Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0564150 | XP_003629600.2 | 95.161 | 434 | 21 | 0 | 1 | 434 | 1 | 434 | 0.0 | 856 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0564150 | sp|Q9LIS1|CR26L_ARATH | 42.494 | 433 | 228 | 10 | 1 | 429 | 1 | 416 | 7.73e-106 | 322 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0564150 | A0A396GN49 | 95.161 | 434 | 21 | 0 | 1 | 434 | 1 | 434 | 0.0 | 856 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0514280 | Msa0564150 | 0.807721 | 4.401928e-50 | -8.615850e-47 |
| Msa0564150 | Msa0617650 | 0.963783 | 1.647964e-122 | -8.615850e-47 |
| Msa0564150 | Msa0656950 | 0.944217 | 2.920954e-103 | -8.615850e-47 |
| Msa0564150 | Msa0700610 | 0.936745 | 1.061252e-97 | -8.615850e-47 |
| Msa0564150 | Msa0700850 | 0.827382 | 1.613913e-54 | -8.615850e-47 |
| Msa0564150 | Msa1122920 | 0.803975 | 2.697400e-49 | -8.615850e-47 |
| Msa0564150 | Msa1129150 | 0.831160 | 1.954385e-55 | -8.615850e-47 |
| Msa0564150 | Msa1129440 | 0.800198 | 1.612858e-48 | -8.615850e-47 |
| Msa0564150 | Msa1143380 | 0.973877 | 3.532093e-137 | -8.615850e-47 |
| Msa0564150 | Msa1178470 | 0.815286 | 9.992373e-52 | -8.615850e-47 |
| Msa0564150 | Msa1214730 | 0.832574 | 8.744446e-56 | -8.615850e-47 |
| Msa0564150 | Msa1214870 | 0.823542 | 1.309714e-53 | -8.615850e-47 |
| Msa0564150 | Msa1294730 | 0.802824 | 4.669603e-49 | -8.615850e-47 |
| Msa0564150 | Msa1300850 | 0.828380 | 9.282511e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0564150 | MtrunA17_Chr8g0378151 | 95.161 | 434 | 21 | 0 | 1 | 434 | 1 | 434 | 0.0 | 856 |
| Msa0564150 | MtrunA17_Chr2g0298091 | 41.667 | 420 | 226 | 8 | 16 | 423 | 16 | 428 | 5.60e-100 | 305 |
| Msa0564150 | MtrunA17_Chr3g0132831 | 38.517 | 418 | 243 | 8 | 16 | 423 | 15 | 428 | 4.58e-95 | 293 |
| Msa0564150 | MtrunA17_Chr1g0163441 | 37.123 | 431 | 250 | 9 | 16 | 431 | 15 | 439 | 6.74e-90 | 279 |
| Msa0564150 | MtrunA17_Chr1g0148851 | 25.124 | 402 | 282 | 9 | 37 | 419 | 30 | 431 | 1.55e-28 | 116 |
| Msa0564150 | MtrunA17_Chr7g0274021 | 24.524 | 420 | 275 | 12 | 32 | 419 | 28 | 437 | 5.09e-28 | 115 |
| Msa0564150 | MtrunA17_Chr4g0001861 | 30.964 | 197 | 116 | 3 | 1 | 196 | 10 | 187 | 1.57e-17 | 84.3 |
| Msa0564150 | MtrunA17_Chr2g0334001 | 24.890 | 454 | 272 | 22 | 8 | 423 | 6 | 428 | 1.63e-16 | 81.3 |
| Msa0564150 | MtrunA17_Chr7g0224391 | 30.726 | 179 | 121 | 2 | 20 | 196 | 24 | 201 | 2.62e-15 | 77.4 |
| Msa0564150 | MtrunA17_Chr8g0386141 | 31.169 | 154 | 103 | 2 | 46 | 196 | 39 | 192 | 6.48e-15 | 76.3 |
| Msa0564150 | MtrunA17_Chr3g0087401 | 25.954 | 262 | 169 | 7 | 37 | 278 | 26 | 282 | 3.11e-14 | 74.3 |
| Msa0564150 | MtrunA17_Chr7g0273791 | 30.075 | 133 | 91 | 1 | 49 | 179 | 49 | 181 | 2.79e-13 | 71.6 |
| Msa0564150 | MtrunA17_Chr8g0371821 | 24.000 | 250 | 178 | 5 | 43 | 284 | 34 | 279 | 6.04e-13 | 70.1 |
| Msa0564150 | MtrunA17_Chr4g0004691 | 30.882 | 136 | 87 | 3 | 61 | 190 | 49 | 183 | 3.65e-12 | 65.1 |
| Msa0564150 | MtrunA17_Chr3g0132001 | 30.519 | 154 | 104 | 2 | 46 | 196 | 46 | 199 | 3.99e-12 | 67.8 |
| Msa0564150 | MtrunA17_Chr8g0376901 | 21.525 | 446 | 282 | 17 | 19 | 425 | 10 | 426 | 1.96e-11 | 65.5 |
| Msa0564150 | MtrunA17_Chr7g0273721 | 32.374 | 139 | 88 | 4 | 46 | 179 | 45 | 182 | 3.14e-11 | 65.1 |
| Msa0564150 | MtrunA17_Chr7g0273761 | 28.358 | 134 | 93 | 2 | 49 | 179 | 421 | 554 | 4.98e-11 | 65.1 |
| Msa0564150 | MtrunA17_Chr5g0433641 | 30.827 | 133 | 90 | 1 | 49 | 179 | 49 | 181 | 6.03e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0564150 | AT3G23840.1 | 42.494 | 433 | 228 | 10 | 1 | 429 | 1 | 416 | 7.86e-107 | 322 |
| Msa0564150 | AT4G13840.1 | 39.019 | 428 | 250 | 6 | 5 | 429 | 7 | 426 | 3.82e-105 | 318 |
| Msa0564150 | AT4G24510.1 | 34.499 | 429 | 250 | 11 | 10 | 423 | 4 | 416 | 2.96e-84 | 265 |
| Msa0564150 | AT2G19070.1 | 26.392 | 413 | 250 | 18 | 38 | 407 | 29 | 430 | 1.69e-18 | 87.8 |
| Msa0564150 | AT4G29250.1 | 24.550 | 444 | 261 | 18 | 19 | 419 | 27 | 439 | 2.00e-17 | 84.7 |
| Msa0564150 | AT5G48930.1 | 24.291 | 247 | 178 | 4 | 35 | 274 | 25 | 269 | 2.99e-14 | 74.7 |
| Msa0564150 | AT5G41040.1 | 33.962 | 159 | 99 | 3 | 46 | 201 | 65 | 220 | 3.62e-14 | 74.7 |
| Msa0564150 | AT5G41040.2 | 33.962 | 159 | 99 | 3 | 46 | 201 | 49 | 204 | 3.79e-14 | 74.3 |
| Msa0564150 | AT5G57840.1 | 22.384 | 411 | 290 | 10 | 35 | 420 | 25 | 431 | 1.12e-13 | 73.2 |
| Msa0564150 | AT5G63560.1 | 30.636 | 173 | 104 | 5 | 43 | 199 | 27 | 199 | 1.55e-13 | 72.4 |
| Msa0564150 | AT3G48720.1 | 30.323 | 155 | 104 | 3 | 46 | 196 | 41 | 195 | 2.80e-13 | 71.6 |
| Msa0564150 | AT1G65450.1 | 27.049 | 244 | 167 | 6 | 46 | 278 | 51 | 294 | 4.60e-12 | 68.2 |
Find 136 sgRNAs with CRISPR-Local
Find 561 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAACTTGCAAGAACAAATT+TGG | 0.140491 | 4_1:+64739379 | Msa0564150:CDS |
| TGACACTAGTTTGAAAATTT+TGG | 0.151455 | 4_1:+64739599 | Msa0564150:CDS |
| GTCTCAACACCCCTTAATTT+TGG | 0.157335 | 4_1:+64739240 | Msa0564150:CDS |
| CCTTAGCTGGGCCCATGTTA+TGG | 0.166786 | 4_1:+64739125 | Msa0564150:CDS |
