Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0700610 | XP_003629600.2 | 95.161 | 434 | 21 | 0 | 1 | 434 | 1 | 434 | 0.0 | 856 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0700610 | sp|Q9LIS1|CR26L_ARATH | 42.494 | 433 | 228 | 10 | 1 | 429 | 1 | 416 | 7.73e-106 | 322 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0700610 | A0A396GN49 | 95.161 | 434 | 21 | 0 | 1 | 434 | 1 | 434 | 0.0 | 856 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0617650 | Msa0700610 | 0.958737 | 1.120376e-116 | -8.615850e-47 |
| Msa0648180 | Msa0700610 | 0.820969 | 5.177867e-53 | -8.615850e-47 |
| Msa0648270 | Msa0700610 | 0.808010 | 3.820470e-50 | -8.615850e-47 |
| Msa0656950 | Msa0700610 | 0.986127 | 9.241980e-166 | -8.615850e-47 |
| Msa0700610 | Msa0700850 | 0.853461 | 2.353784e-61 | -8.615850e-47 |
| Msa0700610 | Msa0700910 | 0.808705 | 2.716052e-50 | -8.615850e-47 |
| Msa0700610 | Msa0723150 | 0.802913 | 4.476677e-49 | -8.615850e-47 |
| Msa0700610 | Msa1143380 | 0.960090 | 3.635452e-118 | -8.615850e-47 |
| Msa0700610 | Msa1178470 | 0.825284 | 5.099113e-54 | -8.615850e-47 |
| Msa0700610 | Msa1208510 | 0.800095 | 1.692413e-48 | -8.615850e-47 |
| Msa0700610 | Msa1214730 | 0.840171 | 1.021307e-57 | -8.615850e-47 |
| Msa0700610 | Msa1214870 | 0.838314 | 3.095581e-57 | -8.615850e-47 |
| Msa0700610 | Msa1258810 | 0.811801 | 5.838575e-51 | -8.615850e-47 |
| Msa0700610 | Msa1294730 | 0.819719 | 1.001770e-52 | -8.615850e-47 |
| Msa0700610 | Msa1300850 | 0.808386 | 3.177669e-50 | -8.615850e-47 |
| Msa0700610 | Msa1313460 | 0.804858 | 1.765013e-49 | -8.615850e-47 |
| Msa0700610 | Msa1330240 | 0.817976 | 2.493776e-52 | -8.615850e-47 |
| Msa0700610 | Msa1369860 | 0.807935 | 3.964113e-50 | -8.615850e-47 |
| Msa0700610 | Msa1417650 | 0.820117 | 8.123167e-53 | -8.615850e-47 |
| Msa0260960 | Msa0700610 | 0.807688 | 4.472984e-50 | -8.615850e-47 |
| Msa0511480 | Msa0700610 | 0.801146 | 1.033297e-48 | -8.615850e-47 |
| Msa0514280 | Msa0700610 | 0.807323 | 5.345524e-50 | -8.615850e-47 |
| Msa0524210 | Msa0700610 | 0.813869 | 2.057675e-51 | -8.615850e-47 |
| Msa0554420 | Msa0700610 | 0.809320 | 2.005552e-50 | -8.615850e-47 |
| Msa0558820 | Msa0700610 | 0.802786 | 4.755850e-49 | -8.615850e-47 |
| Msa0564150 | Msa0700610 | 0.936745 | 1.061252e-97 | -8.615850e-47 |
| Msa0601110 | Msa0700610 | 0.804345 | 2.258402e-49 | -8.615850e-47 |
| Msa0601120 | Msa0700610 | 0.803684 | 3.098985e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0700610 | MtrunA17_Chr8g0378151 | 95.161 | 434 | 21 | 0 | 1 | 434 | 1 | 434 | 0.0 | 856 |
| Msa0700610 | MtrunA17_Chr2g0298091 | 41.667 | 420 | 226 | 8 | 16 | 423 | 16 | 428 | 5.60e-100 | 305 |
| Msa0700610 | MtrunA17_Chr3g0132831 | 38.517 | 418 | 243 | 8 | 16 | 423 | 15 | 428 | 4.58e-95 | 293 |
| Msa0700610 | MtrunA17_Chr1g0163441 | 37.123 | 431 | 250 | 9 | 16 | 431 | 15 | 439 | 6.74e-90 | 279 |
| Msa0700610 | MtrunA17_Chr1g0148851 | 25.124 | 402 | 282 | 9 | 37 | 419 | 30 | 431 | 1.55e-28 | 116 |
| Msa0700610 | MtrunA17_Chr7g0274021 | 24.524 | 420 | 275 | 12 | 32 | 419 | 28 | 437 | 5.09e-28 | 115 |
| Msa0700610 | MtrunA17_Chr4g0001861 | 30.964 | 197 | 116 | 3 | 1 | 196 | 10 | 187 | 1.57e-17 | 84.3 |
| Msa0700610 | MtrunA17_Chr2g0334001 | 24.890 | 454 | 272 | 22 | 8 | 423 | 6 | 428 | 1.63e-16 | 81.3 |
| Msa0700610 | MtrunA17_Chr7g0224391 | 30.726 | 179 | 121 | 2 | 20 | 196 | 24 | 201 | 2.62e-15 | 77.4 |
| Msa0700610 | MtrunA17_Chr8g0386141 | 31.169 | 154 | 103 | 2 | 46 | 196 | 39 | 192 | 6.48e-15 | 76.3 |
| Msa0700610 | MtrunA17_Chr3g0087401 | 25.954 | 262 | 169 | 7 | 37 | 278 | 26 | 282 | 3.11e-14 | 74.3 |
| Msa0700610 | MtrunA17_Chr7g0273791 | 30.075 | 133 | 91 | 1 | 49 | 179 | 49 | 181 | 2.79e-13 | 71.6 |
| Msa0700610 | MtrunA17_Chr8g0371821 | 24.000 | 250 | 178 | 5 | 43 | 284 | 34 | 279 | 6.04e-13 | 70.1 |
| Msa0700610 | MtrunA17_Chr4g0004691 | 30.882 | 136 | 87 | 3 | 61 | 190 | 49 | 183 | 3.65e-12 | 65.1 |
| Msa0700610 | MtrunA17_Chr3g0132001 | 30.519 | 154 | 104 | 2 | 46 | 196 | 46 | 199 | 3.99e-12 | 67.8 |
| Msa0700610 | MtrunA17_Chr8g0376901 | 21.525 | 446 | 282 | 17 | 19 | 425 | 10 | 426 | 1.96e-11 | 65.5 |
| Msa0700610 | MtrunA17_Chr7g0273721 | 32.374 | 139 | 88 | 4 | 46 | 179 | 45 | 182 | 3.14e-11 | 65.1 |
| Msa0700610 | MtrunA17_Chr7g0273761 | 28.358 | 134 | 93 | 2 | 49 | 179 | 421 | 554 | 4.98e-11 | 65.1 |
| Msa0700610 | MtrunA17_Chr5g0433641 | 30.827 | 133 | 90 | 1 | 49 | 179 | 49 | 181 | 6.03e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0700610 | AT3G23840.1 | 42.494 | 433 | 228 | 10 | 1 | 429 | 1 | 416 | 7.86e-107 | 322 |
| Msa0700610 | AT4G13840.1 | 39.019 | 428 | 250 | 6 | 5 | 429 | 7 | 426 | 3.82e-105 | 318 |
| Msa0700610 | AT4G24510.1 | 34.499 | 429 | 250 | 11 | 10 | 423 | 4 | 416 | 2.96e-84 | 265 |
| Msa0700610 | AT2G19070.1 | 26.392 | 413 | 250 | 18 | 38 | 407 | 29 | 430 | 1.69e-18 | 87.8 |
| Msa0700610 | AT4G29250.1 | 24.550 | 444 | 261 | 18 | 19 | 419 | 27 | 439 | 2.00e-17 | 84.7 |
| Msa0700610 | AT5G48930.1 | 24.291 | 247 | 178 | 4 | 35 | 274 | 25 | 269 | 2.99e-14 | 74.7 |
| Msa0700610 | AT5G41040.1 | 33.962 | 159 | 99 | 3 | 46 | 201 | 65 | 220 | 3.62e-14 | 74.7 |
| Msa0700610 | AT5G41040.2 | 33.962 | 159 | 99 | 3 | 46 | 201 | 49 | 204 | 3.79e-14 | 74.3 |
| Msa0700610 | AT5G57840.1 | 22.384 | 411 | 290 | 10 | 35 | 420 | 25 | 431 | 1.12e-13 | 73.2 |
| Msa0700610 | AT5G63560.1 | 30.636 | 173 | 104 | 5 | 43 | 199 | 27 | 199 | 1.55e-13 | 72.4 |
| Msa0700610 | AT3G48720.1 | 30.323 | 155 | 104 | 3 | 46 | 196 | 41 | 195 | 2.80e-13 | 71.6 |
| Msa0700610 | AT1G65450.1 | 27.049 | 244 | 167 | 6 | 46 | 278 | 51 | 294 | 4.60e-12 | 68.2 |
Find 141 sgRNAs with CRISPR-Local
Find 439 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGTTAGTTGATTGTAAATT+TGG | 0.111021 | 4_4:+71740116 | Msa0700610:three_prime_UTR |
| ACAACTTGCAAGAACAAATT+TGG | 0.140491 | 4_4:+71739457 | Msa0700610:CDS |
| TGACACTAGTTTGAAAATTT+TGG | 0.151455 | 4_4:+71739677 | Msa0700610:CDS |
| GTCTCAACACCCCTTAATTT+TGG | 0.157335 | 4_4:+71739318 | Msa0700610:CDS |
| CCTTAGCTGGGCCCATGTTA+TGG | 0.166786 | 4_4:+71739203 | Msa0700610:CDS |
| AAACTTTATGTGCAATAATT+TGG | 0.180735 | 4_4:+71739511 | Msa0700610:CDS |
| CCTCATTAACGGTTTGTTTA+TGG | 0.186243 | 4_4:+71740141 | Msa0700610:three_prime_UTR |
| CTTAGCTGGGCCCATGTTAT+GGG | 0.193486 | 4_4:+71739204 | Msa0700610:CDS |
| CTTCAGATTTCATCAACTTA+TGG | 0.205690 | 4_4:+71739241 | Msa0700610:CDS |
| GGATTTCATTGGGCCTTAGC+TGG | 0.223582 | 4_4:+71739190 | Msa0700610:CDS |
| AAGCTTAATAACCACTAATA+TGG | 0.238110 | 4_4:+71732829 | Msa0700610:exon |
| GTTCTTGCAAGTTGTTCATT+AGG | 0.260077 | 4_4:-71739449 | None:intergenic |
| TGTTAGTTGATTGTAAATTT+GGG | 0.292985 | 4_4:+71740117 | Msa0700610:three_prime_UTR |
| TTCAGATTTCATCAACTTAT+GGG | 0.298539 | 4_4:+71739242 | Msa0700610:CDS |
| TGGTAGGGGCAATGATATAA+TGG | 0.301115 | 4_4:+71739602 | Msa0700610:CDS |
| TCATCCCTTGCGGCCGATTC+CGG | 0.304819 | 4_4:+71733077 | Msa0700610:CDS |
| TGATGAAAGAAATCAAATTA+TGG | 0.305939 | 4_4:+71739725 | Msa0700610:CDS |
| TTCTTGCAAGTTGTTCATTA+GGG | 0.331603 | 4_4:-71739448 | None:intergenic |
| AAGCCATTCATCTAGAGTTT+TGG | 0.331771 | 4_4:-71733170 | None:intergenic |
