942080:intron 35.0%
AAGGATTGTGGAAGACAATT+TGG - chr6_3:16320996-16321015 None:intergenic 35.0%
GCATCCTTATCTAGAAATCA+AGG - chr6_3:16321015-16321034 None:intergenic 35.0%
ATGTGATGACATCGTAACAA+GGG - chr6_3:16321102-16321121 None:intergenic 35.0%
TATGTGATGACATCGTAACA+AGG - chr6_3:16321103-16321122 None:intergenic 35.0%
!! CATTACGATATCGATTCTGT+TGG - chr6_3:16321525-16321544 None:intergenic 35.0%
TTCGGAGAATTTATGCATGT+TGG + chr6_3:16321713-16321732 Msa0942080:intron 35.0%
TCGGAGAATTTATGCATGTT+GGG + chr6_3:16321714-16321733 Msa0942080:intron 35.0%
GACCAAAAATATATGCTTGC+TGG + chr6_3:16321739-16321758 Msa0942080:intron 35.0%
! TCCCAGCAAGCATATATTTT+TGG - chr6_3:16321744-16321763 None:intergenic 35.0%
! AAATATATGCTTGCTGGGAA+TGG + chr6_3:16321745-16321764 Msa0942080:intron 35.0%
! AATATATGCTTGCTGGGAAT+GGG + chr6_3:16321746-16321765 Msa0942080:intron 35.0%
TTAGATTTAATGGCAGGACA+TGG - chr6_3:16322056-16322075 None:intergenic 35.0%
GTATCTGAATTTGACTCAGT+TGG - chr6_3:16322174-16322193 None:intergenic 35.0%
AAATAGACACTTGGTTCCAT+CGG - chr6_3:16322208-16322227 None:intergenic 35.0%
TGTGGAAGAAGAAACTAAAC+CGG + chr6_3:16322446-16322465 Msa0942080:intron 35.0%
!!! ACTATCGGGATGTTTTTTGT+CGG + chr6_3:16322558-16322577 Msa0942080:intron 35.0%
TAATGTACATATACGCCAAG+AGG + chr6_3:16322846-16322865 Msa0942080:intron 35.0%
AATGTACATATACGCCAAGA+GGG + chr6_3:16322847-16322866 Msa0942080:intron 35.0%
!!! TTTTCGGGAGTGTCTTTTTA+CGG - chr6_3:16322873-16322892 None:intergenic 35.0%
!! TTTCTCCTTTGGTAGTTTTC+GGG - chr6_3:16322888-16322907 None:intergenic 35.0%
ATATCTAAATTCCCGCAAAG+TGG + chr6_3:16323553-16323572 Msa0942080:intron 35.0%
!!! TCAACGGTTTTAGTTTTCGA+CGG + chr6_3:16323647-16323666 Msa0942080:intron 35.0%
TGATATACTTGACCAGTTAG+TGG + chr6_3:16323700-16323719 Msa0942080:intron 35.0%
TATGCACGAAGTTGAAATGA+CGG - chr6_3:16323870-16323889 None:intergenic 35.0%
!! GCTAGAAAAAAGTGTTTAGG+TGG - chr6_3:16323947-16323966 None:intergenic 35.0%
!! GGAGCTAGAAAAAAGTGTTT+AGG - chr6_3:16323950-16323969 None:intergenic 35.0%
ACGTGAAAATTGATAAGGGT+GGG + chr6_3:16323986-16324005 Msa0942080:intron 35.0%
TGAATAAGATGATCTTCCAG+CGG - chr6_3:16324043-16324062 None:intergenic 35.0%
CAAAATTGATCATGAGAGAC+CGG - chr6_3:16324348-16324367 None:intergenic 35.0%
ACCGAAATGATTCAATCCAA+TGG - chr6_3:16324446-16324465 None:intergenic 35.0%
TTTCCCTCAACTATGTAGTA+TGG - chr6_3:16324603-16324622 None:intergenic 35.0%
! AGAACCGGTCTATTTTATTG+GGG - chr6_3:16324690-16324709 None:intergenic 35.0%
! ACACAAAATTTTGTGAGGTG+GGG - chr6_3:16325275-16325294 None:intergenic 35.0%
! CACACAAAATTTTGTGAGGT+GGG - chr6_3:16325276-16325295 None:intergenic 35.0%
ACACAAAATGTTGAGAGGTA+GGG - chr6_3:16325327-16325346 None:intergenic 35.0%
TACAGCTAAACTCTCTCATT+TGG + chr6_3:16325357-16325376 Msa0942080:intron 35.0%
TACTAATGACCTATACTCAC+GGG + chr6_3:16325405-16325424 Msa0942080:intron 35.0%
! ATTTTATCCGCGAATATCCA+CGG - chr6_3:16325458-16325477 None:intergenic 35.0%
TTATCCATGGGTATCCATTA+AGG - chr6_3:16325504-16325523 None:intergenic 35.0%
ATAGCAAGTATGGATATTCG+CGG - chr6_3:16325588-16325607 None:intergenic 35.0%
TGTTTGCTTAGGAAGTTGAA+AGG - chr6_3:16325644-16325663 None:intergenic 35.0%
! CCACTTTCACTTCCTTTTAA+AGG - chr6_3:16325725-16325744 None:intergenic 35.0%
! CCTTTAAAAGGAAGTGAAAG+TGG + chr6_3:16325722-16325741 Msa0942080:intron 35.0%
AATATTCGTGTTCGCTATGT+TGG - chr6_3:16326045-16326064 None:intergenic 35.0%
GTTCTCGTTAGAGATGTAAA+TGG - chr6_3:16326091-16326110 None:intergenic 35.0%
! TAAAATTGATGACATGGGTC+GGG - chr6_3:16326230-16326249 None:intergenic 35.0%
! GTAAAATTGATGACATGGGT+CGG - chr6_3:16326231-16326250 None:intergenic 35.0%
!! AGTGCCCTTGAATTTGTTTT+AGG - chr6_3:16326257-16326276 None:intergenic 35.0%
!! AACAAATTCAAGGGCACTTT+CGG + chr6_3:16326259-16326278 Msa0942080:intron 35.0%
GTATTGTTTAACCGTTGATG+TGG + chr6_3:16327021-16327040 Msa0942080:intron 35.0%
GATGTTGTTAACCACATCAA+CGG - chr6_3:16327035-16327054 None:intergenic 35.0%
! TGTGCTATTAACATGAGTTC+TGG + chr6_3:16327427-16327446 Msa0942080:intron 35.0%
CATATCAACATTGTCGTCAT+TGG + chr6_3:16316999-16317018 Msa0942080:CDS 35.0%
TCTGGAAAATCAACAACAAC+TGG + chr6_3:16317032-16317051 Msa0942080:CDS 35.0%
AATGACTGTACAGTAGTACT+TGG - chr6_3:16327819-16327838 None:intergenic 35.0%
!!! TTTTGAAGCTGGTATCTCTA+AGG + chr6_3:16317346-16317365 Msa0942080:CDS 35.0%
GATGATCTGTTGTTGTAACA+AGG + chr6_3:16317421-16317440 Msa0942080:CDS 35.0%
TGAGTTGTAGATTCTGACTT+TGG + chr6_3:16328254-16328273 Msa0942080:intron 35.0%
AGTTTCATCCTACTTGAAGA+AGG + chr6_3:16317595-16317614 Msa0942080:CDS 35.0%
CAAGATGTTTACAAGATTGG+TGG + chr6_3:16317791-16317810 Msa0942080:CDS 35.0%
! GTTTACAAGATTGGTGGTAT+TGG + chr6_3:16317797-16317816 Msa0942080:CDS 35.0%
TGTTAAGAATGTTGCTGTGA+AGG + chr6_3:16317973-16317992 Msa0942080:CDS 35.0%
!! AACTTGTTACCAAGATTGAC+AGG + chr6_3:16328918-16328937 Msa0942080:intron 35.0%
TCACCATTCTTCAAGAACTT+AGG - chr6_3:16318214-16318233 None:intergenic 35.0%
TGATGCTGGTATCATTAAGA+TGG + chr6_3:16318231-16318250 Msa0942080:CDS 35.0%
GTTGTGACATTACTTCTTCT+TGG - chr6_3:16329167-16329186 None:intergenic 35.0%
GAAGAAGTAATGTCACAACA+TGG + chr6_3:16329168-16329187 Msa0942080:intron 35.0%
AACTTGATAAGCCAAATTGC+AGG - chr6_3:16329587-16329606 None:intergenic 35.0%
! TGCAATTTGGCTTATCAAGT+TGG + chr6_3:16329586-16329605 Msa0942080:three_prime_UTR 35.0%
TATCTCTCATTCTCTCTCTG+CGG + chr6_3:16315975-16315994 Msa0942080:five_prime_UTR 40.0%
! CTGAATCGAAATCTAGGGTT+GGG - chr6_3:16316010-16316029 None:intergenic 40.0%
CTCAGCTGAATCGAAATCTA+GGG - chr6_3:16316015-16316034 None:intergenic 40.0%
TGGCTTGATTAGATCTTGTG+TGG + chr6_3:16316674-16316693 Msa0942080:intron 40.0%
TGTGATCGAGAGATTTGAGA+AGG + chr6_3:16317091-16317110 Msa0942080:CDS 40.0%
TTACCATCGATATTGCCTTG+TGG + chr6_3:16317192-16317211 Msa0942080:CDS 40.0%
TTTCCACAAGGCAATATCGA+TGG - chr6_3:16317198-16317217 None:intergenic 40.0%
AATGACTGTGCAGTAGTACT+TGG - chr6_3:16317231-16317250 None:intergenic 40.0%
TTGATGAAATCACGATGTCC+TGG - chr6_3:16317260-16317279 None:intergenic 40.0%
TCATCCTACTTGAAGAAGGT+TGG + chr6_3:16317599-16317618 Msa0942080:CDS 40.0%
