AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1292510

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1292510 MtrunA17_Chr3g0093681 87.500 472 58 1 3 474 95 565 0.0 822
Msa1292510 MtrunA17_Chr1g0172501 87.288 472 59 1 3 474 95 565 0.0 821
Msa1292510 MtrunA17_Chr5g0405851 86.609 463 46 2 27 474 1 462 0.0 752
Msa1292510 MtrunA17_Chr4g0067151 28.289 304 193 7 178 462 25 322 4.00e-32 125
Msa1292510 MtrunA17_Chr4g0067151 30.502 259 163 7 217 461 22 277 1.04e-28 115
Msa1292510 MtrunA17_Chr4g0067151 27.650 217 147 2 255 462 18 233 1.91e-23 100
Msa1292510 MtrunA17_Chr1g0185501 32.941 255 153 7 217 461 22 268 5.07e-32 124
Msa1292510 MtrunA17_Chr1g0185501 25.773 291 200 6 181 461 28 312 6.87e-28 113
Msa1292510 MtrunA17_Chr1g0185501 28.019 207 144 3 258 462 21 224 1.69e-21 95.1
Msa1292510 MtrunA17_Chr3g0136971 31.441 229 139 3 187 398 426 653 3.25e-28 118
Msa1292510 MtrunA17_Chr3g0136971 26.953 256 181 4 213 464 410 663 1.44e-26 113
Msa1292510 MtrunA17_Chr2g0295791 30.769 221 150 3 206 425 155 373 6.16e-25 107
Msa1292510 MtrunA17_Chr2g0295791 22.909 275 201 7 195 461 185 456 2.21e-13 72.0
Msa1292510 MtrunA17_Chr1g0171711 27.181 298 200 11 172 461 497 785 1.12e-23 104
Msa1292510 MtrunA17_Chr1g0171711 26.154 195 132 7 272 462 517 703 3.83e-11 65.5
Msa1292510 MtrunA17_Chr5g0401661 25.159 314 201 8 178 462 333 641 2.05e-23 103
Msa1292510 MtrunA17_Chr5g0401661 25.000 208 144 3 188 385 445 650 1.91e-13 72.8
Msa1292510 MtrunA17_Chr5g0401661 26.437 174 116 4 215 378 513 684 3.03e-11 65.9
Msa1292510 MtrunA17_Chr1g0168391 28.000 225 153 5 195 413 239 460 2.56e-23 102
Msa1292510 MtrunA17_Chr5g0401671 24.919 309 206 6 178 462 245 551 1.42e-22 100
Msa1292510 MtrunA17_Chr5g0401671 24.537 216 151 3 188 393 355 568 3.72e-14 74.7
Msa1292510 MtrunA17_Chr6g0448921 26.609 233 169 2 214 445 8 239 2.35e-22 100
Msa1292510 MtrunA17_Chr6g0448921 28.902 173 121 2 195 366 74 245 6.40e-17 84.0
Msa1292510 MtrunA17_Chr6g0448921 28.467 137 96 2 325 461 36 170 9.51e-13 70.5
Msa1292510 MtrunA17_Chr4g0053651 25.806 310 202 8 178 462 228 534 3.83e-22 99.8
Msa1292510 MtrunA17_Chr4g0053651 29.197 137 88 1 258 385 407 543 3.03e-14 75.1
Msa1292510 MtrunA17_Chr8g0352821 24.857 350 247 12 124 462 121 465 6.15e-21 96.3
Msa1292510 MtrunA17_Chr1g0148791 27.517 298 198 11 174 461 612 901 6.40e-21 96.3
Msa1292510 MtrunA17_Chr7g0253861 27.413 259 171 9 215 461 48 301 1.06e-20 93.2
Msa1292510 MtrunA17_Chr7g0253861 24.554 224 159 4 188 402 106 328 2.28e-17 83.2
Msa1292510 MtrunA17_Chr4g0062881 28.125 288 186 11 182 461 182 456 2.44e-20 93.6
Msa1292510 MtrunA17_Chr3g0138311 25.786 318 214 11 151 461 594 896 3.92e-20 94.0
Msa1292510 MtrunA17_Chr4g0070791 28.870 239 154 4 238 461 33 270 7.24e-20 90.5
Msa1292510 MtrunA17_Chr4g0070791 24.653 288 194 7 195 461 33 318 2.12e-13 71.2
Msa1292510 MtrunA17_Chr2g0281451 28.372 215 150 4 214 426 7 219 7.90e-20 93.2
Msa1292510 MtrunA17_Chr2g0281451 28.272 191 131 3 192 377 24 213 3.34e-17 84.7
Msa1292510 MtrunA17_Chr2g0281451 26.316 209 149 3 162 369 43 247 1.08e-16 83.2
Msa1292510 MtrunA17_Chr7g0237241 23.630 292 212 8 173 461 491 774 1.49e-19 92.0
Msa1292510 MtrunA17_Chr7g0237271 22.772 303 220 9 165 461 489 783 2.35e-19 91.3
Msa1292510 MtrunA17_Chr1g0200901 26.087 276 195 6 188 460 131 400 9.22e-19 88.2
Msa1292510 MtrunA17_Chr1g0200901 23.826 298 169 9 215 463 73 361 8.83e-13 70.1
Msa1292510 MtrunA17_Chr3g0144511 26.667 300 187 13 193 464 78 372 1.02e-18 87.8
Msa1292510 MtrunA17_Chr1g0176241 25.773 291 167 11 216 462 113 398 1.11e-18 88.6
Msa1292510 MtrunA17_Chr1g0176241 24.916 297 176 8 167 420 191 483 1.82e-15 78.6
Msa1292510 MtrunA17_Chr2g0294611 30.594 219 118 6 257 443 237 453 2.38e-18 88.6
Msa1292510 MtrunA17_Chr4g0059031 30.539 167 112 3 211 375 489 653 5.05e-18 87.4
Msa1292510 MtrunA17_Chr4g0059031 24.912 285 198 7 191 461 371 653 1.87e-15 79.3
Msa1292510 MtrunA17_Chr4g0059031 25.523 239 146 6 255 463 51 287 9.30e-13 70.9
Msa1292510 MtrunA17_Chr7g0266251 27.113 284 170 11 212 460 6 287 1.05e-17 84.3
Msa1292510 MtrunA17_Chr7g0266251 25.108 231 147 8 257 463 9 237 3.64e-13 70.5
Msa1292510 MtrunA17_Chr7g0266251 25.362 276 163 11 181 418 70 340 1.95e-12 68.6
Msa1292510 MtrunA17_Chr1g0194721 29.148 223 122 4 257 443 235 457 1.48e-17 86.3
Msa1292510 MtrunA17_Chr2g0331981 28.218 202 138 5 245 442 82 280 1.75e-17 85.5
Msa1292510 MtrunA17_Chr2g0331981 25.000 256 185 7 222 472 15 268 1.13e-13 73.6
Msa1292510 MtrunA17_Chr2g0331981 25.568 176 125 4 205 375 82 256 3.41e-12 68.9
Msa1292510 MtrunA17_Chr4g0004241 27.404 208 145 5 257 460 92 297 1.87e-17 85.5
Msa1292510 MtrunA17_Chr4g0004241 25.391 256 184 7 222 472 15 268 3.12e-14 75.5
Msa1292510 MtrunA17_Chr4g0004241 25.000 176 126 4 205 375 82 256 6.52e-12 68.2
Msa1292510 MtrunA17_Chr2g0331961 27.273 231 151 8 223 439 52 279 4.06e-17 82.0
Msa1292510 MtrunA17_Chr2g0331961 24.138 232 170 6 246 472 40 270 5.87e-13 69.7
Msa1292510 MtrunA17_Chr2g0331961 25.571 219 146 7 205 408 84 300 6.38e-13 69.7
Msa1292510 MtrunA17_Chr4g0034491 27.237 257 167 12 220 468 16 260 2.14e-16 82.0
Msa1292510 MtrunA17_Chr2g0285951 24.887 221 144 4 263 461 29 249 2.56e-16 79.0
Msa1292510 MtrunA17_Chr2g0284241 25.524 286 146 10 238 463 23 301 4.20e-16 79.3
Msa1292510 MtrunA17_Chr2g0284241 31.250 144 87 4 191 323 188 330 7.30e-11 63.5
Msa1292510 MtrunA17_Chr8g0392701 30.986 213 135 6 259 461 10 220 3.88e-15 76.3
Msa1292510 MtrunA17_Chr8g0392701 27.184 206 141 7 218 418 59 260 4.35e-12 67.0
Msa1292510 MtrunA17_Chr7g0246741 28.780 205 138 4 187 386 376 577 6.20e-15 77.8
Msa1292510 MtrunA17_Chr2g0283891 25.556 270 186 9 163 418 41 309 7.86e-15 75.5
Msa1292510 MtrunA17_Chr8g0390861 25.514 243 169 7 203 440 892 1127 1.99e-14 76.3
Msa1292510 MtrunA17_Chr4g0058091 21.371 248 183 3 183 419 268 514 3.29e-14 74.7
Msa1292510 MtrunA17_Chr1g0197551 25.568 176 127 2 256 431 1 172 3.65e-14 75.5
Msa1292510 MtrunA17_Chr1g0197551 22.222 279 184 7 215 463 2 277 2.29e-12 69.7
Msa1292510 MtrunA17_Chr4g0035611 25.568 176 127 2 256 431 1 172 4.13e-14 75.1
Msa1292510 MtrunA17_Chr4g0047091 25.194 258 156 9 172 411 80 318 6.17e-14 73.2
Msa1292510 MtrunA17_Chr2g0282401 27.692 195 132 7 272 464 520 707 7.83e-14 73.9
Msa1292510 MtrunA17_Chr2g0282401 24.272 309 212 12 163 461 491 787 1.45e-12 70.1
Msa1292510 MtrunA17_Chr2g0307941 26.667 210 144 4 183 383 65 273 2.36e-13 72.8
Msa1292510 MtrunA17_Chr2g0307941 26.442 208 140 6 221 418 61 265 6.38e-11 65.1
Msa1292510 MtrunA17_Chr3g0099061 24.333 300 174 8 188 473 222 482 3.01e-13 71.6
Msa1292510 MtrunA17_Chr1g0183051 21.739 414 298 11 21 418 100 503 4.75e-13 71.2
Msa1292510 MtrunA17_Chr8g0383711 21.583 278 165 7 188 418 26 297 1.11e-12 68.6
Msa1292510 MtrunA17_Chr7g0234591 25.688 218 137 7 237 441 132 337 4.02e-12 68.2
Msa1292510 MtrunA17_Chr2g0292301 29.474 190 108 6 292 461 137 320 2.14e-11 65.9
Msa1292510 MtrunA17_Chr4g0047051 23.592 284 166 11 180 418 30 307 2.36e-11 64.7
Msa1292510 MtrunA17_Chr3g0095501 28.402 169 112 6 299 462 263 427 3.36e-11 65.5
Msa1292510 MtrunA17_Chr3g0095501 27.344 128 90 1 257 381 263 390 4.37e-11 65.1
Msa1292510 MtrunA17_Chr5g0395821 27.374 179 118 5 251 419 166 342 3.62e-11 65.1
Msa1292510 MtrunA17_Chr8g0361561 25.328 229 141 8 202 410 100 318 3.98e-11 64.7
Msa1292510 MtrunA17_Chr4g0057141 24.464 233 153 7 215 432 347 571 4.89e-11 65.1
Msa1292510 MtrunA17_Chr1g0185891 24.464 233 153 7 215 432 286 510 5.28e-11 65.1
Msa1292510 MtrunA17_Chr4g0069701 26.842 190 129 5 237 419 32 218 7.31e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1292510 AT2G41500.1 62.845 471 162 7 11 474 89 553 0.0 600
Msa1292510 AT2G41500.2 62.845 471 162 7 11 474 89 553 0.0 600
Msa1292510 AT2G05720.1 36.970 330 141 5 119 444 2 268 2.53e-57 191
Msa1292510 AT2G05720.1 25.616 203 129 6 262 462 61 243 9.80e-12 65.9
Msa1292510 AT3G49660.1 29.897 291 193 6 181 462 25 313 1.08e-32 127
Msa1292510 AT3G49660.1 29.412 255 167 7 217 461 19 270 3.51e-27 111
Msa1292510 AT3G49660.1 29.048 210 143 3 258 462 18 226 2.50e-23 100
Msa1292510 AT3G49660.1 21.633 245 144 5 183 380 74 317 6.04e-13 70.1
Msa1292510 AT5G25150.1 31.799 239 145 3 177 398 415 652 5.08e-29 121
Msa1292510 AT5G25150.1 25.000 280 188 5 183 461 355 613 3.39e-23 103
Msa1292510 AT5G25150.2 34.135 208 135 2 177 383 415 621 5.56e-29 120
Msa1292510 AT5G25150.2 25.000 280 188 5 183 461 355 613 3.83e-23 103
Msa1292510 AT4G02730.1 29.921 254 171 6 213 461 34 285 6.90e-29 116
Msa1292510 AT4G02730.1 26.102 295 201 6 178 461 41 329 4.23e-27 111
Msa1292510 AT4G15900.1 31.128 257 169 7 207 461 162 412 2.95e-26 111
Msa1292510 AT4G15900.1 22.867 293 212 7 177 461 176 462 1.87e-14 75.9
Msa1292510 AT2G33340.2 28.231 294 185 11 195 474 237 518 5.13e-26 111
Msa1292510 AT2G33340.1 28.231 294 185 11 195 474 237 518 5.13e-26 111
Msa1292510 AT2G33340.3 30.973 226 138 7 195 410 237 454 9.57e-26 110
Msa1292510 AT3G16650.1 30.833 240 161 5 207 445 156 391 1.16e-24 107