| CTCGTTTCTCAACAAGTCAT+TGG | 0.333685 | 4_4:+71733223 | Msa0700610:CDS |
| TGTGTATGACTTAAAATTAA+AGG | 0.335448 | 4_4:+71739830 | Msa0700610:CDS |
| TTTAAGATAGTGAAGTTTCA+TGG | 0.343891 | 4_4:-71732966 | None:intergenic |
| GGGAGATGAAGGTGTTGTTT+TGG | 0.345479 | 4_4:+71739893 | Msa0700610:CDS |
| TTCATCTTCTGGCAATATAA+TGG | 0.352304 | 4_4:-71739955 | None:intergenic |
| TTGACCCGGTTGGTGATCAT+TGG | 0.353117 | 4_4:+71739373 | Msa0700610:CDS |
| CAACTTGCAAGAACAAATTT+GGG | 0.358829 | 4_4:+71739458 | Msa0700610:CDS |
| TTAAAGAACCTGCAACAAAA+TGG | 0.359088 | 4_4:-71733269 | None:intergenic |
| CGATTCCGGCGATCGGAATC+TGG | 0.360082 | 4_4:+71733091 | Msa0700610:CDS |
| GAAGGAGAAAATGATAATTC+TGG | 0.360908 | 4_4:-71733247 | None:intergenic |
| TTGAGAAACGAGCAACTTGT+AGG | 0.365130 | 4_4:-71733212 | None:intergenic |
| AACTGTCACGGTTGTGGGTT+CGG | 0.365252 | 4_4:-71739562 | None:intergenic |
| GTTGGGCCAGGTCATGCCAC+TGG | 0.366990 | 4_4:+71732905 | Msa0700610:CDS |
| AAGTGTGGTGGGATTTCATT+GGG | 0.369203 | 4_4:+71739180 | Msa0700610:CDS |
| AGGAACCAGCTACATTTAAA+CGG | 0.370152 | 4_4:+71739349 | Msa0700610:CDS |
| TTGAAAGATACAAGAGGCTT+TGG | 0.372426 | 4_4:-71732784 | None:intergenic |
| TAAGTCAAGAAATGTCAAAT+TGG | 0.372854 | 4_4:-71739796 | None:intergenic |
| AGGGGTGTTGAGACGGATCT+TGG | 0.389004 | 4_4:-71739309 | None:intergenic |
| TTTGGTGCAATTGGCCTCAA+TGG | 0.403810 | 4_4:-71733152 | None:intergenic |
| TTTGTTTACTACACACTTCA+AGG | 0.403996 | 4_4:+71739867 | Msa0700610:CDS |
| AGTGTGTAGTAAACAAATCT+TGG | 0.405045 | 4_4:-71739861 | None:intergenic |
| ATATCATTGCCCCTACCATT+GGG | 0.408070 | 4_4:-71739597 | None:intergenic |
| TAAATTTGGGGCCTCATTAA+CGG | 0.408301 | 4_4:+71740130 | Msa0700610:three_prime_UTR |
| TTGTGGGAAAACCATATTAG+TGG | 0.409995 | 4_4:-71732840 | None:intergenic |
| AAGCTCTCTTTCTCTTCTTG+TGG | 0.410113 | 4_4:-71732857 | None:intergenic |
| AGATGAATGGCTTGCTATGA+TGG | 0.415307 | 4_4:+71733180 | Msa0700610:CDS |
| GTGTATGACTTAAAATTAAA+GGG | 0.419239 | 4_4:+71739831 | Msa0700610:CDS |
| GTTCGGATCCTTCTCGAACT+CGG | 0.421086 | 4_4:-71739545 | None:intergenic |
| TCGACAAACTGTCACGGTTG+TGG | 0.425168 | 4_4:-71739568 | None:intergenic |
| GATTTCATTGGGCCTTAGCT+GGG | 0.427691 | 4_4:+71739191 | Msa0700610:CDS |
| CAGATTCCGATCGCCGGAAT+CGG | 0.429202 | 4_4:-71733090 | None:intergenic |
| GGTTATTAAGCTTATAAGAA+AGG | 0.429802 | 4_4:-71732819 | None:intergenic |
| TATATCATTGCCCCTACCAT+TGG | 0.435218 | 4_4:-71739598 | None:intergenic |
| GGTAGGGGCAATGATATAAT+GGG | 0.436937 | 4_4:+71739603 | Msa0700610:CDS |
| TATATTGCCAGAAGATGAAA+TGG | 0.440744 | 4_4:+71739959 | Msa0700610:CDS |
| ATTGCACATAAAGTTTCAAA+TGG | 0.442525 | 4_4:-71739504 | None:intergenic |
| CACATAAAGTTTCAAATGGA+GGG | 0.442722 | 4_4:-71739500 | None:intergenic |
| AGCTCTCTTTCTCTTCTTGT+GGG | 0.443480 | 4_4:-71732856 | None:intergenic |
| CGACAAACTGTCACGGTTGT+GGG | 0.445047 | 4_4:-71739567 | None:intergenic |
| TCGTTTCTCAACAAGTCATT+GGG | 0.447263 | 4_4:+71733224 | Msa0700610:CDS |
| GGAACCAGCTACATTTAAAC+GGG | 0.448779 | 4_4:+71739350 | Msa0700610:CDS |
| CCTAAGGTGAATGATATTGA+TGG | 0.452041 | 4_4:+71739921 | Msa0700610:CDS |
| TTCGGATCCTTCTCGAACTC+GGG | 0.459230 | 4_4:-71739544 | None:intergenic |
| CCTCAACCTTGCATATCAAT+TGG | 0.459576 | 4_4:-71739632 | None:intergenic |
| TAAGTGTGGTGGGATTTCAT+TGG | 0.465833 | 4_4:+71739179 | Msa0700610:CDS |
| GCTAGCATGCTTGTGGATCA+AGG | 0.466138 | 4_4:+71739699 | Msa0700610:CDS |
| TTAGCTGGGCCCATGTTATG+GGG | 0.467497 | 4_4:+71739205 | Msa0700610:CDS |
| AAATCCGAGCTTAATGTGTA+TGG | 0.468103 | 4_4:+71739990 | Msa0700610:CDS |
| CTTCAAGGGGTGGGAGATGA+AGG | 0.469388 | 4_4:+71739882 | Msa0700610:CDS |
| CCATCAATATCATTCACCTT+AGG | 0.474137 | 4_4:-71739921 | None:intergenic |
| GGGATCCAATGATCACCAAC+CGG | 0.475921 | 4_4:-71739378 | None:intergenic |
| ATGGCCAGGTCCAAACCGTT+CGG | 0.477197 | 4_4:-71732947 | None:intergenic |
| GATAGTGAAGTTTCATGGCC+AGG | 0.479627 | 4_4:-71732961 | None:intergenic |
| GAAACTTCACTATCTTAAAG+TGG | 0.479693 | 4_4:+71732970 | Msa0700610:CDS |
| GACGGATCTTGGAATGTTGA+AGG | 0.485139 | 4_4:-71739298 | None:intergenic |
| AACAATTAAGAAAATAAAAG+AGG | 0.487357 | 4_4:+71733027 | Msa0700610:CDS |
| ATTTGAGAGTATCTTCAGTT+GGG | 0.488025 | 4_4:+71732888 | Msa0700610:CDS |
| GGAGGGGTTTGTTCAACACT+TGG | 0.494342 | 4_4:-71739483 | None:intergenic |
| TACATTTAAACGGGTTGACC+CGG | 0.497184 | 4_4:+71739359 | Msa0700610:CDS |
| CCATAACATGGGCCCAGCTA+AGG | 0.499246 | 4_4:-71739203 | None:intergenic |
| TTAACGGTTTGTTTATGGCA+TGG | 0.501658 | 4_4:+71740146 | Msa0700610:three_prime_UTR |
| TCAACCCGTTTAAATGTAGC+TGG | 0.502437 | 4_4:-71739354 | None:intergenic |
| AATGGCTTGCTATGATGGAT+TGG | 0.507896 | 4_4:+71733185 | Msa0700610:CDS |
| TTGCGGCCGATTCCGGCGAT+CGG | 0.508580 | 4_4:+71733084 | Msa0700610:CDS |
| GCACCAAAACTCTAGATGAA+TGG | 0.514485 | 4_4:+71733167 | Msa0700610:CDS |
| TTGATATGCAAGGTTGAGGC+AGG | 0.515574 | 4_4:+71739636 | Msa0700610:CDS |
| AGAGTATCTTCAGTTGGGCC+AGG | 0.515864 | 4_4:+71732893 | Msa0700610:CDS |
| TCGACCCGACCCCAATGGTA+GGG | 0.517340 | 4_4:+71739587 | Msa0700610:CDS |
| CAATCCGAACGGTTTGGACC+TGG | 0.517626 | 4_4:+71732943 | Msa0700610:CDS |
| ATTGCCCCTACCATTGGGGT+CGG | 0.519926 | 4_4:-71739592 | None:intergenic |
| TCCGACCCAGTGGCATGACC+TGG | 0.523816 | 4_4:-71732911 | None:intergenic |
| TTGCCCCTACCATTGGGGTC+GGG | 0.524581 | 4_4:-71739591 | None:intergenic |
| GCACATAAAGTTTCAAATGG+AGG | 0.536084 | 4_4:-71739501 | None:intergenic |
| GTCGACCAGATTCCGATCGC+CGG | 0.538465 | 4_4:-71733096 | None:intergenic |
| TACTACACACTTCAAGGGGT+GGG | 0.539191 | 4_4:+71739873 | Msa0700610:CDS |
| GATCGCCGGAATCGGCCGCA+AGG | 0.546043 | 4_4:-71733082 | None:intergenic |
| TTGTTTACTACACACTTCAA+GGG | 0.547045 | 4_4:+71739868 | Msa0700610:CDS |
| TAACTCAATTTAAGTGTGGT+GGG | 0.547840 | 4_4:+71739169 | Msa0700610:CDS |
| TTGGGCCAGGTCATGCCACT+GGG | 0.547919 | 4_4:+71732906 | Msa0700610:CDS |
| GTGTATGGTATCATGTTTGA+GGG | 0.549776 | 4_4:+71740005 | Msa0700610:CDS |
| CCATAAACAAACCGTTAATG+AGG | 0.550225 | 4_4:-71740141 | None:intergenic |
| ATCGCCGGAATCGGCCGCAA+GGG | 0.554171 | 4_4:-71733081 | None:intergenic |
| CGACCCGACCCCAATGGTAG+GGG | 0.554339 | 4_4:+71739588 | Msa0700610:CDS |
| GATTTGAGAGTATCTTCAGT+TGG | 0.555245 | 4_4:+71732887 | Msa0700610:CDS |
| ACATAAAGTTTCAAATGGAG+GGG | 0.558070 | 4_4:-71739499 | None:intergenic |
| GCCAGGTCATGCCACTGGGT+CGG | 0.558921 | 4_4:+71732910 | Msa0700610:CDS |
| GTTAGTTGATTGTAAATTTG+GGG | 0.560723 | 4_4:+71740118 | Msa0700610:three_prime_UTR |
| GTAACTCAATTTAAGTGTGG+TGG | 0.561280 | 4_4:+71739168 | Msa0700610:CDS |
| TGTGTATGGTATCATGTTTG+AGG | 0.561998 | 4_4:+71740004 | Msa0700610:CDS |
| AAAATTAAGGGGTGTTGAGA+CGG | 0.562724 | 4_4:-71739316 | None:intergenic |
| TTTGACTCTGAGGCCGCACA+AGG | 0.563433 | 4_4:+71733001 | Msa0700610:CDS |
| GATTATTATTTCATCCCTTG+CGG | 0.564108 | 4_4:+71733067 | Msa0700610:CDS |
| CTTAATTGTTAGGCCTTGTG+CGG | 0.564584 | 4_4:-71733014 | None:intergenic |
| TAGCTGGGCCCATGTTATGG+GGG | 0.565629 | 4_4:+71739206 | Msa0700610:CDS |
| GTCGACCCGACCCCAATGGT+AGG | 0.572588 | 4_4:+71739586 | Msa0700610:CDS |
| CCAATTGATATGCAAGGTTG+AGG | 0.574004 | 4_4:+71739632 | Msa0700610:CDS |