| AAACTTTATGTGCAATAATT+TGG | 0.180735 | 4_1:+64739433 | Msa0564150:CDS |
| CTTAGCTGGGCCCATGTTAT+GGG | 0.193486 | 4_1:+64739126 | Msa0564150:CDS |
| CTTCAGATTTCATCAACTTA+TGG | 0.205690 | 4_1:+64739163 | Msa0564150:CDS |
| GGATTTCATTGGGCCTTAGC+TGG | 0.223582 | 4_1:+64739112 | Msa0564150:CDS |
| AAGCTTAATAACCACTAATA+TGG | 0.238110 | 4_1:+64732474 | Msa0564150:exon |
| GTTCTTGCAAGTTGTTCATT+AGG | 0.260077 | 4_1:-64739371 | None:intergenic |
| TTCAGATTTCATCAACTTAT+GGG | 0.298539 | 4_1:+64739164 | Msa0564150:CDS |
| TGGTAGGGGCAATGATATAA+TGG | 0.301115 | 4_1:+64739524 | Msa0564150:CDS |
| TCATCCCTTGCGGCCGATTC+CGG | 0.304819 | 4_1:+64732722 | Msa0564150:CDS |
| TGATGAAAGAAATCAAATTA+TGG | 0.305939 | 4_1:+64739647 | Msa0564150:CDS |
| ATATCATTGCCCCTACCATT+AGG | 0.319594 | 4_1:-64739519 | None:intergenic |
| TTAAAGACAATAAAGATTAA+AGG | 0.330122 | 4_1:+64740018 | Msa0564150:three_prime_UTR |
| TTCTTGCAAGTTGTTCATTA+GGG | 0.331603 | 4_1:-64739370 | None:intergenic |
| AAGCCATTCATCTAGAGTTT+TGG | 0.331771 | 4_1:-64732815 | None:intergenic |
| CTCGTTTCTCAACAAGTCAT+TGG | 0.333685 | 4_1:+64732868 | Msa0564150:CDS |
| TGTGTATGACTTAAAATTAA+AGG | 0.335448 | 4_1:+64739752 | Msa0564150:CDS |
| TTTAAGATAGTGAAGTTTCA+TGG | 0.343891 | 4_1:-64732611 | None:intergenic |
| GGGAGATGAAGGTGTTGTTT+TGG | 0.345479 | 4_1:+64739815 | Msa0564150:CDS |
| TTCATCTTCTGGCAATATAA+TGG | 0.352304 | 4_1:-64739877 | None:intergenic |
| TTGACCCGGTTGGTGATCAT+TGG | 0.353117 | 4_1:+64739295 | Msa0564150:CDS |
| CAACTTGCAAGAACAAATTT+GGG | 0.358829 | 4_1:+64739380 | Msa0564150:CDS |
| TTAAAGAACCTGCAACAAAA+TGG | 0.359088 | 4_1:-64732914 | None:intergenic |
| TATCATTGCCCCTACCATTA+GGG | 0.360008 | 4_1:-64739518 | None:intergenic |
| CGATTCCGGCGATCGGAATC+TGG | 0.360082 | 4_1:+64732736 | Msa0564150:CDS |
| GAAGGAGAAAATGATAATTC+TGG | 0.360908 | 4_1:-64732892 | None:intergenic |
| TTGAGAAACGAGCAACTTGT+AGG | 0.365130 | 4_1:-64732857 | None:intergenic |
| AACTGTCACGGTTGTGGGTT+CGG | 0.365252 | 4_1:-64739484 | None:intergenic |
| GTTGGGCCAGGTCATGCCAC+TGG | 0.366990 | 4_1:+64732550 | Msa0564150:CDS |
| AAGTGTGGTGGGATTTCATT+GGG | 0.369203 | 4_1:+64739102 | Msa0564150:CDS |
| AGGAACCAGCTACATTTAAA+CGG | 0.370152 | 4_1:+64739271 | Msa0564150:CDS |
| TTGAAAGATACAAGAGGCTT+TGG | 0.372426 | 4_1:-64732429 | None:intergenic |
| TAAGTCAAGAAATGTCAAAT+TGG | 0.372854 | 4_1:-64739718 | None:intergenic |
| AGGGGTGTTGAGACGGATCT+TGG | 0.389004 | 4_1:-64739231 | None:intergenic |
| TTTGGTGCAATTGGCCTCAA+TGG | 0.403810 | 4_1:-64732797 | None:intergenic |
| TTTGTTTACTACACACTTCA+AGG | 0.403996 | 4_1:+64739789 | Msa0564150:CDS |
| AGTGTGTAGTAAACAAATCT+TGG | 0.405045 | 4_1:-64739783 | None:intergenic |
| TTGTGGGAAAACCATATTAG+TGG | 0.409995 | 4_1:-64732485 | None:intergenic |
| AAGCTCTCTTTCTCTTCTTG+TGG | 0.410113 | 4_1:-64732502 | None:intergenic |
| AGATGAATGGCTTGCTATGA+TGG | 0.415307 | 4_1:+64732825 | Msa0564150:CDS |
| GTGTATGACTTAAAATTAAA+GGG | 0.419239 | 4_1:+64739753 | Msa0564150:CDS |
| GTTCGGATCCTTCTCGAACT+CGG | 0.421086 | 4_1:-64739467 | None:intergenic |
| TCGACAAACTGTCACGGTTG+TGG | 0.425168 | 4_1:-64739490 | None:intergenic |
| GGTAGGGGCAATGATATAAT+GGG | 0.427066 | 4_1:+64739525 | Msa0564150:CDS |
| GATTTCATTGGGCCTTAGCT+GGG | 0.427691 | 4_1:+64739113 | Msa0564150:CDS |
| CAGATTCCGATCGCCGGAAT+CGG | 0.429202 | 4_1:-64732735 | None:intergenic |
| GGTTATTAAGCTTATAAGAA+AGG | 0.429802 | 4_1:-64732464 | None:intergenic |
| TATATTGCCAGAAGATGAAA+TGG | 0.440744 | 4_1:+64739881 | Msa0564150:CDS |
| ATTGCACATAAAGTTTCAAA+TGG | 0.442525 | 4_1:-64739426 | None:intergenic |
| CACATAAAGTTTCAAATGGA+GGG | 0.442722 | 4_1:-64739422 | None:intergenic |
| AGCTCTCTTTCTCTTCTTGT+GGG | 0.443480 | 4_1:-64732501 | None:intergenic |
| CGACAAACTGTCACGGTTGT+GGG | 0.445047 | 4_1:-64739489 | None:intergenic |
| TCGTTTCTCAACAAGTCATT+GGG | 0.447263 | 4_1:+64732869 | Msa0564150:CDS |
| GGAACCAGCTACATTTAAAC+GGG | 0.448779 | 4_1:+64739272 | Msa0564150:CDS |
| CCTAAGGTGAATGATATTGA+TGG | 0.452041 | 4_1:+64739843 | Msa0564150:CDS |
| TTCGGATCCTTCTCGAACTC+GGG | 0.459230 | 4_1:-64739466 | None:intergenic |
| CCTCAACCTTGCATATCAAT+TGG | 0.459576 | 4_1:-64739554 | None:intergenic |
| TAAGTGTGGTGGGATTTCAT+TGG | 0.465833 | 4_1:+64739101 | Msa0564150:CDS |
| GCTAGCATGCTTGTGGATCA+AGG | 0.466138 | 4_1:+64739621 | Msa0564150:CDS |
| TTAGCTGGGCCCATGTTATG+GGG | 0.467497 | 4_1:+64739127 | Msa0564150:CDS |
| AAATCCGAGCTTAATGTGTA+TGG | 0.468103 | 4_1:+64739912 | Msa0564150:CDS |
| CTTCAAGGGGTGGGAGATGA+AGG | 0.469388 | 4_1:+64739804 | Msa0564150:CDS |
| CCATCAATATCATTCACCTT+AGG | 0.474137 | 4_1:-64739843 | None:intergenic |
| GGGATCCAATGATCACCAAC+CGG | 0.475921 | 4_1:-64739300 | None:intergenic |
| ATGGCCAGGTCCAAACCATT+CGG | 0.479216 | 4_1:-64732592 | None:intergenic |
| GATAGTGAAGTTTCATGGCC+AGG | 0.479627 | 4_1:-64732606 | None:intergenic |
| GAAACTTCACTATCTTAAAG+TGG | 0.479693 | 4_1:+64732615 | Msa0564150:CDS |
| GACGGATCTTGGAATGTTGA+AGG | 0.485139 | 4_1:-64739220 | None:intergenic |
| AACAATTAAGAAAATAAAAG+AGG | 0.487357 | 4_1:+64732672 | Msa0564150:CDS |