GTAACCAACCTTCTTCAAGT+AGG - chr6_3:16317606-16317625 None:intergenic 40.0%
! GAACGAATGGGATTTTGTCT+GGG - chr6_3:16317631-16317650 None:intergenic 40.0%
CATGTTGTCACCTTCAAAAC+CGG - chr6_3:16317660-16317679 None:intergenic 40.0%
AAGGTGACAACATGATTGAG+AGG + chr6_3:16317666-16317685 Msa0942080:CDS 40.0%
TCCAAAAGTCACAACCATAC+CGG - chr6_3:16317864-16317883 None:intergenic 40.0%
ACTTCAGTTGTCAAACCAGT+GGG - chr6_3:16317887-16317906 None:intergenic 40.0%
AACTTCAGTTGTCAAACCAG+TGG - chr6_3:16317888-16317907 None:intergenic 40.0%
! GTGGTTCATGATGATGACTT+GGG - chr6_3:16318068-16318087 None:intergenic 40.0%
AAACTTCACAGCAATGTGAG+AGG - chr6_3:16318137-16318156 None:intergenic 40.0%
!! AACTTGTTACCAAGATCGAC+AGG + chr6_3:16318161-16318180 Msa0942080:CDS 40.0%
! TTCTTGAAGAATGGTGATGC+TGG + chr6_3:16318217-16318236 Msa0942080:CDS 40.0%
AAGTGGAGGATATTCAGCAA+AGG - chr6_3:16318284-16318303 None:intergenic 40.0%
TTTGCTGAATATCCTCCACT+TGG + chr6_3:16318283-16318302 Msa0942080:CDS 40.0%
ACTTGTGAAGTAACCATGGA+GGG - chr6_3:16318427-16318446 None:intergenic 40.0%
AACTTGTGAAGTAACCATGG+AGG - chr6_3:16318428-16318447 None:intergenic 40.0%
TACAGAACTGGGTTCTTGAT+CGG + chr6_3:16318528-16318547 Msa0942080:three_prime_UTR 40.0%
! ACTACCTTGTTTGCATTGCA+TGG + chr6_3:16318954-16318973 Msa0942080:intron 40.0%
TCTACAAACTCTACCTGCTT+TGG + chr6_3:16319213-16319232 Msa0942080:intron 40.0%
! TATCACTGATCGACTCATGT+TGG - chr6_3:16319532-16319551 None:intergenic 40.0%
AACATGAGTCGATCAGTGAT+AGG + chr6_3:16319531-16319550 Msa0942080:intron 40.0%
ATACAATAAGCTCCGGAAAG+TGG - chr6_3:16319586-16319605 None:intergenic 40.0%
!! TTGCCACTTGTTGTTGCTTA+TGG + chr6_3:16319985-16320004 Msa0942080:intron 40.0%
ACTCCATAAGCAACAACAAG+TGG - chr6_3:16319991-16320010 None:intergenic 40.0%
AGTAAACTCACTGTGGAAAG+AGG - chr6_3:16320030-16320049 None:intergenic 40.0%
GACTTAGATCCTTAAGCAAG+TGG + chr6_3:16320111-16320130 Msa0942080:intron 40.0%
TGTGTATGCTCTTAGTAGCT+TGG - chr6_3:16320223-16320242 None:intergenic 40.0%
ACCGTTGTAATGGTACACTA+TGG + chr6_3:16320430-16320449 Msa0942080:intron 40.0%
GCCATAGTGTACCATTACAA+CGG - chr6_3:16320434-16320453 None:intergenic 40.0%
AGAGTTAATCACCGACAAGT+TGG + chr6_3:16320557-16320576 Msa0942080:intron 40.0%
ACCTTGAGGTCATCTTTGTT+AGG + chr6_3:16320708-16320727 Msa0942080:intron 40.0%
TGTTAGGCTTACCATTTGTG+AGG + chr6_3:16320724-16320743 Msa0942080:intron 40.0%
GGATTTGATTGCCTCACAAA+TGG - chr6_3:16320738-16320757 None:intergenic 40.0%
TGAACATGTGAATGCAGAGT+TGG - chr6_3:16320832-16320851 None:intergenic 40.0%
TGGCATTCCATACTTCTAGT+TGG + chr6_3:16320909-16320928 Msa0942080:intron 40.0%
CTCCTGTCTGCATATTATAC+TGG + chr6_3:16321216-16321235 Msa0942080:intron 40.0%
AGCCAGTATAATATGCAGAC+AGG - chr6_3:16321221-16321240 None:intergenic 40.0%
TAGCGTTTGAACCCTACTTA+TGG + chr6_3:16321247-16321266 Msa0942080:intron 40.0%
CTAAACGGTGTCCATAAGTA+GGG - chr6_3:16321261-16321280 None:intergenic 40.0%
CTACTTATGGACACCGTTTA+GGG + chr6_3:16321260-16321279 Msa0942080:intron 40.0%
AAAAAAGAGGTCTCCTCCTA+TGG - chr6_3:16321310-16321329 None:intergenic 40.0%
AACACATGTTCCTTGCTACA+TGG + chr6_3:16321438-16321457 Msa0942080:intron 40.0%
AAACAGGATACCATGTAGCA+AGG - chr6_3:16321451-16321470 None:intergenic 40.0%
!! GGAGATCTGCACTTTTGATT+TGG - chr6_3:16321553-16321572 None:intergenic 40.0%
!! ATGGTGGTGGTAACATTGTA+GGG + chr6_3:16321800-16321819 Msa0942080:intron 40.0%
!!! AAAGGGTGTTTTTGTCGTGA+AGG - chr6_3:16321857-16321876 None:intergenic 40.0%
!!! TTTGTTTTTGTTCAGGCAGC+AGG - chr6_3:16322005-16322024 None:intergenic 40.0%
ATGGAGAAAAGTTGAGTGCA+TGG - chr6_3:16322037-16322056 None:intergenic 40.0%
ATCCACAGCCAAATCCTTTA+AGG - chr6_3:16322097-16322116 None:intergenic 40.0%
GATACATATAGTGCAACCGA+TGG + chr6_3:16322189-16322208 Msa0942080:intron 40.0%
GAACCAAGTGTCTATTTCGA+TGG + chr6_3:16322211-16322230 Msa0942080:intron 40.0%
!! TGTCTATTTCGATGGTGGAT+AGG + chr6_3:16322219-16322238 Msa0942080:intron 40.0%
CTGTGATAGAACTCACTCTA+CGG + chr6_3:16322244-16322263 Msa0942080:intron 40.0%
!! TGAGAGGTTTTGTGATGGAA+TGG + chr6_3:16322278-16322297 Msa0942080:intron 40.0%
AACTAAACCGGAGAGAGAAA+CGG + chr6_3:16322458-16322477 Msa0942080:intron 40.0%
!!! CTATCGGGATGTTTTTTGTC+GGG + chr6_3:16322559-16322578 Msa0942080:intron 40.0%
AAATTGTAGTCTCCTACGGT+AGG + chr6_3:16322709-16322728 Msa0942080:intron 40.0%
CTACAGTAGGCAACCTTAAT+GGG - chr6_3:16322738-16322757 None:intergenic 40.0%
!!! TTTTCTGTTTCTGAACAGGC+AGG - chr6_3:16323003-16323022 None:intergenic 40.0%
!!! CTGCTTTTCTGTTTCTGAAC+AGG - chr6_3:16323007-16323026 None:intergenic 40.0%
GTTCAGAAACAGAAAAGCAG+AGG + chr6_3:16323007-16323026 Msa0942080:intron 40.0%
TTCTTGCACTTATCACGAGT+GGG - chr6_3:16323150-16323169 None:intergenic 40.0%
TGATAAGTGCAAGAACTAGC+AGG + chr6_3:16323155-16323174 Msa0942080:intron 40.0%
GATAAGTGCAAGAACTAGCA+GGG + chr6_3:16323156-16323175 Msa0942080:intron 40.0%
TATACTTGACCAGTTAGTGG+AGG + chr6_3:16323703-16323722 Msa0942080:intron 40.0%
GTTTATAAGCCTCCACTAAC+TGG - chr6_3:16323715-16323734 None:intergenic 40.0%
TTTCACGTGATCATAATCGG+TGG - chr6_3:16323974-16323993 None:intergenic 40.0%
CACGTGAAAATTGATAAGGG+TGG + chr6_3:16323985-16324004 Msa0942080:intron 40.0%
TTCCCCCCAATAAAATAGAC+CGG + chr6_3:16324683-16324702 Msa0942080:intron 40.0%
! AACCGGTCTATTTTATTGGG+GGG - chr6_3:16324688-16324707 None:intergenic 40.0%
! GAACCGGTCTATTTTATTGG+GGG - chr6_3:16324689-16324708 None:intergenic 40.0%
TGCAACTAGGTAGTCAATAG+AGG - chr6_3:16324822-16324841 None:intergenic 40.0%
TGACTACCTAGTTGCAATTG+AGG + chr6_3:16324826-16324845 Msa0942080:intron 40.0%
ATTCAGCCTCAATTGCAACT+AGG - chr6_3:16324835-16324854 None:intergenic 40.0%
GTAAAAGATGGTTGCCCAAT+TGG + chr6_3:16325051-16325070 Msa0942080:intron 40.0%
! CGATCGATGTTTTGCCAATT+GGG - chr6_3:16325068-16325087 None:intergenic 40.0%
! TCGATCGATGTTTTGCCAAT+TGG - chr6_3:16325069-16325088 None:intergenic 40.0%
CCAAACATGTCAAACTAGGT+CGG - chr6_3:16325230-16325249 None:intergenic 40.0%
CGACCTAGTTTGACATGTTT+GGG + chr6_3:16325228-16325247 Msa0942080:intron 40.0%
GTACCCAAACATGTCAAACT+AGG - chr6_3:16325234-16325253 None:intergenic 40.0%