| TCAGATTTCATCAACTTATG+GGG | 0.579204 | 4_4:+71739243 | Msa0700610:CDS |
| CAGGTAACTCAATTTAAGTG+TGG | 0.580586 | 4_4:+71739165 | Msa0700610:intron |
| TCATTAGGGAGCTAGTTATG+TGG | 0.584575 | 4_4:-71739434 | None:intergenic |
| ATGAAATCTGAAGCTGAATG+TGG | 0.593595 | 4_4:-71739231 | None:intergenic |
| TTTAAACGGGTTGACCCGGT+TGG | 0.594712 | 4_4:+71739363 | Msa0700610:CDS |
| AGAACCTGCAACAAAATGGA+AGG | 0.600774 | 4_4:-71733265 | None:intergenic |
| GGATCCAATGATCACCAACC+GGG | 0.601111 | 4_4:-71739377 | None:intergenic |
| TTCGTCAAGTGCAATGATTG+TGG | 0.601190 | 4_4:+71733121 | Msa0700610:CDS |
| CAATCATTGCACTTGACGAA+GGG | 0.602139 | 4_4:-71733118 | None:intergenic |
| TTACTACACACTTCAAGGGG+TGG | 0.606615 | 4_4:+71739872 | Msa0700610:CDS |
| GGTTTACTTCTTTGACTCTG+AGG | 0.609658 | 4_4:+71732991 | Msa0700610:CDS |
| ACGGATCTTGGAATGTTGAA+GGG | 0.614481 | 4_4:-71739297 | None:intergenic |
| ACAATCATTGCACTTGACGA+AGG | 0.615639 | 4_4:-71733119 | None:intergenic |
| TGTTTACTACACACTTCAAG+GGG | 0.616578 | 4_4:+71739869 | Msa0700610:CDS |
| TAGGGAGCTAGTTATGTGGA+AGG | 0.620633 | 4_4:-71739430 | None:intergenic |
| GTTTGTCGACCCGACCCCAA+TGG | 0.621503 | 4_4:+71739582 | Msa0700610:CDS |
| TGCATAGCCCGAGTTCGAGA+AGG | 0.625715 | 4_4:+71739537 | Msa0700610:CDS |
| TATCATTGCCCCTACCATTG+GGG | 0.626014 | 4_4:-71739596 | None:intergenic |
| GATACCATACACATTAAGCT+CGG | 0.633143 | 4_4:-71739994 | None:intergenic |
| GAAACGAGCAACTTGTAGGA+AGG | 0.635824 | 4_4:-71733208 | None:intergenic |
| GTCGGGTCGACAAACTGTCA+CGG | 0.641477 | 4_4:-71739574 | None:intergenic |
| AAATGACCAATTGATATGCA+AGG | 0.646231 | 4_4:+71739626 | Msa0700610:CDS |
| TTGTGGAGCAAGAACCATTG+AGG | 0.669130 | 4_4:+71733138 | Msa0700610:CDS |
| AACTTGCAAGAACAAATTTG+GGG | 0.669322 | 4_4:+71739459 | Msa0700610:CDS |
| TGAAATCTGAAGCTGAATGT+GGG | 0.702970 | 4_4:-71739230 | None:intergenic |
| AATTTGTTGAAAGATACAAG+AGG | 0.703489 | 4_4:-71732790 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATTAAATAATTTTTTTA+AGG | + | chr4_4:71734754-71734773 | Msa0700610:intron | 0.0% |
| !!! | TAATAATTATTATTTTTTTA+AGG | - | chr4_4:71737631-71737650 | None:intergenic | 0.0% |
| !! | TATCATTAAATATTTGATTA+AGG | - | chr4_4:71733324-71733343 | None:intergenic | 10.0% |
| !! | TATTAATTATTAGAGTTTAA+TGG | + | chr4_4:71733537-71733556 | Msa0700610:intron | 10.0% |
| !! | ATTAAAAATATTAATTGATG+TGG | + | chr4_4:71733627-71733646 | Msa0700610:intron | 10.0% |
| !!! | TCAAGAATAATATTTTTTTT+GGG | - | chr4_4:71734264-71734283 | None:intergenic | 10.0% |
| !!! | TTCAAGAATAATATTTTTTT+TGG | - | chr4_4:71734265-71734284 | None:intergenic | 10.0% |
| !!! | ATAATTTTTATTGTTGAAAA+AGG | - | chr4_4:71734461-71734480 | None:intergenic | 10.0% |
| !!! | AAAATTTTACAAAAAAAAAG+TGG | - | chr4_4:71734720-71734739 | None:intergenic | 10.0% |
| !! | ACCTAAAAAATTATAATTTA+TGG | + | chr4_4:71734782-71734801 | Msa0700610:intron | 10.0% |
| !! | CCTAAAAAATTATAATTTAT+GGG | + | chr4_4:71734783-71734802 | Msa0700610:intron | 10.0% |
| !! | AAACAAACATATTAAATTTA+AGG | - | chr4_4:71734828-71734847 | None:intergenic | 10.0% |
| !!! | CTCAAATTAAATTTTTAATT+TGG | + | chr4_4:71735027-71735046 | Msa0700610:intron | 10.0% |
| !!! | AATTAAATTTTTAATTTGGA+AGG | + | chr4_4:71735031-71735050 | Msa0700610:intron | 10.0% |
| !!! | TTTTTATTTTTATTTTACAG+AGG | - | chr4_4:71735068-71735087 | None:intergenic | 10.0% |
| !!! | TAAATATTTTTTACAAATTC+AGG | + | chr4_4:71735193-71735212 | Msa0700610:intron | 10.0% |
| !!! | AAATATTTTTTACAAATTCA+GGG | + | chr4_4:71735194-71735213 | Msa0700610:intron | 10.0% |
| !!! | AATCTATATTTTTTATTGAT+AGG | + | chr4_4:71735250-71735269 | Msa0700610:intron | 10.0% |
| !! | ATAAAAAGTAAATCATTTAT+TGG | + | chr4_4:71735499-71735518 | Msa0700610:intron | 10.0% |
| !!! | ATTTGATATGAAATTTTTTT+AGG | - | chr4_4:71736135-71736154 | None:intergenic | 10.0% |
| !!! | ATTATTTTGAGAAAAAAAAA+TGG | + | chr4_4:71736944-71736963 | Msa0700610:intron | 10.0% |
| !!! | ACTTTTTAAAAGTTAAAAAA+TGG | + | chr4_4:71737101-71737120 | Msa0700610:intron | 10.0% |
| !! | TAATAAAAACTTACTATTAA+AGG | - | chr4_4:71737251-71737270 | None:intergenic | 10.0% |
| !!! | TATTTATATTTTCAAAATGT+TGG | + | chr4_4:71737492-71737511 | Msa0700610:intron | 10.0% |
| !! | AAAATGAAGAAAATAAAAAA+TGG | + | chr4_4:71737523-71737542 | Msa0700610:intron | 10.0% |
| !!! | TTAAATGTTTTAATTTTTTC+AGG | + | chr4_4:71737759-71737778 | Msa0700610:intron | 10.0% |
| !!! | TTAAACATATTTTTTTTTGA+AGG | + | chr4_4:71738075-71738094 | Msa0700610:intron | 10.0% |
| !! | AAAATATTAAACATATTTAG+AGG | + | chr4_4:71738098-71738117 | Msa0700610:intron | 10.0% |
| !! | AAATATTAAACATATTTAGA+GGG | + | chr4_4:71738099-71738118 | Msa0700610:intron | 10.0% |
| !!! | TTTTTACTTAAATTTTGTTA+AGG | - | chr4_4:71738502-71738521 | None:intergenic | 10.0% |
| !!! | CTTTTATTTTCTTAATTGTT+AGG | - | chr4_4:71733027-71733046 | None:intergenic | 15.0% |
| !! | AACAATTAAGAAAATAAAAG+AGG | + | chr4_4:71733027-71733046 | Msa0700610:CDS | 15.0% |
| !!! | GTAATTTTAAATGTTTTGAT+TGG | + | chr4_4:71733649-71733668 | Msa0700610:intron | 15.0% |
| !!! | CATATTTTAAGCTAAAATAT+TGG | - | chr4_4:71733886-71733905 | None:intergenic | 15.0% |
| !!! | CAATATTTTAGCTTAAAATA+TGG | + | chr4_4:71733884-71733903 | Msa0700610:intron | 15.0% |
| !! | AAAAAATATTATTCTTGAAG+TGG | + | chr4_4:71734266-71734285 | Msa0700610:intron | 15.0% |
| !! | TAGCTCAATATTTATTATTT+GGG | - | chr4_4:71734317-71734336 | None:intergenic | 15.0% |
| !!! | TTTTGCAACTAAATTTATTT+GGG | - | chr4_4:71734341-71734360 | None:intergenic | 15.0% |
| !!! | TTTTTGCAACTAAATTTATT+TGG | - | chr4_4:71734342-71734361 | None:intergenic | 15.0% |
| !!! | CTTTTCAAATGTAAATAAAT+AGG | - | chr4_4:71734536-71734555 | None:intergenic | 15.0% |
| !! | AATCTCTAACAAAAAAATTA+AGG | - | chr4_4:71734681-71734700 | None:intergenic | 15.0% |
| !!! | CCCATAAATTATAATTTTTT+AGG | - | chr4_4:71734786-71734805 | None:intergenic | 15.0% |
| !! | AAAAAAATCTTCTTTATAGT+TGG | + | chr4_4:71734850-71734869 | Msa0700610:intron | 15.0% |
| !!! | CAATACATTGATTTTTTTTT+TGG | - | chr4_4:71735730-71735749 | None:intergenic | 15.0% |
| !! | AGAATTCTTAAAAATTGTTT+CGG | + | chr4_4:71735793-71735812 | Msa0700610:intron | 15.0% |
| !!! | GTTGAATTGAATTTTAAATT+AGG | - | chr4_4:71735906-71735925 | None:intergenic | 15.0% |
| !! | AACACTTTAATTAATATGAA+TGG | + | chr4_4:71736284-71736303 | Msa0700610:intron | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | - | chr4_4:71736568-71736587 | None:intergenic | 15.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | + | chr4_4:71736567-71736586 | Msa0700610:intron | 15.0% |
| !!! | AATAAATAAGGGTATAATAA+TGG | + | chr4_4:71736881-71736900 | Msa0700610:intron | 15.0% |
| !! | AGTGATTAATTTCTAAATTT+AGG | - | chr4_4:71737331-71737350 | None:intergenic | 15.0% |
| !! | TTAATAAAACTTACTATTAC+AGG | + | chr4_4:71737397-71737416 | Msa0700610:intron | 15.0% |
| !!! | TTTGTTATAATTGAATTAGA+TGG | + | chr4_4:71738323-71738342 | Msa0700610:intron | 15.0% |
| !!! | TTTTAACCAAAATTCACTTT+TGG | - | chr4_4:71733745-71733764 | None:intergenic | 20.0% |
| !!! | TATTTTAGCTTAAAATATGG+AGG | + | chr4_4:71733887-71733906 | Msa0700610:intron | 20.0% |
| !!! | ATTTTAGCTTAAAATATGGA+GGG | + | chr4_4:71733888-71733907 | Msa0700610:intron | 20.0% |