Msa1292510 AT5G67320.1 23.948 309 209 4 178 462 263 569 6.23e-24 105
Msa1292510 AT5G67320.1 21.212 264 155 5 181 393 325 586 7.23e-14 74.3
Msa1292510 AT5G67320.1 27.638 199 132 4 190 378 416 612 3.26e-13 72.4
Msa1292510 AT5G67320.1 23.767 223 149 4 257 462 258 476 7.86e-11 64.7
Msa1292510 AT4G32551.2 27.987 318 211 11 154 461 659 968 1.81e-23 104
Msa1292510 AT4G32551.1 28.523 298 195 11 174 461 641 930 2.10e-23 104
Msa1292510 AT1G61210.3 28.169 213 149 1 192 400 24 236 4.07e-23 103
Msa1292510 AT1G61210.3 26.000 250 181 3 214 462 7 253 2.49e-20 95.1
Msa1292510 AT1G61210.3 27.103 214 143 5 162 370 43 248 9.06e-16 80.9
Msa1292510 AT1G11160.4 28.638 213 148 1 192 400 24 236 7.19e-23 102
Msa1292510 AT1G11160.4 28.037 214 152 2 214 426 7 219 2.02e-21 98.6
Msa1292510 AT1G11160.4 29.016 193 123 3 275 461 27 211 4.04e-19 91.3
Msa1292510 AT1G11160.4 26.761 213 143 5 162 369 43 247 1.09e-16 83.6
Msa1292510 AT1G61210.1 28.169 213 149 1 192 400 24 236 7.55e-23 102
Msa1292510 AT1G61210.1 26.000 250 181 3 214 462 7 253 4.54e-20 94.4
Msa1292510 AT1G61210.1 27.103 214 143 5 162 370 43 248 1.49e-15 80.1
Msa1292510 AT1G61210.2 28.169 213 149 1 192 400 24 236 7.61e-23 102
Msa1292510 AT1G61210.2 26.000 250 181 3 214 462 7 253 4.34e-20 94.4
Msa1292510 AT1G61210.2 27.103 214 143 5 162 370 43 248 1.41e-15 80.1
Msa1292510 AT1G11160.1 28.638 213 148 1 192 400 24 236 9.18e-23 102
Msa1292510 AT1G11160.1 28.037 214 152 2 214 426 7 219 2.53e-21 98.2
Msa1292510 AT1G11160.1 29.016 193 123 3 275 461 27 211 5.42e-19 90.9
Msa1292510 AT1G11160.1 26.761 213 143 5 162 369 43 247 1.55e-16 83.2
Msa1292510 AT1G11160.2 28.638 213 148 1 192 400 24 236 9.25e-23 102
Msa1292510 AT1G11160.2 28.037 214 152 2 214 426 7 219 2.46e-21 98.2
Msa1292510 AT1G11160.2 29.016 193 123 3 275 461 27 211 5.36e-19 90.9
Msa1292510 AT1G11160.2 26.761 213 143 5 162 369 43 247 1.56e-16 83.2
Msa1292510 AT5G08390.1 26.636 214 155 2 214 426 8 220 2.31e-22 101
Msa1292510 AT5G08390.1 28.324 173 122 2 206 377 43 214 7.90e-19 90.1
Msa1292510 AT5G08390.1 27.807 187 133 2 275 461 28 212 8.87e-18 87.0
Msa1292510 AT5G08390.1 26.012 173 126 2 195 366 74 245 2.99e-14 75.9
Msa1292510 AT5G13480.2 26.510 298 204 9 186 473 135 427 2.50e-22 100
Msa1292510 AT5G13480.2 22.613 199 152 2 263 461 133 329 2.41e-11 66.6
Msa1292510 AT4G29830.1 30.544 239 150 5 238 461 33 270 2.53e-22 97.8
Msa1292510 AT4G29830.1 30.370 135 93 1 270 403 164 298 6.92e-12 67.0
Msa1292510 AT5G13480.4 26.510 298 204 9 186 473 112 404 2.77e-22 100
Msa1292510 AT2G32700.7 26.299 308 208 13 163 461 508 805 3.13e-22 100
Msa1292510 AT5G13480.1 26.510 298 204 9 186 473 124 416 3.19e-22 100
Msa1292510 AT2G32700.6 26.299 308 208 13 163 461 487 784 3.21e-22 100
Msa1292510 AT5G13480.3 26.510 298 204 9 186 473 112 404 3.47e-22 100
Msa1292510 AT2G32700.2 26.299 308 208 13 163 461 489 786 3.52e-22 100
Msa1292510 AT2G32700.5 26.299 308 208 13 163 461 489 786 3.52e-22 100
Msa1292510 AT2G32700.1 26.299 308 208 13 163 461 489 786 3.52e-22 100
Msa1292510 AT2G32700.4 26.299 308 208 13 163 461 489 786 3.52e-22 100
Msa1292510 AT2G32700.3 26.299 308 208 13 163 461 489 786 3.52e-22 100
Msa1292510 AT1G48630.1 33.962 212 125 6 181 380 57 265 9.99e-22 96.3
Msa1292510 AT1G48630.1 31.053 190 120 5 281 461 33 220 6.87e-15 76.3
Msa1292510 AT1G48630.1 24.554 224 153 7 217 429 10 228 5.18e-12 67.4
Msa1292510 AT1G48630.1 27.879 165 112 5 258 418 99 260 1.19e-11 66.2
Msa1292510 AT1G48630.1 25.000 224 143 6 177 377 102 323 1.36e-11 66.2
Msa1292510 AT1G04510.1 29.075 227 147 7 195 413 237 457 1.05e-21 98.6
Msa1292510 AT1G04510.2 29.075 227 147 7 195 413 237 457 1.05e-21 98.6
Msa1292510 AT3G18130.1 34.434 212 124 6 181 380 57 265 1.08e-21 96.3
Msa1292510 AT3G18130.1 31.053 190 120 5 281 461 33 220 2.43e-14 74.3
Msa1292510 AT3G18130.1 27.879 165 112 5 258 418 99 260 1.53e-11 65.9
Msa1292510 AT3G18130.1 24.664 223 152 8 218 429 11 228 2.12e-11 65.5
Msa1292510 AT3G18130.1 25.000 224 143 7 177 377 102 323 4.81e-11 64.3
Msa1292510 AT5G23430.1 26.636 214 155 2 214 426 8 220 1.51e-21 98.6
Msa1292510 AT5G23430.1 28.342 187 132 2 275 461 28 212 1.97e-17 85.9
Msa1292510 AT5G23430.1 26.590 173 125 2 195 366 74 245 2.94e-14 75.9
Msa1292510 AT5G23430.3 26.636 214 155 2 214 426 8 220 1.60e-21 98.6
Msa1292510 AT5G23430.3 28.342 187 132 2 275 461 28 212 2.13e-17 85.9
Msa1292510 AT5G23430.3 26.590 173 125 2 195 366 74 245 3.18e-14 75.9
Msa1292510 AT5G23430.2 26.636 214 155 2 214 426 8 220 1.60e-21 98.6
Msa1292510 AT5G23430.2 28.342 187 132 2 275 461 28 212 2.13e-17 85.9
Msa1292510 AT5G23430.2 26.590 173 125 2 195 366 74 245 3.18e-14 75.9
Msa1292510 AT1G71840.1 27.368 285 194 8 187 463 120 399 8.40e-21 94.7
Msa1292510 AT1G71840.1 28.249 177 125 2 257 432 63 238 1.98e-15 78.6
Msa1292510 AT1G71840.1 22.556 266 193 7 206 463 97 357 1.96e-13 72.4
Msa1292510 AT1G18080.1 32.864 213 127 6 181 380 57 266 1.02e-20 93.2
Msa1292510 AT1G18080.1 30.303 198 126 5 259 445 10 206 1.39e-13 72.0
Msa1292510 AT1G18080.1 25.904 166 115 3 258 418 99 261 1.36e-11 66.2
Msa1292510 AT1G11160.3 29.282 181 128 0 220 400 14 194 1.76e-20 95.5
Msa1292510 AT1G11160.3 30.769 169 116 1 258 426 10 177 3.20e-20 94.7
Msa1292510 AT1G11160.3 30.488 164 100 3 304 461 14 169 3.32e-17 85.1
Msa1292510 AT1G11160.3 29.885 174 112 4 201 369 37 205 1.72e-16 83.2
Msa1292510 AT1G11160.3 30.864 162 102 5 180 333 51 210 2.25e-11 67.0
Msa1292510 AT2G43770.1 25.000 232 164 4 188 410 104 334 1.40e-19 90.1
Msa1292510 AT2G43770.1 25.490 204 147 5 260 461 49 249 1.13e-16 81.6
Msa1292510 AT2G43770.1 23.810 273 152 8 218 437 49 318 1.20e-13 72.4
Msa1292510 AT2G22040.1 29.302 215 140 5 257 462 77 288 2.71e-19 89.0
Msa1292510 AT2G47410.4 30.516 213 122 5 257 443 47 259 7.69e-19 90.5
Msa1292510 AT2G47410.2 30.516 213 122 5 257 443 228 440 1.09e-18 90.1
Msa1292510 AT2G47410.1 30.516 213 122 5 257 443 229 441 1.14e-18 90.1
Msa1292510 AT1G79990.1 27.165 254 158 9 201 439 36 277 3.08e-18 88.6
Msa1292510 AT1G79990.1 24.615 260 189 7 218 472 11 268 9.94e-14 74.3
Msa1292510 AT1G79990.2 27.165 254 158 9 201 439 36 277 3.35e-18 88.2
Msa1292510 AT1G79990.2 24.615 260 189 7 218 472 11 268 9.64e-14 74.3
Msa1292510 AT5G52820.1 26.910 301 196 11 178 468 107 393 3.86e-18 87.4
Msa1292510 AT5G52820.1 31.383 188 121 4 258 439 103 288 1.65e-17 85.5
Msa1292510 AT5G52820.1 25.965 285 166 7 178 420 192 473 7.24e-17 83.2
Msa1292510 AT5G52820.1 25.723 346 201 13 162 461 136 471 1.71e-14 75.9
Msa1292510 AT2G26060.1 26.715 277 158 11 214 447 12 286 4.59e-18 85.9
Msa1292510 AT2G26060.1 29.187 209 126 7 195 382 42 249 3.19e-14 74.3
Msa1292510 AT2G26060.1 25.547 274 166 12 181 418 75 346 2.97e-13 71.2
Msa1292510 AT5G16750.1 29.858 211 139 6 189 392 28 236 4.59e-18 87.8
Msa1292510 AT5G16750.1 28.571 182 118 3 205 375 472 652 3.19e-16 82.0
Msa1292510 AT5G16750.1 26.341 205 144 3 235 433 31 234 1.35e-14 77.0
Msa1292510 AT5G16750.1 23.567 314 217 9 166 457 344 656 7.28e-14 74.7
Msa1292510 AT5G16750.1 28.049 164 112 3 303 461 57 219 2.39e-12 70.1
Msa1292510 AT5G16750.1 27.692 195 132 5 178 365 58 250 4.15e-12 69.3
Msa1292510 AT2G26060.2 26.715 277 158 11 214 447 12 286 5.12e-18 85.5
Msa1292510 AT2G26060.2 29.187 209 126 7 195 382 42 249 3.34e-14 73.9
Msa1292510 AT4G34460.1 24.497 298 195 10 193 464 78 371 9.39e-18 85.1
Msa1292510 AT4G34460.4 24.497 298 195 10 193 464 73 366 9.41e-18 85.1
Msa1292510 AT4G34460.2 24.497 298 195 10 193 464 16 309 1.15e-17 84.3
Msa1292510 AT3G15980.7 28.230 209 136 6 245 449 82 280 1.18e-17 86.7
Msa1292510 AT3G15980.7 25.385 260 187 7 218 472 11 268 1.85e-15 79.7
Msa1292510 AT3G15980.7 24.432 176 127 4 205 375 82 256 2.41e-11 66.6
Msa1292510 AT3G15980.7 25.862 174 125 3 205 374 124 297 5.10e-11 65.9
Msa1292510 AT3G15980.1 28.230 209 136 6 245 449 82 280 1.25e-17 86.7
Msa1292510 AT3G15980.1 25.385 260 187 7 218 472 11 268 1.85e-15 79.7
Msa1292510 AT3G15980.1 24.432 176 127 4 205 375 82 256 2.29e-11 66.6
Msa1292510 AT3G15980.1 25.862 174 125 3 205 374 124 297 5.51e-11 65.5
Msa1292510 AT3G15980.5 28.230 209 136 6 245 449 82 280 1.28e-17 86.7
Msa1292510 AT3G15980.5 25.385 260 187 7 218 472 11 268 2.13e-15 79.7
Msa1292510 AT3G15980.5 24.432 176 127 4 205 375 82 256 2.70e-11 66.6
Msa1292510 AT3G15980.5 25.862 174 125 3 205 374 124 297 5.80e-11 65.5
Msa1292510 AT1G52360.4 28.230 209 136 6 245 449 82 280 1.32e-17 86.7
Msa1292510 AT1G52360.4 25.000 256 185 7 222 472 15 268 7.21e-14 74.7
Msa1292510 AT1G52360.4 25.000 176 126 4 205 375 82 256 6.23e-12 68.6
Msa1292510 AT1G52360.4 26.250 160 115 2 218 374 138 297 5.00e-11 65.9
Msa1292510 AT1G52360.1 28.230 209 136 6 245 449 82 280 1.32e-17 86.7
Msa1292510 AT1G52360.1 25.000 256 185 7 222 472 15 268 7.21e-14 74.7
Msa1292510 AT1G52360.1 25.000 176 126 4 205 375 82 256 6.23e-12 68.6
Msa1292510 AT1G52360.1 26.250 160 115 2 218 374 138 297 5.00e-11 65.9
Msa1292510 AT2G47410.6 29.596 223 121 6 257 443 47 269 1.33e-17 86.7