! GCACACAAAATTTTGTGAGG+TGG - chr6_3:16325277-16325296 None:intergenic 40.0%
! CTCGCACACAAAATTTTGTG+AGG - chr6_3:16325280-16325299 None:intergenic 40.0%
CACACAAAATGTTGAGAGGT+AGG - chr6_3:16325328-16325347 None:intergenic 40.0%
CGTACACACAAAATGTTGAG+AGG - chr6_3:16325332-16325351 None:intergenic 40.0%
! GAAACCTTAATGGATACCCA+TGG + chr6_3:16325497-16325516 Msa0942080:intron 40.0%
TAGCAAGTATGGATATTCGC+GGG - chr6_3:16325587-16325606 None:intergenic 40.0%
! AGTACTGAGGTTGTTTGCTT+AGG - chr6_3:16325655-16325674 None:intergenic 40.0%
AAAAGGAAGTGAAAGTGGTC+AGG + chr6_3:16325727-16325746 Msa0942080:intron 40.0%
! TCCGTGGATTACTCGTAAAA+CGG + chr6_3:16325977-16325996 Msa0942080:intron 40.0%
! TCCGTTTTACGAGTAATCCA+CGG - chr6_3:16325981-16326000 None:intergenic 40.0%
AGAGAGACACTGAGTGATAA+AGG - chr6_3:16326358-16326377 None:intergenic 40.0%
ATGGAAGGTTGTTACTCGTT+CGG - chr6_3:16326393-16326412 None:intergenic 40.0%
ATACCTCAGCTGAAACGAAA+TGG - chr6_3:16326412-16326431 None:intergenic 40.0%
!! AGATTGGTTTCATCGAGTTC+AGG + chr6_3:16327135-16327154 Msa0942080:intron 40.0%
CTTCTGAGCATGATGTTGTT+AGG + chr6_3:16327197-16327216 Msa0942080:intron 40.0%
! GTTCTGAGCTTGATGTTGTT+AGG + chr6_3:16327219-16327238 Msa0942080:intron 40.0%
GGTCACTTGATCTATAAGCT+AGG + chr6_3:16327641-16327660 Msa0942080:intron 40.0%
CACTTGATCTATAAGCTAGG+AGG + chr6_3:16327644-16327663 Msa0942080:intron 40.0%
ATGGGTTCTTGACAAGCTTA+AGG + chr6_3:16327739-16327758 Msa0942080:intron 40.0%
TTACCATCGATATTGCCTTG+TGG + chr6_3:16317192-16317211 Msa0942080:CDS 40.0%
TTTCCACAAGGCAATATCGA+TGG - chr6_3:16317198-16317217 None:intergenic 40.0%
TTGATGAAATCACGATGTCC+AGG - chr6_3:16317260-16317279 None:intergenic 40.0%
GCTCTTCTTGCATTTACTCT+TGG + chr6_3:16327977-16327996 Msa0942080:intron 40.0%
TCATCCTACTTGAAGAAGGT+TGG + chr6_3:16317599-16317618 Msa0942080:CDS 40.0%
GTAACCAACCTTCTTCAAGT+AGG - chr6_3:16317606-16317625 None:intergenic 40.0%
! GAACGAAGGGAATTTTGTCT+GGG - chr6_3:16328388-16328407 None:intergenic 40.0%
CATGTTGTCACCTTCAAATC+CGG - chr6_3:16328417-16328436 None:intergenic 40.0%
AAGGTGACAACATGATTGAG+AGG + chr6_3:16317666-16317685 Msa0942080:CDS 40.0%
TCCAAAAGTCACAACCATAC+CGG - chr6_3:16317864-16317883 None:intergenic 40.0%
ACTTCAGTTGTCAATCCAGT+GGG - chr6_3:16328644-16328663 None:intergenic 40.0%
AACTTCAGTTGTCAATCCAG+TGG - chr6_3:16328645-16328664 None:intergenic 40.0%
! GTGGTTCATGATGATGACTT+GGG - chr6_3:16318068-16318087 None:intergenic 40.0%
AAACTTCACAGCAATGTGAG+AGG - chr6_3:16318137-16318156 None:intergenic 40.0%
ATCTGGTAAGGAGATTGAGA+AGG + chr6_3:16328943-16328962 Msa0942080:intron 40.0%
GAGCCTAAGTTCTTGAAGAA+TGG + chr6_3:16328965-16328984 Msa0942080:intron 40.0%
! TTCTTGAAGAATGGTGATGC+TGG + chr6_3:16318217-16318236 Msa0942080:CDS 40.0%
AAGTGGAGGATATTCAGCAA+AGG - chr6_3:16318284-16318303 None:intergenic 40.0%
TTTGCTGAATATCCTCCACT+TGG + chr6_3:16318283-16318302 Msa0942080:CDS 40.0%
TGCAGCTAAACTTACAGAAC+TGG + chr6_3:16329284-16329303 Msa0942080:intron 40.0%
GCAGCTAAACTTACAGAACT+GGG + chr6_3:16329285-16329304 Msa0942080:intron 40.0%
TACAGAACTGGGTTCTTGAT+CGG + chr6_3:16318528-16318547 Msa0942080:three_prime_UTR 40.0%
! TAGCTTCATTTTGCTGCTGA+TGG + chr6_3:16329420-16329439 Msa0942080:three_prime_UTR 40.0%
! GCTGAATCGAAATCTAGGGT+TGG - chr6_3:16316011-16316030 None:intergenic 45.0%
CCTCAGCTGAATCGAAATCT+AGG - chr6_3:16316016-16316035 None:intergenic 45.0%
CCTAGATTTCGATTCAGCTG+AGG + chr6_3:16316013-16316032 Msa0942080:five_prime_UTR 45.0%
!! GTCATTGGACATGTCGATTC+TGG + chr6_3:16317014-16317033 Msa0942080:CDS 45.0%
GGTCACTTGATCTACAAGCT+AGG + chr6_3:16317053-16317072 Msa0942080:CDS 45.0%
CACTTGATCTACAAGCTAGG+AGG + chr6_3:16317056-16317075 Msa0942080:CDS 45.0%
AGCGTTCATTCAAGTACGCA+TGG + chr6_3:16317132-16317151 Msa0942080:CDS 45.0%
GCGTTCATTCAAGTACGCAT+GGG + chr6_3:16317133-16317152 Msa0942080:CDS 45.0%
CTTAAAGCTGAGCGTGAAAG+AGG + chr6_3:16317167-16317186 Msa0942080:CDS 45.0%
! CAGTGGTGGAGTCAATGATA+AGG - chr6_3:16317322-16317341 None:intergenic 45.0%
!! CTTATCATTGACTCCACCAC+TGG + chr6_3:16317320-16317339 Msa0942080:CDS 45.0%
! GAAGCTGGTATCTCTAAGGA+TGG + chr6_3:16317350-16317369 Msa0942080:CDS 45.0%
!! GCTCTTCTCGCTTTTACTCT+TGG + chr6_3:16317389-16317408 Msa0942080:CDS 45.0%
TACCACCCCTAAGTACTCAA+AGG + chr6_3:16317547-16317566 Msa0942080:CDS 45.0%
ACCGAGCCTTTGAGTACTTA+GGG - chr6_3:16317556-16317575 None:intergenic 45.0%
TACCGAGCCTTTGAGTACTT+AGG - chr6_3:16317557-16317576 None:intergenic 45.0%
TCGGTACGATGAAATCGTGA+AGG + chr6_3:16317571-16317590 Msa0942080:CDS 45.0%
! GGAACGAATGGGATTTTGTC+TGG - chr6_3:16317632-16317651 None:intergenic 45.0%
ATCCCATTCGTTCCAATCTC+CGG + chr6_3:16317638-16317657 Msa0942080:CDS 45.0%
AACCGGAGATTGGAACGAAT+GGG - chr6_3:16317643-16317662 None:intergenic 45.0%
AAACCGGAGATTGGAACGAA+TGG - chr6_3:16317644-16317663 None:intergenic 45.0%
!! GTTCCAATCTCCGGTTTTGA+AGG + chr6_3:16317647-16317666 Msa0942080:CDS 45.0%
TCACCTTCAAAACCGGAGAT+TGG - chr6_3:16317653-16317672 None:intergenic 45.0%
ACCAACCTTGACTGGTACAA+GGG + chr6_3:16317692-16317711 Msa0942080:CDS 45.0%
ATCTTGCAATGGAAGCCTGA+GGG - chr6_3:16317777-16317796 None:intergenic 45.0%
CCAAAAGTCACAACCATACC+GGG - chr6_3:16317863-16317882 None:intergenic 45.0%
TTGAATCCGACATTGTCTCC+TGG - chr6_3:16317953-16317972 None:intergenic 45.0%
TTTCGTTGCATCCAACTCCA+AGG + chr6_3:16318009-16318028 Msa0942080:CDS 45.0%
! GATGACTTGGGAAGTGAAGT+TGG - chr6_3:16318056-16318075 None:intergenic 45.0%
! GGTGGTTCATGATGATGACT+TGG - chr6_3:16318069-16318088 None:intergenic 45.0%
ATCCGTTTCCAATCTGACCA+GGG - chr6_3:16318090-16318109 None:intergenic 45.0%
TATCCGTTTCCAATCTGACC+AGG - chr6_3:16318091-16318110 None:intergenic 45.0%
GAGCCCAAGTTCTTGAAGAA+TGG + chr6_3:16318208-16318227 Msa0942080:CDS 45.0%
ATGCGTCAAACAGTTGCTGT+TGG + chr6_3:16318325-16318344 Msa0942080:CDS 45.0%
!! AGTTGCTGTTGGTGTCATCA+AGG + chr6_3:16318336-16318355 Msa0942080:CDS 45.0%
CTCAGCACCACAAACAATCA+AGG - chr6_3:16318730-16318749 None:intergenic 45.0%
CATGCCATGCAATGCAAACA+AGG - chr6_3:16318961-16318980 None:intergenic 45.0%