| !!! | ATTTGAAAATCTGATAGTTT+TGG | - | chr4_4:71733915-71733934 | None:intergenic | 20.0% |
| !! | AGCTCAATATTTATTATTTG+GGG | - | chr4_4:71734316-71734335 | None:intergenic | 20.0% |
| !! | GTAGCTCAATATTTATTATT+TGG | - | chr4_4:71734318-71734337 | None:intergenic | 20.0% |
| !! | TTTGCAACTAAATTTATTTG+GGG | - | chr4_4:71734340-71734359 | None:intergenic | 20.0% |
| !!! | TTGTATTAGTTTGATACTTT+CGG | + | chr4_4:71734412-71734431 | Msa0700610:intron | 20.0% |
| !! | ATAGTCATAGACAAATTAAA+TGG | + | chr4_4:71734488-71734507 | Msa0700610:intron | 20.0% |
| !! | AGACAATTATTGATGAAATT+GGG | + | chr4_4:71734579-71734598 | Msa0700610:intron | 20.0% |
| !! | GACTAAAATTAACAAATCTT+AGG | - | chr4_4:71734659-71734678 | None:intergenic | 20.0% |
| !! | CTGAAAATAGTTTATGTAAA+TGG | - | chr4_4:71735133-71735152 | None:intergenic | 20.0% |
| !!! | TTTTTTGGTTACATTAAAGA+GGG | - | chr4_4:71735715-71735734 | None:intergenic | 20.0% |
| !!! | TTTTTTTGGTTACATTAAAG+AGG | - | chr4_4:71735716-71735735 | None:intergenic | 20.0% |
| !!! | CACTTTTAAACTCTAAATTT+TGG | - | chr4_4:71735968-71735987 | None:intergenic | 20.0% |
| !! | ATATCATCAAAATATATGCA+AGG | - | chr4_4:71736049-71736068 | None:intergenic | 20.0% |
| !! | AAAATTCCATAACTACAATT+AGG | - | chr4_4:71736073-71736092 | None:intergenic | 20.0% |
| !!! | TTGTAGTTATGGAATTTTAT+TGG | + | chr4_4:71736075-71736094 | Msa0700610:intron | 20.0% |
| !! | AATGATTAAAAGAAAGAGAA+TGG | + | chr4_4:71736534-71736553 | Msa0700610:intron | 20.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | - | chr4_4:71736577-71736596 | None:intergenic | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | + | chr4_4:71736654-71736673 | Msa0700610:intron | 20.0% |
| !!! | ATTAATTGTGTTGATTTTGA+TGG | + | chr4_4:71736786-71736805 | Msa0700610:intron | 20.0% |
| !! | TGGATGAAATTCAATAAATA+AGG | + | chr4_4:71736869-71736888 | Msa0700610:intron | 20.0% |
| !! | GGATGAAATTCAATAAATAA+GGG | + | chr4_4:71736870-71736889 | Msa0700610:intron | 20.0% |
| !! | AAAAATAATAAATGTTGCGT+TGG | + | chr4_4:71736906-71736925 | Msa0700610:intron | 20.0% |
| !! | ATTTAAACCTTGATAAATGT+GGG | - | chr4_4:71737581-71737600 | None:intergenic | 20.0% |
| !! | AATTTAAACCTTGATAAATG+TGG | - | chr4_4:71737582-71737601 | None:intergenic | 20.0% |
| !!! | GCATCTCAATTTTTTTTAAA+AGG | - | chr4_4:71737670-71737689 | None:intergenic | 20.0% |
| !! | TTGAAACTAGAAGAAAATTA+TGG | - | chr4_4:71737847-71737866 | None:intergenic | 20.0% |
| !!! | TACTTAAATTTTGTTAAGGA+GGG | - | chr4_4:71738498-71738517 | None:intergenic | 20.0% |
| !!! | TTACTTAAATTTTGTTAAGG+AGG | - | chr4_4:71738499-71738518 | None:intergenic | 20.0% |
| !! | ATACAAAAACTGTATTGTAT+TGG | + | chr4_4:71738950-71738969 | Msa0700610:intron | 20.0% |
| !!! | TTGAGTACTTATATTCTTTT+AGG | + | chr4_4:71738983-71739002 | Msa0700610:intron | 20.0% |
| !! | AAACTTTATGTGCAATAATT+TGG | + | chr4_4:71739511-71739530 | Msa0700610:CDS | 20.0% |
| !! | TGATGAAAGAAATCAAATTA+TGG | + | chr4_4:71739725-71739744 | Msa0700610:CDS | 20.0% |
| !! | ATATAGTAGAAAAAGATCAA+GGG | + | chr4_4:71739748-71739767 | Msa0700610:CDS | 20.0% |
| !! | TGTGTATGACTTAAAATTAA+AGG | + | chr4_4:71739830-71739849 | Msa0700610:CDS | 20.0% |
| !! | GTGTATGACTTAAAATTAAA+GGG | + | chr4_4:71739831-71739850 | Msa0700610:CDS | 20.0% |
| !! | ATGTTAGTTGATTGTAAATT+TGG | + | chr4_4:71740116-71740135 | Msa0700610:three_prime_UTR | 20.0% |
| !! | TGTTAGTTGATTGTAAATTT+GGG | + | chr4_4:71740117-71740136 | Msa0700610:three_prime_UTR | 20.0% |
| !!! | AATTTGTTGAAAGATACAAG+AGG | - | chr4_4:71732793-71732812 | None:intergenic | 25.0% |
| ! | GGTTATTAAGCTTATAAGAA+AGG | - | chr4_4:71732822-71732841 | None:intergenic | 25.0% |
| ! | AAGCTTAATAACCACTAATA+TGG | + | chr4_4:71732829-71732848 | Msa0700610:exon | 25.0% |
| !! | TTTAAGATAGTGAAGTTTCA+TGG | - | chr4_4:71732969-71732988 | None:intergenic | 25.0% |
| ! | ATAATTAATATCACTCCCTA+AGG | - | chr4_4:71733527-71733546 | None:intergenic | 25.0% |
| ! | TTATTAGAGTTTAATGGTAG+TGG | + | chr4_4:71733543-71733562 | Msa0700610:intron | 25.0% |
| ! | TATTAGAGTTTAATGGTAGT+GGG | + | chr4_4:71733544-71733563 | Msa0700610:intron | 25.0% |
| ! | GCGTAATAATAAGAGTTTAA+TGG | - | chr4_4:71733713-71733732 | None:intergenic | 25.0% |
| !!! | ATGTTACCATTTTGTTGATT+TGG | - | chr4_4:71733945-71733964 | None:intergenic | 25.0% |
| ! | AATCAACAAAATGGTAACAT+TGG | + | chr4_4:71733945-71733964 | Msa0700610:intron | 25.0% |
| !!! | AGGTTTACACAATGTTTTTT+TGG | - | chr4_4:71734144-71734163 | None:intergenic | 25.0% |
| ! | AATATTATTCTTGAAGTGGT+CGG | + | chr4_4:71734270-71734289 | Msa0700610:intron | 25.0% |
| !! | TATTTATTATTTGGGGTAAC+CGG | - | chr4_4:71734309-71734328 | None:intergenic | 25.0% |
| ! | CAGACAATTATTGATGAAAT+TGG | + | chr4_4:71734578-71734597 | Msa0700610:intron | 25.0% |
| ! | TAATGAATTCAAAGTTACAG+AGG | - | chr4_4:71735102-71735121 | None:intergenic | 25.0% |
| !!! | AGACATTTTAACACTTTACA+AGG | + | chr4_4:71735151-71735170 | Msa0700610:intron | 25.0% |
| !! | ATAAATGAGATTGATTTCGA+CGG | + | chr4_4:71735339-71735358 | Msa0700610:intron | 25.0% |
| !!! | AATGGATTGGGAAAATAATT+GGG | - | chr4_4:71735548-71735567 | None:intergenic | 25.0% |
| !!! | AAATGGATTGGGAAAATAAT+TGG | - | chr4_4:71735549-71735568 | None:intergenic | 25.0% |
| !! | CATAAAAAGTGAAATGGATT+GGG | - | chr4_4:71735560-71735579 | None:intergenic | 25.0% |
| ! | TAAAGTTCTTAAAAGATGTC+TGG | - | chr4_4:71735635-71735654 | None:intergenic | 25.0% |
| !!! | TTTTTGGTTACATTAAAGAG+GGG | - | chr4_4:71735714-71735733 | None:intergenic | 25.0% |
| ! | TGAATGTAGTAGTACTATAA+TGG | - | chr4_4:71735860-71735879 | None:intergenic | 25.0% |
| !!! | AACAGTTAATTTGTTGAACT+TGG | + | chr4_4:71735923-71735942 | Msa0700610:intron | 25.0% |
| !!! | ACGATATTCCTTTTTTTTTG+TGG | + | chr4_4:71736001-71736020 | Msa0700610:intron | 25.0% |
| !!! | ATATTCCTTTTTTTTTGTGG+TGG | + | chr4_4:71736004-71736023 | Msa0700610:intron | 25.0% |
| ! | ATCAAAATATATGCAAGGTT+CGG | - | chr4_4:71736044-71736063 | None:intergenic | 25.0% |
| ! | GATATTCCTAATTGTAGTTA+TGG | + | chr4_4:71736064-71736083 | Msa0700610:intron | 25.0% |
| ! | GGGAACTATTAATAAGAAAT+TGG | - | chr4_4:71736217-71736236 | None:intergenic | 25.0% |
| ! | TGAACTTACTTAATTGGATA+GGG | - | chr4_4:71736239-71736258 | None:intergenic | 25.0% |
| ! | ATTCTATGATGACAAATTGT+TGG | - | chr4_4:71736354-71736373 | None:intergenic | 25.0% |
| ! | AATAGTCTCACCAAATTAAA+TGG | + | chr4_4:71736376-71736395 | Msa0700610:intron | 25.0% |
| !!! | AAACGACACTCATTTTAAAA+CGG | - | chr4_4:71736485-71736504 | None:intergenic | 25.0% |
| !!! | TTTAAAATGAGTGTCGTTTT+AGG | + | chr4_4:71736486-71736505 | Msa0700610:intron | 25.0% |
| ! | TCCTTATTAATTGTAGTTAG+TGG | + | chr4_4:71736835-71736854 | Msa0700610:intron | 25.0% |
| ! | TCCACTAACTACAATTAATA+AGG | - | chr4_4:71736839-71736858 | None:intergenic | 25.0% |
| ! | AAGAGACAATTATTATGAGA+CGG | + | chr4_4:71736969-71736988 | Msa0700610:intron | 25.0% |
| !!! | AAAATACTAAGAGTGTCTTT+AGG | + | chr4_4:71737014-71737033 | Msa0700610:intron | 25.0% |
| !!! | AAATACTAAGAGTGTCTTTA+GGG | + | chr4_4:71737015-71737034 | Msa0700610:intron | 25.0% |