Msa1292510 AT2G47410.3 29.596 223 121 6 257 443 47 269 1.33e-17 86.7
Msa1292510 AT1G52360.3 28.230 209 136 6 245 449 82 280 1.36e-17 86.7
Msa1292510 AT1G52360.3 25.000 256 185 7 222 472 15 268 6.31e-14 75.1
Msa1292510 AT1G52360.3 25.000 176 126 4 205 375 82 256 5.41e-12 68.9
Msa1292510 AT1G52360.3 26.250 160 115 2 218 374 138 297 4.34e-11 65.9
Msa1292510 AT3G15980.3 28.230 209 136 6 245 449 82 280 1.40e-17 86.3
Msa1292510 AT3G15980.3 25.385 260 187 7 218 472 11 268 2.42e-15 79.3
Msa1292510 AT3G15980.3 24.432 176 127 4 205 375 82 256 2.78e-11 66.6
Msa1292510 AT3G15980.3 25.862 174 125 3 205 374 124 297 6.14e-11 65.5
Msa1292510 AT3G15980.6 28.230 209 136 6 245 449 82 280 1.40e-17 86.3
Msa1292510 AT3G15980.6 25.385 260 187 7 218 472 11 268 2.42e-15 79.3
Msa1292510 AT3G15980.6 24.432 176 127 4 205 375 82 256 2.78e-11 66.6
Msa1292510 AT3G15980.6 25.862 174 125 3 205 374 124 297 6.14e-11 65.5
Msa1292510 AT3G15980.2 28.230 209 136 6 245 449 82 280 1.40e-17 86.3
Msa1292510 AT3G15980.2 25.385 260 187 7 218 472 11 268 2.42e-15 79.3
Msa1292510 AT3G15980.2 24.432 176 127 4 205 375 82 256 2.78e-11 66.6
Msa1292510 AT3G15980.2 25.862 174 125 3 205 374 124 297 6.14e-11 65.5
Msa1292510 AT3G15980.4 28.230 209 136 6 245 449 82 280 1.40e-17 86.3
Msa1292510 AT3G15980.4 25.385 260 187 7 218 472 11 268 2.42e-15 79.3
Msa1292510 AT3G15980.4 24.432 176 127 4 205 375 82 256 2.78e-11 66.6
Msa1292510 AT3G15980.4 25.862 174 125 3 205 374 124 297 6.14e-11 65.5
Msa1292510 AT1G52360.2 28.230 209 136 6 245 449 126 324 1.43e-17 86.3
Msa1292510 AT1G52360.2 25.000 256 185 7 222 472 59 312 6.73e-14 74.7
Msa1292510 AT1G52360.2 25.000 176 126 4 205 375 126 300 6.01e-12 68.6
Msa1292510 AT1G52360.2 26.250 160 115 2 218 374 182 341 5.59e-11 65.5
Msa1292510 AT2G47410.5 29.596 223 121 6 257 443 229 451 1.86e-17 86.3
Msa1292510 AT4G32990.1 26.523 279 155 12 212 460 10 268 1.43e-16 81.3
Msa1292510 AT4G32990.2 26.523 279 155 12 212 460 10 268 1.54e-16 80.5
Msa1292510 AT4G34460.3 24.597 248 162 8 193 418 78 322 2.00e-15 77.8
Msa1292510 AT5G49430.2 34.400 125 79 1 257 378 238 362 2.68e-15 79.3
Msa1292510 AT5G49430.1 34.400 125 79 1 257 378 238 362 2.68e-15 79.3
Msa1292510 AT3G18140.1 25.623 281 146 10 238 462 8 281 3.88e-15 76.6
Msa1292510 AT2G21390.1 26.380 163 119 1 256 418 1 162 4.03e-15 79.0
Msa1292510 AT2G21390.1 23.466 277 179 7 215 461 2 275 2.35e-13 73.2
Msa1292510 AT3G18860.1 26.721 247 156 12 234 468 30 263 8.64e-15 77.4
Msa1292510 AT3G18860.1 28.384 229 147 10 194 421 85 297 2.73e-13 72.8
Msa1292510 AT3G18860.2 26.721 247 156 12 234 468 30 263 9.11e-15 77.4
Msa1292510 AT3G18860.2 28.384 229 147 10 194 421 85 297 2.96e-13 72.8
Msa1292510 AT1G15440.2 26.957 230 157 5 162 386 334 557 2.31e-14 76.3
Msa1292510 AT1G15440.2 26.515 132 95 2 320 451 321 450 6.76e-11 65.5
Msa1292510 AT1G15440.1 26.957 230 157 5 162 386 374 597 2.81e-14 75.9
Msa1292510 AT1G15440.1 26.515 132 95 2 320 451 361 490 7.71e-11 65.1
Msa1292510 AT1G62020.1 25.767 163 120 1 256 418 1 162 3.19e-14 75.9
Msa1292510 AT1G62020.1 23.297 279 181 7 215 463 2 277 2.21e-12 70.1
Msa1292510 AT1G73720.1 26.496 234 146 6 256 464 204 436 3.55e-14 75.1
Msa1292510 AT1G73720.1 30.435 161 102 4 314 466 221 379 3.05e-12 68.9
Msa1292510 AT1G73720.1 24.390 287 187 8 210 473 201 480 1.30e-11 67.0
Msa1292510 AT3G21540.1 30.857 175 115 3 203 376 525 694 5.61e-13 72.0
Msa1292510 AT3G21540.1 27.451 153 109 2 309 461 543 693 4.75e-11 65.9
Msa1292510 AT4G22910.1 27.459 244 166 9 237 474 231 469 6.25e-13 71.2
Msa1292510 AT5G08560.1 21.756 262 197 5 162 418 301 559 1.87e-12 70.1
Msa1292510 AT5G08560.2 21.756 262 197 5 162 418 301 559 1.87e-12 70.1
Msa1292510 AT5G08560.3 21.756 262 197 5 162 418 301 559 1.87e-12 70.1
Msa1292510 AT2G16780.1 29.333 150 97 4 278 418 183 332 1.90e-12 69.3
Msa1292510 AT5G43920.1 26.230 244 162 9 187 418 276 513 3.35e-12 68.9
Msa1292510 AT5G43920.1 24.483 290 201 9 188 464 232 516 2.58e-11 66.2
Msa1292510 AT4G21130.1 27.368 190 114 5 292 461 131 316 4.87e-12 68.2
Msa1292510 AT3G42660.1 25.714 210 146 5 183 383 65 273 4.89e-12 68.9
Msa1292510 AT1G80710.1 29.439 214 131 10 228 425 220 429 8.87e-12 67.8
Msa1292510 AT1G49040.1 28.000 225 152 7 240 461 872 1089 9.56e-12 68.2
Msa1292510 AT4G35050.1 32.000 150 93 5 278 418 184 333 1.06e-11 67.0
Msa1292510 AT1G10580.1 26.271 236 145 7 215 432 275 499 1.09e-11 67.4
Msa1292510 AT5G54520.1 26.016 246 150 9 209 432 148 383 1.77e-11 66.6
Msa1292510 AT5G64730.1 22.993 274 166 8 188 418 26 297 2.29e-11 65.1
Msa1292510 AT3G05090.2 23.333 210 157 2 195 400 98 307 3.62e-11 66.2
Msa1292510 AT3G05090.3 23.333 210 157 2 195 400 98 307 3.62e-11 66.2
Msa1292510 AT3G05090.1 23.333 210 157 2 195 400 98 307 3.62e-11 66.2
Msa1292510 AT4G33260.1 27.411 197 127 7 236 419 142 335 8.34e-11 64.3
Msa1292510 AT5G60940.2 22.635 296 206 8 188 461 39 333 9.30e-11 63.5
Msa1292510 AT4G33260.2 27.411 197 127 7 236 419 142 335 9.46e-11 64.3

Find 129 sgRNAs with CRISPR-Local

Find 475 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGGAATCATGGAAGTTAATA+AGG 0.230110 8_3:+48859787 Msa1292510:exon
TCATCCTCAGCCTCGTCTTT+TGG 0.235189 8_3:-48860100 None:intergenic
GGTCATAGTATAAGTGTATT+TGG 0.243871 8_3:+48860794 Msa1292510:CDS
GGAGATGTTCGTCGACTTAC+TGG 0.246881 8_3:+48860325 Msa1292510:CDS
GTGAGCCAATTACCTTCTTT+AGG 0.261874 8_3:+48859960 Msa1292510:CDS
CGTTCTCCCGTGATGGAAAA+AGG 0.273081 8_3:+48860353 Msa1292510:CDS
GTTAGTTCTGTGGATGTTCT+TGG 0.292073 8_3:+48861395 Msa1292510:CDS
AAGCATGTGAAGAGACTATC+AGG 0.302447 8_3:+48861359 Msa1292510:CDS
AAGATAACACTTGTCGCATT+TGG 0.305670 8_3:+48861086 Msa1292510:CDS
TGAGCCAATTACCTTCTTTA+GGG 0.310985 8_3:+48859961 Msa1292510:CDS
CTCTCCCTAAAGAAGGTAAT+TGG 0.328572 8_3:-48859965 None:intergenic
AGACAGGTTGCGGATGATTA+TGG 0.341718 8_3:+48860003 Msa1292510:CDS
TTGCTAAATATTCTTTAGTA+AGG 0.343561 8_3:+48860182 Msa1292510:CDS
AATCTCGAATTTAGTGAAAT+CGG 0.360706 8_3:+48860304 Msa1292510:CDS
CCTCACTGCCATGTCATTTG+TGG 0.370445 8_3:-48859918 None:intergenic
ATGACAAGACATGGATGTTA+TGG 0.373725 8_3:+48860735 Msa1292510:CDS
CGCATTGCCTTCCATCCATC+AGG 0.374107 8_3:+48860689 Msa1292510:CDS
AATGATATACGATTTGTAGA+AGG 0.381621 8_3:+48865607 Msa1292510:three_prime_UTR
AAGATGCTCTGGCTCGTGTA+TGG 0.388969 8_3:+48860861 Msa1292510:CDS
CCGGATCATCTCTTCTTCTC+CGG 0.402604 8_3:-48860228 None:intergenic
ACAAATGTTAACAAGTGAAA+TGG 0.405626 8_3:-48865865 None:intergenic
AGATAACACTTGTCGCATTT+GGG 0.409762 8_3:+48861087 Msa1292510:CDS
CCATCCATCAGGGAAGTACT+TGG 0.410983 8_3:+48860700 Msa1292510:CDS
CTGACCGGACAGCAAACTAT+TGG 0.411826 8_3:+48860612 Msa1292510:CDS
ACGCTCGGTGTGCCCCTTGA+AGG 0.414199 8_3:-48860534 None:intergenic
TAGTATAAGTGTATTTGGTT+TGG 0.447495 8_3:+48860799 Msa1292510:CDS
TAGACTAGTGAGGGAGCGGC+AGG 0.452210 8_3:+48859841 Msa1292510:CDS
CTTCTTTAGGGAGAGGGAGA+TGG 0.456101 8_3:+48859973 Msa1292510:CDS
CTCACTGCCATGTCATTTGT+GGG 0.461184 8_3:-48859917 None:intergenic
ATGTTATGGGACGTTGAAAC+AGG 0.465419 8_3:+48860749 Msa1292510:CDS
ATGTATTCTGCAGATGGTGG+TGG 0.465615 8_3:+48865490 Msa1292510:intron
CGGATCATCTCTTCTTCTCC+GGG 0.465818 8_3:-48860227 None:intergenic
AACCTCAGGTTTGGTCAGGC+CGG 0.465885 8_3:+48861330 Msa1292510:intron
TTTGAGCCTTCATTGTGAAA+AGG 0.468938 8_3:-48860133 None:intergenic
ACCTCAGGTTTGGTCAGGCC+GGG 0.469932 8_3:+48861331 Msa1292510:intron
TGTTAACCTCAGGTTTGGTC+AGG 0.470352 8_3:+48861326 Msa1292510:intron
TTCTGATATCTCATACTCTC+TGG 0.471920 8_3:-48859813 None:intergenic
TAATTTAGAGTGAGCGGGAA+TGG 0.472743 8_3:-48861137 None:intergenic
ATCTTGTGGAAAAGATGCTC+TGG 0.473143 8_3:+48860850 Msa1292510:CDS
TGACAAGACATGGATGTTAT+GGG 0.474842 8_3:+48860736 Msa1292510:CDS
ACAGCTTTATCGTGCGATCA+TGG 0.491451 8_3:-48865531 None:intergenic
GCTGGATGCTGATGGACAGC+TGG 0.497589 8_3:+48860030 Msa1292510:CDS
GGGAGATGGAGAGACGAGAC+AGG 0.499314 8_3:+48859987 Msa1292510:CDS
CTCTTCTTCTCCGGGCACGT+TGG 0.499592 8_3:-48860219 None:intergenic
CCGGAGAAGAAGAGATGATC+CGG 0.501652 8_3:+48860228 Msa1292510:CDS
AGAAGCGTTCTAGCACTAGA+AGG 0.501755 8_3:+48860899 Msa1292510:CDS
TCTGCATCCACATCTTCATC+CGG 0.502101 8_3:-48860247 None:intergenic
GGTTGCTCGTTCTCCCGTGA+TGG 0.506079 8_3:+48860346 Msa1292510:CDS
CTTGGTTGTCATGTCATATG+AGG 0.506803 8_3:-48861209 None:intergenic
TGGTGGTGGGTATATTGTTA+CGG 0.510286 8_3:+48865504 Msa1292510:CDS
TGGAGAGACGAGACAGGTTG+CGG 0.513395 8_3:+48859993 Msa1292510:CDS
ATTAGGCATGCTCCACAACT+TGG 0.513738 8_3:-48860495 None:intergenic
CAATTACCTTCTTTAGGGAG+AGG 0.517158 8_3:+48859966 Msa1292510:CDS
AAAGCTAATTAAAGCTCTTG+AGG 0.519301 8_3:+48860054 Msa1292510:CDS
CATTCCAATAGTTTGCTGTC+CGG 0.520671 8_3:-48860616 None:intergenic
GATATTAATTTAGAGTGAGC+GGG 0.522967 8_3:-48861142 None:intergenic
CATACTATGGATGTTGACTA+AGG 0.523420 8_3:+48865577 Msa1292510:CDS
ATGTGGATGCAGAGATGGAT+TGG 0.524601 8_3:+48860257 Msa1292510:CDS
TCTTCACATGCTTAAAGTCC+CGG 0.525123 8_3:-48861349 None:intergenic
GGAATCATGGAAGTTAATAA+GGG 0.527623 8_3:+48859788 Msa1292510:exon
AGAGTAGACTAGTGAGGGAG+CGG 0.528280 8_3:+48859837 Msa1292510:CDS