| ATTTGAGAGTATCTTCAGTT+GGG | 0.488025 | 4_1:+64732533 | Msa0564150:CDS |
| GGAGGGGTTTGTTCAACACT+TGG | 0.494342 | 4_1:-64739405 | None:intergenic |
| TACATTTAAACGGGTTGACC+CGG | 0.497184 | 4_1:+64739281 | Msa0564150:CDS |
| GTTTGTCGACCCGACCCTAA+TGG | 0.497568 | 4_1:+64739504 | Msa0564150:CDS |
| CCATAACATGGGCCCAGCTA+AGG | 0.499246 | 4_1:-64739125 | None:intergenic |
| TCAACCCGTTTAAATGTAGC+TGG | 0.502437 | 4_1:-64739276 | None:intergenic |
| AATGGCTTGCTATGATGGAT+TGG | 0.507896 | 4_1:+64732830 | Msa0564150:CDS |
| TTGCGGCCGATTCCGGCGAT+CGG | 0.508580 | 4_1:+64732729 | Msa0564150:CDS |
| GCACCAAAACTCTAGATGAA+TGG | 0.514485 | 4_1:+64732812 | Msa0564150:CDS |
| TTGATATGCAAGGTTGAGGC+AGG | 0.515574 | 4_1:+64739558 | Msa0564150:CDS |
| AGAGTATCTTCAGTTGGGCC+AGG | 0.515864 | 4_1:+64732538 | Msa0564150:CDS |
| TCCGACCCAGTGGCATGACC+TGG | 0.523816 | 4_1:-64732556 | None:intergenic |
| CCACTTGCGTATTGCGCTAG+AGG | 0.528148 | 4_1:-64740134 | None:intergenic |
| GCACATAAAGTTTCAAATGG+AGG | 0.536084 | 4_1:-64739423 | None:intergenic |
| GTCGACCAGATTCCGATCGC+CGG | 0.538465 | 4_1:-64732741 | None:intergenic |
| TACTACACACTTCAAGGGGT+GGG | 0.539191 | 4_1:+64739795 | Msa0564150:CDS |
| TCGACCCGACCCTAATGGTA+GGG | 0.545566 | 4_1:+64739509 | Msa0564150:CDS |
| GATCGCCGGAATCGGCCGCA+AGG | 0.546043 | 4_1:-64732727 | None:intergenic |
| TTGTTTACTACACACTTCAA+GGG | 0.547045 | 4_1:+64739790 | Msa0564150:CDS |
| TAACTCAATTTAAGTGTGGT+GGG | 0.547840 | 4_1:+64739091 | Msa0564150:CDS |
| TTGGGCCAGGTCATGCCACT+GGG | 0.547919 | 4_1:+64732551 | Msa0564150:CDS |
| GTGTATGGTATCATGTTTGA+GGG | 0.549776 | 4_1:+64739927 | Msa0564150:CDS |
| TTGCCCCTACCATTAGGGTC+GGG | 0.551150 | 4_1:-64739513 | None:intergenic |
| ATCGCCGGAATCGGCCGCAA+GGG | 0.554171 | 4_1:-64732726 | None:intergenic |
| GATTTGAGAGTATCTTCAGT+TGG | 0.555245 | 4_1:+64732532 | Msa0564150:CDS |
| ACATAAAGTTTCAAATGGAG+GGG | 0.558070 | 4_1:-64739421 | None:intergenic |
| GCCAGGTCATGCCACTGGGT+CGG | 0.558921 | 4_1:+64732555 | Msa0564150:CDS |
| CAATCCGAATGGTTTGGACC+TGG | 0.560745 | 4_1:+64732588 | Msa0564150:CDS |
| ATTGCCCCTACCATTAGGGT+CGG | 0.561243 | 4_1:-64739514 | None:intergenic |
| GTAACTCAATTTAAGTGTGG+TGG | 0.561280 | 4_1:+64739090 | Msa0564150:CDS |
| TGTGTATGGTATCATGTTTG+AGG | 0.561998 | 4_1:+64739926 | Msa0564150:CDS |
| AAAATTAAGGGGTGTTGAGA+CGG | 0.562724 | 4_1:-64739238 | None:intergenic |
| TTTGACTCTGAGGCCGCACA+AGG | 0.563433 | 4_1:+64732646 | Msa0564150:CDS |
| CTTAATTGTTAGGCCTTGTG+CGG | 0.564584 | 4_1:-64732659 | None:intergenic |
| TAGCTGGGCCCATGTTATGG+GGG | 0.565629 | 4_1:+64739128 | Msa0564150:CDS |
| CCAATTGATATGCAAGGTTG+AGG | 0.574004 | 4_1:+64739554 | Msa0564150:CDS |
| TCAGATTTCATCAACTTATG+GGG | 0.579204 | 4_1:+64739165 | Msa0564150:CDS |
| CAGGTAACTCAATTTAAGTG+TGG | 0.580586 | 4_1:+64739087 | Msa0564150:intron |
| TCATTAGGGAGCTAGTTATG+TGG | 0.584575 | 4_1:-64739356 | None:intergenic |
| ATGAAATCTGAAGCTGAATG+TGG | 0.593595 | 4_1:-64739153 | None:intergenic |
| GTCGACCCGACCCTAATGGT+AGG | 0.594252 | 4_1:+64739508 | Msa0564150:CDS |
| TTTAAACGGGTTGACCCGGT+TGG | 0.594712 | 4_1:+64739285 | Msa0564150:CDS |
| AGAACCTGCAACAAAATGGA+AGG | 0.600774 | 4_1:-64732910 | None:intergenic |
| GGATCCAATGATCACCAACC+GGG | 0.601111 | 4_1:-64739299 | None:intergenic |
| TTCGTCAAGTGCAATGATTG+TGG | 0.601190 | 4_1:+64732766 | Msa0564150:CDS |
| CAATCATTGCACTTGACGAA+GGG | 0.602139 | 4_1:-64732763 | None:intergenic |
| GATTATTATTTCATCCCTTG+CGG | 0.605065 | 4_1:+64732712 | Msa0564150:CDS |
| TTACTACACACTTCAAGGGG+TGG | 0.606615 | 4_1:+64739794 | Msa0564150:CDS |
| CGACCCGACCCTAATGGTAG+GGG | 0.607530 | 4_1:+64739510 | Msa0564150:CDS |
| ACAATAAAGATTAAAGGTCA+CGG | 0.608904 | 4_1:+64740024 | Msa0564150:three_prime_UTR |
| GGTTTACTTCTTTGACTCTG+AGG | 0.609658 | 4_1:+64732636 | Msa0564150:CDS |
| ACGGATCTTGGAATGTTGAA+GGG | 0.614481 | 4_1:-64739219 | None:intergenic |
| ACAATCATTGCACTTGACGA+AGG | 0.615639 | 4_1:-64732764 | None:intergenic |
| TGTTTACTACACACTTCAAG+GGG | 0.616578 | 4_1:+64739791 | Msa0564150:CDS |
| TAGGGAGCTAGTTATGTGGA+AGG | 0.620633 | 4_1:-64739352 | None:intergenic |
| TGCATAGCCCGAGTTCGAGA+AGG | 0.625715 | 4_1:+64739459 | Msa0564150:CDS |
| GATACCATACACATTAAGCT+CGG | 0.633143 | 4_1:-64739916 | None:intergenic |
| GAAACGAGCAACTTGTAGGA+AGG | 0.635824 | 4_1:-64732853 | None:intergenic |
| AAATGACCAATTGATATGCA+AGG | 0.646231 | 4_1:+64739548 | Msa0564150:CDS |
| TTGTGGAGCAAGAACCATTG+AGG | 0.669130 | 4_1:+64732783 | Msa0564150:CDS |
| AACTTGCAAGAACAAATTTG+GGG | 0.669322 | 4_1:+64739381 | Msa0564150:CDS |
| GTCGGGTCGACAAACTGTCA+CGG | 0.691405 | 4_1:-64739496 | None:intergenic |
| TGAAATCTGAAGCTGAATGT+GGG | 0.702970 | 4_1:-64739152 | None:intergenic |
| AATTTGTTGAAAGATACAAG+AGG | 0.703489 | 4_1:-64732435 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAATTAAAATAAAAAT+AGG | - | chr4_1:64735475-64735494 | None:intergenic | 0.0% |
| !!! | ATAATAATAAATTTTTTTTA+AGG | - | chr4_1:64736898-64736917 | None:intergenic | 0.0% |
| !! | TATCATTAAATATTTGATTA+AGG | - | chr4_1:64732969-64732988 | None:intergenic | 10.0% |