| ! | AAAAATGTGGTATTGTGAAA+TGG | + | chr4_4:71737060-71737079 | Msa0700610:intron | 25.0% |
| ! | TGTGAAATGGTTAAAAATGA+TGG | + | chr4_4:71737073-71737092 | Msa0700610:intron | 25.0% |
| !! | CAATACCCTTTTAAACTAAA+GGG | + | chr4_4:71737188-71737207 | Msa0700610:intron | 25.0% |
| !! | CATTTCCCTTTAGTTTAAAA+GGG | - | chr4_4:71737196-71737215 | None:intergenic | 25.0% |
| !! | ACATTTCCCTTTAGTTTAAA+AGG | - | chr4_4:71737197-71737216 | None:intergenic | 25.0% |
| ! | AAATGTTAACGAGTATCTTT+GGG | + | chr4_4:71737211-71737230 | Msa0700610:intron | 25.0% |
| ! | TTGAAAACACTCATTAACAA+AGG | - | chr4_4:71737293-71737312 | None:intergenic | 25.0% |
| ! | AATGTTAACAAGTTCTTTCT+GGG | - | chr4_4:71737436-71737455 | None:intergenic | 25.0% |
| ! | AAATGTTAACAAGTTCTTTC+TGG | - | chr4_4:71737437-71737456 | None:intergenic | 25.0% |
| ! | TACAATAATGTGATACTTGA+TGG | - | chr4_4:71737474-71737493 | None:intergenic | 25.0% |
| ! | GAAGAAAATAAAAAATGGAG+AGG | + | chr4_4:71737528-71737547 | Msa0700610:intron | 25.0% |
| !!! | ATTATGGCAGTTTTTAAAAC+AGG | - | chr4_4:71737831-71737850 | None:intergenic | 25.0% |
| ! | AACTAGGAACAAAATATTGT+CGG | + | chr4_4:71737884-71737903 | Msa0700610:intron | 25.0% |
| ! | AGCAAAATTTCAACAAAGTT+TGG | - | chr4_4:71737953-71737972 | None:intergenic | 25.0% |
| ! | AGAAATTTAAAGAATCTCAG+TGG | - | chr4_4:71738004-71738023 | None:intergenic | 25.0% |
| ! | AGCATTTCTCATATATGAAT+AGG | + | chr4_4:71738128-71738147 | Msa0700610:intron | 25.0% |
| ! | ATTAGATTGAAGAAAATACG+TGG | + | chr4_4:71738764-71738783 | Msa0700610:intron | 25.0% |
| ! | TGATCCATCAATTAATGTTA+GGG | + | chr4_4:71738854-71738873 | Msa0700610:intron | 25.0% |
| ! | TTCAGATTTCATCAACTTAT+GGG | + | chr4_4:71739242-71739261 | Msa0700610:CDS | 25.0% |
| ! | ATTGCACATAAAGTTTCAAA+TGG | - | chr4_4:71739507-71739526 | None:intergenic | 25.0% |
| !!! | TGACACTAGTTTGAAAATTT+TGG | + | chr4_4:71739677-71739696 | Msa0700610:CDS | 25.0% |
| ! | GATATAGTAGAAAAAGATCA+AGG | + | chr4_4:71739747-71739766 | Msa0700610:CDS | 25.0% |
| ! | TATAGTAGAAAAAGATCAAG+GGG | + | chr4_4:71739749-71739768 | Msa0700610:CDS | 25.0% |
| ! | TAAGTCAAGAAATGTCAAAT+TGG | - | chr4_4:71739799-71739818 | None:intergenic | 25.0% |
| ! | GTTAGTTGATTGTAAATTTG+GGG | + | chr4_4:71740118-71740137 | Msa0700610:three_prime_UTR | 25.0% |
| !! | ATTTGAGAGTATCTTCAGTT+GGG | + | chr4_4:71732888-71732907 | Msa0700610:CDS | 30.0% |
| GAAACTTCACTATCTTAAAG+TGG | + | chr4_4:71732970-71732989 | Msa0700610:CDS | 30.0% | |
| GATTATTATTTCATCCCTTG+CGG | + | chr4_4:71733067-71733086 | Msa0700610:CDS | 30.0% | |
| GAAGGAGAAAATGATAATTC+TGG | - | chr4_4:71733250-71733269 | None:intergenic | 30.0% | |
| TTAAAGAACCTGCAACAAAA+TGG | - | chr4_4:71733272-71733291 | None:intergenic | 30.0% | |
| TAGAGAGATGCATATGTATT+AGG | - | chr4_4:71733351-71733370 | None:intergenic | 30.0% | |
| ! | TTGTACGTGCAAAATTGTTT+TGG | - | chr4_4:71733578-71733597 | None:intergenic | 30.0% |
| ! | TTCTCTCCAAAAGTGAATTT+TGG | + | chr4_4:71733736-71733755 | Msa0700610:intron | 30.0% |
| AGAAGACCAAATCAACAAAA+TGG | + | chr4_4:71733936-71733955 | Msa0700610:intron | 30.0% | |
| TTTAGCATGACCTAACAAAT+TGG | - | chr4_4:71734013-71734032 | None:intergenic | 30.0% | |
| AACTAACTTCATCGTCTTTA+AGG | + | chr4_4:71734041-71734060 | Msa0700610:intron | 30.0% | |
| !!! | ATATTTTTTTTGGGTAGCCA+AGG | - | chr4_4:71734255-71734274 | None:intergenic | 30.0% |
| CTCGAAAAAAAATTATGCAG+GGG | - | chr4_4:71734876-71734895 | None:intergenic | 30.0% | |
| GCTCGAAAAAAAATTATGCA+GGG | - | chr4_4:71734877-71734896 | None:intergenic | 30.0% | |
| AGCTCGAAAAAAAATTATGC+AGG | - | chr4_4:71734878-71734897 | None:intergenic | 30.0% | |
| !!! | CCTTTCACTCTCATTTTTTA+TGG | - | chr4_4:71734987-71735006 | None:intergenic | 30.0% |
| CCATAAAAAATGAGAGTGAA+AGG | + | chr4_4:71734984-71735003 | Msa0700610:intron | 30.0% | |
| AGAGTGAAAGGAAAGTTAAA+AGG | + | chr4_4:71734996-71735015 | Msa0700610:intron | 30.0% | |
| GAGTGAAAGGAAAGTTAAAA+GGG | + | chr4_4:71734997-71735016 | Msa0700610:intron | 30.0% | |
| ATAGACTCTGTAATTTGAGT+GGG | - | chr4_4:71735290-71735309 | None:intergenic | 30.0% | |
| AATAGACTCTGTAATTTGAG+TGG | - | chr4_4:71735291-71735310 | None:intergenic | 30.0% | |
| TTACACTCTTATTAACCGAA+GGG | - | chr4_4:71735406-71735425 | None:intergenic | 30.0% | |
| ATTACACTCTTATTAACCGA+AGG | - | chr4_4:71735407-71735426 | None:intergenic | 30.0% | |
| ! | AGTAAATCATTTATTGGCCT+TGG | + | chr4_4:71735505-71735524 | Msa0700610:intron | 30.0% |
| CCATAAAAAGTGAAATGGAT+TGG | - | chr4_4:71735561-71735580 | None:intergenic | 30.0% | |
| !!! | CCAATCCATTTCACTTTTTA+TGG | + | chr4_4:71735558-71735577 | Msa0700610:intron | 30.0% |
| CTCTACCATAAAAAGTGAAA+TGG | - | chr4_4:71735566-71735585 | None:intergenic | 30.0% | |
| TGTAGTAGTACTATAATGGT+AGG | - | chr4_4:71735856-71735875 | None:intergenic | 30.0% | |
| TCAAAATATATGCAAGGTTC+GGG | - | chr4_4:71736043-71736062 | None:intergenic | 30.0% | |
| AAGAAATTGGTTGCAAATAC+CGG | - | chr4_4:71736204-71736223 | None:intergenic | 30.0% | |
| AACTTACTTAATTGGATAGG+GGG | - | chr4_4:71736237-71736256 | None:intergenic | 30.0% | |
| GAACTTACTTAATTGGATAG+GGG | - | chr4_4:71736238-71736257 | None:intergenic | 30.0% | |
| GTGAACTTACTTAATTGGAT+AGG | - | chr4_4:71736240-71736259 | None:intergenic | 30.0% | |
| GTTAGGTGAACTTACTTAAT+TGG | - | chr4_4:71736245-71736264 | None:intergenic | 30.0% | |
| TACATGACTTCTGTATGATT+TGG | - | chr4_4:71736316-71736335 | None:intergenic | 30.0% | |
| GGGTACTATACCATTTAATT+TGG | - | chr4_4:71736389-71736408 | None:intergenic | 30.0% | |
| GAAAGAAACTCCTAACTTTA+AGG | - | chr4_4:71736415-71736434 | None:intergenic | 30.0% | |
| ! | GAGTATTATTTAGAGTAGGA+GGG | - | chr4_4:71736459-71736478 | None:intergenic | 30.0% |
| ! | GATGGAGTATTATTTAGAGT+AGG | - | chr4_4:71736463-71736482 | None:intergenic | 30.0% |
| ! | AGTCGTTTAAGGTTTATACA+CGG | + | chr4_4:71736749-71736768 | Msa0700610:intron | 30.0% |
| AGAAGACAGACATAAAAATG+TGG | + | chr4_4:71737047-71737066 | Msa0700610:intron | 30.0% | |
| ! | GCAATACCCTTTTAAACTAA+AGG | + | chr4_4:71737187-71737206 | Msa0700610:intron | 30.0% |
| GAAATGTTAACGAGTATCTT+TGG | + | chr4_4:71737210-71737229 | Msa0700610:intron | 30.0% | |
| CTAGTTTAGTTGCTATAACA+TGG | - | chr4_4:71737870-71737889 | None:intergenic | 30.0% | |
| CATGTTATAGCAACTAAACT+AGG | + | chr4_4:71737868-71737887 | Msa0700610:intron | 30.0% | |
| !! | TAATTATCCCAATTTGTTGC+TGG | + | chr4_4:71737911-71737930 | Msa0700610:intron | 30.0% |
| CATCTCTCATAAAAATGACA+AGG | - | chr4_4:71738233-71738252 | None:intergenic | 30.0% | |
| GGATAAGATGTACATAAGTA+CGG | - | chr4_4:71738378-71738397 | None:intergenic | 30.0% | |
| CACAAAAAGACAAAAAAGAG+AGG | - | chr4_4:71738399-71738418 | None:intergenic | 30.0% | |
| !! | TAAGAAAACTGAAAAGTGTC+AGG | - | chr4_4:71738461-71738480 | None:intergenic | 30.0% |
| GTGATCCATCAATTAATGTT+AGG | + | chr4_4:71738853-71738872 | Msa0700610:intron | 30.0% | |
| TGTTCCCTAACATTAATTGA+TGG | - | chr4_4:71738861-71738880 | None:intergenic | 30.0% | |
| CTTCAAGAATATTCAATGCA+TGG | - | chr4_4:71739118-71739137 | None:intergenic | 30.0% | |
| TAACTCAATTTAAGTGTGGT+GGG | + | chr4_4:71739169-71739188 | Msa0700610:CDS | 30.0% | |