GAGGAGTTACTTCTTCAAGA+AGG 0.528917 8_3:+48860773 Msa1292510:CDS
CACAAATGACATGGCAGTGA+GGG 0.529130 8_3:+48859919 Msa1292510:CDS
AATTACCTTCTTTAGGGAGA+GGG 0.530532 8_3:+48859967 Msa1292510:CDS
TGCAACATCAGTAGCACGCT+CGG 0.532762 8_3:-48860549 None:intergenic
TAGCAACTGCCTCTGCTGAC+CGG 0.536136 8_3:+48860597 Msa1292510:CDS
TGCTAAATATTCTTTAGTAA+GGG 0.536648 8_3:+48860183 Msa1292510:CDS
ACTAGAAGGTCATGTCAAAC+CGG 0.536714 8_3:+48860913 Msa1292510:CDS
TACTCCAAAAGACGAGGCTG+AGG 0.539532 8_3:+48860096 Msa1292510:CDS
AGATGCTCTGGCTCGTGTAT+GGG 0.543006 8_3:+48860862 Msa1292510:CDS
GCGGATGATTATGGCAAAGC+TGG 0.544053 8_3:+48860012 Msa1292510:CDS
GATGGATTGGACATTGAAGC+AGG 0.547516 8_3:+48860270 Msa1292510:CDS
AGGGCCCGTCTTCACCATCT+TGG 0.550290 8_3:+48859938 Msa1292510:CDS
GTGGCTAACTGATATCCGTT+AGG 0.551574 8_3:-48861055 None:intergenic
CTCACCAAGATGGTGAAGAC+GGG 0.552806 8_3:-48859942 None:intergenic
AGTTCTGTGGATGTTCTTGG+AGG 0.553022 8_3:+48861398 Msa1292510:CDS
CAAATTCTCTCCTCGATGCA+AGG 0.556022 8_3:+48860152 Msa1292510:CDS
GCTAAATGATTATTGTGCAC+CGG 0.557163 8_3:-48860578 None:intergenic
GTGCCCAAGTACTTCCCTGA+TGG 0.558865 8_3:-48860704 None:intergenic
CATCTCCCTCTCCCTAAAGA+AGG 0.559690 8_3:-48859972 None:intergenic
AGAAGAGAGTAGACTAGTGA+GGG 0.561487 8_3:+48859832 Msa1292510:CDS
ATGCTCACTGGTAAAACCGC+TGG 0.563669 8_3:-48865557 None:intergenic
TGAAGATGTGGATGCAGAGA+TGG 0.564479 8_3:+48860252 Msa1292510:CDS
AGGTAATTGGCTCACCAAGA+TGG 0.567255 8_3:-48859952 None:intergenic
TAACTGGAGCTACCAAGTTG+TGG 0.574232 8_3:+48860483 Msa1292510:CDS
TACTGATGTTGCATATTCTC+CGG 0.574958 8_3:+48860559 Msa1292510:CDS
GTGAGCGGGAATGGTGTACA+AGG 0.575996 8_3:-48861128 None:intergenic
GCTCACCAAGATGGTGAAGA+CGG 0.578956 8_3:-48859943 None:intergenic
CATTGCGTATCCAACGTGCC+CGG 0.580285 8_3:+48860209 Msa1292510:CDS
CTTGTCGCATTTGGGACTTG+AGG 0.581005 8_3:+48861095 Msa1292510:CDS
GGATCGTTAGCAGCATCTTG+TGG 0.590492 8_3:+48860836 Msa1292510:CDS
GTACTTCCCTGATGGATGGA+AGG 0.591166 8_3:-48860696 None:intergenic
TGATATTAATTTAGAGTGAG+CGG 0.592127 8_3:-48861143 None:intergenic
AACATCCATAGTATGCTCAC+TGG 0.592453 8_3:-48865569 None:intergenic
AACGGATATCAGTTAGCCAC+CGG 0.593882 8_3:+48861058 Msa1292510:CDS
CAGAAGAGAGTAGACTAGTG+AGG 0.594121 8_3:+48859831 Msa1292510:CDS
TAAAGCTCTTGAGGATGAAG+AGG 0.597314 8_3:+48860063 Msa1292510:CDS
CTGCTAGCGATGACAAGACA+TGG 0.599501 8_3:+48860726 Msa1292510:CDS
TGTATTCTGCAGATGGTGGT+GGG 0.603223 8_3:+48865491 Msa1292510:intron
ACAAGTGTTATCTTCACCAC+CGG 0.606447 8_3:-48861077 None:intergenic
CCAAGTACTTCCCTGATGGA+TGG 0.606521 8_3:-48860700 None:intergenic
TGGAAGGCAATGCGTGCAAG+AGG 0.610199 8_3:-48860680 None:intergenic
GTCAAATTCGAGCCACATGA+GGG 0.610380 8_3:+48861169 Msa1292510:CDS
CTAGCTACAGAATCAAGCTA+AGG 0.610473 8_3:-48865675 None:intergenic
GAACGCTTCTATCAGTTCGA+AGG 0.611917 8_3:-48860886 None:intergenic
ATGGCAAAGCTGGATGCTGA+TGG 0.612950 8_3:+48860022 Msa1292510:CDS
CATCCATCAGGGAAGTACTT+GGG 0.615094 8_3:+48860701 Msa1292510:CDS
AGTCAAATTCGAGCCACATG+AGG 0.620772 8_3:+48861168 Msa1292510:CDS
AGATGATCCGGATGAAGATG+TGG 0.621814 8_3:+48860240 Msa1292510:CDS
TGCAAGACCTCATGATGAGG+AGG 0.623658 8_3:+48859873 Msa1292510:CDS
ACGATAAAGCTGTGGTCCAG+CGG 0.624106 8_3:+48865541 Msa1292510:CDS
TGTTGTTCCCACAAATGACA+TGG 0.624930 8_3:+48859910 Msa1292510:CDS
TTGATTCTGTAGCTAGCCTG+TGG 0.625212 8_3:+48865682 Msa1292510:three_prime_UTR
TAGTAGATATGTGATACCAC+AGG 0.634069 8_3:-48865698 None:intergenic
GTTTGCTGTCCGGTCAGCAG+AGG 0.638239 8_3:-48860606 None:intergenic
CAATGCAAGACCTCATGATG+AGG 0.644562 8_3:+48859870 Msa1292510:CDS
AGAGAATCAGAAACAGAGAG+AGG 0.664811 8_3:-48859397 None:intergenic
CAGCACGCCTCCTCATCATG+AGG 0.667483 8_3:-48859880 None:intergenic
CTCATATGACATGACAACCA+AGG 0.670941 8_3:+48861210 Msa1292510:CDS
CCACAAATGACATGGCAGTG+AGG 0.672810 8_3:+48859918 Msa1292510:CDS
AGTGTTATCTTCACCACCGG+TGG 0.674956 8_3:-48861074 None:intergenic
TGAAGATAGAGTTAGTTCTG+TGG 0.674995 8_3:+48861385 Msa1292510:CDS
GGATATCAGTTAGCCACCGG+TGG 0.677482 8_3:+48861061 Msa1292510:CDS
ATGGGACGTTGAAACAGGAG+AGG 0.682390 8_3:+48860754 Msa1292510:CDS
AACTTCTACTCCAAAAGACG+AGG 0.686425 8_3:+48860090 Msa1292510:CDS
GCATTGCCTTCCATCCATCA+GGG 0.687750 8_3:+48860690 Msa1292510:CDS
ATGATCGCACGATAAAGCTG+TGG 0.691055 8_3:+48865533 Msa1292510:CDS
AGCATGTGAAGAGACTATCA+GGG 0.712401 8_3:+48861360 Msa1292510:CDS
CAATATCAATCCTTGCATCG+AGG 0.713686 8_3:-48860162 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGAAAAAAATAATAAGATA+AGG - chr8_3:48859559-48859578 None:intergenic 10.0%
!! AATATAGTTAATAAAAATCA+GGG - chr8_3:48861970-48861989 None:intergenic 10.0%
!! AAATATAGTTAATAAAAATC+AGG - chr8_3:48861971-48861990 None:intergenic 10.0%
!! AAAATTAGTTAAAATAATCT+AGG - chr8_3:48862030-48862049 None:intergenic 10.0%
!!! TTTTTTTTTTAAAATAGAGA+AGG + chr8_3:48863359-48863378 Msa1292510:intron 10.0%
!! AGTATGTATTTATATAAAAA+AGG - chr8_3:48865845-48865864 None:intergenic 10.0%
!!! TAATTTCTTTCTTTTTTTAC+TGG + chr8_3:48859762-48859781 Msa1292510:intron 15.0%
!! ATAAAGAAATTATACATTTG+TGG + chr8_3:48861443-48861462 Msa1292510:intron 15.0%
!! GAATTAAAAAAGTTAACTAA+AGG + chr8_3:48861571-48861590 Msa1292510:intron 15.0%
!! TATTATATTCATCTATAACA+TGG - chr8_3:48862962-48862981 None:intergenic 15.0%
!!! TTTAGTTTAAATGCAAAATA+AGG - chr8_3:48864210-48864229 None:intergenic 15.0%
!! TTAATACTTACTATAATGTT+TGG + chr8_3:48864412-48864431 Msa1292510:intron 15.0%
!! TGTGCAATATATAATATAAT+AGG - chr8_3:48865420-48865439 None:intergenic 15.0%
!! GAATAGAAAGAAAGTAAAAT+AGG - chr8_3:48859498-48859517 None:intergenic 20.0%
!! AATAATACCAATAACATTCA+AGG - chr8_3:48859591-48859610 None:intergenic 20.0%
!! TTGCTAAATATTCTTTAGTA+AGG + chr8_3:48860182-48860201 Msa1292510:CDS 20.0%
!! TGCTAAATATTCTTTAGTAA+GGG + chr8_3:48860183-48860202 Msa1292510:CDS 20.0%
!!! GTAGAAACTTTTTTTACATT+AGG - chr8_3:48860515-48860534 None:intergenic 20.0%
!!! ATCTCTTTTAAGAACATTTA+AGG + chr8_3:48860646-48860665 Msa1292510:CDS 20.0%
!!! TCTCTTTTAAGAACATTTAA+GGG + chr8_3:48860647-48860666 Msa1292510:CDS 20.0%
!! TACAAGAATATAGTTATTCT+AGG - chr8_3:48861258-48861277 None:intergenic 20.0%
!! AACACATAAATAAGGAAAAA+GGG - chr8_3:48861483-48861502 None:intergenic 20.0%
!! TAACACATAAATAAGGAAAA+AGG - chr8_3:48861484-48861503 None:intergenic 20.0%
!! AATGGAATAACACATAAATA+AGG - chr8_3:48861491-48861510 None:intergenic 20.0%
!!! TACATGAAATGTGTAATTTT+CGG + chr8_3:48861675-48861694 Msa1292510:intron 20.0%
!!! TTTTTTCAATGAATTTTCCA+GGG - chr8_3:48861711-48861730 None:intergenic 20.0%
!!! TTTTTTTCAATGAATTTTCC+AGG - chr8_3:48861712-48861731 None:intergenic 20.0%
!! AAGAAAGAAAACATACAAAT+TGG + chr8_3:48861881-48861900 Msa1292510:intron 20.0%
!! AGAAAGAAAACATACAAATT+GGG + chr8_3:48861882-48861901 Msa1292510:intron 20.0%
!! TTAAGGTTTATTTCCTAAAT+GGG - chr8_3:48861922-48861941 None:intergenic 20.0%
!!! ATTTTTGTGCTAGTATTATT+AGG + chr8_3:48862056-48862075 Msa1292510:intron 20.0%
!!! TATGTATATTTTAAAGGGAA+AGG + chr8_3:48862329-48862348 Msa1292510:intron 20.0%
!!! ATGTATATTTTAAAGGGAAA+GGG + chr8_3:48862330-48862349 Msa1292510:intron 20.0%
!! TAATCATGTATTATAGCTAT+GGG - chr8_3:48863328-48863347 None:intergenic 20.0%
!! ATAATCATGTATTATAGCTA+TGG - chr8_3:48863329-48863348 None:intergenic 20.0%
!! AGCCTTTAATAATAAAAGTA+CGG - chr8_3:48864762-48864781 None:intergenic 20.0%
!!! AATCTCTGTTATTATAGTTT+TGG - chr8_3:48865015-48865034 None:intergenic 20.0%
!! TTCTAACAAAAATGATGAAT+CGG - chr8_3:48865640-48865659 None:intergenic 20.0%
! AATCTCGAATTTAGTGAAAT+CGG + chr8_3:48860304-48860323 Msa1292510:CDS 25.0%
!! GTATGTTCTTTTTGCAAATT+GGG + chr8_3:48860387-48860406 Msa1292510:intron 25.0%
! AGAGAACTAGAAAAGAAAAA+GGG - chr8_3:48860464-48860483 None:intergenic 25.0%
! TAGAGAACTAGAAAAGAAAA+AGG - chr8_3:48860465-48860484 None:intergenic 25.0%
! AAAAAAAGTTTCTACCTTCA+AGG + chr8_3:48860520-48860539 Msa1292510:CDS 25.0%
! AAAAAAGTTTCTACCTTCAA+GGG + chr8_3:48860521-48860540 Msa1292510:CDS 25.0%
! TAGTATAAGTGTATTTGGTT+TGG + chr8_3:48860799-48860818 Msa1292510:CDS 25.0%
! CTGAAAATGAAATTCAAGAA+TGG - chr8_3:48861014-48861033 None:intergenic 25.0%
!! TGATATTAATTTAGAGTGAG+CGG - chr8_3:48861146-48861165 None:intergenic 25.0%
! TATATTTATGTGTTAACCTC+AGG + chr8_3:48861316-48861335 Msa1292510:intron 25.0%
! ACACATCAATCACATAATAA+TGG - chr8_3:48861509-48861528 None:intergenic 25.0%
!! ACATGAAATGTGTAATTTTC+GGG + chr8_3:48861676-48861695 Msa1292510:intron 25.0%
!!! TTTTTCAATGAATTTTCCAG+GGG - chr8_3:48861710-48861729 None:intergenic 25.0%
! GAAAGAAAACATACAAATTG+GGG + chr8_3:48861883-48861902 Msa1292510:intron 25.0%
! AAAGAAAACATACAAATTGG+GGG + chr8_3:48861884-48861903 Msa1292510:intron 25.0%
! CTTAAGGTTTATTTCCTAAA+TGG - chr8_3:48861923-48861942 None:intergenic 25.0%
! TAGGAAATAAACCTTAAGTT+AGG + chr8_3:48861925-48861944 Msa1292510:intron 25.0%
! TAGTAAAAGTTAGTAAACTG+TGG + chr8_3:48862393-48862412 Msa1292510:intron 25.0%
! AGTAAAAGTTAGTAAACTGT+GGG + chr8_3:48862394-48862413 Msa1292510:intron 25.0%