CTTGTTTGCATTGCATGGCA+TGG + chr6_3:16318959-16318978 Msa0942080:intron 45.0%
! ATGGATGCATGCATTAGCCT+TGG + chr6_3:16318978-16318997 Msa0942080:intron 45.0%
ATACACACTACTGCCAAAGC+AGG - chr6_3:16319229-16319248 None:intergenic 45.0%
GCTTTGGCAGTAGTGTGTAT+AGG + chr6_3:16319229-16319248 Msa0942080:intron 45.0%
TTGGCAGTAGTGTGTATAGG+TGG + chr6_3:16319232-16319251 Msa0942080:intron 45.0%
!! TTTTGAGAACCACGCTCGTA+TGG + chr6_3:16319368-16319387 Msa0942080:intron 45.0%
TAAGCTCCGGAAAGTGGAAA+GGG - chr6_3:16319580-16319599 None:intergenic 45.0%
ATAAGCTCCGGAAAGTGGAA+AGG - chr6_3:16319581-16319600 None:intergenic 45.0%
TGGTGGTTTCCCATTTGATG+AGG + chr6_3:16320646-16320665 Msa0942080:intron 45.0%
GCCTAACAAAGATGACCTCA+AGG - chr6_3:16320712-16320731 None:intergenic 45.0%
CCTAAACGGTGTCCATAAGT+AGG - chr6_3:16321262-16321281 None:intergenic 45.0%
CCTACTTATGGACACCGTTT+AGG + chr6_3:16321259-16321278 Msa0942080:intron 45.0%
! TTATGGACACCGTTTAGGGT+GGG + chr6_3:16321264-16321283 Msa0942080:intron 45.0%
CTATGGTAGGAGACCTAAGA+AGG - chr6_3:16321293-16321312 None:intergenic 45.0%
CTTCTTAGGTCTCCTACCAT+AGG + chr6_3:16321291-16321310 Msa0942080:intron 45.0%
!! GATGGTGGTGGTAACATTGT+AGG + chr6_3:16321799-16321818 Msa0942080:intron 45.0%
!! TGGTGGTGGTAACATTGTAG+GGG + chr6_3:16321801-16321820 Msa0942080:intron 45.0%
GTGGTAACATTGTAGGGGAA+GGG + chr6_3:16321806-16321825 Msa0942080:intron 45.0%
CACCTTAAAGGATTTGGCTG+TGG + chr6_3:16322092-16322111 Msa0942080:intron 45.0%
CCACCATCGAAATAGACACT+TGG - chr6_3:16322217-16322236 None:intergenic 45.0%
CCAAGTGTCTATTTCGATGG+TGG + chr6_3:16322214-16322233 Msa0942080:intron 45.0%
!! GATGGTGAGAGGTTTTGTGA+TGG + chr6_3:16322273-16322292 Msa0942080:intron 45.0%
!! GAGGTTTTGTGATGGAATGG+CGG + chr6_3:16322281-16322300 Msa0942080:intron 45.0%
TGAACAGCGAACAAGGACAA+AGG + chr6_3:16322307-16322326 Msa0942080:intron 45.0%
AGCGAACAAGGACAAAGGAA+CGG + chr6_3:16322312-16322331 Msa0942080:intron 45.0%
GAACGATGACAGCAAAGGAA+AGG + chr6_3:16322353-16322372 Msa0942080:intron 45.0%
GGCGACAATGTGATGATATG+TGG + chr6_3:16322374-16322393 Msa0942080:intron 45.0%
GGAAGAAGTGATAGACACCA+TGG + chr6_3:16322395-16322414 Msa0942080:intron 45.0%
TGATAGACACCATGGAACCA+GGG + chr6_3:16322403-16322422 Msa0942080:intron 45.0%
ACTAAACCGGAGAGAGAAAC+GGG + chr6_3:16322459-16322478 Msa0942080:intron 45.0%
CATTATCCCGTTTCTCTCTC+CGG - chr6_3:16322468-16322487 None:intergenic 45.0%
GCTACAGTAGGCAACCTTAA+TGG - chr6_3:16322739-16322758 None:intergenic 45.0%
CACACACATAAGTAGGGTGT+TGG - chr6_3:16322761-16322780 None:intergenic 45.0%
ACACTCCCGAAAACTACCAA+AGG + chr6_3:16322880-16322899 Msa0942080:intron 45.0%
!! TTCTCCTTTTGGTATTGGGG+TGG - chr6_3:16322922-16322941 None:intergenic 45.0%
!!! GTTTTGGTGGTGGTTTTCCT+CGG - chr6_3:16323094-16323113 None:intergenic 45.0%
GTTCTTGCACTTATCACGAG+TGG - chr6_3:16323151-16323170 None:intergenic 45.0%
CTCTAATGGCAATCTCTGTG+AGG - chr6_3:16323237-16323256 None:intergenic 45.0%
GACGAAATGATTGGACGTTC+CGG - chr6_3:16323274-16323293 None:intergenic 45.0%
TTCTCAAAAGTTTCCTCCGC+TGG + chr6_3:16324024-16324043 Msa0942080:intron 45.0%
ATAAGATGATCTTCCAGCGG+AGG - chr6_3:16324040-16324059 None:intergenic 45.0%
!! AGAGTTGTATCGCGTCGATT+TGG + chr6_3:16324076-16324095 Msa0942080:intron 45.0%
!! TTGTATCGCGTCGATTTGGT+TGG + chr6_3:16324080-16324099 Msa0942080:intron 45.0%
AACATGGTGTGTCTTGAGTG+TGG - chr6_3:16324740-16324759 None:intergenic 45.0%
TCAAACTAGGTCGGATCTAC+TGG - chr6_3:16325221-16325240 None:intergenic 45.0%
CCGACCTAGTTTGACATGTT+TGG + chr6_3:16325227-16325246 Msa0942080:intron 45.0%
ACCTATACTCACGGGAACTA+GGG + chr6_3:16325413-16325432 Msa0942080:intron 45.0%
GGCAAAAAAATTCGCATCCG+TGG + chr6_3:16325438-16325457 Msa0942080:intron 45.0%
TTCGCGGATAAAATCCGTCA+CGG + chr6_3:16325464-16325483 Msa0942080:intron 45.0%
GATAAAATCCGTCACGGACA+AGG + chr6_3:16325470-16325489 Msa0942080:intron 45.0%
ACAAGGAGCGGAAACCTTAA+TGG + chr6_3:16325487-16325506 Msa0942080:intron 45.0%
AGCAAACAACCTCAGTACTG+CGG + chr6_3:16325656-16325675 Msa0942080:intron 45.0%
TAATAACACCCGCAGTACTG+AGG - chr6_3:16325668-16325687 None:intergenic 45.0%
! CGAGTAATCCACGGATTTTG+AGG - chr6_3:16325972-16325991 None:intergenic 45.0%
TCGTAAAACGGATATCCGTG+AGG + chr6_3:16325989-16326008 Msa0942080:intron 45.0%
TATCACTCAGTGTCTCTCTG+CGG + chr6_3:16326359-16326378 Msa0942080:intron 45.0%
CTCAGCTGAAACGAAATGGA+AGG - chr6_3:16326408-16326427 None:intergenic 45.0%
CTTCCATTTCGTTTCAGCTG+AGG + chr6_3:16326406-16326425 Msa0942080:intron 45.0%
TGTGATCGAGAGATTCGAGA+AGG + chr6_3:16327679-16327698 Msa0942080:intron 45.0%
AGCGTTCATTCAAGTACGCA+TGG + chr6_3:16317132-16317151 Msa0942080:CDS 45.0%
GCGTTCATTCAAGTACGCAT+GGG + chr6_3:16317133-16317152 Msa0942080:CDS 45.0%
GGTGGTCTCAAATTTCCACA+AGG - chr6_3:16327798-16327817 None:intergenic 45.0%
GACTGTACAGTAGTACTTGG+TGG - chr6_3:16327816-16327835 None:intergenic 45.0%
TGTACAGTCATTGATGCTCC+TGG + chr6_3:16327827-16327846 Msa0942080:intron 45.0%
AAGAACAGCACAATCAGCCT+GGG - chr6_3:16327891-16327910 None:intergenic 45.0%
TAAGAACAGCACAATCAGCC+TGG - chr6_3:16327892-16327911 None:intergenic 45.0%
!! CTTATCATTGACTCCACCAC+TGG + chr6_3:16317320-16317339 Msa0942080:CDS 45.0%
! GAAGCTGGTATCTCTAAGGA+TGG + chr6_3:16317350-16317369 Msa0942080:CDS 45.0%
CTTCACGATTTCATCGTACC+TGG - chr6_3:16317573-16317592 None:intergenic 45.0%
CAGGTACGATGAAATCGTGA+AGG + chr6_3:16328328-16328347 Msa0942080:intron 45.0%
! GGAACGAAGGGAATTTTGTC+TGG - chr6_3:16328389-16328408 None:intergenic 45.0%
TCACCTTCAAATCCGGAGAT+GGG - chr6_3:16328410-16328429 None:intergenic 45.0%
ACCAACCTTGACTGGTACAA+GGG + chr6_3:16317692-16317711 Msa0942080:CDS 45.0%
TCAAGAGCCTCAAGAAGAGT+TGG - chr6_3:16328476-16328495 None:intergenic 45.0%
ATCTTGCAATGGAAGCCTGA+GGG - chr6_3:16317777-16317796 None:intergenic 45.0%
CCAAAAGTCACAACCATACC+GGG - chr6_3:16317863-16317882 None:intergenic 45.0%
TTGAATCCGACATTGTCTCC+TGG - chr6_3:16317953-16317972 None:intergenic 45.0%
TTTCGTTGCATCCAACTCCA+AGG + chr6_3:16318009-16318028 Msa0942080:CDS 45.0%
! GATGACTTGGGAAGTGAAGT+TGG - chr6_3:16318056-16318075 None:intergenic 45.0%