| CTTCAGATTTCATCAACTTA+TGG | + | chr4_4:71739241-71739260 | Msa0700610:CDS | 30.0% | |
| TCAGATTTCATCAACTTATG+GGG | + | chr4_4:71739243-71739262 | Msa0700610:CDS | 30.0% | |
| ! | TTTTAGGCTCAAATTGTTCA+AGG | - | chr4_4:71739274-71739293 | None:intergenic | 30.0% |
| ! | TTTTCGGATCCAAAATTAAG+GGG | - | chr4_4:71739330-71739349 | None:intergenic | 30.0% |
| ! | CTTTTCGGATCCAAAATTAA+GGG | - | chr4_4:71739331-71739350 | None:intergenic | 30.0% |
| !!! | TGTGTCCATTTTTTTGTTGT+TGG | - | chr4_4:71739406-71739425 | None:intergenic | 30.0% |
| TTCTTGCAAGTTGTTCATTA+GGG | - | chr4_4:71739451-71739470 | None:intergenic | 30.0% | |
| ACAACTTGCAAGAACAAATT+TGG | + | chr4_4:71739457-71739476 | Msa0700610:CDS | 30.0% | |
| CAACTTGCAAGAACAAATTT+GGG | + | chr4_4:71739458-71739477 | Msa0700610:CDS | 30.0% | |
| AACTTGCAAGAACAAATTTG+GGG | + | chr4_4:71739459-71739478 | Msa0700610:CDS | 30.0% | |
| ACATAAAGTTTCAAATGGAG+GGG | - | chr4_4:71739502-71739521 | None:intergenic | 30.0% | |
| CACATAAAGTTTCAAATGGA+GGG | - | chr4_4:71739503-71739522 | None:intergenic | 30.0% | |
| AAATGACCAATTGATATGCA+AGG | + | chr4_4:71739626-71739645 | Msa0700610:CDS | 30.0% | |
| !!! | GTGACTGATTTTTTTGTCTA+TGG | + | chr4_4:71739771-71739790 | Msa0700610:CDS | 30.0% |
| AGTGTGTAGTAAACAAATCT+TGG | - | chr4_4:71739864-71739883 | None:intergenic | 30.0% | |
| TTTGTTTACTACACACTTCA+AGG | + | chr4_4:71739867-71739886 | Msa0700610:CDS | 30.0% | |
| TTGTTTACTACACACTTCAA+GGG | + | chr4_4:71739868-71739887 | Msa0700610:CDS | 30.0% | |
| TTCATCTTCTGGCAATATAA+TGG | - | chr4_4:71739958-71739977 | None:intergenic | 30.0% | |
| TATATTGCCAGAAGATGAAA+TGG | + | chr4_4:71739959-71739978 | Msa0700610:CDS | 30.0% | |
| ! | AGTTTTACCATTTCATCTTC+TGG | - | chr4_4:71739969-71739988 | None:intergenic | 30.0% |
| ! | TGAGGGTGATTTTTAATGAT+TGG | + | chr4_4:71740022-71740041 | Msa0700610:exon | 30.0% |
| TTGTGGGAAAACCATATTAG+TGG | - | chr4_4:71732843-71732862 | None:intergenic | 35.0% | |
| !! | GATTTGAGAGTATCTTCAGT+TGG | + | chr4_4:71732887-71732906 | Msa0700610:CDS | 35.0% |
| ! | GATGTTTTTCACAATCCGAA+CGG | + | chr4_4:71732932-71732951 | Msa0700610:CDS | 35.0% |
| !! | ATCTAGAGTTTTGGTGCAAT+TGG | - | chr4_4:71733164-71733183 | None:intergenic | 35.0% |
| !! | AAGCCATTCATCTAGAGTTT+TGG | - | chr4_4:71733173-71733192 | None:intergenic | 35.0% |
| TCGTTTCTCAACAAGTCATT+GGG | + | chr4_4:71733224-71733243 | Msa0700610:CDS | 35.0% | |
| ! | AAGCCTGTAACCAATTTGTT+AGG | + | chr4_4:71734000-71734019 | Msa0700610:intron | 35.0% |
| TGACCTAACAAATTGGTTAC+AGG | - | chr4_4:71734006-71734025 | None:intergenic | 35.0% | |
| !!! | CACAATGTTTTTTTGGTCAC+AGG | - | chr4_4:71734137-71734156 | None:intergenic | 35.0% |
| AACCTAAAGCCTGTAATGTA+AGG | + | chr4_4:71734159-71734178 | Msa0700610:intron | 35.0% | |
| TTCCTTACATTACAGGCTTT+AGG | - | chr4_4:71734164-71734183 | None:intergenic | 35.0% | |
| AAGCCTGTAATGTAAGGAAT+TGG | + | chr4_4:71734165-71734184 | Msa0700610:intron | 35.0% | |
| ACTGTCACATAAAGATTGAG+AGG | + | chr4_4:71734189-71734208 | Msa0700610:intron | 35.0% | |
| GGTCGGTATGTATTTATATC+CGG | + | chr4_4:71734287-71734306 | Msa0700610:intron | 35.0% | |
| ! | AATCGCTCTTTAGAAACGTT+GGG | - | chr4_4:71734623-71734642 | None:intergenic | 35.0% |
| ! | AAATCGCTCTTTAGAAACGT+TGG | - | chr4_4:71734624-71734643 | None:intergenic | 35.0% |
| TAAAAGAACCAACTACACAG+CGG | - | chr4_4:71734904-71734923 | None:intergenic | 35.0% | |
| TAGACTCTGTAATTTGAGTG+GGG | - | chr4_4:71735289-71735308 | None:intergenic | 35.0% | |
| TACACTCTTATTAACCGAAG+GGG | - | chr4_4:71735405-71735424 | None:intergenic | 35.0% | |
| !! | AAAATAATTGGGTTGACGGT+CGG | - | chr4_4:71735537-71735556 | None:intergenic | 35.0% |
| !! | TGGGAAAATAATTGGGTTGA+CGG | - | chr4_4:71735541-71735560 | None:intergenic | 35.0% |
| !!! | TCCTTTTTTTTTGTGGTGGT+CGG | + | chr4_4:71736008-71736027 | Msa0700610:intron | 35.0% |
| CAAAATATATGCAAGGTTCG+GGG | - | chr4_4:71736042-71736061 | None:intergenic | 35.0% | |
| AAAAGTAGCAGTGAGTAGTT+AGG | - | chr4_4:71736262-71736281 | None:intergenic | 35.0% | |
| ! | TGACTTCTGTATGATTTGGA+AGG | - | chr4_4:71736312-71736331 | None:intergenic | 35.0% |
| GAAGTCATGTACAGTGTTTA+TGG | + | chr4_4:71736325-71736344 | Msa0700610:intron | 35.0% | |
| ! | AACTCCTAACTTTAAGGAGA+GGG | - | chr4_4:71736409-71736428 | None:intergenic | 35.0% |
| ! | AAACTCCTAACTTTAAGGAG+AGG | - | chr4_4:71736410-71736429 | None:intergenic | 35.0% |
| GAGTAGTAAAGTAGAGAACA+TGG | - | chr4_4:71736437-71736456 | None:intergenic | 35.0% | |
| ! | GGAGTATTATTTAGAGTAGG+AGG | - | chr4_4:71736460-71736479 | None:intergenic | 35.0% |
| !!! | GACACTCATTTTAAAACGGA+TGG | - | chr4_4:71736481-71736500 | None:intergenic | 35.0% |
| ! | GTAGTGTGCAGAGTATTAAT+TGG | + | chr4_4:71736616-71736635 | Msa0700610:intron | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | + | chr4_4:71736719-71736738 | Msa0700610:intron | 35.0% |
| ! | GTCGTTTAAGGTTTATACAC+GGG | + | chr4_4:71736750-71736769 | Msa0700610:intron | 35.0% |
| AGGTTTATACACGGGTATTA+AGG | + | chr4_4:71736758-71736777 | Msa0700610:intron | 35.0% | |
| AGTTAGTGGAGTAGTTAAGT+TGG | + | chr4_4:71736849-71736868 | Msa0700610:intron | 35.0% | |
| AGACAATTATTATGAGACGG+AGG | + | chr4_4:71736972-71736991 | Msa0700610:intron | 35.0% | |
| GACAATTATTATGAGACGGA+GGG | + | chr4_4:71736973-71736992 | Msa0700610:intron | 35.0% | |
| GATTTACTTAACTAGTGCTC+CGG | + | chr4_4:71737152-71737171 | Msa0700610:intron | 35.0% | |
| ATTTACTTAACTAGTGCTCC+GGG | + | chr4_4:71737153-71737172 | Msa0700610:intron | 35.0% | |
| AACAAAGTTTGGACATGAGA+TGG | - | chr4_4:71737942-71737961 | None:intergenic | 35.0% | |
| !!! | AACTGAAAAGTGTCAGGTTT+TGG | - | chr4_4:71738455-71738474 | None:intergenic | 35.0% |
| ATTGAAGAAAATACGTGGTG+TGG | + | chr4_4:71738769-71738788 | Msa0700610:intron | 35.0% | |
| !! | CTTATCTCTAGTCTTGTGAA+AGG | - | chr4_4:71738804-71738823 | None:intergenic | 35.0% |
| ACGTAGTACTCTATAACTGA+AGG | - | chr4_4:71738912-71738931 | None:intergenic | 35.0% | |
| !! | GAAAAGCATTCATAAGTCGT+TGG | + | chr4_4:71739137-71739156 | Msa0700610:intron | 35.0% |
| CAGGTAACTCAATTTAAGTG+TGG | + | chr4_4:71739165-71739184 | Msa0700610:intron | 35.0% | |
| GTAACTCAATTTAAGTGTGG+TGG | + | chr4_4:71739168-71739187 | Msa0700610:CDS | 35.0% | |
| ! | TGAAATCTGAAGCTGAATGT+GGG | - | chr4_4:71739233-71739252 | None:intergenic | 35.0% |
| ! | ATGAAATCTGAAGCTGAATG+TGG | - | chr4_4:71739234-71739253 | None:intergenic | 35.0% |
| !! | AAAATTAAGGGGTGTTGAGA+CGG | - | chr4_4:71739319-71739338 | None:intergenic | 35.0% |
| ! | CCTTTTCGGATCCAAAATTA+AGG | - | chr4_4:71739332-71739351 | None:intergenic | 35.0% |
| ! | CCTTAATTTTGGATCCGAAA+AGG | + | chr4_4:71739329-71739348 | Msa0700610:CDS | 35.0% |
| !! | AAATGTAGCTGGTTCCTTTT+CGG | - | chr4_4:71739346-71739365 | None:intergenic | 35.0% |
| AGGAACCAGCTACATTTAAA+CGG | + | chr4_4:71739349-71739368 | Msa0700610:CDS | 35.0% | |
| !!! | CCATTTTTTTGTTGTTGGCT+GGG | - | chr4_4:71739401-71739420 | None:intergenic | 35.0% |
| !!! | TCCATTTTTTTGTTGTTGGC+TGG | - | chr4_4:71739402-71739421 | None:intergenic | 35.0% |
| GTTCTTGCAAGTTGTTCATT+AGG | - | chr4_4:71739452-71739471 | None:intergenic | 35.0% | |
| GCACATAAAGTTTCAAATGG+AGG | - | chr4_4:71739504-71739523 | None:intergenic | 35.0% | |