! AAAGAGAAAATTAGGTTAAG+AGG - chr8_3:48862733-48862752 None:intergenic 25.0%
! TTTCACTTTCTTATCATTCA+AGG + chr8_3:48862799-48862818 Msa1292510:intron 25.0%
!!! TCTAATAACTCTCATTTTTG+TGG + chr8_3:48862882-48862901 Msa1292510:intron 25.0%
! AATCATGTATTATAGCTATG+GGG - chr8_3:48863327-48863346 None:intergenic 25.0%
! TTAAGACTAATTATTCTCCT+TGG + chr8_3:48863558-48863577 Msa1292510:intron 25.0%
! GAAAATTATCTGTGGTATTA+AGG + chr8_3:48863681-48863700 Msa1292510:intron 25.0%
!! AAATTATCTTTGTGGTGTTA+AGG + chr8_3:48863848-48863867 Msa1292510:intron 25.0%
!!! AAATTATCTTTAAGGTGTTG+AGG + chr8_3:48863932-48863951 Msa1292510:intron 25.0%
! TAAATCAATCTTTGTGGTTT+AGG + chr8_3:48864005-48864024 Msa1292510:intron 25.0%
! AAATCAATCTTTGTGGTTTA+GGG + chr8_3:48864006-48864025 Msa1292510:intron 25.0%
! GTAGAAATTTACTTTAATGG+TGG + chr8_3:48864039-48864058 Msa1292510:intron 25.0%
! AAATTTACTTTAATGGTGGT+AGG + chr8_3:48864043-48864062 Msa1292510:intron 25.0%
! AATTTACTTTAATGGTGGTA+GGG + chr8_3:48864044-48864063 Msa1292510:intron 25.0%
!! CACCGTACTTTTATTATTAA+AGG + chr8_3:48864757-48864776 Msa1292510:intron 25.0%
! ATCTCTTAAAATAGTGACAT+AGG + chr8_3:48864978-48864997 Msa1292510:intron 25.0%
!! TTTTGTCATGTTGAAAAATG+AGG + chr8_3:48865132-48865151 Msa1292510:intron 25.0%
! ATATGAAAAGGCTATGTAAA+AGG - chr8_3:48865168-48865187 None:intergenic 25.0%
!! TTTTACATAGCCTTTTCATA+TGG + chr8_3:48865167-48865186 Msa1292510:intron 25.0%
! AGATTATAAGCCATATGAAA+AGG - chr8_3:48865180-48865199 None:intergenic 25.0%
!! AATGATAATGTTTCGAAAAC+AGG - chr8_3:48865246-48865265 None:intergenic 25.0%
! AATGATATACGATTTGTAGA+AGG + chr8_3:48865607-48865626 Msa1292510:three_prime_UTR 25.0%
AAACAAATAGAGAAAGGAAG+CGG - chr8_3:48859472-48859491 None:intergenic 30.0%
AGGCATAAACAAATAGAGAA+AGG - chr8_3:48859478-48859497 None:intergenic 30.0%
TTCGTTTCCTTGAATGTTAT+TGG + chr8_3:48859581-48859600 Msa1292510:intron 30.0%
! AATGCCTTTTATATCCAACT+TGG + chr8_3:48859692-48859711 Msa1292510:intron 30.0%
! GAATCCAAGTTGGATATAAA+AGG - chr8_3:48859699-48859718 None:intergenic 30.0%
ATCAACATTAGAATCCAAGT+TGG - chr8_3:48859709-48859728 None:intergenic 30.0%
!!! TCTTTCTTTTTTTACTGGCT+AGG + chr8_3:48859767-48859786 Msa1292510:intron 30.0%
AGGAATCATGGAAGTTAATA+AGG + chr8_3:48859787-48859806 Msa1292510:exon 30.0%
GGAATCATGGAAGTTAATAA+GGG + chr8_3:48859788-48859807 Msa1292510:exon 30.0%
AAAGCTAATTAAAGCTCTTG+AGG + chr8_3:48860054-48860073 Msa1292510:CDS 30.0%
ATTTGCAAAAAGAACATACC+AGG - chr8_3:48860386-48860405 None:intergenic 30.0%
! GGTATGTTCTTTTTGCAAAT+TGG + chr8_3:48860386-48860405 Msa1292510:intron 30.0%
!!! TTCTTTTCTAGTTCTCTAAC+TGG + chr8_3:48860467-48860486 Msa1292510:intron 30.0%
AAAAAGTTTCTACCTTCAAG+GGG + chr8_3:48860522-48860541 Msa1292510:CDS 30.0%
GGTCATAGTATAAGTGTATT+TGG + chr8_3:48860794-48860813 Msa1292510:CDS 30.0%
!! ATGATGGATAAATGAGAAGA+GGG - chr8_3:48860956-48860975 None:intergenic 30.0%
!! AATGATGGATAAATGAGAAG+AGG - chr8_3:48860957-48860976 None:intergenic 30.0%
TGGAAAAACAGATAGAATGA+TGG - chr8_3:48860972-48860991 None:intergenic 30.0%
! TTTTTCCATAGTATTTTGCC+AGG + chr8_3:48860984-48861003 Msa1292510:intron 30.0%
! GAATTTCATTTTCAGATTCG+TGG + chr8_3:48861019-48861038 Msa1292510:intron 30.0%
! GATATTAATTTAGAGTGAGC+GGG - chr8_3:48861145-48861164 None:intergenic 30.0%
! AGAAATAGAAAGGTATACCT+TGG - chr8_3:48861230-48861249 None:intergenic 30.0%
CTAGGTAGAAAGAAATAGAA+AGG - chr8_3:48861240-48861259 None:intergenic 30.0%
AAATTATACATTTGTGGCTC+TGG + chr8_3:48861449-48861468 Msa1292510:intron 30.0%
AATTCATCATGTACAAGTGA+AGG - chr8_3:48861556-48861575 None:intergenic 30.0%
! CATGAAATGTGTAATTTTCG+GGG + chr8_3:48861677-48861696 Msa1292510:intron 30.0%
!! GATTCTCTCCATTTTTCAAA+AGG + chr8_3:48861796-48861815 Msa1292510:intron 30.0%
!! TTTCCACTCCTTTTGAAAAA+TGG - chr8_3:48861807-48861826 None:intergenic 30.0%
AAAGAAAAAACCAACACTGA+TGG - chr8_3:48861833-48861852 None:intergenic 30.0%
AAGAAAACATACAAATTGGG+GGG + chr8_3:48861885-48861904 Msa1292510:intron 30.0%
! GTTTATTTCCTAAATGGGTT+TGG - chr8_3:48861917-48861936 None:intergenic 30.0%
!!! TTTCTGGTTTTCCTAACTTA+AGG - chr8_3:48861939-48861958 None:intergenic 30.0%
AAATAATCTAGGCATTTGTG+AGG - chr8_3:48862019-48862038 None:intergenic 30.0%
! AACTCTCTTTTGTATGTACT+TGG + chr8_3:48862193-48862212 Msa1292510:intron 30.0%
!! ATTTTAAAGGGAAAGGGAAA+TGG + chr8_3:48862336-48862355 Msa1292510:intron 30.0%
! TTTGAGTGTGACATTTTAGA+AGG + chr8_3:48862359-48862378 Msa1292510:intron 30.0%
!!! AGGGTTTTAAGAAGTTAAGT+GGG - chr8_3:48862500-48862519 None:intergenic 30.0%
!!! TAGGGTTTTAAGAAGTTAAG+TGG - chr8_3:48862501-48862520 None:intergenic 30.0%
TGTATGAGTGACATTAAATC+TGG + chr8_3:48862631-48862650 Msa1292510:intron 30.0%
GTATGAGTGACATTAAATCT+GGG + chr8_3:48862632-48862651 Msa1292510:intron 30.0%
AAAATTAGGTTAAGAGGCTA+GGG - chr8_3:48862727-48862746 None:intergenic 30.0%
!! AAGAAAGTGAAAGTTTTGAC+TGG - chr8_3:48862791-48862810 None:intergenic 30.0%
GTTTGTGAAACTGATGAATT+TGG + chr8_3:48863061-48863080 Msa1292510:intron 30.0%
AAACTGATGAATTTGGTATG+TGG + chr8_3:48863068-48863087 Msa1292510:intron 30.0%
! TCAAACTGATGTTTTGTCTA+CGG + chr8_3:48863101-48863120 Msa1292510:intron 30.0%
TAAACCACAAGGTAGATATA+GGG - chr8_3:48863160-48863179 None:intergenic 30.0%
TTAAACCACAAGGTAGATAT+AGG - chr8_3:48863161-48863180 None:intergenic 30.0%
!!! ACCATTTGTTTTGTTATCTC+TGG + chr8_3:48863299-48863318 Msa1292510:intron 30.0%
ACCAGAGATAACAAAACAAA+TGG - chr8_3:48863303-48863322 None:intergenic 30.0%
! TGAAACTATGAAACTCCTTT+TGG + chr8_3:48863429-48863448 Msa1292510:intron 30.0%
ATCAAATCACGATAGCTATA+TGG - chr8_3:48863464-48863483 None:intergenic 30.0%
TGCTATAATACGAGTAATCT+GGG - chr8_3:48863519-48863538 None:intergenic 30.0%
ATGCTATAATACGAGTAATC+TGG - chr8_3:48863520-48863539 None:intergenic 30.0%
AAATTAGAAGTTTCTCTCTG+TGG + chr8_3:48863599-48863618 Msa1292510:intron 30.0%
!! AAATCCACTTTTGTGGTTTA+GGG + chr8_3:48863810-48863829 Msa1292510:intron 30.0%
!! AAATCCACTTTTGTGGTTTA+GGG + chr8_3:48863810-48863829 Msa1292510:intron 30.0%
!! AAATCCACTTTTGTGGTTTA+GGG + chr8_3:48863810-48863829 Msa1292510:intron 30.0%
! AAAGATTGATTTAAACGCCA+CGG - chr8_3:48863998-48864017 None:intergenic 30.0%
GGCGTAGAAATTTACTTTAA+TGG + chr8_3:48864036-48864055 Msa1292510:intron 30.0%
TACTGAACAAATATGCAGAT+TGG - chr8_3:48864303-48864322 None:intergenic 30.0%
! TCGATGTTTAAAGCATACTT+TGG + chr8_3:48864499-48864518 Msa1292510:intron 30.0%
! CGATGTTTAAAGCATACTTT+GGG + chr8_3:48864500-48864519 Msa1292510:intron 30.0%
AGCAACATAATTTCCTTCTT+TGG + chr8_3:48864658-48864677 Msa1292510:intron 30.0%
GCAACATAATTTCCTTCTTT+GGG + chr8_3:48864659-48864678 Msa1292510:intron 30.0%
TGTATACATATTCCCAAAGA+AGG - chr8_3:48864674-48864693 None:intergenic 30.0%
AGGGATTAATAAACAGTGAT+TGG - chr8_3:48864785-48864804 None:intergenic 30.0%
! GTAGAGATCATTTTCATGAA+TGG - chr8_3:48865039-48865058 None:intergenic 30.0%
AAAATGAAAATCCATTGCTC+TGG - chr8_3:48865098-48865117 None:intergenic 30.0%
CATATTTCCAAACAAGTTCT+AGG - chr8_3:48865207-48865226 None:intergenic 30.0%
! CTAGAACTTGTTTGGAAATA+TGG + chr8_3:48865205-48865224 Msa1292510:intron 30.0%
! ATCTAGTTTATGTGCTTTGA+AGG + chr8_3:48865360-48865379 Msa1292510:intron 30.0%
!!! AGGTCTTCATTTTTTTCTTC+CGG + chr8_3:48865380-48865399 Msa1292510:intron 30.0%
CAAGAAAGGCAAAAATAACA+TGG - chr8_3:48865457-48865476 None:intergenic 30.0%
TACCAAAATCAGTACAAGAA+AGG - chr8_3:48865471-48865490 None:intergenic 30.0%
CAAAAATGATGAATCGGATT+AGG - chr8_3:48865634-48865653 None:intergenic 30.0%
TTTCTGATTCTCTCAATCGT+AGG + chr8_3:48859407-48859426 Msa1292510:intron 35.0%
TAAGATAAGGCAAAGCAGTA+CGG - chr8_3:48859546-48859565 None:intergenic 35.0%
!! TTTTTACTGGCTAGGAATCA+TGG + chr8_3:48859775-48859794 Msa1292510:intron 35.0%
TTCTGATATCTCATACTCTC+TGG - chr8_3:48859816-48859835 None:intergenic 35.0%
TGAGCCAATTACCTTCTTTA+GGG + chr8_3:48859961-48859980 Msa1292510:CDS 35.0%
! AATTACCTTCTTTAGGGAGA+GGG + chr8_3:48859967-48859986 Msa1292510:CDS 35.0%
! CAGTATCCTTTTCACAATGA+AGG + chr8_3:48860127-48860146 Msa1292510:CDS 35.0%
TTTGAGCCTTCATTGTGAAA+AGG - chr8_3:48860136-48860155 None:intergenic 35.0%
! TGTTCTTTTTGCAAATTGGG+CGG + chr8_3:48860390-48860409 Msa1292510:intron 35.0%
ATTAGACAAGGCAAGTAAGA+TGG - chr8_3:48860432-48860451 None:intergenic 35.0%
TACTGATGTTGCATATTCTC+CGG + chr8_3:48860559-48860578 Msa1292510:CDS 35.0%
GCTAAATGATTATTGTGCAC+CGG - chr8_3:48860581-48860600 None:intergenic 35.0%
ATGACAAGACATGGATGTTA+TGG + chr8_3:48860735-48860754 Msa1292510:CDS 35.0%
TGACAAGACATGGATGTTAT+GGG + chr8_3:48860736-48860755 Msa1292510:CDS 35.0%
GGCGATCTTTAATATCTTAC+CGG - chr8_3:48860935-48860954 None:intergenic 35.0%
AAGATAACACTTGTCGCATT+TGG + chr8_3:48861086-48861105 Msa1292510:CDS 35.0%
AGATAACACTTGTCGCATTT+GGG + chr8_3:48861087-48861106 Msa1292510:CDS 35.0%
TTATGTGTTAACCTCAGGTT+TGG + chr8_3:48861321-48861340 Msa1292510:intron 35.0%
!! TGAAGATAGAGTTAGTTCTG+TGG + chr8_3:48861385-48861404 Msa1292510:CDS 35.0%