| !! | ATTAAAAATATTAATTGATG+TGG | + | chr4_1:64733272-64733291 | Msa0564150:intron | 10.0% |
| !!! | CTCAAATTAAATTTTTAATT+TGG | + | chr4_1:64733995-64734014 | Msa0564150:intron | 10.0% |
| !!! | AATTAAATTTTTAATTTGGA+AGG | + | chr4_1:64733999-64734018 | Msa0564150:intron | 10.0% |
| !!! | TTTTTATTTTTATTTTACAG+AGG | - | chr4_1:64734036-64734055 | None:intergenic | 10.0% |
| !!! | TAAATATTTTTTACAAATTC+AGG | + | chr4_1:64734167-64734186 | Msa0564150:intron | 10.0% |
| !!! | AAATATTTTTTACAAATTCA+GGG | + | chr4_1:64734168-64734187 | Msa0564150:intron | 10.0% |
| !!! | AATCTATATTTTTTATTGAT+AGG | + | chr4_1:64734224-64734243 | Msa0564150:intron | 10.0% |
| !! | AATTTACTTAATTTATTATC+GGG | - | chr4_1:64735359-64735378 | None:intergenic | 10.0% |
| !!! | ATTTGATATGAAATTTTTTT+AGG | - | chr4_1:64735942-64735961 | None:intergenic | 10.0% |
| !!! | ACTTTTTAAAAGTTAAAAAA+TGG | + | chr4_1:64736367-64736386 | Msa0564150:intron | 10.0% |
| !! | TAATAAAAACTTACTATTAA+AGG | - | chr4_1:64736517-64736536 | None:intergenic | 10.0% |
| !!! | TATTTATATTTTCAAAATGT+TGG | + | chr4_1:64736758-64736777 | Msa0564150:intron | 10.0% |
| !! | AAATGAAGAAAATAAAAAAA+TGG | + | chr4_1:64736790-64736809 | Msa0564150:intron | 10.0% |
| !!! | TTAAATGATTTAATTTTTTC+AGG | + | chr4_1:64737019-64737038 | Msa0564150:intron | 10.0% |
| !!! | TTAAACATATTTTTTTTTGA+AGG | + | chr4_1:64737335-64737354 | Msa0564150:intron | 10.0% |
| !! | AAAATATTAAACATATTTAG+AGG | + | chr4_1:64737358-64737377 | Msa0564150:intron | 10.0% |
| !! | AAATATTAAACATATTTAGA+GGG | + | chr4_1:64737359-64737378 | Msa0564150:intron | 10.0% |
| !!! | TTTTTACTTAAATTTTGTTA+AGG | - | chr4_1:64738400-64738419 | None:intergenic | 10.0% |
| !! | ATAAAATAAAAACATTGAAA+TGG | - | chr4_1:64740051-64740070 | None:intergenic | 10.0% |
| !!! | CTTTTATTTTCTTAATTGTT+AGG | - | chr4_1:64732672-64732691 | None:intergenic | 15.0% |
| !! | AACAATTAAGAAAATAAAAG+AGG | + | chr4_1:64732672-64732691 | Msa0564150:CDS | 15.0% |
| !!! | GTAATTTTAAATGTTTTGAT+TGG | + | chr4_1:64733294-64733313 | Msa0564150:intron | 15.0% |
| !!! | CATATTTTAAGCTAAAATAT+TGG | - | chr4_1:64733550-64733569 | None:intergenic | 15.0% |
| !!! | CAATATTTTAGCTTAAAATA+TGG | + | chr4_1:64733548-64733567 | Msa0564150:intron | 15.0% |
| !!! | CAATACATTGATTTTTTTTT+TGG | - | chr4_1:64734850-64734869 | None:intergenic | 15.0% |
| !! | AGAATTCTTAAAAATTGTTT+CGG | + | chr4_1:64734913-64734932 | Msa0564150:intron | 15.0% |
| !!! | GTTGAATTGAATTTTAAATT+AGG | - | chr4_1:64735042-64735061 | None:intergenic | 15.0% |
| !! | ATAAAAATAGGTTATTATTG+AGG | - | chr4_1:64735463-64735482 | None:intergenic | 15.0% |
| !! | AACACTTTAATTAATATGAA+TGG | + | chr4_1:64736091-64736110 | Msa0564150:intron | 15.0% |
| !! | AGTGATTAATTTCTAAATTT+AGG | - | chr4_1:64736597-64736616 | None:intergenic | 15.0% |
| !! | TTAATAAAACTTACTATTAC+AGG | + | chr4_1:64736663-64736682 | Msa0564150:intron | 15.0% |
| !!! | TATTTTAGATGCTTTTTATT+TGG | + | chr4_1:64737941-64737960 | Msa0564150:intron | 15.0% |
| !!! | TTTTGATTAGTTTTTATAGA+AGG | + | chr4_1:64738768-64738787 | Msa0564150:intron | 15.0% |
| !!! | TTTGATTAGTTTTTATAGAA+GGG | + | chr4_1:64738769-64738788 | Msa0564150:intron | 15.0% |
| !! | TTAAAGACAATAAAGATTAA+AGG | + | chr4_1:64740018-64740037 | Msa0564150:three_prime_UTR | 15.0% |
| !! | TTATTAGAGTTTAATAGTAG+TGG | + | chr4_1:64733188-64733207 | Msa0564150:intron | 20.0% |
| !! | TATTAGAGTTTAATAGTAGT+GGG | + | chr4_1:64733189-64733208 | Msa0564150:intron | 20.0% |
| !! | GCTTAATAATAAGAGTTTAA+TGG | - | chr4_1:64733358-64733377 | None:intergenic | 20.0% |
| !!! | TTTTAACCAAAATTCACTTT+TGG | - | chr4_1:64733390-64733409 | None:intergenic | 20.0% |
| !!! | TATTTTAGCTTAAAATATGG+AGG | + | chr4_1:64733551-64733570 | Msa0564150:intron | 20.0% |
| !!! | ATTTTAGCTTAAAATATGGA+GGG | + | chr4_1:64733552-64733571 | Msa0564150:intron | 20.0% |
| !!! | ATTTGAAAATCTGATAGTTT+TGG | - | chr4_1:64733579-64733598 | None:intergenic | 20.0% |
| !! | CTGAAAATAGTTTATGTAAA+TGG | - | chr4_1:64734107-64734126 | None:intergenic | 20.0% |
| !!! | TTTTTGTTTATAATAGTGAC+CGG | + | chr4_1:64734598-64734617 | Msa0564150:intron | 20.0% |
| !!! | TTTTTTTGGTTACATTAAAG+AGG | - | chr4_1:64734836-64734855 | None:intergenic | 20.0% |
| !!! | CACTTTTAAACTCTAAATTT+TGG | - | chr4_1:64735104-64735123 | None:intergenic | 20.0% |
| !!! | CAAAATTTAGAGTTTAAAAG+TGG | + | chr4_1:64735102-64735121 | Msa0564150:intron | 20.0% |
| !!! | TTTTACTACCCATTATTATA+TGG | + | chr4_1:64735288-64735307 | Msa0564150:intron | 20.0% |
| !! | CATATCTTATTACTTAAAGT+TGG | + | chr4_1:64735399-64735418 | Msa0564150:intron | 20.0% |
| !!! | ATGATTTATGAAATTTTGAG+TGG | + | chr4_1:64735586-64735605 | Msa0564150:intron | 20.0% |
| !! | TAAATAAATTCAAAACGTCA+TGG | + | chr4_1:64735678-64735697 | Msa0564150:intron | 20.0% |
| !! | AAATAAATTCAAAACGTCAT+GGG | + | chr4_1:64735679-64735698 | Msa0564150:intron | 20.0% |
| !! | AAAATTCCATAACTACAATT+AGG | - | chr4_1:64735880-64735899 | None:intergenic | 20.0% |