| TGTTTACTACACACTTCAAG+GGG | + | chr4_4:71739869-71739888 | Msa0700610:CDS | 35.0% | |
| CCATCAATATCATTCACCTT+AGG | - | chr4_4:71739924-71739943 | None:intergenic | 35.0% | |
| CCTAAGGTGAATGATATTGA+TGG | + | chr4_4:71739921-71739940 | Msa0700610:CDS | 35.0% | |
| AAATCCGAGCTTAATGTGTA+TGG | + | chr4_4:71739990-71740009 | Msa0700610:CDS | 35.0% | |
| GATACCATACACATTAAGCT+CGG | - | chr4_4:71739997-71740016 | None:intergenic | 35.0% | |
| TGTGTATGGTATCATGTTTG+AGG | + | chr4_4:71740004-71740023 | Msa0700610:CDS | 35.0% | |
| GTGTATGGTATCATGTTTGA+GGG | + | chr4_4:71740005-71740024 | Msa0700610:CDS | 35.0% | |
| ! | TAAATTTGGGGCCTCATTAA+CGG | + | chr4_4:71740130-71740149 | Msa0700610:three_prime_UTR | 35.0% |
| CCATAAACAAACCGTTAATG+AGG | - | chr4_4:71740144-71740163 | None:intergenic | 35.0% | |
| ! | CCTCATTAACGGTTTGTTTA+TGG | + | chr4_4:71740141-71740160 | Msa0700610:three_prime_UTR | 35.0% |
| ! | TTAACGGTTTGTTTATGGCA+TGG | + | chr4_4:71740146-71740165 | Msa0700610:three_prime_UTR | 35.0% |
| AGCTCTCTTTCTCTTCTTGT+GGG | - | chr4_4:71732859-71732878 | None:intergenic | 40.0% | |
| AAGCTCTCTTTCTCTTCTTG+TGG | - | chr4_4:71732860-71732879 | None:intergenic | 40.0% | |
| ! | TTTTCACAATCCGAACGGTT+TGG | + | chr4_4:71732937-71732956 | Msa0700610:CDS | 40.0% |
| GGTTTACTTCTTTGACTCTG+AGG | + | chr4_4:71732991-71733010 | Msa0700610:CDS | 40.0% | |
| ! | CTTAATTGTTAGGCCTTGTG+CGG | - | chr4_4:71733017-71733036 | None:intergenic | 40.0% |
| CAATCATTGCACTTGACGAA+GGG | - | chr4_4:71733121-71733140 | None:intergenic | 40.0% | |
| ACAATCATTGCACTTGACGA+AGG | - | chr4_4:71733122-71733141 | None:intergenic | 40.0% | |
| TTCGTCAAGTGCAATGATTG+TGG | + | chr4_4:71733121-71733140 | Msa0700610:CDS | 40.0% | |
| GCACCAAAACTCTAGATGAA+TGG | + | chr4_4:71733167-71733186 | Msa0700610:CDS | 40.0% | |
| !! | AGATGAATGGCTTGCTATGA+TGG | + | chr4_4:71733180-71733199 | Msa0700610:CDS | 40.0% |
| !! | AATGGCTTGCTATGATGGAT+TGG | + | chr4_4:71733185-71733204 | Msa0700610:CDS | 40.0% |
| TTGAGAAACGAGCAACTTGT+AGG | - | chr4_4:71733215-71733234 | None:intergenic | 40.0% | |
| CTCGTTTCTCAACAAGTCAT+TGG | + | chr4_4:71733223-71733242 | Msa0700610:CDS | 40.0% | |
| ! | TTCTCCTTCCATTTTGTTGC+AGG | + | chr4_4:71733261-71733280 | Msa0700610:CDS | 40.0% |
| AGAACCTGCAACAAAATGGA+AGG | - | chr4_4:71733268-71733287 | None:intergenic | 40.0% | |
| TAATATCACTCCCTAAGGCA+AGG | - | chr4_4:71733522-71733541 | None:intergenic | 40.0% | |
| GTGCCAATTCCTTACATTAC+AGG | - | chr4_4:71734171-71734190 | None:intergenic | 40.0% | |
| ACACTCTTATTAACCGAAGG+GGG | - | chr4_4:71735404-71735423 | None:intergenic | 40.0% | |
| !!! | CCTTTTTTTTTGTGGTGGTC+GGG | + | chr4_4:71736009-71736028 | Msa0700610:intron | 40.0% |
| AGTACCCTCTCCTTAAAGTT+AGG | + | chr4_4:71736402-71736421 | Msa0700610:intron | 40.0% | |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr4_4:71736723-71736742 | Msa0700610:intron | 40.0% |
| !! | TAAGAGTGTCTTTAGGGCAT+TGG | + | chr4_4:71737021-71737040 | Msa0700610:intron | 40.0% |
| TTTACTTAACTAGTGCTCCG+GGG | + | chr4_4:71737154-71737173 | Msa0700610:intron | 40.0% | |
| AAATGTGGGACTGACCTTAA+TGG | - | chr4_4:71737567-71737586 | None:intergenic | 40.0% | |
| TTAGATGGCTAACAAGTTGC+TGG | + | chr4_4:71738338-71738357 | Msa0700610:intron | 40.0% | |
| TCACAAGACTAGAGATAAGC+TGG | + | chr4_4:71738805-71738824 | Msa0700610:intron | 40.0% | |
| ! | AAGCAACATGGACTTTGGAA+TGG | - | chr4_4:71738833-71738852 | None:intergenic | 40.0% |
| ATCACAAGCAACATGGACTT+TGG | - | chr4_4:71738838-71738857 | None:intergenic | 40.0% | |
| ! | TTGATGGATCACAAGCAACA+TGG | - | chr4_4:71738845-71738864 | None:intergenic | 40.0% |
| !!! | TCATAAGTCGTTGGTTTTGC+AGG | + | chr4_4:71739146-71739165 | Msa0700610:intron | 40.0% |
| ! | TAAGTGTGGTGGGATTTCAT+TGG | + | chr4_4:71739179-71739198 | Msa0700610:CDS | 40.0% |
| ! | AAGTGTGGTGGGATTTCATT+GGG | + | chr4_4:71739180-71739199 | Msa0700610:CDS | 40.0% |
| ! | GAATGTTGAAGGGCAGTTTT+AGG | - | chr4_4:71739290-71739309 | None:intergenic | 40.0% |
| ACGGATCTTGGAATGTTGAA+GGG | - | chr4_4:71739300-71739319 | None:intergenic | 40.0% | |
| ! | GTCTCAACACCCCTTAATTT+TGG | + | chr4_4:71739318-71739337 | Msa0700610:CDS | 40.0% |
| GGAACCAGCTACATTTAAAC+GGG | + | chr4_4:71739350-71739369 | Msa0700610:CDS | 40.0% | |
| TCAACCCGTTTAAATGTAGC+TGG | - | chr4_4:71739357-71739376 | None:intergenic | 40.0% | |
| !! | TACATTTAAACGGGTTGACC+CGG | + | chr4_4:71739359-71739378 | Msa0700610:CDS | 40.0% |
| CCCAGCCAACAACAAAAAAA+TGG | + | chr4_4:71739398-71739417 | Msa0700610:CDS | 40.0% | |
| TCATTAGGGAGCTAGTTATG+TGG | - | chr4_4:71739437-71739456 | None:intergenic | 40.0% | |
| ATATCATTGCCCCTACCATT+GGG | - | chr4_4:71739600-71739619 | None:intergenic | 40.0% | |
| TATATCATTGCCCCTACCAT+TGG | - | chr4_4:71739601-71739620 | None:intergenic | 40.0% | |
| TGGTAGGGGCAATGATATAA+TGG | + | chr4_4:71739602-71739621 | Msa0700610:CDS | 40.0% | |
| GGTAGGGGCAATGATATAAT+GGG | + | chr4_4:71739603-71739622 | Msa0700610:CDS | 40.0% | |
| CCTCAACCTTGCATATCAAT+TGG | - | chr4_4:71739635-71739654 | None:intergenic | 40.0% | |
| CCAATTGATATGCAAGGTTG+AGG | + | chr4_4:71739632-71739651 | Msa0700610:CDS | 40.0% | |
| !!! | AATTTTGGCTAGCATGCTTG+TGG | + | chr4_4:71739692-71739711 | Msa0700610:CDS | 40.0% |
| !!! | TGTTGTTTTGGTGCTTCCTA+AGG | + | chr4_4:71739905-71739924 | Msa0700610:CDS | 40.0% |
| GATAGTGAAGTTTCATGGCC+AGG | - | chr4_4:71732964-71732983 | None:intergenic | 45.0% | |
| TTGTGGAGCAAGAACCATTG+AGG | + | chr4_4:71733138-71733157 | Msa0700610:CDS | 45.0% | |
| ! | TTTGGTGCAATTGGCCTCAA+TGG | - | chr4_4:71733155-71733174 | None:intergenic | 45.0% |
| GAAACGAGCAACTTGTAGGA+AGG | - | chr4_4:71733211-71733230 | None:intergenic | 45.0% | |
| TTTCGTACTCTCCTTGCCTT+AGG | + | chr4_4:71733508-71733527 | Msa0700610:intron | 45.0% | |
| TTCGTACTCTCCTTGCCTTA+GGG | + | chr4_4:71733509-71733528 | Msa0700610:intron | 45.0% | |
| ! | AGATTGAGAGGTGTAGTTGC+AGG | + | chr4_4:71734201-71734220 | Msa0700610:intron | 45.0% |
| ! | GATTGAGAGGTGTAGTTGCA+GGG | + | chr4_4:71734202-71734221 | Msa0700610:intron | 45.0% |
| ! | ATTGAGAGGTGTAGTTGCAG+GGG | + | chr4_4:71734203-71734222 | Msa0700610:intron | 45.0% |
| GTGTAGCCCTTCATATGTGA+GGG | + | chr4_4:71734225-71734244 | Msa0700610:intron | 45.0% | |
| TGTAGCCCTTCATATGTGAG+GGG | + | chr4_4:71734226-71734245 | Msa0700610:intron | 45.0% | |
| AATTGAGAGAACACCCCCTT+CGG | + | chr4_4:71735388-71735407 | Msa0700610:intron | 45.0% | |
| CCCGACCACCACAAAAAAAA+AGG | - | chr4_4:71736012-71736031 | None:intergenic | 45.0% | |
| CGACTCTAACACAATTTCGC+CGG | + | chr4_4:71736182-71736201 | Msa0700610:intron | 45.0% | |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr4_4:71736722-71736741 | Msa0700610:intron | 45.0% |
| TTACTTAACTAGTGCTCCGG+GGG | + | chr4_4:71737155-71737174 | Msa0700610:intron | 45.0% | |
| GATCTTAACCCCCTCCATTA+AGG | + | chr4_4:71737550-71737569 | Msa0700610:intron | 45.0% | |
| GGTCAGTCCCACATTTATCA+AGG | + | chr4_4:71737571-71737590 | Msa0700610:intron | 45.0% | |
| GGACAGACCAGCAACAAATT+GGG | - | chr4_4:71737921-71737940 | None:intergenic | 45.0% | |
| TGGACAGACCAGCAACAAAT+TGG | - | chr4_4:71737922-71737941 | None:intergenic | 45.0% | |