!!! AAGGATGTTTTGAAATGCGA+AGG + chr8_3:48861590-48861609 Msa1292510:intron 35.0%
! TGTGTGTCAATGAGTTTTTG+TGG + chr8_3:48861650-48861669 Msa1292510:intron 35.0%
!! TCTCCATTTTTCAAAAGGAG+TGG + chr8_3:48861801-48861820 Msa1292510:intron 35.0%
AATCAGGGATGTTACATTTC+TGG - chr8_3:48861955-48861974 None:intergenic 35.0%
! TCTTTTGTATGTACTTGGCA+TGG + chr8_3:48862198-48862217 Msa1292510:intron 35.0%
GTGGGAAAATAAGTTATGAG+TGG + chr8_3:48862412-48862431 Msa1292510:intron 35.0%
GAGTGGTAAAAGAGAAGAAA+AGG + chr8_3:48862429-48862448 Msa1292510:intron 35.0%
ACTTCAGTGACATAATGTCA+CGG + chr8_3:48862556-48862575 Msa1292510:intron 35.0%
ACACAACAAAAACCTTTGTG+TGG - chr8_3:48862598-48862617 None:intergenic 35.0%
!! ACACAAAGGTTTTTGTTGTG+TGG + chr8_3:48862597-48862616 Msa1292510:intron 35.0%
ATTAAATCTGGGCCATACAA+AGG + chr8_3:48862643-48862662 Msa1292510:intron 35.0%
GAAAATTAGGTTAAGAGGCT+AGG - chr8_3:48862728-48862747 None:intergenic 35.0%
GCGTAGAGAAAGAGAAAATT+AGG - chr8_3:48862741-48862760 None:intergenic 35.0%
!!! AAAGTGAAAGTTTTGACTGG+AGG - chr8_3:48862788-48862807 None:intergenic 35.0%
TCAGTTTCGATTGAAGAGAT+TGG - chr8_3:48862847-48862866 None:intergenic 35.0%
AACTAGAAGTCTTACTAGGA+AGG + chr8_3:48862905-48862924 Msa1292510:intron 35.0%
AAGGAAAGTGACAAAGGTAA+GGG + chr8_3:48862924-48862943 Msa1292510:intron 35.0%
CTAACAAGAATACCTCCATT+AGG - chr8_3:48863185-48863204 None:intergenic 35.0%
TCGAAGTGAGTACACTTAAA+AGG - chr8_3:48863227-48863246 None:intergenic 35.0%
CCACTAACATAAAGAAACCA+AGG - chr8_3:48863578-48863597 None:intergenic 35.0%
CCTTGGTTTCTTTATGTTAG+TGG + chr8_3:48863575-48863594 Msa1292510:intron 35.0%
AAAATCCACTTTCGTGGTTT+AGG + chr8_3:48863644-48863663 Msa1292510:intron 35.0%
AAATCCACTTTCGTGGTTTA+GGG + chr8_3:48863645-48863664 Msa1292510:intron 35.0%
! ACAGATAATTTTCTACGCCA+CGG - chr8_3:48863674-48863693 None:intergenic 35.0%
!! AAAACCCACTTTTGTGGTTT+AGG + chr8_3:48863717-48863736 Msa1292510:intron 35.0%
!! AAACCCACTTTTGTGGTTTA+GGG + chr8_3:48863718-48863737 Msa1292510:intron 35.0%
!! AAATCCACTTTTGTGGCTTA+GGG + chr8_3:48863764-48863783 Msa1292510:intron 35.0%
!! GAAATCCACTTTTGTGGTTT+AGG + chr8_3:48863809-48863828 Msa1292510:intron 35.0%
GGCGTAGAAAATTATCTTTG+TGG + chr8_3:48863840-48863859 Msa1292510:intron 35.0%
!! GAAATCCACTTTTGTGGTTT+AGG + chr8_3:48863809-48863828 Msa1292510:intron 35.0%
!! AATCCACTTTTGTGGTTTAG+GGG + chr8_3:48863811-48863830 Msa1292510:intron 35.0%
AAAGATAATTTCCTACGCCA+CGG - chr8_3:48863923-48863942 None:intergenic 35.0%
GGCGTAGGAAATTATCTTTA+AGG + chr8_3:48863924-48863943 Msa1292510:intron 35.0%
!! GAAATCCACTTTTGTGGTTT+AGG + chr8_3:48863809-48863828 Msa1292510:intron 35.0%
GGCGTTTAAATCAATCTTTG+TGG + chr8_3:48863999-48864018 Msa1292510:intron 35.0%
! GGAGTATTTATTTGCCTTTG+TGG + chr8_3:48864079-48864098 Msa1292510:intron 35.0%
!!! TTTGTTTTGTGTCAGCTATG+TGG + chr8_3:48864170-48864189 Msa1292510:intron 35.0%
TATGCATGATTCCTTGATGA+AGG + chr8_3:48864557-48864576 Msa1292510:intron 35.0%
AGAACATACAACCTTCATCA+AGG - chr8_3:48864571-48864590 None:intergenic 35.0%
TTGGACAATAAGCAACAGAT+GGG - chr8_3:48864735-48864754 None:intergenic 35.0%
! ATAATAAAAGTACGGTGCCT+TGG - chr8_3:48864754-48864773 None:intergenic 35.0%
! GTCTAAGTTGTGGATTGAAA+GGG - chr8_3:48864804-48864823 None:intergenic 35.0%
! GTCTAAGTTGTGGATTGAAA+GGG - chr8_3:48864804-48864823 None:intergenic 35.0%
ATGGAAAGAGCTTGTAACAT+GGG - chr8_3:48864871-48864890 None:intergenic 35.0%
AAGGCAAGTAATGTTTGTCA+TGG - chr8_3:48864890-48864909 None:intergenic 35.0%
ACACTAATGGCTGAAAACAT+TGG - chr8_3:48864941-48864960 None:intergenic 35.0%
! TGTTTTCAGCCATTAGTGTT+AGG + chr8_3:48864942-48864961 Msa1292510:intron 35.0%
GTCTTTACACCTAACACTAA+TGG - chr8_3:48864954-48864973 None:intergenic 35.0%
! TCTTCAACCTAGAACTTGTT+TGG + chr8_3:48865197-48865216 Msa1292510:intron 35.0%
ATAGGCGCAATATATTTCAC+CGG - chr8_3:48865402-48865421 None:intergenic 35.0%
!!! TGCCTTTCTTGTACTGATTT+TGG + chr8_3:48865466-48865485 Msa1292510:intron 35.0%
TTTGGTATGTATTCTGCAGA+TGG + chr8_3:48865484-48865503 Msa1292510:intron 35.0%
! TTTTACCAGTGAGCATACTA+TGG + chr8_3:48865564-48865583 Msa1292510:CDS 35.0%
! CATACTATGGATGTTGACTA+AGG + chr8_3:48865577-48865596 Msa1292510:CDS 35.0%
TAGTAGATATGTGATACCAC+AGG - chr8_3:48865701-48865720 None:intergenic 35.0%
AGAGAATCAGAAACAGAGAG+AGG - chr8_3:48859400-48859419 None:intergenic 40.0%
AGAAGAGAGTAGACTAGTGA+GGG + chr8_3:48859832-48859851 Msa1292510:CDS 40.0%
TGTTGTTCCCACAAATGACA+TGG + chr8_3:48859910-48859929 Msa1292510:CDS 40.0%
GTGAGCCAATTACCTTCTTT+AGG + chr8_3:48859960-48859979 Msa1292510:CDS 40.0%
CTCTCCCTAAAGAAGGTAAT+TGG - chr8_3:48859968-48859987 None:intergenic 40.0%
! CAATTACCTTCTTTAGGGAG+AGG + chr8_3:48859966-48859985 Msa1292510:CDS 40.0%
TAAAGCTCTTGAGGATGAAG+AGG + chr8_3:48860063-48860082 Msa1292510:CDS 40.0%
!!! GTCTTTTGGAGTAGAAGTTG+CGG - chr8_3:48860089-48860108 None:intergenic 40.0%
AACTTCTACTCCAAAAGACG+AGG + chr8_3:48860090-48860109 Msa1292510:CDS 40.0%
CAATATCAATCCTTGCATCG+AGG - chr8_3:48860165-48860184 None:intergenic 40.0%
! TAGCAAGCCTTTTTCCATCA+CGG - chr8_3:48860363-48860382 None:intergenic 40.0%
GGGCATTAGAAGATTAGACA+AGG - chr8_3:48860444-48860463 None:intergenic 40.0%
!! CATTCCAATAGTTTGCTGTC+CGG - chr8_3:48860619-48860638 None:intergenic 40.0%
ATGTTATGGGACGTTGAAAC+AGG + chr8_3:48860749-48860768 Msa1292510:CDS 40.0%
GAGGAGTTACTTCTTCAAGA+AGG + chr8_3:48860773-48860792 Msa1292510:CDS 40.0%
!!! GGTTTGGCTTTTCATCATGA+TGG + chr8_3:48860815-48860834 Msa1292510:CDS 40.0%
ATCTTGTGGAAAAGATGCTC+TGG + chr8_3:48860850-48860869 Msa1292510:CDS 40.0%
ACTAGAAGGTCATGTCAAAC+CGG + chr8_3:48860913-48860932 Msa1292510:CDS 40.0%
AAATTCAAGAATGGTCAGCC+TGG - chr8_3:48861005-48861024 None:intergenic 40.0%
! GGCATCAGTTTTTCTCCTAA+CGG + chr8_3:48861040-48861059 Msa1292510:CDS 40.0%
ACAAGTGTTATCTTCACCAC+CGG - chr8_3:48861080-48861099 None:intergenic 40.0%
! TAATTTAGAGTGAGCGGGAA+TGG - chr8_3:48861140-48861159 None:intergenic 40.0%
ACCAAAAAGTAACCCTCATG+TGG - chr8_3:48861184-48861203 None:intergenic 40.0%
CTTGGTTGTCATGTCATATG+AGG - chr8_3:48861212-48861231 None:intergenic 40.0%
CTCATATGACATGACAACCA+AGG + chr8_3:48861210-48861229 Msa1292510:CDS 40.0%
TCTTCACATGCTTAAAGTCC+CGG - chr8_3:48861352-48861371 None:intergenic 40.0%
AAGCATGTGAAGAGACTATC+AGG + chr8_3:48861359-48861378 Msa1292510:CDS 40.0%
AGCATGTGAAGAGACTATCA+GGG + chr8_3:48861360-48861379 Msa1292510:CDS 40.0%
!! GTTAGTTCTGTGGATGTTCT+TGG + chr8_3:48861395-48861414 Msa1292510:CDS 40.0%
AATCCTTACCCCTTAGTCTA+CGG - chr8_3:48861780-48861799 None:intergenic 40.0%
!! GAGTGTGACATTTTAGAAGG+AGG + chr8_3:48862362-48862381 Msa1292510:intron 40.0%
TTAAGTGGGCACAAGTCATT+GGG - chr8_3:48862486-48862505 None:intergenic 40.0%
! CACTGAAGTATTATCCGCTA+GGG - chr8_3:48862545-48862564 None:intergenic 40.0%
! TCACTGAAGTATTATCCGCT+AGG - chr8_3:48862546-48862565 None:intergenic 40.0%
TGTCACGGTGACATTAAATC+TGG + chr8_3:48862571-48862590 Msa1292510:intron 40.0%
GTCACGGTGACATTAAATCT+GGG + chr8_3:48862572-48862591 Msa1292510:intron 40.0%
ATTAAATCTGGGCCACACAA+AGG + chr8_3:48862583-48862602 Msa1292510:intron 40.0%
GTCACTCATACAACACATCT+GGG - chr8_3:48862623-48862642 None:intergenic 40.0%
TGTCACTCATACAACACATC+TGG - chr8_3:48862624-48862643 None:intergenic 40.0%
ACACAACACACACCTTTGTA+TGG - chr8_3:48862658-48862677 None:intergenic 40.0%
! ATACAAAGGTGTGTGTTGTG+TGG + chr8_3:48862657-48862676 Msa1292510:intron 40.0%
GTGGCTCAGATTTAATGTCA+CGG + chr8_3:48862676-48862695 Msa1292510:intron 40.0%
TGACATTATGTCACCAAAGG+AGG + chr8_3:48862699-48862718 Msa1292510:intron 40.0%
!! TCGATTGAAGAGATTGGCTT+AGG - chr8_3:48862841-48862860 None:intergenic 40.0%
TGAGAGTTATTAGAGCGACA+AGG - chr8_3:48862876-48862895 None:intergenic 40.0%
GTGGAACTAGAAGTCTTACT+AGG + chr8_3:48862901-48862920 Msa1292510:intron 40.0%
ACTAGGAAGGAAAGTGACAA+AGG + chr8_3:48862918-48862937 Msa1292510:intron 40.0%
GAAGGAAAGTGACAAAGGTA+AGG + chr8_3:48862923-48862942 Msa1292510:intron 40.0%
TAAGCCCTATATCTACCTTG+TGG + chr8_3:48863153-48863172 Msa1292510:intron 40.0%
ACCTTGTGGTTTAAGCCTAA+TGG + chr8_3:48863167-48863186 Msa1292510:intron 40.0%
TCCATTAGGCTTAAACCACA+AGG - chr8_3:48863171-48863190 None:intergenic 40.0%
TTGTGGTTTAAGCCTAATGG+AGG + chr8_3:48863170-48863189 Msa1292510:intron 40.0%
GATGTGTGTTTGAGCAAGTT+TGG + chr8_3:48863260-48863279 Msa1292510:intron 40.0%
ATATGGCTGATTGCACCAAA+AGG - chr8_3:48863447-48863466 None:intergenic 40.0%
TTAGAAGTTTCTCTCTGTGG+CGG + chr8_3:48863602-48863621 Msa1292510:intron 40.0%
GTGGCGTAGAAAATTATCTG+TGG + chr8_3:48863673-48863692 Msa1292510:intron 40.0%
!! AACCCACTTTTGTGGTTTAG+GGG + chr8_3:48863719-48863738 Msa1292510:intron 40.0%
!! TTTGTGGTTTAGGGGTGTTA+AGG + chr8_3:48863727-48863746 Msa1292510:intron 40.0%
!! GAAATCCACTTTTGTGGCTT+AGG + chr8_3:48863763-48863782 Msa1292510:intron 40.0%
!! AATCCACTTTTGTGGCTTAG+GGG + chr8_3:48863765-48863784 Msa1292510:intron 40.0%
! AAAAGTGGATTTCAACGCCA+CGG - chr8_3:48863802-48863821 None:intergenic 40.0%
! GATAATTTTCTACGCCACAG+AGG - chr8_3:48863836-48863855 None:intergenic 40.0%