| !!! | TTGTAGTTATGGAATTTTAT+TGG | + | chr4_1:64735882-64735901 | Msa0564150:intron | 20.0% |
| !! | AAGAAAATAAAAAAATGGAG+AGG | + | chr4_1:64736795-64736814 | Msa0564150:intron | 20.0% |
| !! | ATTTAAACCTTGATAAATGT+GGG | - | chr4_1:64736848-64736867 | None:intergenic | 20.0% |
| !! | AATTTAAACCTTGATAAATG+TGG | - | chr4_1:64736849-64736868 | None:intergenic | 20.0% |
| !!! | GCATCTCAATTTTTTTTAAA+AGG | - | chr4_1:64736930-64736949 | None:intergenic | 20.0% |
| !! | TTGAAACTAGAAGAAAATTA+TGG | - | chr4_1:64737107-64737126 | None:intergenic | 20.0% |
| !! | TACTGTATAATTGAATTAGA+TGG | + | chr4_1:64737592-64737611 | Msa0564150:intron | 20.0% |
| !! | ACAATAAATATCAAAGACTT+AGG | - | chr4_1:64737902-64737921 | None:intergenic | 20.0% |
| !! | AGTGTTAAAAAAGACAAAAA+TGG | - | chr4_1:64738238-64738257 | None:intergenic | 20.0% |
| !!! | TACTTAAATTTTGTTAAGGA+GGG | - | chr4_1:64738396-64738415 | None:intergenic | 20.0% |
| !!! | TTACTTAAATTTTGTTAAGG+AGG | - | chr4_1:64738397-64738416 | None:intergenic | 20.0% |
| !! | ATACAAAAACTGTATTGTAT+TGG | + | chr4_1:64738875-64738894 | Msa0564150:intron | 20.0% |
| !!! | TTGAGTACTTATATTCTTTT+AGG | + | chr4_1:64738908-64738927 | Msa0564150:intron | 20.0% |
| !! | AAACTTTATGTGCAATAATT+TGG | + | chr4_1:64739433-64739452 | Msa0564150:CDS | 20.0% |
| !! | TGATGAAAGAAATCAAATTA+TGG | + | chr4_1:64739647-64739666 | Msa0564150:CDS | 20.0% |
| !! | ATATAGTAGAAAAAGATCAA+GGG | + | chr4_1:64739670-64739689 | Msa0564150:CDS | 20.0% |
| !! | TGTGTATGACTTAAAATTAA+AGG | + | chr4_1:64739752-64739771 | Msa0564150:CDS | 20.0% |
| !! | GTGTATGACTTAAAATTAAA+GGG | + | chr4_1:64739753-64739772 | Msa0564150:CDS | 20.0% |
| !!! | AATTTGTTGAAAGATACAAG+AGG | - | chr4_1:64732438-64732457 | None:intergenic | 25.0% |
| ! | GGTTATTAAGCTTATAAGAA+AGG | - | chr4_1:64732467-64732486 | None:intergenic | 25.0% |
| ! | AAGCTTAATAACCACTAATA+TGG | + | chr4_1:64732474-64732493 | Msa0564150:exon | 25.0% |
| !! | TTTAAGATAGTGAAGTTTCA+TGG | - | chr4_1:64732614-64732633 | None:intergenic | 25.0% |
| ! | ATAATTAATATCACTCCCTA+AGG | - | chr4_1:64733172-64733191 | None:intergenic | 25.0% |
| !! | TTATACGTGCAAAATTGTTT+TGG | - | chr4_1:64733223-64733242 | None:intergenic | 25.0% |
| !! | TTTTCTCCAAAAGTGAATTT+TGG | + | chr4_1:64733381-64733400 | Msa0564150:intron | 25.0% |
| !!! | ATGTTACCATTTTGTTGATT+TGG | - | chr4_1:64733609-64733628 | None:intergenic | 25.0% |
| ! | AATCAACAAAATGGTAACAT+TGG | + | chr4_1:64733609-64733628 | Msa0564150:intron | 25.0% |
| !!! | AGGTTTACACAATGTTTTTT+TGG | - | chr4_1:64733807-64733826 | None:intergenic | 25.0% |
| ! | TAATGAATTCAAAGTTACAG+AGG | - | chr4_1:64734076-64734095 | None:intergenic | 25.0% |
| !!! | AGACATTTTAACACTTTACA+AGG | + | chr4_1:64734125-64734144 | Msa0564150:intron | 25.0% |
| !! | ATAAATGAGATTGATTTCGA+CGG | + | chr4_1:64734313-64734332 | Msa0564150:intron | 25.0% |
| !! | CTTTTGCTTATAATAGTGAT+CGG | - | chr4_1:64734490-64734509 | None:intergenic | 25.0% |
| ! | CATTCAATAAATGATGTATG+TGG | - | chr4_1:64734563-64734582 | None:intergenic | 25.0% |
| !!! | AATGGATTGGGAAAATAATT+GGG | - | chr4_1:64734668-64734687 | None:intergenic | 25.0% |
| !!! | AAATGGATTGGGAAAATAAT+TGG | - | chr4_1:64734669-64734688 | None:intergenic | 25.0% |
| !! | CATAAAATGTGAAATGGATT+GGG | - | chr4_1:64734680-64734699 | None:intergenic | 25.0% |
| ! | TAAAGTTCTTAAAAGATGTC+TGG | - | chr4_1:64734755-64734774 | None:intergenic | 25.0% |
| !!! | AACAGTTAATTTGTTGAACT+TGG | + | chr4_1:64735059-64735078 | Msa0564150:intron | 25.0% |
| ! | CTTAATTTATTATCGGGTAT+GGG | - | chr4_1:64735353-64735372 | None:intergenic | 25.0% |
| ! | ACTTAATTTATTATCGGGTA+TGG | - | chr4_1:64735354-64735373 | None:intergenic | 25.0% |
| !!! | ATTATTGAGGATTTTTAGGT+GGG | - | chr4_1:64735450-64735469 | None:intergenic | 25.0% |
| !!! | TATTATTGAGGATTTTTAGG+TGG | - | chr4_1:64735451-64735470 | None:intergenic | 25.0% |
| !! | GGTTATTATTGAGGATTTTT+AGG | - | chr4_1:64735454-64735473 | None:intergenic | 25.0% |
| !!! | AATTTTGAGTGGATTATGTA+TGG | + | chr4_1:64735597-64735616 | Msa0564150:intron | 25.0% |
| ! | ATATCGTCAAAATATATGCA+AGG | - | chr4_1:64735856-64735875 | None:intergenic | 25.0% |
| ! | GATATTCCTAATTGTAGTTA+TGG | + | chr4_1:64735871-64735890 | Msa0564150:intron | 25.0% |
| ! | GGGAACTATTAATAAGAAAT+TGG | - | chr4_1:64736024-64736043 | None:intergenic | 25.0% |
| ! | ATTCTATGATGACAAATTGT+TGG | - | chr4_1:64736161-64736180 | None:intergenic | 25.0% |
| ! | AATAGTCTCACCAAATTAAA+TGG | + | chr4_1:64736183-64736202 | Msa0564150:intron | 25.0% |
| !!! | AAAATACTAAGAGTGTCTTT+AGG | + | chr4_1:64736280-64736299 | Msa0564150:intron | 25.0% |
| !!! | AAATACTAAGAGTGTCTTTA+GGG | + | chr4_1:64736281-64736300 | Msa0564150:intron | 25.0% |
| ! | AGAAGACATACATAAAAATG+TGG | + | chr4_1:64736313-64736332 | Msa0564150:intron | 25.0% |
| ! | AAAAATGTGGTATTGTGAAA+TGG | + | chr4_1:64736326-64736345 | Msa0564150:intron | 25.0% |
| !! | CATTTCCCTTTAGTTTAAAA+GGG | - | chr4_1:64736462-64736481 | None:intergenic | 25.0% |
| !! | ACATTTCCCTTTAGTTTAAA+AGG | - | chr4_1:64736463-64736482 | None:intergenic | 25.0% |