! GGTGGTTCATGATGATGACT+TGG - chr6_3:16318069-16318088 None:intergenic 45.0%
!! ACTTGGACGTTTTGCTGTCA+GGG + chr6_3:16318300-16318319 Msa0942080:CDS 45.0%
ATGCGTCAAACTGTTGCTGT+TGG + chr6_3:16329082-16329101 Msa0942080:intron 45.0%
!! TGTTGCTGTTGGTGTCATCA+AGG + chr6_3:16329093-16329112 Msa0942080:intron 45.0%
CTTGATAGAGGCCTGCAATT+TGG + chr6_3:16329573-16329592 Msa0942080:three_prime_UTR 45.0%
!! AAAAAAAAAAAAAAAAAAAG+AGG - chr6_3:16321323-16321342 None:intergenic 5.0%
GGTGGTCTCGAATTTCCACA+AGG - chr6_3:16317210-16317229 None:intergenic 50.0%
GACTGTGCAGTAGTACTTGG+TGG - chr6_3:16317228-16317247 None:intergenic 50.0%
TGCACAGTCATTGATGCTCC+AGG + chr6_3:16317239-16317258 Msa0942080:CDS 50.0%
CATGATTACTGGAACCTCCC+AGG + chr6_3:16317283-16317302 Msa0942080:CDS 50.0%
AAGGACTGCACAATCAGCCT+GGG - chr6_3:16317303-16317322 None:intergenic 50.0%
TAAGGACTGCACAATCAGCC+TGG - chr6_3:16317304-16317323 None:intergenic 50.0%
!! ATCATTGACTCCACCACTGG+TGG + chr6_3:16317323-16317342 Msa0942080:CDS 50.0%
AGCTTCAAAACCACCAGTGG+TGG - chr6_3:16317336-16317355 None:intergenic 50.0%
!!! ACCACTGGTGGTTTTGAAGC+TGG + chr6_3:16317335-16317354 Msa0942080:CDS 50.0%
ACCAGCTTCAAAACCACCAG+TGG - chr6_3:16317339-16317358 None:intergenic 50.0%
AGCCTTTGAGTACTTAGGGG+TGG - chr6_3:16317552-16317571 None:intergenic 50.0%
CCGAGCCTTTGAGTACTTAG+GGG - chr6_3:16317555-16317574 None:intergenic 50.0%
CCCCTAAGTACTCAAAGGCT+CGG + chr6_3:16317552-16317571 Msa0942080:CDS 50.0%
CTTGTACCAGTCAAGGTTGG+TGG - chr6_3:16317693-16317712 None:intergenic 50.0%
CACCAACCTTGACTGGTACA+AGG + chr6_3:16317691-16317710 Msa0942080:CDS 50.0%
TCCCTTGTACCAGTCAAGGT+TGG - chr6_3:16317696-16317715 None:intergenic 50.0%
TTGGTCCCTTGTACCAGTCA+AGG - chr6_3:16317700-16317719 None:intergenic 50.0%
TCAAGAGCCTCAAGGAGAGT+TGG - chr6_3:16317719-16317738 None:intergenic 50.0%
TGATCTGGTCAAGAGCCTCA+AGG - chr6_3:16317727-16317746 None:intergenic 50.0%
TCTTGCAATGGAAGCCTGAG+GGG - chr6_3:16317776-16317795 None:intergenic 50.0%
CATCTTGCAATGGAAGCCTG+AGG - chr6_3:16317778-16317797 None:intergenic 50.0%
! GGTATTGGAACTGTGCCAGT+TGG + chr6_3:16317812-16317831 Msa0942080:CDS 50.0%
CATACCGGGCTTCACAATAC+CGG - chr6_3:16317849-16317868 None:intergenic 50.0%
! CCCGGTATGGTTGTGACTTT+TGG + chr6_3:16317860-16317879 Msa0942080:CDS 50.0%
! GTTGTGACTTTTGGACCCAC+TGG + chr6_3:16317869-16317888 Msa0942080:CDS 50.0%
GCTCTTCCAGGAGACAATGT+CGG + chr6_3:16317944-16317963 Msa0942080:CDS 50.0%
AGTGAAGTTGGCAGCTTCCT+TGG - chr6_3:16318044-16318063 None:intergenic 50.0%
GTCATCATCATGAACCACCC+TGG + chr6_3:16318070-16318089 Msa0942080:CDS 50.0%
ATGAACCACCCTGGTCAGAT+TGG + chr6_3:16318079-16318098 Msa0942080:CDS 50.0%
CACCCTGGTCAGATTGGAAA+CGG + chr6_3:16318085-16318104 Msa0942080:CDS 50.0%
TCACAGCAATGTGAGAGGTG+TGG - chr6_3:16318132-16318151 None:intergenic 50.0%
GCAAAGGTCTCAACCACCAT+GGG - chr6_3:16318268-16318287 None:intergenic 50.0%
AGCAAAGGTCTCAACCACCA+TGG - chr6_3:16318269-16318288 None:intergenic 50.0%
ACAGCAAAACGTCCAAGTGG+AGG - chr6_3:16318298-16318317 None:intergenic 50.0%
CTGACAGCAAAACGTCCAAG+TGG - chr6_3:16318301-16318320 None:intergenic 50.0%
!! TGTTGGTGTCATCAAGGCTG+TGG + chr6_3:16318342-16318361 Msa0942080:CDS 50.0%
CATCAAGGCTGTGGAGAAGA+AGG + chr6_3:16318351-16318370 Msa0942080:CDS 50.0%
! TTGGTGACTTTGGCTCCAGT+GGG - chr6_3:16318379-16318398 None:intergenic 50.0%
! TTTGGTGACTTTGGCTCCAG+TGG - chr6_3:16318380-16318399 None:intergenic 50.0%
CTTCTTCTTGGCAGCAGCTT+TGG - chr6_3:16318398-16318417 None:intergenic 50.0%
GGAGGGAGATCACTTCTTCT+TGG - chr6_3:16318410-16318429 None:intergenic 50.0%
GAAGAAGTGATCTCCCTCCA+TGG + chr6_3:16318411-16318430 Msa0942080:exon 50.0%
! ATCGGCGATGGTACCGTTTT+TGG + chr6_3:16318546-16318565 Msa0942080:intron 50.0%
GATGCTTCTCACTGGAAGCA+TGG - chr6_3:16319085-16319104 None:intergenic 50.0%
TGATGCAGGATGCTTCTCAC+TGG - chr6_3:16319093-16319112 None:intergenic 50.0%
!! AACAGTGTCGACACTGATGC+AGG - chr6_3:16319107-16319126 None:intergenic 50.0%
ATCTTTCCACCATACGAGCG+TGG - chr6_3:16319380-16319399 None:intergenic 50.0%
CTTATGGACACCGTTTAGGG+TGG + chr6_3:16321263-16321282 Msa0942080:intron 50.0%
AGAAGGTCTCCCACCCTAAA+CGG - chr6_3:16321276-16321295 None:intergenic 50.0%
TTAGGGTGGGAGACCTTCTT+AGG + chr6_3:16321277-16321296 Msa0942080:intron 50.0%
CTTAGGTCTCCTACCATAGG+AGG + chr6_3:16321294-16321313 Msa0942080:intron 50.0%
AAGAGGTCTCCTCCTATGGT+AGG - chr6_3:16321306-16321325 None:intergenic 50.0%
TGGGAATGTATGCAGCTTGC+AGG + chr6_3:16321765-16321784 Msa0942080:intron 50.0%
GGGAATGTATGCAGCTTGCA+GGG + chr6_3:16321766-16321785 Msa0942080:intron 50.0%
GGTGGTAACATTGTAGGGGA+AGG + chr6_3:16321805-16321824 Msa0942080:intron 50.0%
CATTGTAGGGGAAGGGAACT+AGG + chr6_3:16321813-16321832 Msa0942080:intron 50.0%
CTCACTCTACGGCAAAGTGA+TGG + chr6_3:16322255-16322274 Msa0942080:intron 50.0%
! TACGGCAAAGTGATGGTGAG+AGG + chr6_3:16322262-16322281 Msa0942080:intron 50.0%
ACGACGAACGATGACAGCAA+AGG + chr6_3:16322348-16322367 Msa0942080:intron 50.0%
GTGATAGACACCATGGAACC+AGG + chr6_3:16322402-16322421 Msa0942080:intron 50.0%
GGTGAAGCAGTTGTGGTATG+TGG + chr6_3:16322428-16322447 Msa0942080:intron 50.0%
TGTTTGCAGCATGACCCACT+AGG - chr6_3:16322615-16322634 None:intergenic 50.0%
! CTTAATGGGTCTCCTACCGT+AGG - chr6_3:16322724-16322743 None:intergenic 50.0%
CTACGGTAGGAGACCCATTA+AGG + chr6_3:16322722-16322741 Msa0942080:intron 50.0%
!! AGTAGGGTGTTGGCTACAGT+AGG - chr6_3:16322751-16322770 None:intergenic 50.0%
! GTGTCTTTTTACGGCCCTCT+TGG - chr6_3:16322864-16322883 None:intergenic 50.0%
ACCAAAGGAGAAAACCCCCA+AGG + chr6_3:16322895-16322914 Msa0942080:intron 50.0%
! TCCTTGGGGGTTTTCTCCTT+TGG - chr6_3:16322899-16322918 None:intergenic 50.0%
! TTGGTATTGGGGTGGTCCTT+GGG - chr6_3:16322914-16322933 None:intergenic 50.0%
! TTTGGTATTGGGGTGGTCCT+TGG - chr6_3:16322915-16322934 None:intergenic 50.0%
AGGACCACCCCAATACCAAA+AGG + chr6_3:16322915-16322934 Msa0942080:intron 50.0%
! GCAGGTGTTTTGTCTAGTGG+TGG - chr6_3:16322985-16323004 None:intergenic 50.0%
! CAGGCAGGTGTTTTGTCTAG+TGG - chr6_3:16322988-16323007 None:intergenic 50.0%
AGAGGAACAACCCCAGAAGT+CGG + chr6_3:16323025-16323044 Msa0942080:intron 50.0%