!! TTTGTGGTTTAGGGGTGTTA+AGG + chr8_3:48863727-48863746 Msa1292510:intron 40.0%
! AAAAGTGGATTTCTACGCCA+CGG - chr8_3:48863961-48863980 None:intergenic 40.0%
AGTAAATTTCTACGCCACGA+AGG - chr8_3:48864032-48864051 None:intergenic 40.0%
TATTTGCCTTTGTGGTGTAG+AGG + chr8_3:48864087-48864106 Msa1292510:intron 40.0%
CAAACATCATAGCACCACAA+AGG - chr8_3:48864117-48864136 None:intergenic 40.0%
!! TATGTTTCTGCTGCTGTTTC+TGG + chr8_3:48864330-48864349 Msa1292510:intron 40.0%
CTTGGACAATAAGCAACAGA+TGG - chr8_3:48864736-48864755 None:intergenic 40.0%
! CATCTGTTGCTTATTGTCCA+AGG + chr8_3:48864734-48864753 Msa1292510:intron 40.0%
! GGTCTAAGTTGTGGATTGAA+AGG - chr8_3:48864805-48864824 None:intergenic 40.0%
!! ACAGTGATTGGTCTAAGTTG+TGG - chr8_3:48864814-48864833 None:intergenic 40.0%
! GGTCTAAGTTGTGGATTGAA+AGG - chr8_3:48864805-48864824 None:intergenic 40.0%
AAAGAGCTTGTAACATGGGT+TGG - chr8_3:48864867-48864886 None:intergenic 40.0%
CATGGAAAGAGCTTGTAACA+TGG - chr8_3:48864872-48864891 None:intergenic 40.0%
!! TGCTCTTTTGGCTGAGTATA+AGG - chr8_3:48864909-48864928 None:intergenic 40.0%
TTTGGCTACACTGCATAATC+TGG - chr8_3:48865063-48865082 None:intergenic 40.0%
CTCTGGATTTCCTTTCACTT+TGG - chr8_3:48865081-48865100 None:intergenic 40.0%
TGAAAGGAAATCCAGAGCAA+TGG + chr8_3:48865084-48865103 Msa1292510:intron 40.0%
ATGTTTCGAAAACAGGCTCA+AGG - chr8_3:48865239-48865258 None:intergenic 40.0%
!! TGGTGGTGGGTATATTGTTA+CGG + chr8_3:48865504-48865523 Msa1292510:CDS 40.0%
AACATCCATAGTATGCTCAC+TGG - chr8_3:48865572-48865591 None:intergenic 40.0%
CTAGCTACAGAATCAAGCTA+AGG - chr8_3:48865678-48865697 None:intergenic 40.0%
CAGAAGAGAGTAGACTAGTG+AGG + chr8_3:48859831-48859850 Msa1292510:CDS 45.0%
CAATGCAAGACCTCATGATG+AGG + chr8_3:48859870-48859889 Msa1292510:CDS 45.0%
! CTCACTGCCATGTCATTTGT+GGG - chr8_3:48859920-48859939 None:intergenic 45.0%
CACAAATGACATGGCAGTGA+GGG + chr8_3:48859919-48859938 Msa1292510:CDS 45.0%
! AGGTAATTGGCTCACCAAGA+TGG - chr8_3:48859955-48859974 None:intergenic 45.0%
AGACAGGTTGCGGATGATTA+TGG + chr8_3:48860003-48860022 Msa1292510:CDS 45.0%
CAAATTCTCTCCTCGATGCA+AGG + chr8_3:48860152-48860171 Msa1292510:CDS 45.0%
AGATGATCCGGATGAAGATG+TGG + chr8_3:48860240-48860259 Msa1292510:CDS 45.0%
TCTGCATCCACATCTTCATC+CGG - chr8_3:48860250-48860269 None:intergenic 45.0%
TGAAGATGTGGATGCAGAGA+TGG + chr8_3:48860252-48860271 Msa1292510:CDS 45.0%
ATGTGGATGCAGAGATGGAT+TGG + chr8_3:48860257-48860276 Msa1292510:CDS 45.0%
!! GATGGATTGGACATTGAAGC+AGG + chr8_3:48860270-48860289 Msa1292510:CDS 45.0%
! AGCAAGCCTTTTTCCATCAC+GGG - chr8_3:48860362-48860381 None:intergenic 45.0%
!! ATGGAAAAAGGCTTGCTACC+TGG + chr8_3:48860365-48860384 Msa1292510:CDS 45.0%
TAACTGGAGCTACCAAGTTG+TGG + chr8_3:48860483-48860502 Msa1292510:CDS 45.0%
ATTAGGCATGCTCCACAACT+TGG - chr8_3:48860498-48860517 None:intergenic 45.0%
!! CATCCATCAGGGAAGTACTT+GGG + chr8_3:48860701-48860720 Msa1292510:CDS 45.0%
GAACGCTTCTATCAGTTCGA+AGG - chr8_3:48860889-48860908 None:intergenic 45.0%
!! AGAAGCGTTCTAGCACTAGA+AGG + chr8_3:48860899-48860918 Msa1292510:CDS 45.0%
GTCAGCCTGGCAAAATACTA+TGG - chr8_3:48860992-48861011 None:intergenic 45.0%
GTGGCTAACTGATATCCGTT+AGG - chr8_3:48861058-48861077 None:intergenic 45.0%
AACGGATATCAGTTAGCCAC+CGG + chr8_3:48861058-48861077 Msa1292510:CDS 45.0%
AGTCAAATTCGAGCCACATG+AGG + chr8_3:48861168-48861187 Msa1292510:CDS 45.0%
GTCAAATTCGAGCCACATGA+GGG + chr8_3:48861169-48861188 Msa1292510:CDS 45.0%
!!! GCCACATGAGGGTTACTTTT+TGG + chr8_3:48861180-48861199 Msa1292510:CDS 45.0%
! TGTTAACCTCAGGTTTGGTC+AGG + chr8_3:48861326-48861345 Msa1292510:intron 45.0%
AGTTCTGTGGATGTTCTTGG+AGG + chr8_3:48861398-48861417 Msa1292510:CDS 45.0%
AGATCAGAGGTGAGGTCAAA+TGG - chr8_3:48861532-48861551 None:intergenic 45.0%
TACAAGTGAAGGCAGATCAG+AGG - chr8_3:48861545-48861564 None:intergenic 45.0%
TACCTTCATGCCGTAGACTA+AGG + chr8_3:48861767-48861786 Msa1292510:intron 45.0%
ACCTTCATGCCGTAGACTAA+GGG + chr8_3:48861768-48861787 Msa1292510:intron 45.0%
ACATACAAATTGGGGGGACT+AGG + chr8_3:48861891-48861910 Msa1292510:intron 45.0%
GTTAAGTGGGCACAAGTCAT+TGG - chr8_3:48862487-48862506 None:intergenic 45.0%
AACCCTAGTTTCCTCACCAA+AGG + chr8_3:48862514-48862533 Msa1292510:intron 45.0%
CTCCTTTGGTGAGGAAACTA+GGG - chr8_3:48862519-48862538 None:intergenic 45.0%
CGGTGACATTATGTCACCAA+AGG + chr8_3:48862696-48862715 Msa1292510:intron 45.0%
GCGTTGAAAATCCACTTTCG+TGG + chr8_3:48863638-48863657 Msa1292510:intron 45.0%
! GATAATTTTCTACGCCACGG+AGG - chr8_3:48863671-48863690 None:intergenic 45.0%
!! AAAAGTGGGTTTTGACGCCA+CGG - chr8_3:48863710-48863729 None:intergenic 45.0%
CACCCCTAAACCACAAAAGT+GGG - chr8_3:48863724-48863743 None:intergenic 45.0%
ACACCCCTAAACCACAAAAG+TGG - chr8_3:48863725-48863744 None:intergenic 45.0%
! AAAAGTGGATTTCGACGCCA+CGG - chr8_3:48863756-48863775 None:intergenic 45.0%
!! TTTGTGGCTTAGGGGTGTTA+AGG + chr8_3:48863773-48863792 Msa1292510:intron 45.0%
!! GGCGTTGAAATCCACTTTTG+TGG + chr8_3:48863803-48863822 Msa1292510:intron 45.0%
! AAAAGTGGATTTCGACGCCA+CGG - chr8_3:48863756-48863775 None:intergenic 45.0%
ACACCCCTAAACCACAAAAG+TGG - chr8_3:48863725-48863744 None:intergenic 45.0%
!! GGCGTAGAAATCCACTTTTG+TGG + chr8_3:48863962-48863981 Msa1292510:intron 45.0%
! GATTGATTTAAACGCCACGG+AGG - chr8_3:48863995-48864014 None:intergenic 45.0%
ATAAATACTCCACGCCACGA+AGG - chr8_3:48864070-48864089 None:intergenic 45.0%
GGTAATCCTCTACACCACAA+AGG - chr8_3:48864096-48864115 None:intergenic 45.0%
GGTGTAGAGGATTACCTTTG+TGG + chr8_3:48864100-48864119 Msa1292510:intron 45.0%
!! ACATGGGTTGGTCTAAGTTG+TGG - chr8_3:48864855-48864874 None:intergenic 45.0%
TGCAGTGTAGCCAAAGTGAA+AGG + chr8_3:48865068-48865087 Msa1292510:intron 45.0%
ATGTGCCTGTTGTTGCGTTT+GGG + chr8_3:48865319-48865338 Msa1292510:intron 45.0%
GGTATGTATTCTGCAGATGG+TGG + chr8_3:48865487-48865506 Msa1292510:intron 45.0%
! ATGTATTCTGCAGATGGTGG+TGG + chr8_3:48865490-48865509 Msa1292510:intron 45.0%
! TGTATTCTGCAGATGGTGGT+GGG + chr8_3:48865491-48865510 Msa1292510:intron 45.0%
! ACAGCTTTATCGTGCGATCA+TGG - chr8_3:48865534-48865553 None:intergenic 45.0%
ATGATCGCACGATAAAGCTG+TGG + chr8_3:48865533-48865552 Msa1292510:CDS 45.0%
! TTGATTCTGTAGCTAGCCTG+TGG + chr8_3:48865682-48865701 Msa1292510:three_prime_UTR 45.0%
!! TAATTTCTTTATAATTTATA+AGG - chr8_3:48861435-48861454 None:intergenic 5.0%
!!! TTTATATATGTATATTTTAA+AGG + chr8_3:48862323-48862342 Msa1292510:intron 5.0%
!!! TTATATATGTATATTTTAAA+GGG + chr8_3:48862324-48862343 Msa1292510:intron 5.0%
!! ATTATTAAATTAAATATCAA+TGG + chr8_3:48862983-48863002 Msa1292510:intron 5.0%
AGAGTAGACTAGTGAGGGAG+CGG + chr8_3:48859837-48859856 Msa1292510:CDS 50.0%
TGCAAGACCTCATGATGAGG+AGG + chr8_3:48859873-48859892 Msa1292510:CDS 50.0%
! CCTCACTGCCATGTCATTTG+TGG - chr8_3:48859921-48859940 None:intergenic 50.0%
CCACAAATGACATGGCAGTG+AGG + chr8_3:48859918-48859937 Msa1292510:CDS 50.0%
CTCACCAAGATGGTGAAGAC+GGG - chr8_3:48859945-48859964 None:intergenic 50.0%
GCTCACCAAGATGGTGAAGA+CGG - chr8_3:48859946-48859965 None:intergenic 50.0%
CATCTCCCTCTCCCTAAAGA+AGG - chr8_3:48859975-48859994 None:intergenic 50.0%
! CTTCTTTAGGGAGAGGGAGA+TGG + chr8_3:48859973-48859992 Msa1292510:CDS 50.0%
GCGGATGATTATGGCAAAGC+TGG + chr8_3:48860012-48860031 Msa1292510:CDS 50.0%
ATGGCAAAGCTGGATGCTGA+TGG + chr8_3:48860022-48860041 Msa1292510:CDS 50.0%
TACTCCAAAAGACGAGGCTG+AGG + chr8_3:48860096-48860115 Msa1292510:CDS 50.0%
! TCATCCTCAGCCTCGTCTTT+TGG - chr8_3:48860103-48860122 None:intergenic 50.0%
CGGATCATCTCTTCTTCTCC+GGG - chr8_3:48860230-48860249 None:intergenic 50.0%
CCGGATCATCTCTTCTTCTC+CGG - chr8_3:48860231-48860250 None:intergenic 50.0%
CCGGAGAAGAAGAGATGATC+CGG + chr8_3:48860228-48860247 Msa1292510:CDS 50.0%
!! GGAGATGTTCGTCGACTTAC+TGG + chr8_3:48860325-48860344 Msa1292510:CDS 50.0%
! CGTTCTCCCGTGATGGAAAA+AGG + chr8_3:48860353-48860372 Msa1292510:CDS 50.0%
TGCAACATCAGTAGCACGCT+CGG - chr8_3:48860552-48860571 None:intergenic 50.0%
CTGACCGGACAGCAAACTAT+TGG + chr8_3:48860612-48860631 Msa1292510:CDS 50.0%
GCATTGCCTTCCATCCATCA+GGG + chr8_3:48860690-48860709 Msa1292510:CDS 50.0%
! GTACTTCCCTGATGGATGGA+AGG - chr8_3:48860699-48860718 None:intergenic 50.0%
CCAAGTACTTCCCTGATGGA+TGG - chr8_3:48860703-48860722 None:intergenic 50.0%
!! CCATCCATCAGGGAAGTACT+TGG + chr8_3:48860700-48860719 Msa1292510:CDS 50.0%
CTGCTAGCGATGACAAGACA+TGG + chr8_3:48860726-48860745 Msa1292510:CDS 50.0%
ATGGGACGTTGAAACAGGAG+AGG + chr8_3:48860754-48860773 Msa1292510:CDS 50.0%
GGATCGTTAGCAGCATCTTG+TGG + chr8_3:48860836-48860855 Msa1292510:CDS 50.0%
! AAGATGCTCTGGCTCGTGTA+TGG + chr8_3:48860861-48860880 Msa1292510:CDS 50.0%
! AGATGCTCTGGCTCGTGTAT+GGG + chr8_3:48860862-48860881 Msa1292510:CDS 50.0%
AGTGTTATCTTCACCACCGG+TGG - chr8_3:48861077-48861096 None:intergenic 50.0%
! CTTGTCGCATTTGGGACTTG+AGG + chr8_3:48861095-48861114 Msa1292510:CDS 50.0%
CTGTGGATGTTCTTGGAGGT+AGG + chr8_3:48861402-48861421 Msa1292510:intron 50.0%
!! TTTTCGGGGAAAACTTCCCC+TGG + chr8_3:48861691-48861710 Msa1292510:intron 50.0%