| ! | AAATGTTAACGAGTATCTTT+GGG | + | chr4_1:64736477-64736496 | Msa0564150:intron | 25.0% |
| ! | TTGAAAACACTCATTAACAA+AGG | - | chr4_1:64736559-64736578 | None:intergenic | 25.0% |
| ! | AATGTTAACAAGTTCTTTCT+GGG | - | chr4_1:64736702-64736721 | None:intergenic | 25.0% |
| ! | AAATGTTAACAAGTTCTTTC+TGG | - | chr4_1:64736703-64736722 | None:intergenic | 25.0% |
| ! | TACAATAATGTGATACTTGA+TGG | - | chr4_1:64736740-64736759 | None:intergenic | 25.0% |
| !!! | ATTATGGCAGTTTTTAAAAC+AGG | - | chr4_1:64737091-64737110 | None:intergenic | 25.0% |
| ! | AACTAGGAACAAAATATTGT+CGG | + | chr4_1:64737144-64737163 | Msa0564150:intron | 25.0% |
| ! | AGCAAAATTTCAACAAAGTT+TGG | - | chr4_1:64737213-64737232 | None:intergenic | 25.0% |
| ! | AGAAATTTAAAGAATCTCAG+TGG | - | chr4_1:64737264-64737283 | None:intergenic | 25.0% |
| ! | AGCATTTCTCATATATGAAT+AGG | + | chr4_1:64737388-64737407 | Msa0564150:intron | 25.0% |
| ! | TAATTGCCCTCAAATTTAAA+CGG | + | chr4_1:64737772-64737791 | Msa0564150:intron | 25.0% |
| ! | AAAAAGACAAAAATGGCAAT+GGG | - | chr4_1:64738231-64738250 | None:intergenic | 25.0% |
| ! | AAAAAAGACAAAAATGGCAA+TGG | - | chr4_1:64738232-64738251 | None:intergenic | 25.0% |
| ! | ATTAGATTGAAGAAAATACG+TGG | + | chr4_1:64738634-64738653 | Msa0564150:intron | 25.0% |
| ! | TGAACCATCAATTAATGTTA+GGG | + | chr4_1:64738724-64738743 | Msa0564150:intron | 25.0% |
| ! | TTCAGATTTCATCAACTTAT+GGG | + | chr4_1:64739164-64739183 | Msa0564150:CDS | 25.0% |
| ! | ATTGCACATAAAGTTTCAAA+TGG | - | chr4_1:64739429-64739448 | None:intergenic | 25.0% |
| !!! | TGACACTAGTTTGAAAATTT+TGG | + | chr4_1:64739599-64739618 | Msa0564150:CDS | 25.0% |
| ! | GATATAGTAGAAAAAGATCA+AGG | + | chr4_1:64739669-64739688 | Msa0564150:CDS | 25.0% |
| ! | TATAGTAGAAAAAGATCAAG+GGG | + | chr4_1:64739671-64739690 | Msa0564150:CDS | 25.0% |
| ! | TAAGTCAAGAAATGTCAAAT+TGG | - | chr4_1:64739721-64739740 | None:intergenic | 25.0% |
| ! | ACAATAAAGATTAAAGGTCA+CGG | + | chr4_1:64740024-64740043 | Msa0564150:three_prime_UTR | 25.0% |
| !! | ATTTGAGAGTATCTTCAGTT+GGG | + | chr4_1:64732533-64732552 | Msa0564150:CDS | 30.0% |
| GAAACTTCACTATCTTAAAG+TGG | + | chr4_1:64732615-64732634 | Msa0564150:CDS | 30.0% | |
| GATTATTATTTCATCCCTTG+CGG | + | chr4_1:64732712-64732731 | Msa0564150:CDS | 30.0% | |
| GAAGGAGAAAATGATAATTC+TGG | - | chr4_1:64732895-64732914 | None:intergenic | 30.0% | |
| TTAAAGAACCTGCAACAAAA+TGG | - | chr4_1:64732917-64732936 | None:intergenic | 30.0% | |
| TAGAGAGATGCATATGTATT+AGG | - | chr4_1:64732996-64733015 | None:intergenic | 30.0% | |
| AGAAGACCAAATCAACAAAA+TGG | + | chr4_1:64733600-64733619 | Msa0564150:intron | 30.0% | |
| !!! | CCTTTCACTCTCATTTTTTA+TGG | - | chr4_1:64733955-64733974 | None:intergenic | 30.0% |
| CCATAAAAAATGAGAGTGAA+AGG | + | chr4_1:64733952-64733971 | Msa0564150:intron | 30.0% | |
| AGAGTGAAAGGAAAGTTAAA+AGG | + | chr4_1:64733964-64733983 | Msa0564150:intron | 30.0% | |
| GAGTGAAAGGAAAGTTAAAA+GGG | + | chr4_1:64733965-64733984 | Msa0564150:intron | 30.0% | |
| ATAGACTCTGTAATTTGAGT+GGG | - | chr4_1:64734264-64734283 | None:intergenic | 30.0% | |
| AATAGACTCTGTAATTTGAG+TGG | - | chr4_1:64734265-64734284 | None:intergenic | 30.0% | |
| TTACACTCTTATTAACCGAA+GGG | - | chr4_1:64734380-64734399 | None:intergenic | 30.0% | |
| ATTACACTCTTATTAACCGA+AGG | - | chr4_1:64734381-64734400 | None:intergenic | 30.0% | |
| AATAAATGATTTACTCCCTC+CGG | - | chr4_1:64734620-64734639 | None:intergenic | 30.0% | |
| ! | AGTAAATCATTTATTGGCCT+TGG | + | chr4_1:64734625-64734644 | Msa0564150:intron | 30.0% |
| CCATAAAATGTGAAATGGAT+TGG | - | chr4_1:64734681-64734700 | None:intergenic | 30.0% | |
| ! | CCAATCCATTTCACATTTTA+TGG | + | chr4_1:64734678-64734697 | Msa0564150:intron | 30.0% |
| CTCTACCATAAAATGTGAAA+TGG | - | chr4_1:64734686-64734705 | None:intergenic | 30.0% | |
| TGTAGTACGTAGTACTATAA+TGG | - | chr4_1:64734980-64734999 | None:intergenic | 30.0% | |
| !!! | GACGATATTCCTTTTTTTTG+TGG | + | chr4_1:64735136-64735155 | Msa0564150:intron | 30.0% |
| !!! | GATATTCCTTTTTTTTGTGG+TGG | + | chr4_1:64735139-64735158 | Msa0564150:intron | 30.0% |
| GTCTGTGTCCATATAATAAT+GGG | - | chr4_1:64735299-64735318 | None:intergenic | 30.0% | |
| TGTCTGTGTCCATATAATAA+TGG | - | chr4_1:64735300-64735319 | None:intergenic | 30.0% | |
| TTATTATATGGACACAGACA+CGG | + | chr4_1:64735300-64735319 | Msa0564150:intron | 30.0% | |
| ! | GTTTTATGATGTGAATGAAG+TGG | - | chr4_1:64735524-64735543 | None:intergenic | 30.0% |
| CGGATATCATATTTATCCAA+CGG | + | chr4_1:64735770-64735789 | Msa0564150:intron | 30.0% | |
| GGATATCATATTTATCCAAC+GGG | + | chr4_1:64735771-64735790 | Msa0564150:intron | 30.0% | |
| GATATCATATTTATCCAACG+GGG | + | chr4_1:64735772-64735791 | Msa0564150:intron | 30.0% | |
| AAGAAATTGGTTGCAAATAC+CGG | - | chr4_1:64736011-64736030 | None:intergenic | 30.0% | |
| TGGACTTACTTAATTGGATA+GGG | - | chr4_1:64736046-64736065 | None:intergenic | 30.0% | |
| AAAAGTAGTAGTGAGTAGTT+AGG | - | chr4_1:64736069-64736088 | None:intergenic | 30.0% | |