AACCACCACCAAAACCCTAC+CGG + chr6_3:16323099-16323118 Msa0942080:intron 50.0%
CGTGGCTTGAAAGTGGTTCT+TGG - chr6_3:16323189-16323208 None:intergenic 50.0%
TGAAGCTCGTGGCTTGAAAG+TGG - chr6_3:16323196-16323215 None:intergenic 50.0%
GGTAGATAGAGTGAAGCTCG+TGG - chr6_3:16323207-16323226 None:intergenic 50.0%
CAATCTCTGTGAGGAGCTTG+TGG - chr6_3:16323228-16323247 None:intergenic 50.0%
GTGGAGCCTTTCATGCGTTA+GGG + chr6_3:16323435-16323454 Msa0942080:intron 50.0%
AGCCTTTCATGCGTTAGGGT+GGG + chr6_3:16323439-16323458 Msa0942080:intron 50.0%
ATTCCCGCAAAGTGGTGTAG+CGG + chr6_3:16323561-16323580 Msa0942080:intron 50.0%
CACGTGATCATAATCGGTGG+CGG - chr6_3:16323971-16323990 None:intergenic 50.0%
AAGGTGGTCTGTTCGCAACA+TGG - chr6_3:16324756-16324775 None:intergenic 50.0%
ACTAGGTCGGATCTACTGGT+TGG - chr6_3:16325217-16325236 None:intergenic 50.0%
GACCTATACTCACGGGAACT+AGG + chr6_3:16325412-16325431 Msa0942080:intron 50.0%
TCCCTAGTTCCCGTGAGTAT+AGG - chr6_3:16325417-16325436 None:intergenic 50.0%
ATACTCACGGGAACTAGGGA+TGG + chr6_3:16325417-16325436 Msa0942080:intron 50.0%
TTCGCATCCGTGGATATTCG+CGG + chr6_3:16325448-16325467 Msa0942080:intron 50.0%
AGTATGGATATTCGCGGGTG+CGG - chr6_3:16325582-16325601 None:intergenic 50.0%
GCAAACAACCTCAGTACTGC+GGG + chr6_3:16325657-16325676 Msa0942080:intron 50.0%
!! GTCATTGGACATGTCGACTC+TGG + chr6_3:16327602-16327621 Msa0942080:intron 50.0%
CTTAAGGCTGAGCGTGAAAG+AGG + chr6_3:16327755-16327774 Msa0942080:intron 50.0%
CATGATTACTGGAACCTCCC+AGG + chr6_3:16317283-16317302 Msa0942080:CDS 50.0%
!! ATCATTGACTCCACCACTGG+TGG + chr6_3:16317323-16317342 Msa0942080:CDS 50.0%
AGCTTCAAAACCACCAGTGG+TGG - chr6_3:16317336-16317355 None:intergenic 50.0%
!!! ACCACTGGTGGTTTTGAAGC+TGG + chr6_3:16317335-16317354 Msa0942080:CDS 50.0%
ACCAGCTTCAAAACCACCAG+TGG - chr6_3:16317339-16317358 None:intergenic 50.0%
! ATGCAAGAAGAGCGTGCTCA+CGG - chr6_3:16327970-16327989 None:intergenic 50.0%
TACCACCCCTAAGTACTCGA+AGG + chr6_3:16328304-16328323 Msa0942080:intron 50.0%
! ACCTGGCCTTCGAGTACTTA+GGG - chr6_3:16328313-16328332 None:intergenic 50.0%
! TACCTGGCCTTCGAGTACTT+AGG - chr6_3:16328314-16328333 None:intergenic 50.0%
ATTCCCTTCGTTCCCATCTC+CGG + chr6_3:16328395-16328414 Msa0942080:intron 50.0%
AATCCGGAGATGGGAACGAA+GGG - chr6_3:16328401-16328420 None:intergenic 50.0%
AAATCCGGAGATGGGAACGA+AGG - chr6_3:16328402-16328421 None:intergenic 50.0%
GTTCCCATCTCCGGATTTGA+AGG + chr6_3:16328404-16328423 Msa0942080:intron 50.0%
GTCACCTTCAAATCCGGAGA+TGG - chr6_3:16328411-16328430 None:intergenic 50.0%
CTTGTACCAGTCAAGGTTGG+TGG - chr6_3:16317693-16317712 None:intergenic 50.0%
CACCAACCTTGACTGGTACA+AGG + chr6_3:16317691-16317710 Msa0942080:CDS 50.0%
TCCCTTGTACCAGTCAAGGT+TGG - chr6_3:16317696-16317715 None:intergenic 50.0%
TTGGTCCCTTGTACCAGTCA+AGG - chr6_3:16317700-16317719 None:intergenic 50.0%
CAAGGGACCAACTCTTCTTG+AGG + chr6_3:16328466-16328485 Msa0942080:intron 50.0%
! GTCTCTTTGGCTCGTTGATC+TGG - chr6_3:16328499-16328518 None:intergenic 50.0%
TCTTGCAATGGAAGCCTGAG+GGG - chr6_3:16317776-16317795 None:intergenic 50.0%
CATCTTGCAATGGAAGCCTG+AGG - chr6_3:16317778-16317797 None:intergenic 50.0%
! GGTATTGGAACTGTGCCAGT+CGG + chr6_3:16317812-16317831 Msa0942080:CDS 50.0%
CATACCGGGCTTCACAATAC+CGG - chr6_3:16317849-16317868 None:intergenic 50.0%
! CCCGGTATGGTTGTGACTTT+TGG + chr6_3:16317860-16317879 Msa0942080:CDS 50.0%
! GTTGTGACTTTTGGACCCAC+TGG + chr6_3:16317869-16317888 Msa0942080:CDS 50.0%
GCTCTTCCAGGAGACAATGT+CGG + chr6_3:16317944-16317963 Msa0942080:CDS 50.0%
AGTGAAGTTGGCAGCTTCCT+TGG - chr6_3:16318044-16318063 None:intergenic 50.0%
GTCATCATCATGAACCACCC+TGG + chr6_3:16318070-16318089 Msa0942080:CDS 50.0%
ATGAACCACCCTGGACAGAT+CGG + chr6_3:16328836-16328855 Msa0942080:intron 50.0%
ATCCGTTTCCGATCTGTCCA+GGG - chr6_3:16328847-16328866 None:intergenic 50.0%
TATCCGTTTCCGATCTGTCC+AGG - chr6_3:16328848-16328867 None:intergenic 50.0%
TCACAGCAATGTGAGAGGTG+TGG - chr6_3:16318132-16318151 None:intergenic 50.0%
ACCAAGATTGACAGGCGATC+TGG + chr6_3:16328926-16328945 Msa0942080:intron 50.0%
ACCAGATCGCCTGTCAATCT+TGG - chr6_3:16328930-16328949 None:intergenic 50.0%
GATTGACAGGCGATCTGGTA+AGG + chr6_3:16328931-16328950 Msa0942080:intron 50.0%
GCAAAGGTCTCAACCACCAT+GGG - chr6_3:16318268-16318287 None:intergenic 50.0%
AGCAAAGGTCTCAACCACCA+TGG - chr6_3:16318269-16318288 None:intergenic 50.0%
ACAGCAAAACGTCCAAGTGG+AGG - chr6_3:16318298-16318317 None:intergenic 50.0%
CTGACAGCAAAACGTCCAAG+TGG - chr6_3:16318301-16318320 None:intergenic 50.0%
!! CACTTGGACGTTTTGCTGTC+AGG + chr6_3:16318299-16318318 Msa0942080:CDS 50.0%
!! TGTTGGTGTCATCAAGGCTG+TGG + chr6_3:16318342-16318361 Msa0942080:CDS 50.0%
CATCAAGGCTGTGGAGAAGA+AGG + chr6_3:16318351-16318370 Msa0942080:CDS 50.0%
GTGGAGAAGAAGGATCCTAC+CGG + chr6_3:16329118-16329137 Msa0942080:intron 50.0%
! AAGCGAGAAGAGCGTGCTCA+CGG - chr6_3:16317382-16317401 None:intergenic 55.0%
AGAGGTCCACCAACCTTGAC+TGG + chr6_3:16317684-16317703 Msa0942080:CDS 55.0%
CAAGGGACCAACTCTCCTTG+AGG + chr6_3:16317709-16317728 Msa0942080:CDS 55.0%
GTCTCTTGGGCTCGTTGATC+TGG - chr6_3:16317742-16317761 None:intergenic 55.0%
GGCTTGTCTGTGGGTCTCTT+GGG - chr6_3:16317755-16317774 None:intergenic 55.0%
CCAGTTGGACGTGTTGAGAC+CGG + chr6_3:16317827-16317846 Msa0942080:CDS 55.0%
GAGACCGGTATTGTGAAGCC+CGG + chr6_3:16317842-16317861 Msa0942080:CDS 55.0%
CGGTATTGTGAAGCCCGGTA+TGG + chr6_3:16317847-16317866 Msa0942080:CDS 55.0%
GTCTGTTGAGATGCACCACG+AGG + chr6_3:16317910-16317929 Msa0942080:CDS 55.0%
GCTCTCACTGAAGCTCTTCC+AGG + chr6_3:16317932-16317951 Msa0942080:CDS 55.0%
GCTGTGAAGGATCTCAAGCG+TGG + chr6_3:16317986-16318005 Msa0942080:CDS 55.0%
TTCCTTGGCAGGGTCATCCT+TGG - chr6_3:16318029-16318048 None:intergenic 55.0%
AGTTGGCAGCTTCCTTGGCA+GGG - chr6_3:16318039-16318058 None:intergenic 55.0%
AAGTTGGCAGCTTCCTTGGC+AGG - chr6_3:16318040-16318059 None:intergenic 55.0%
CGTTTCCAATCTGACCAGGG+TGG - chr6_3:16318087-16318106 None:intergenic 55.0%
ACCAAGATCGACAGGCGATC+TGG + chr6_3:16318169-16318188 Msa0942080:CDS 55.0%
ACCAGATCGCCTGTCGATCT+TGG - chr6_3:16318173-16318192 None:intergenic 55.0%