CCTTCATGCCGTAGACTAAG+GGG + chr8_3:48861769-48861788 Msa1292510:intron 50.0%
ATGCCGTAGACTAAGGGGTA+AGG + chr8_3:48861774-48861793 Msa1292510:intron 50.0%
GTGGAAAGCTCCATCAGTGT+TGG + chr8_3:48861820-48861839 Msa1292510:intron 50.0%
GGACTAGGCCAAACCCATTT+AGG + chr8_3:48861906-48861925 Msa1292510:intron 50.0%
CCTCCTTTGGTGAGGAAACT+AGG - chr8_3:48862520-48862539 None:intergenic 50.0%
CCTAGTTTCCTCACCAAAGG+AGG + chr8_3:48862517-48862536 Msa1292510:intron 50.0%
AGTTTCTCTCTGTGGCGGTA+AGG + chr8_3:48863607-48863626 Msa1292510:intron 50.0%
! GTGGATTTTCAACGCCACAG+AGG - chr8_3:48863633-48863652 None:intergenic 50.0%
!! GGCGTCAAAACCCACTTTTG+TGG + chr8_3:48863711-48863730 Msa1292510:intron 50.0%
!! GGCGTCGAAATCCACTTTTG+TGG + chr8_3:48863757-48863776 Msa1292510:intron 50.0%
ACACCCCTAAGCCACAAAAG+TGG - chr8_3:48863771-48863790 None:intergenic 50.0%
GAGGCCCTAAACCACAAAAG+TGG - chr8_3:48863817-48863836 None:intergenic 50.0%
! TTTGTGGTTTAGGGCCTCTG+TGG + chr8_3:48863819-48863838 Msa1292510:intron 50.0%
!! GGCGTCGAAATCCACTTTTG+TGG + chr8_3:48863757-48863776 Msa1292510:intron 50.0%
GATAATTTCCTACGCCACGG+AGG - chr8_3:48863920-48863939 None:intergenic 50.0%
GAGGCCCTAAACCACAAAAG+TGG - chr8_3:48863817-48863836 None:intergenic 50.0%
! TTTGTGGTTTAGGGCCTTCG+TGG + chr8_3:48864015-48864034 Msa1292510:intron 50.0%
! TGGTCACTGCAGTGCTCTTT+TGG - chr8_3:48864921-48864940 None:intergenic 50.0%
CAAACGCAACAACAGGCACA+TGG - chr8_3:48865320-48865339 None:intergenic 50.0%
CATGTGCCTGTTGTTGCGTT+TGG + chr8_3:48865318-48865337 Msa1292510:intron 50.0%
CAGTTCCCAAACGCAACAAC+AGG - chr8_3:48865327-48865346 None:intergenic 50.0%
ACGATAAAGCTGTGGTCCAG+CGG + chr8_3:48865541-48865560 Msa1292510:CDS 50.0%
ATGCTCACTGGTAAAACCGC+TGG - chr8_3:48865560-48865579 None:intergenic 50.0%
TGGAGAGACGAGACAGGTTG+CGG + chr8_3:48859993-48860012 Msa1292510:CDS 55.0%
CATTGCGTATCCAACGTGCC+CGG + chr8_3:48860209-48860228 Msa1292510:CDS 55.0%
TAGCAACTGCCTCTGCTGAC+CGG + chr8_3:48860597-48860616 Msa1292510:CDS 55.0%
TGGAAGGCAATGCGTGCAAG+AGG - chr8_3:48860683-48860702 None:intergenic 55.0%
CGCATTGCCTTCCATCCATC+AGG + chr8_3:48860689-48860708 Msa1292510:CDS 55.0%
GTGCCCAAGTACTTCCCTGA+TGG - chr8_3:48860707-48860726 None:intergenic 55.0%
GGATATCAGTTAGCCACCGG+TGG + chr8_3:48861061-48861080 Msa1292510:CDS 55.0%
GTGAGCGGGAATGGTGTACA+AGG - chr8_3:48861131-48861150 None:intergenic 55.0%
! AACCTCAGGTTTGGTCAGGC+CGG + chr8_3:48861330-48861349 Msa1292510:intron 55.0%
GTGAAGGCAGATCAGAGGTG+AGG - chr8_3:48861540-48861559 None:intergenic 55.0%
CCCCTTAGTCTACGGCATGA+AGG - chr8_3:48861772-48861791 None:intergenic 55.0%
GGGCACAAGTCATTGGGCTT+GGG - chr8_3:48862480-48862499 None:intergenic 55.0%
TGGGCACAAGTCATTGGGCT+TGG - chr8_3:48862481-48862500 None:intergenic 55.0%
AGAGGCTAGGGAACCTCCTT+TGG - chr8_3:48862715-48862734 None:intergenic 55.0%
GAGGCCCTAAACCACGAAAG+TGG - chr8_3:48863652-48863671 None:intergenic 55.0%
CTGTGGTATTAAGGCCTCCG+TGG + chr8_3:48863690-48863709 Msa1292510:intron 55.0%
! AGTGGATTTCAACGCCACGG+AGG - chr8_3:48863799-48863818 None:intergenic 55.0%
! TTGTGGTGTTAAGGCCTCCG+TGG + chr8_3:48863857-48863876 Msa1292510:intron 55.0%
!! TTAAGGTGTTGAGGCCTCCG+TGG + chr8_3:48863941-48863960 Msa1292510:intron 55.0%
! AGTGGATTTCTACGCCACGG+AGG - chr8_3:48863958-48863977 None:intergenic 55.0%
! TTTGTGGTTTAGGGCCTCCG+TGG + chr8_3:48863978-48863997 Msa1292510:intron 55.0%
TAATGGTGGTAGGGCCTTCG+TGG + chr8_3:48864053-48864072 Msa1292510:intron 55.0%
TAGACTAGTGAGGGAGCGGC+AGG + chr8_3:48859841-48859860 Msa1292510:CDS 60.0%
CAGCACGCCTCCTCATCATG+AGG - chr8_3:48859883-48859902 None:intergenic 60.0%
AGGGCCCGTCTTCACCATCT+TGG + chr8_3:48859938-48859957 Msa1292510:CDS 60.0%
GGGAGATGGAGAGACGAGAC+AGG + chr8_3:48859987-48860006 Msa1292510:CDS 60.0%
! GCTGGATGCTGATGGACAGC+TGG + chr8_3:48860030-48860049 Msa1292510:CDS 60.0%
CTCTTCTTCTCCGGGCACGT+TGG - chr8_3:48860222-48860241 None:intergenic 60.0%
GGTTGCTCGTTCTCCCGTGA+TGG + chr8_3:48860346-48860365 Msa1292510:CDS 60.0%
!! GTTTGCTGTCCGGTCAGCAG+AGG - chr8_3:48860609-48860628 None:intergenic 60.0%
! ACCTCAGGTTTGGTCAGGCC+GGG + chr8_3:48861331-48861350 Msa1292510:intron 60.0%
CTAGGGAGCCTCCTTTGGTG+AGG - chr8_3:48862528-48862547 None:intergenic 60.0%
CACCAAAGGAGGCTCCCTAG+CGG + chr8_3:48862528-48862547 Msa1292510:intron 60.0%
ATCCGCTAGGGAGCCTCCTT+TGG - chr8_3:48862533-48862552 None:intergenic 60.0%
! TTCGTGGTTTAGGGCCTCCG+TGG + chr8_3:48863654-48863673 Msa1292510:intron 60.0%
!! AGTGGGTTTTGACGCCACGG+AGG - chr8_3:48863707-48863726 None:intergenic 60.0%
!! TAGGGGTGTTAAGGCCTCCG+TGG + chr8_3:48863736-48863755 Msa1292510:intron 60.0%
! AGTGGATTTCGACGCCACGG+AGG - chr8_3:48863753-48863772 None:intergenic 60.0%
!! TAGGGGTGTTAAGGCCTCCG+TGG + chr8_3:48863736-48863755 Msa1292510:intron 60.0%
! AGTGGATTTCGACGCCACGG+AGG - chr8_3:48863753-48863772 None:intergenic 60.0%
!! TAGGGGTGTTAAGGCCTCCG+TGG + chr8_3:48863736-48863755 Msa1292510:intron 60.0%
TGTTAAGGCCTCCGTGGCGT+AGG + chr8_3:48863742-48863761 Msa1292510:intron 60.0%
!! ACGCTCGGTGTGCCCCTTGA+AGG - chr8_3:48860537-48860556 None:intergenic 65.0%
TCCCGGCCTGACCAAACCTG+AGG - chr8_3:48861335-48861354 None:intergenic 65.0%
CTGTGGCGGTAAGGCCTCTG+TGG + chr8_3:48863616-48863635 Msa1292510:intron 65.0%
GTGGTAGGGCCTTCGTGGCG+TGG + chr8_3:48864058-48864077 Msa1292510:intron 70.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 48859392 48865879 48859392 ID=Msa1292510;Name=Msa1292510
chr8_3 mRNA 48859392 48865879 48859392 ID=Msa1292510-mRNA-1;Parent=Msa1292510;Name=Msa1292510-mRNA-1;_AED=0.12;_eAED=0.12;_QI=43|1|1|1|0.8|0.66|6|282|474
chr8_3 exon 48859392 48859424 48859392 ID=Msa1292510-mRNA-1:exon:13503;Parent=Msa1292510-mRNA-1
chr8_3 exon 48859784 48860386 48859784 ID=Msa1292510-mRNA-1:exon:13504;Parent=Msa1292510-mRNA-1
chr8_3 exon 48860478 48860934 48860478 ID=Msa1292510-mRNA-1:exon:13505;Parent=Msa1292510-mRNA-1
chr8_3 exon 48861034 48861231 48861034 ID=Msa1292510-mRNA-1:exon:13506;Parent=Msa1292510-mRNA-1
chr8_3 exon 48861338 48861419 48861338 ID=Msa1292510-mRNA-1:exon:13507;Parent=Msa1292510-mRNA-1
chr8_3 exon 48865503 48865879 48865503 ID=Msa1292510-mRNA-1:exon:13508;Parent=Msa1292510-mRNA-1
chr8_3 five_prime_UTR 48859392 48859424 48859392 ID=Msa1292510-mRNA-1:five_prime_utr;Parent=Msa1292510-mRNA-1
chr8_3 five_prime_UTR 48859784 48859793 48859784 ID=Msa1292510-mRNA-1:five_prime_utr;Parent=Msa1292510-mRNA-1
chr8_3 CDS 48859794 48860386 48859794 ID=Msa1292510-mRNA-1:cds;Parent=Msa1292510-mRNA-1
chr8_3 CDS 48860478 48860934 48860478 ID=Msa1292510-mRNA-1:cds;Parent=Msa1292510-mRNA-1
chr8_3 CDS 48861034 48861231 48861034 ID=Msa1292510-mRNA-1:cds;Parent=Msa1292510-mRNA-1
chr8_3 CDS 48861338 48861419 48861338 ID=Msa1292510-mRNA-1:cds;Parent=Msa1292510-mRNA-1
chr8_3 CDS 48865503 48865597 48865503 ID=Msa1292510-mRNA-1:cds;Parent=Msa1292510-mRNA-1
chr8_3 three_prime_UTR 48865598 48865879 48865598 ID=Msa1292510-mRNA-1:three_prime_utr;Parent=Msa1292510-mRNA-1
Gene Sequence

>Msa1292510

ATGGAAGTTAATAAGGGTACCAGAGAGTATGAGATATCAGAAGAGAGTAGACTAGTGAGGGAGCGGCAGGAGAAAACAATGCAAGACCTCATGATGAGGAGGCGTGCTGCTGCTCTTGTTGTTCCCACAAATGACATGGCAGTGAGGGCCCGTCTTCACCATCTTGGTGAGCCAATTACCTTCTTTAGGGAGAGGGAGATGGAGAGACGAGACAGGTTGCGGATGATTATGGCAAAGCTGGATGCTGATGGACAGCTGGAAAAGCTAATTAAAGCTCTTGAGGATGAAGAGGCCGCAACTTCTACTCCAAAAGACGAGGCTGAGGATGATCTGCAGTATCCTTTTCACAATGAAGGCTCAAATTCTCTCCTCGATGCAAGGATTGATATTGCTAAATATTCTTTAGTAAGGGTTGCATTGCGTATCCAACGTGCCCGGAGAAGAAGAGATGATCCGGATGAAGATGTGGATGCAGAGATGGATTGGACATTGAAGCAGGAAACAAATTTGAATCTCGAATTTAGTGAAATCGGAGATGTTCGTCGACTTACTGGTTGCTCGTTCTCCCGTGATGGAAAAAGGCTTGCTACCTGTTCTCTAACTGGAGCTACCAAGTTGTGGAGCATGCCTAATGTAAAAAAAGTTTCTACCTTCAAGGGGCACACCGAGCGTGCTACTGATGTTGCATATTCTCCGGTGCACAATAATCATTTAGCAACTGCCTCTGCTGACCGGACAGCAAACTATTGGAATGATCGACGATCTCTTTTAAGAACATTTAAGGGTCATCGTGAACCTCTTGCACGCATTGCCTTCCATCCATCAGGGAAGTACTTGGGCACTGCTAGCGATGACAAGACATGGATGTTATGGGACGTTGAAACAGGAGAGGAGTTACTTCTTCAAGAAGGTCATAGTATAAGTGTATTTGGTTTGGCTTTTCATCATGATGGATCGTTAGCAGCATCTTGTGGAAAAGATGCTCTGGCTCGTGTATGGGACCTTCGAACTGATAGAAGCGTTCTAGCACTAGAAGGTCATGTCAAACCGATTCGTGGCATCAGTTTTTCTCCTAACGGATATCAGTTAGCCACCGGTGGTGAAGATAACACTTGTCGCATTTGGGACTTGAGGAAAAAGAAATCCTTGTACACCATTCCCGCTCACTCTAAATTAATATCACAAGTCAAATTCGAGCCACATGAGGGTTACTTTTTGGTAACTTCCTCATATGACATGACAACCAAGGTTTGGTCAGGCCGGGACTTTAAGCATGTGAAGAGACTATCAGGGCATGAAGATAGAGTTAGTTCTGTGGATGTTCTTGGAGATGGTGGTGGGTATATTGTTACGGTCTTCCATGATCGCACGATAAAGCTGTGGTCCAGCGGTTTTACCAGTGAGCATACTATGGATGTTGACTAA
Protein sequence

>Msa1292510

MEVNKGTREYEISEESRLVRERQEKTMQDLMMRRRAAALVVPTNDMAVRARLHHLGEPITFFREREMERRDRLRMIMAKLDADGQLEKLIKALEDEEAATSTPKDEAEDDLQYPFHNEGSNSLLDARIDIAKYSLVRVALRIQRARRRRDDPDEDVDAEMDWTLKQETNLNLEFSEIGDVRRLTGCSFSRDGKRLATCSLTGATKLWSMPNVKKVSTFKGHTERATDVAYSPVHNNHLATASADRTANYWNDRRSLLRTFKGHREPLARIAFHPSGKYLGTASDDKTWMLWDVETGEELLLQEGHSISVFGLAFHHDGSLAASCGKDALARVWDLRTDRSVLALEGHVKPIRGISFSPNGYQLATGGEDNTCRIWDLRKKKSLYTIPAHSKLISQVKFEPHEGYFLVTSSYDMTTKVWSGRDFKHVKRLSGHEDRVSSVDVLGDGGGYIVTVFHDRTIKLWSSGFTSEHTMDVD*