| ! | CTCAGTGGTGTCAATAGTGA+TGG | - | chr4_4:71737989-71738008 | None:intergenic | 45.0% |
| GATTTCATTGGGCCTTAGCT+GGG | + | chr4_4:71739191-71739210 | Msa0700610:CDS | 45.0% | |
| GACGGATCTTGGAATGTTGA+AGG | - | chr4_4:71739301-71739320 | None:intergenic | 45.0% | |
| TAGGGAGCTAGTTATGTGGA+AGG | - | chr4_4:71739433-71739452 | None:intergenic | 45.0% | |
| TATCATTGCCCCTACCATTG+GGG | - | chr4_4:71739599-71739618 | None:intergenic | 45.0% | |
| TTGATATGCAAGGTTGAGGC+AGG | + | chr4_4:71739636-71739655 | Msa0700610:CDS | 45.0% | |
| TTACTACACACTTCAAGGGG+TGG | + | chr4_4:71739872-71739891 | Msa0700610:CDS | 45.0% | |
| TACTACACACTTCAAGGGGT+GGG | + | chr4_4:71739873-71739892 | Msa0700610:CDS | 45.0% | |
| !!! | GGGAGATGAAGGTGTTGTTT+TGG | + | chr4_4:71739893-71739912 | Msa0700610:CDS | 45.0% |
| !!! | TGTTTTAAATAAAAATTTTA+AGG | + | chr4_4:71733781-71733800 | Msa0700610:intron | 5.0% |
| ! | AGAGTATCTTCAGTTGGGCC+AGG | + | chr4_4:71732893-71732912 | Msa0700610:CDS | 50.0% |
| GTGAAAAACATCCGACCCAG+TGG | - | chr4_4:71732924-71732943 | None:intergenic | 50.0% | |
| GGTGTAGCCCTTCATATGTG+AGG | + | chr4_4:71734224-71734243 | Msa0700610:intron | 50.0% | |
| GGCTACCCCTCACATATGAA+GGG | - | chr4_4:71734234-71734253 | None:intergenic | 50.0% | |
| AGGCTACCCCTCACATATGA+AGG | - | chr4_4:71734235-71734254 | None:intergenic | 50.0% | |
| TCATATGTGAGGGGTAGCCT+TGG | + | chr4_4:71734235-71734254 | Msa0700610:intron | 50.0% | |
| ACGGAGGGAGTAGTCGTTTA+AGG | + | chr4_4:71736738-71736757 | Msa0700610:intron | 50.0% | |
| GTATTGCTAACCAATGCCCC+CGG | - | chr4_4:71737174-71737193 | None:intergenic | 50.0% | |
| TGGGACTGACCTTAATGGAG+GGG | - | chr4_4:71737562-71737581 | None:intergenic | 50.0% | |
| GTGGGACTGACCTTAATGGA+GGG | - | chr4_4:71737563-71737582 | None:intergenic | 50.0% | |
| TGTGGGACTGACCTTAATGG+AGG | - | chr4_4:71737564-71737583 | None:intergenic | 50.0% | |
| ! | TGTGCATGAGAGTATGTGCG+AGG | + | chr4_4:71738415-71738434 | Msa0700610:intron | 50.0% |
| GGATTTCATTGGGCCTTAGC+TGG | + | chr4_4:71739190-71739209 | Msa0700610:CDS | 50.0% | |
| CTTAGCTGGGCCCATGTTAT+GGG | + | chr4_4:71739204-71739223 | Msa0700610:CDS | 50.0% | |
| TTAGCTGGGCCCATGTTATG+GGG | + | chr4_4:71739205-71739224 | Msa0700610:CDS | 50.0% | |
| ATGTGGGTCCCCCATAACAT+GGG | - | chr4_4:71739217-71739236 | None:intergenic | 50.0% | |
| AATGTGGGTCCCCCATAACA+TGG | - | chr4_4:71739218-71739237 | None:intergenic | 50.0% | |
| !! | TTTAAACGGGTTGACCCGGT+TGG | + | chr4_4:71739363-71739382 | Msa0700610:CDS | 50.0% |
| !! | TTGACCCGGTTGGTGATCAT+TGG | + | chr4_4:71739373-71739392 | Msa0700610:CDS | 50.0% |
| GGATCCAATGATCACCAACC+GGG | - | chr4_4:71739380-71739399 | None:intergenic | 50.0% | |
| GGGATCCAATGATCACCAAC+CGG | - | chr4_4:71739381-71739400 | None:intergenic | 50.0% | |
| ! | GGAGGGGTTTGTTCAACACT+TGG | - | chr4_4:71739486-71739505 | None:intergenic | 50.0% |
| TTCGGATCCTTCTCGAACTC+GGG | - | chr4_4:71739547-71739566 | None:intergenic | 50.0% | |
| GTTCGGATCCTTCTCGAACT+CGG | - | chr4_4:71739548-71739567 | None:intergenic | 50.0% | |
| AACTGTCACGGTTGTGGGTT+CGG | - | chr4_4:71739565-71739584 | None:intergenic | 50.0% | |
| CGACAAACTGTCACGGTTGT+GGG | - | chr4_4:71739570-71739589 | None:intergenic | 50.0% | |
| TCGACAAACTGTCACGGTTG+TGG | - | chr4_4:71739571-71739590 | None:intergenic | 50.0% | |
| GCTAGCATGCTTGTGGATCA+AGG | + | chr4_4:71739699-71739718 | Msa0700610:CDS | 50.0% | |
| ! | CAATCCGAACGGTTTGGACC+TGG | + | chr4_4:71732943-71732962 | Msa0700610:CDS | 55.0% |
| ATGGCCAGGTCCAAACCGTT+CGG | - | chr4_4:71732950-71732969 | None:intergenic | 55.0% | |
| !! | TTTGACTCTGAGGCCGCACA+AGG | + | chr4_4:71733001-71733020 | Msa0700610:CDS | 55.0% |
| CAGATTCCGATCGCCGGAAT+CGG | - | chr4_4:71733093-71733112 | None:intergenic | 55.0% | |
| TTGACGGTCGGTCTCAACCA+AGG | - | chr4_4:71735525-71735544 | None:intergenic | 55.0% | |
| GGGACTGACCTTAATGGAGG+GGG | - | chr4_4:71737561-71737580 | None:intergenic | 55.0% | |
| CCATAACATGGGCCCAGCTA+AGG | - | chr4_4:71739206-71739225 | None:intergenic | 55.0% | |
| CCTTAGCTGGGCCCATGTTA+TGG | + | chr4_4:71739203-71739222 | Msa0700610:CDS | 55.0% | |
| TAGCTGGGCCCATGTTATGG+GGG | + | chr4_4:71739206-71739225 | Msa0700610:CDS | 55.0% | |
| !! | AGGGGTGTTGAGACGGATCT+TGG | - | chr4_4:71739312-71739331 | None:intergenic | 55.0% |
| TGCATAGCCCGAGTTCGAGA+AGG | + | chr4_4:71739537-71739556 | Msa0700610:CDS | 55.0% | |
| GTCGGGTCGACAAACTGTCA+CGG | - | chr4_4:71739577-71739596 | None:intergenic | 55.0% | |
| ATTGCCCCTACCATTGGGGT+CGG | - | chr4_4:71739595-71739614 | None:intergenic | 55.0% | |
| CTTCAAGGGGTGGGAGATGA+AGG | + | chr4_4:71739882-71739901 | Msa0700610:CDS | 55.0% | |
| TTGGGCCAGGTCATGCCACT+GGG | + | chr4_4:71732906-71732925 | Msa0700610:CDS | 60.0% | |
| ! | TCATCCCTTGCGGCCGATTC+CGG | + | chr4_4:71733077-71733096 | Msa0700610:CDS | 60.0% |
| CGATTCCGGCGATCGGAATC+TGG | + | chr4_4:71733091-71733110 | Msa0700610:CDS | 60.0% | |
| GTCGACCAGATTCCGATCGC+CGG | - | chr4_4:71733099-71733118 | None:intergenic | 60.0% | |
| GAGCTTCGCCGCTGTGTAGT+TGG | + | chr4_4:71734893-71734912 | Msa0700610:intron | 60.0% | |
| ! | AACTAGTGCTCCGGGGGCAT+TGG | + | chr4_4:71737161-71737180 | Msa0700610:intron | 60.0% |
| GTTTGTCGACCCGACCCCAA+TGG | + | chr4_4:71739582-71739601 | Msa0700610:CDS | 60.0% | |
| TCGACCCGACCCCAATGGTA+GGG | + | chr4_4:71739587-71739606 | Msa0700610:CDS | 60.0% | |
| TTGCCCCTACCATTGGGGTC+GGG | - | chr4_4:71739594-71739613 | None:intergenic | 60.0% | |
| GTTGGGCCAGGTCATGCCAC+TGG | + | chr4_4:71732905-71732924 | Msa0700610:CDS | 65.0% | |
| GCCAGGTCATGCCACTGGGT+CGG | + | chr4_4:71732910-71732929 | Msa0700610:CDS | 65.0% | |
| TCCGACCCAGTGGCATGACC+TGG | - | chr4_4:71732914-71732933 | None:intergenic | 65.0% | |
| ATCGCCGGAATCGGCCGCAA+GGG | - | chr4_4:71733084-71733103 | None:intergenic | 65.0% | |
| ! | TTGCGGCCGATTCCGGCGAT+CGG | + | chr4_4:71733084-71733103 | Msa0700610:CDS | 65.0% |
| GTCGACCCGACCCCAATGGT+AGG | + | chr4_4:71739586-71739605 | Msa0700610:CDS | 65.0% | |
| CGACCCGACCCCAATGGTAG+GGG | + | chr4_4:71739588-71739607 | Msa0700610:CDS | 65.0% | |
| GATCGCCGGAATCGGCCGCA+AGG | - | chr4_4:71733085-71733104 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 71732786 | 71740212 | 71732786 | ID=Msa0700610;Name=Msa0700610 |
| chr4_4 | mRNA | 71732786 | 71740212 | 71732786 | ID=Msa0700610-mRNA-1;Parent=Msa0700610;Name=Msa0700610-mRNA-1;_AED=0.03;_eAED=0.03;_QI=62|1|1|1|1|1|2|175|434 |
| chr4_4 | exon | 71732786 | 71733282 | 71732786 | ID=Msa0700610-mRNA-1:exon:21837;Parent=Msa0700610-mRNA-1 |
| chr4_4 | exon | 71739168 | 71740212 | 71739168 | ID=Msa0700610-mRNA-1:exon:21838;Parent=Msa0700610-mRNA-1 |
| chr4_4 | five_prime_UTR | 71732786 | 71732847 | 71732786 | ID=Msa0700610-mRNA-1:five_prime_utr;Parent=Msa0700610-mRNA-1 |
| chr4_4 | CDS | 71732848 | 71733282 | 71732848 | ID=Msa0700610-mRNA-1:cds;Parent=Msa0700610-mRNA-1 |
| chr4_4 | CDS | 71739168 | 71740037 | 71739168 | ID=Msa0700610-mRNA-1:cds;Parent=Msa0700610-mRNA-1 |
| chr4_4 | three_prime_UTR | 71740038 | 71740212 | 71740038 | ID=Msa0700610-mRNA-1:three_prime_utr;Parent=Msa0700610-mRNA-1 |
| Gene Sequence |
| Protein sequence |