GATCGACAGGCGATCTGGTA+AGG + chr6_3:16318174-16318193 Msa0942080:CDS 55.0%
! TCAACCACCATGGGCTTGGT+GGG - chr6_3:16318259-16318278 None:intergenic 55.0%
GTGGAGAAGAAGGATCCCAC+TGG + chr6_3:16318361-16318380 Msa0942080:CDS 55.0%
! GGCAGCAGCTTTGGTGACTT+TGG - chr6_3:16318389-16318408 None:intergenic 55.0%
ACTGGGTTCTTGATCGGCGA+TGG + chr6_3:16318534-16318553 Msa0942080:three_prime_UTR 55.0%
TGAGAACCACGCTCGTATGG+TGG + chr6_3:16319371-16319390 Msa0942080:intron 55.0%
TTGCAGGGAACACACGAGGA+TGG + chr6_3:16321781-16321800 Msa0942080:intron 55.0%
GCGGTGATGAACAGCGAACA+AGG + chr6_3:16322300-16322319 Msa0942080:intron 55.0%
AGACACCATGGAACCAGGGA+AGG + chr6_3:16322407-16322426 Msa0942080:intron 55.0%
CTTCACCTTCCCTGGTTCCA+TGG - chr6_3:16322415-16322434 None:intergenic 55.0%
CACAACTGCTTCACCTTCCC+TGG - chr6_3:16322423-16322442 None:intergenic 55.0%
CAGGGAAGGTGAAGCAGTTG+TGG + chr6_3:16322421-16322440 Msa0942080:intron 55.0%
TGCAGCATGACCCACTAGGA+TGG - chr6_3:16322611-16322630 None:intergenic 55.0%
! TGGTATTGGGGTGGTCCTTG+GGG - chr6_3:16322913-16322932 None:intergenic 55.0%
AACCCCAGAAGTCGGTCAGA+AGG + chr6_3:16323033-16323052 Msa0942080:intron 55.0%
ACCCCAGAAGTCGGTCAGAA+GGG + chr6_3:16323034-16323053 Msa0942080:intron 55.0%
! TGGTGGTTTTCCTCGGTTCC+CGG - chr6_3:16323087-16323106 None:intergenic 55.0%
!!! TGTTGGCACCGGTAGGGTTT+TGG - chr6_3:16323110-16323129 None:intergenic 55.0%
AAGTGCAGCTCGTCCTGTGT+TGG - chr6_3:16323127-16323146 None:intergenic 55.0%
GGTGGAGCCTTTCATGCGTT+AGG + chr6_3:16323434-16323453 Msa0942080:intron 55.0%
GAGCCTTTCATGCGTTAGGG+TGG + chr6_3:16323438-16323457 Msa0942080:intron 55.0%
TGGACCGCTACACCACTTTG+CGG - chr6_3:16323568-16323587 None:intergenic 55.0%
GTCTTGAGTGTGGAGCAGGT+TGG - chr6_3:16324730-16324749 None:intergenic 55.0%
GTGTGTCTTGAGTGTGGAGC+AGG - chr6_3:16324734-16324753 None:intergenic 55.0%
GGCGTTATCACGTCGAAGCA+TGG - chr6_3:16324801-16324820 None:intergenic 55.0%
AATCCGTCACGGACAAGGAG+CGG + chr6_3:16325475-16325494 Msa0942080:intron 55.0%
TTTCCGCTCCTTGTCCGTGA+CGG - chr6_3:16325481-16325500 None:intergenic 55.0%
CGCGGATACCTCAAAATCCG+TGG + chr6_3:16325961-16325980 Msa0942080:intron 55.0%
! ACATGGGTCGGGCTTTAGTG+TGG - chr6_3:16326219-16326238 None:intergenic 55.0%
AACAGCACAATCAGCCTGGG+AGG - chr6_3:16327888-16327907 None:intergenic 55.0%
! TGCAAGAAGAGCGTGCTCAC+GGG - chr6_3:16327969-16327988 None:intergenic 55.0%
! CCTGGCCTTCGAGTACTTAG+GGG - chr6_3:16328312-16328331 None:intergenic 55.0%
AGAGGTCCACCAACCTTGAC+TGG + chr6_3:16317684-16317703 Msa0942080:CDS 55.0%
GGCTTGTCTGTGGGTCTCTT+TGG - chr6_3:16317755-16317774 None:intergenic 55.0%
GAGACCGGTATTGTGAAGCC+CGG + chr6_3:16317842-16317861 Msa0942080:CDS 55.0%
CGGTATTGTGAAGCCCGGTA+TGG + chr6_3:16317847-16317866 Msa0942080:CDS 55.0%
GTCTGTTGAGATGCACCACG+AGG + chr6_3:16317910-16317929 Msa0942080:CDS 55.0%
GCTCTCACTGAAGCTCTTCC+AGG + chr6_3:16317932-16317951 Msa0942080:CDS 55.0%
GCTGTGAAGGATCTCAAGCG+TGG + chr6_3:16317986-16318005 Msa0942080:CDS 55.0%
TTCCTTGGCAGGGTCATCCT+TGG - chr6_3:16318029-16318048 None:intergenic 55.0%
AGTTGGCAGCTTCCTTGGCA+GGG - chr6_3:16318039-16318058 None:intergenic 55.0%
AAGTTGGCAGCTTCCTTGGC+AGG - chr6_3:16318040-16318059 None:intergenic 55.0%
CACCCTGGACAGATCGGAAA+CGG + chr6_3:16328842-16328861 Msa0942080:intron 55.0%
GAGGTGTGGCAATCAAGCAC+TGG - chr6_3:16328875-16328894 None:intergenic 55.0%
! TCAACCACCATGGGCTTGGT+GGG - chr6_3:16318259-16318278 None:intergenic 55.0%
TTTGTGACCTTGGCTCCGGT+AGG - chr6_3:16329136-16329155 None:intergenic 55.0%
TACCGGAGCCAAGGTCACAA+AGG + chr6_3:16329135-16329154 Msa0942080:intron 55.0%
AGCCTTTGTGACCTTGGCTC+CGG - chr6_3:16329140-16329159 None:intergenic 55.0%
ACTGGGTTCTTGATCGGCGA+TGG + chr6_3:16318534-16318553 Msa0942080:three_prime_UTR 55.0%
GACTGCACAATCAGCCTGGG+AGG - chr6_3:16317300-16317319 None:intergenic 60.0%
! AGCGAGAAGAGCGTGCTCAC+GGG - chr6_3:16317381-16317400 None:intergenic 60.0%
GGGCTTGTCTGTGGGTCTCT+TGG - chr6_3:16317756-16317775 None:intergenic 60.0%
AGCCTGAGGGGCTTGTCTGT+GGG - chr6_3:16317764-16317783 None:intergenic 60.0%
AAGCCTGAGGGGCTTGTCTG+TGG - chr6_3:16317765-16317784 None:intergenic 60.0%
CCGGTCTCAACACGTCCAAC+TGG - chr6_3:16317830-16317849 None:intergenic 60.0%
GAGCTTCAGTGAGAGCCTCG+TGG - chr6_3:16317928-16317947 None:intergenic 60.0%
GGCAGGGTCATCCTTGGAGT+TGG - chr6_3:16318023-16318042 None:intergenic 60.0%
CTCCAAGGATGACCCTGCCA+AGG + chr6_3:16318024-16318043 Msa0942080:CDS 60.0%
GAGGTGTGGCAATCGAGCAC+TGG - chr6_3:16318118-16318137 None:intergenic 60.0%
GATGGTTCCCACCAAGCCCA+TGG + chr6_3:16318249-16318268 Msa0942080:CDS 60.0%
CTCAACCACCATGGGCTTGG+TGG - chr6_3:16318260-16318279 None:intergenic 60.0%
GGTCTCAACCACCATGGGCT+TGG - chr6_3:16318263-16318282 None:intergenic 60.0%
CAGCTTGCAGGGAACACACG+AGG + chr6_3:16321777-16321796 Msa0942080:intron 60.0%
CAGGGAACACACGAGGATGG+TGG + chr6_3:16321784-16321803 Msa0942080:intron 60.0%
! GGAACACACGAGGATGGTGG+TGG + chr6_3:16321787-16321806 Msa0942080:intron 60.0%
! GGTATTGGGGTGGTCCTTGG+GGG - chr6_3:16322912-16322931 None:intergenic 60.0%
! CCCCTTCTGACCGACTTCTG+GGG - chr6_3:16323038-16323057 None:intergenic 60.0%
CCCCAGAAGTCGGTCAGAAG+GGG + chr6_3:16323035-16323054 Msa0942080:intron 60.0%
! CCCCCTTCTGACCGACTTCT+GGG - chr6_3:16323039-16323058 None:intergenic 60.0%
CCCAGAAGTCGGTCAGAAGG+GGG + chr6_3:16323036-16323055 Msa0942080:intron 60.0%
CCAGAAGTCGGTCAGAAGGG+GGG + chr6_3:16323037-16323056 Msa0942080:intron 60.0%
! TGGTTTTCCTCGGTTCCCGG+GGG - chr6_3:16323084-16323103 None:intergenic 60.0%
! GTGGTTTTCCTCGGTTCCCG+GGG - chr6_3:16323085-16323104 None:intergenic 60.0%
! GGTGGTTTTCCTCGGTTCCC+GGG - chr6_3:16323086-16323105 None:intergenic 60.0%
!! CACCGGTAGGGTTTTGGTGG+TGG - chr6_3:16323104-16323123 None:intergenic 60.0%
!!! TGGCACCGGTAGGGTTTTGG+TGG - chr6_3:16323107-16323126 None:intergenic 60.0%
! AACCCTACCGGTGCCAACAC+AGG + chr6_3:16323111-16323130 Msa0942080:intron 60.0%
!! GTCCTGTGTTGGCACCGGTA+GGG - chr6_3:16323116-16323135 None:intergenic 60.0%
! AGCTCGTCCTGTGTTGGCAC+CGG - chr6_3:16323121-16323140 None:intergenic 60.0%