| TACATGACTTCTGTATGATT+TGG | - | chr4_1:64736123-64736142 | None:intergenic | 30.0% | |
| GGGTACTATACCATTTAATT+TGG | - | chr4_1:64736196-64736215 | None:intergenic | 30.0% | |
| GAAAGAAACTCCTAACTTTA+AGG | - | chr4_1:64736222-64736241 | None:intergenic | 30.0% | |
| TTGTAGTAAAGTAGAGAACA+TGG | - | chr4_1:64736244-64736263 | None:intergenic | 30.0% | |
| TGTGAAATGGTTAAAAGTGA+TGG | + | chr4_1:64736339-64736358 | Msa0564150:intron | 30.0% | |
| ! | CAAGACCCTTTTAAACTAAA+GGG | + | chr4_1:64736454-64736473 | Msa0564150:intron | 30.0% |
| GAAATGTTAACGAGTATCTT+TGG | + | chr4_1:64736476-64736495 | Msa0564150:intron | 30.0% | |
| CTAGTTTAGTTGCTATAACA+TGG | - | chr4_1:64737130-64737149 | None:intergenic | 30.0% | |
| CATGTTATAGCAACTAAACT+AGG | + | chr4_1:64737128-64737147 | Msa0564150:intron | 30.0% | |
| !! | TAATTATCCCAATTTGTTGC+TGG | + | chr4_1:64737171-64737190 | Msa0564150:intron | 30.0% |
| CATCTCTCATAAAAATGACA+AGG | - | chr4_1:64737497-64737516 | None:intergenic | 30.0% | |
| AGATGTACTGTACATAAGTA+CGG | - | chr4_1:64737647-64737666 | None:intergenic | 30.0% | |
| AATTGCCCTCAAATTTAAAC+GGG | + | chr4_1:64737773-64737792 | Msa0564150:intron | 30.0% | |
| GTATAGTCTATATAATGTGC+GGG | - | chr4_1:64737843-64737862 | None:intergenic | 30.0% | |
| CGTATAGTCTATATAATGTG+CGG | - | chr4_1:64737844-64737863 | None:intergenic | 30.0% | |
| ! | ATCTTTTTCTTGTGAAAGTG+CGG | + | chr4_1:64738055-64738074 | Msa0564150:intron | 30.0% |
| ! | ATGGGGATTTTCTTAAAACA+CGG | + | chr4_1:64738166-64738185 | Msa0564150:intron | 30.0% |
| CACAAAAAGACAAAAAAGAG+AGG | - | chr4_1:64738297-64738316 | None:intergenic | 30.0% | |
| !! | TAAGAAAACTGAAAAGTGTC+AGG | - | chr4_1:64738359-64738378 | None:intergenic | 30.0% |
| GTGAACCATCAATTAATGTT+AGG | + | chr4_1:64738723-64738742 | Msa0564150:intron | 30.0% | |
| CTTTCCCTAACATTAATTGA+TGG | - | chr4_1:64738731-64738750 | None:intergenic | 30.0% | |
| TTTCACGAATATTCAATGCA+TGG | - | chr4_1:64739043-64739062 | None:intergenic | 30.0% | |
| TAACTCAATTTAAGTGTGGT+GGG | + | chr4_1:64739091-64739110 | Msa0564150:CDS | 30.0% | |
| CTTCAGATTTCATCAACTTA+TGG | + | chr4_1:64739163-64739182 | Msa0564150:CDS | 30.0% | |
| TCAGATTTCATCAACTTATG+GGG | + | chr4_1:64739165-64739184 | Msa0564150:CDS | 30.0% | |
| ! | TTTTAGGCTCAAATTGTTCA+AGG | - | chr4_1:64739196-64739215 | None:intergenic | 30.0% |
| ! | TTTTCGGATCCAAAATTAAG+GGG | - | chr4_1:64739252-64739271 | None:intergenic | 30.0% |
| ! | CTTTTCGGATCCAAAATTAA+GGG | - | chr4_1:64739253-64739272 | None:intergenic | 30.0% |
| !!! | TGTGTCCATTTTTTTGTTGT+TGG | - | chr4_1:64739328-64739347 | None:intergenic | 30.0% |
| TTCTTGCAAGTTGTTCATTA+GGG | - | chr4_1:64739373-64739392 | None:intergenic | 30.0% | |
| ACAACTTGCAAGAACAAATT+TGG | + | chr4_1:64739379-64739398 | Msa0564150:CDS | 30.0% | |
| CAACTTGCAAGAACAAATTT+GGG | + | chr4_1:64739380-64739399 | Msa0564150:CDS | 30.0% | |
| AACTTGCAAGAACAAATTTG+GGG | + | chr4_1:64739381-64739400 | Msa0564150:CDS | 30.0% | |
| ACATAAAGTTTCAAATGGAG+GGG | - | chr4_1:64739424-64739443 | None:intergenic | 30.0% | |
| CACATAAAGTTTCAAATGGA+GGG | - | chr4_1:64739425-64739444 | None:intergenic | 30.0% | |
| AAATGACCAATTGATATGCA+AGG | + | chr4_1:64739548-64739567 | Msa0564150:CDS | 30.0% | |
| !!! | GTGACTGATTTTTTTGTCTA+TGG | + | chr4_1:64739693-64739712 | Msa0564150:CDS | 30.0% |
| AGTGTGTAGTAAACAAATCT+TGG | - | chr4_1:64739786-64739805 | None:intergenic | 30.0% | |
| TTTGTTTACTACACACTTCA+AGG | + | chr4_1:64739789-64739808 | Msa0564150:CDS | 30.0% | |
| TTGTTTACTACACACTTCAA+GGG | + | chr4_1:64739790-64739809 | Msa0564150:CDS | 30.0% | |
| TTCATCTTCTGGCAATATAA+TGG | - | chr4_1:64739880-64739899 | None:intergenic | 30.0% | |
| TATATTGCCAGAAGATGAAA+TGG | + | chr4_1:64739881-64739900 | Msa0564150:CDS | 30.0% | |
| ! | AGTTTTACCATTTCATCTTC+TGG | - | chr4_1:64739891-64739910 | None:intergenic | 30.0% |
| ! | TGAGGGTGATTTTTAATGAT+TGG | + | chr4_1:64739944-64739963 | Msa0564150:exon | 30.0% |
| TTGTGGGAAAACCATATTAG+TGG | - | chr4_1:64732488-64732507 | None:intergenic | 35.0% | |
| !! | GATTTGAGAGTATCTTCAGT+TGG | + | chr4_1:64732532-64732551 | Msa0564150:CDS | 35.0% |
| ! | GATGTTTTTCACAATCCGAA+TGG | + | chr4_1:64732577-64732596 | Msa0564150:CDS | 35.0% |
| ! | TTTTCACAATCCGAATGGTT+TGG | + | chr4_1:64732582-64732601 | Msa0564150:CDS | 35.0% |
| !! | ATCTAGAGTTTTGGTGCAAT+TGG | - | chr4_1:64732809-64732828 | None:intergenic | 35.0% |
| !! | AAGCCATTCATCTAGAGTTT+TGG | - | chr4_1:64732818-64732837 | None:intergenic | 35.0% |
| TCGTTTCTCAACAAGTCATT+GGG | + | chr4_1:64732869-64732888 | Msa0564150:CDS | 35.0% | |
| ! | AAGCCTGTAACCAATTTGTT+AGG | + | chr4_1:64733664-64733683 | Msa0564150:intron | 35.0% |
| TGACCTAACAAATTGGTTAC+AGG | - | chr4_1:64733670-64733689 | None:intergenic | 35.0% | |
| GTTAGCATGACCTAACAAAT+TGG | - | chr4_1:64733677-64733696 | None:intergenic | 35.0% | |
| AACTAACTTCGTCGTCTTTA+AGG | + | chr4_1:64733705-64733724 | Msa0564150:intron | 35.0% | |
| !!! | CACAATGTTTTTTTGGTCAC+AGG | - | chr4_1:64733800-64733819 | None:intergenic | 35.0% |