GGCCCACCCTAACGCATGAA+AGG - chr6_3:16323444-16323463 None:intergenic 60.0%
GGACCGCTACACCACTTTGC+GGG - chr6_3:16323567-16323586 None:intergenic 60.0%
GGTGGCTGTTAGCGACAAGG+TGG - chr6_3:16324772-16324791 None:intergenic 60.0%
CACGTCGAAGCATGGCAACG+CGG - chr6_3:16324793-16324812 None:intergenic 60.0%
TCAGTGTCTCTCTGCGGCTG+AGG + chr6_3:16326365-16326384 Msa0942080:intron 60.0%
GGCCTTCGAGTACTTAGGGG+TGG - chr6_3:16328309-16328328 None:intergenic 60.0%
CCCCTAAGTACTCGAAGGCC+AGG + chr6_3:16328309-16328328 Msa0942080:intron 60.0%
AGCCTGAGGGGCTTGTCTGT+GGG - chr6_3:16317764-16317783 None:intergenic 60.0%
AAGCCTGAGGGGCTTGTCTG+TGG - chr6_3:16317765-16317784 None:intergenic 60.0%
CCAGTCGGACGTGTTGAGAC+CGG + chr6_3:16328584-16328603 Msa0942080:intron 60.0%
GAGCTTCAGTGAGAGCCTCG+TGG - chr6_3:16317928-16317947 None:intergenic 60.0%
GGCAGGGTCATCCTTGGAGT+TGG - chr6_3:16318023-16318042 None:intergenic 60.0%
CTCCAAGGATGACCCTGCCA+AGG + chr6_3:16318024-16318043 Msa0942080:CDS 60.0%
CGTTTCCGATCTGTCCAGGG+TGG - chr6_3:16328844-16328863 None:intergenic 60.0%
GATGGTTCCCACCAAGCCCA+TGG + chr6_3:16318249-16318268 Msa0942080:CDS 60.0%
CTCAACCACCATGGGCTTGG+TGG - chr6_3:16318260-16318279 None:intergenic 60.0%
GGTCTCAACCACCATGGGCT+TGG - chr6_3:16318263-16318282 None:intergenic 60.0%
GAAGGATCCTACCGGAGCCA+AGG + chr6_3:16329126-16329145 Msa0942080:intron 60.0%
GGCAGCAGCCTTTGTGACCT+TGG - chr6_3:16329146-16329165 None:intergenic 60.0%
GACCCACAGACAAGCCCCTC+AGG + chr6_3:16317759-16317778 Msa0942080:CDS 65.0%
GGTTCCCACCAAGCCCATGG+TGG + chr6_3:16318252-16318271 Msa0942080:CDS 65.0%
! CCCCCCTTCTGACCGACTTC+TGG - chr6_3:16323040-16323059 None:intergenic 65.0%
GAAGTCGGTCAGAAGGGGGG+AGG + chr6_3:16323040-16323059 Msa0942080:intron 65.0%
! GGTTTTCCTCGGTTCCCGGG+GGG - chr6_3:16323083-16323102 None:intergenic 65.0%
!! CGTCCTGTGTTGGCACCGGT+AGG - chr6_3:16323117-16323136 None:intergenic 65.0%
CGCGGTGGCTGTTAGCGACA+AGG - chr6_3:16324775-16324794 None:intergenic 65.0%
GTCGAAGCATGGCAACGCGG+TGG - chr6_3:16324790-16324809 None:intergenic 65.0%
GACCCACAGACAAGCCCCTC+AGG + chr6_3:16317759-16317778 Msa0942080:CDS 65.0%
CCGGTCTCAACACGTCCGAC+TGG - chr6_3:16328587-16328606 None:intergenic 65.0%
GGTTCCCACCAAGCCCATGG+TGG + chr6_3:16318252-16318271 Msa0942080:CDS 65.0%
TCCTCGGTTCCCGGGGGGTT+GGG - chr6_3:16323078-16323097 None:intergenic 70.0%
TTCCTCGGTTCCCGGGGGGT+TGG - chr6_3:16323079-16323098 None:intergenic 70.0%
GAAGCCCCCACCCAACCCCC+CGG + chr6_3:16323065-16323084 Msa0942080:intron 75.0%
AAGCCCCCACCCAACCCCCC+GGG + chr6_3:16323066-16323085 Msa0942080:intron 75.0%
GTTCCCGGGGGGTTGGGTGG+GGG - chr6_3:16323072-16323091 None:intergenic 75.0%
GGTTCCCGGGGGGTTGGGTG+GGG - chr6_3:16323073-16323092 None:intergenic 75.0%
CGGTTCCCGGGGGGTTGGGT+GGG - chr6_3:16323074-16323093 None:intergenic 75.0%
TCGGTTCCCGGGGGGTTGGG+TGG - chr6_3:16323075-16323094 None:intergenic 75.0%
ACCCAACCCCCCGGGAACCG+AGG + chr6_3:16323074-16323093 Msa0942080:intron 75.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 16315947 16329657 16315947 ID=Msa0942080;Name=Msa0942080
chr6_3 mRNA 16315947 16329657 16315947 ID=Msa0942080-mRNA-1;Parent=Msa0942080;Name=Msa0942080-mRNA-1;_AED=0.27;_eAED=0.27;_QI=100|1|1|1|0.25|0|5|469|447
chr6_3 exon 16315947 16316034 16315947 ID=Msa0942080-mRNA-1:exon:5024;Parent=Msa0942080-mRNA-1
chr6_3 exon 16316969 16317442 16316969 ID=Msa0942080-mRNA-1:exon:5025;Parent=Msa0942080-mRNA-1
chr6_3 exon 16317539 16318555 16317539 ID=Msa0942080-mRNA-1:exon:5026;Parent=Msa0942080-mRNA-1
chr6_3 exon 16319461 16319490 16319461 ID=Msa0942080-mRNA-1:exon:5027;Parent=Msa0942080-mRNA-1
chr6_3 exon 16329354 16329657 16329354 ID=Msa0942080-mRNA-1:exon:5028;Parent=Msa0942080-mRNA-1
chr6_3 five_prime_UTR 16315947 16316034 16315947 ID=Msa0942080-mRNA-1:five_prime_utr;Parent=Msa0942080-mRNA-1
chr6_3 five_prime_UTR 16316969 16316980 16316969 ID=Msa0942080-mRNA-1:five_prime_utr;Parent=Msa0942080-mRNA-1
chr6_3 CDS 16316981 16317442 16316981 ID=Msa0942080-mRNA-1:cds;Parent=Msa0942080-mRNA-1
chr6_3 CDS 16317539 16318420 16317539 ID=Msa0942080-mRNA-1:cds;Parent=Msa0942080-mRNA-1
chr6_3 three_prime_UTR 16318421 16318555 16318421 ID=Msa0942080-mRNA-1:three_prime_utr;Parent=Msa0942080-mRNA-1
chr6_3 three_prime_UTR 16319461 16319490 16319461 ID=Msa0942080-mRNA-1:three_prime_utr;Parent=Msa0942080-mRNA-1
chr6_3 three_prime_UTR 16329354 16329657 16329354 ID=Msa0942080-mRNA-1:three_prime_utr;Parent=Msa0942080-mRNA-1
Gene Sequence

>Msa0942080

ATGGGAAAAGAAAAGATTCATATCAACATTGTCGTCATTGGACATGTCGATTCTGGAAAATCAACAACAACTGGTCACTTGATCTACAAGCTAGGAGGTATTGACAAGCGTGTGATCGAGAGATTTGAGAAGGAAGCTGCTGAAATGAACAAGCGTTCATTCAAGTACGCATGGGTTCTTGACAAACTTAAAGCTGAGCGTGAAAGAGGAATTACCATCGATATTGCCTTGTGGAAATTCGAGACCACCAAGTACTACTGCACAGTCATTGATGCTCCAGGACATCGTGATTTCATCAAGAACATGATTACTGGAACCTCCCAGGCTGATTGTGCAGTCCTTATCATTGACTCCACCACTGGTGGTTTTGAAGCTGGTATCTCTAAGGATGGACAGACCCGTGAGCACGCTCTTCTCGCTTTTACTCTTGGAGTGAAGCAGATGATCTGTTGTTGTAACAAGATGGATGCTACCACCCCTAAGTACTCAAAGGCTCGGTACGATGAAATCGTGAAGGAAGTTTCATCCTACTTGAAGAAGGTTGGTTACAACCCAGACAAAATCCCATTCGTTCCAATCTCCGGTTTTGAAGGTGACAACATGATTGAGAGGTCCACCAACCTTGACTGGTACAAGGGACCAACTCTCCTTGAGGCTCTTGACCAGATCAACGAGCCCAAGAGACCCACAGACAAGCCCCTCAGGCTTCCATTGCAAGATGTTTACAAGATTGGTGGTATTGGAACTGTGCCAGTTGGACGTGTTGAGACCGGTATTGTGAAGCCCGGTATGGTTGTGACTTTTGGACCCACTGGTTTGACAACTGAAGTTAAGTCTGTTGAGATGCACCACGAGGCTCTCACTGAAGCTCTTCCAGGAGACAATGTCGGATTCAATGTTAAGAATGTTGCTGTGAAGGATCTCAAGCGTGGTTTCGTTGCATCCAACTCCAAGGATGACCCTGCCAAGGAAGCTGCCAACTTCACTTCCCAAGTCATCATCATGAACCACCCTGGTCAGATTGGAAACGGATATGCACCAGTGCTCGATTGCCACACCTCTCACATTGCTGTGAAGTTTGCTGAACTTGTTACCAAGATCGACAGGCGATCTGGTAAGGAGATTGAAAAGGAGCCCAAGTTCTTGAAGAATGGTGATGCTGGTATCATTAAGATGGTTCCCACCAAGCCCATGGTGGTTGAGACCTTTGCTGAATATCCTCCACTTGGACGTTTTGCTGTCAGAGACATGCGTCAAACAGTTGCTGTTGGTGTCATCAAGGCTGTGGAGAAGAAGGATCCCACTGGAGCCAAAGTCACCAAAGCTGCTGCCAAGAAGAAGTGA
Protein sequence

>Msa0942080

MGKEKIHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGIVKPGMVVTFGPTGLTTEVKSVEMHHEALTEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKEIEKEPKFLKNGDAGIIKMVPTKPMVVETFAEYPPLGRFAVRDMRQTVAVGVIKAVEKKDPTGAKVTKAAAKKK*