| AACCTAAAGCCTGTAATGTA+AGG | + | chr4_1:64733822-64733841 | Msa0564150:intron | 35.0% | |
| TTCCTTACATTACAGGCTTT+AGG | - | chr4_1:64733827-64733846 | None:intergenic | 35.0% | |
| AAGCCTGTAATGTAAGGAAT+TGG | + | chr4_1:64733828-64733847 | Msa0564150:intron | 35.0% | |
| ACTGTCACATAAAGATTGAG+AGG | + | chr4_1:64733852-64733871 | Msa0564150:intron | 35.0% | |
| ! | TAAAGATTGAGAGGTGTAGT+TGG | + | chr4_1:64733861-64733880 | Msa0564150:intron | 35.0% |
| TAGACTCTGTAATTTGAGTG+GGG | - | chr4_1:64734263-64734282 | None:intergenic | 35.0% | |
| TACACTCTTATTAACCGAAG+GGG | - | chr4_1:64734379-64734398 | None:intergenic | 35.0% | |
| TGCTTATAATAGTGATCGGA+GGG | - | chr4_1:64734486-64734505 | None:intergenic | 35.0% | |
| TTGCTTATAATAGTGATCGG+AGG | - | chr4_1:64734487-64734506 | None:intergenic | 35.0% | |
| TTGTTTATAATAGTGACCGG+AGG | + | chr4_1:64734601-64734620 | Msa0564150:intron | 35.0% | |
| TGTTTATAATAGTGACCGGA+GGG | + | chr4_1:64734602-64734621 | Msa0564150:intron | 35.0% | |
| GGAGGGAGTAAATCATTTAT+TGG | + | chr4_1:64734619-64734638 | Msa0564150:intron | 35.0% | |
| !! | AAAATAATTGGGTTGACGGT+CGG | - | chr4_1:64734657-64734676 | None:intergenic | 35.0% |
| !! | TGGGAAAATAATTGGGTTGA+CGG | - | chr4_1:64734661-64734680 | None:intergenic | 35.0% |
| GTACGTAGTACTATAATGGT+AGG | - | chr4_1:64734976-64734995 | None:intergenic | 35.0% | |
| TGATGTGAATGAAGTGGAAA+CGG | - | chr4_1:64735518-64735537 | None:intergenic | 35.0% | |
| TATCATATTATCCGTACCCA+TGG | + | chr4_1:64735805-64735824 | Msa0564150:intron | 35.0% | |
| ATCATATTATCCGTACCCAT+GGG | + | chr4_1:64735806-64735825 | Msa0564150:intron | 35.0% | |
| TCAAAATATATGCAAGGTCC+GGG | - | chr4_1:64735850-64735869 | None:intergenic | 35.0% | |
| GTCAAAATATATGCAAGGTC+CGG | - | chr4_1:64735851-64735870 | None:intergenic | 35.0% | |
| GACTTACTTAATTGGATAGG+GGG | - | chr4_1:64736044-64736063 | None:intergenic | 35.0% | |
| GGACTTACTTAATTGGATAG+GGG | - | chr4_1:64736045-64736064 | None:intergenic | 35.0% | |
| GTGGACTTACTTAATTGGAT+AGG | - | chr4_1:64736047-64736066 | None:intergenic | 35.0% | |
| ! | GTTAGGTGGACTTACTTAAT+TGG | - | chr4_1:64736052-64736071 | None:intergenic | 35.0% |
| ! | TGACTTCTGTATGATTTGGA+AGG | - | chr4_1:64736119-64736138 | None:intergenic | 35.0% |
| GAAGTCATGTACAGTGTTTA+TGG | + | chr4_1:64736132-64736151 | Msa0564150:intron | 35.0% | |
| ! | AACTCCTAACTTTAAGGAGA+GGG | - | chr4_1:64736216-64736235 | None:intergenic | 35.0% |
| ! | AAACTCCTAACTTTAAGGAG+AGG | - | chr4_1:64736217-64736236 | None:intergenic | 35.0% |
| TTTACTTAACTAGTGCTCCA+AGG | + | chr4_1:64736420-64736439 | Msa0564150:intron | 35.0% | |
| TTACTTAACTAGTGCTCCAA+GGG | + | chr4_1:64736421-64736440 | Msa0564150:intron | 35.0% | |
| ! | GCAAGACCCTTTTAAACTAA+AGG | + | chr4_1:64736453-64736472 | Msa0564150:intron | 35.0% |
| AACAAAGTTTGGACATGAGA+TGG | - | chr4_1:64737202-64737221 | None:intergenic | 35.0% | |
| TGTACAGTACATCTTATCCT+AGG | + | chr4_1:64737653-64737672 | Msa0564150:intron | 35.0% | |
| GTACAGTACATCTTATCCTA+GGG | + | chr4_1:64737654-64737673 | Msa0564150:intron | 35.0% | |
| CCATACCCGTTTAAATTTGA+GGG | - | chr4_1:64737781-64737800 | None:intergenic | 35.0% | |
| CCTCAAATTTAAACGGGTAT+GGG | + | chr4_1:64737779-64737798 | Msa0564150:intron | 35.0% | |
| !! | TCTTTTTCTTGTGAAAGTGC+GGG | + | chr4_1:64738056-64738075 | Msa0564150:intron | 35.0% |
| ! | TGGGGATTTTCTTAAAACAC+GGG | + | chr4_1:64738167-64738186 | Msa0564150:intron | 35.0% |
| TTTCTTAAAACACGGGTATG+TGG | + | chr4_1:64738174-64738193 | Msa0564150:intron | 35.0% | |
| CAAAAAAGAGAGGATAAGTC+TGG | - | chr4_1:64738287-64738306 | None:intergenic | 35.0% | |
| !!! | AACTGAAAAGTGTCAGGTTT+TGG | - | chr4_1:64738353-64738372 | None:intergenic | 35.0% |
| ATTGAAGAAAATACGTGGTG+TGG | + | chr4_1:64738639-64738658 | Msa0564150:intron | 35.0% | |
| !! | CTTATCTCTAGTCTTGTGAA+AGG | - | chr4_1:64738674-64738693 | None:intergenic | 35.0% |
| ACGTAGTACTCTATAACTGA+AGG | - | chr4_1:64738837-64738856 | None:intergenic | 35.0% | |
| !! | GAAAAGCATTCATAAGTCGT+TGG | + | chr4_1:64739059-64739078 | Msa0564150:intron | 35.0% |
| CAGGTAACTCAATTTAAGTG+TGG | + | chr4_1:64739087-64739106 | Msa0564150:intron | 35.0% | |
| GTAACTCAATTTAAGTGTGG+TGG | + | chr4_1:64739090-64739109 | Msa0564150:CDS | 35.0% | |
| ! | TGAAATCTGAAGCTGAATGT+GGG | - | chr4_1:64739155-64739174 | None:intergenic | 35.0% |
| ! | ATGAAATCTGAAGCTGAATG+TGG | - | chr4_1:64739156-64739175 | None:intergenic | 35.0% |
| !! | AAAATTAAGGGGTGTTGAGA+CGG | - | chr4_1:64739241-64739260 | None:intergenic | 35.0% |
| ! | CCTTTTCGGATCCAAAATTA+AGG | - | chr4_1:64739254-64739273 | None:intergenic | 35.0% |
| ! | CCTTAATTTTGGATCCGAAA+AGG | + | chr4_1:64739251-64739270 | Msa0564150:CDS | 35.0% |
| !! | AAATGTAGCTGGTTCCTTTT+CGG | - | chr4_1:64739268-64739287 | None:intergenic | 35.0% |
| AGGAACCAGCTACATTTAAA+CGG | + | chr4_1:64739271-64739290 | Msa0564150:CDS | 35.0% | |
| !!! | CCATTTTTTTGTTGTTGGCT+GGG | - | chr4_1:64739323-64739342 | None:intergenic | 35.0% |
| !!! | TCCATTTTTTTGTTGTTGGC+TGG | - | chr4_1:64739324-64739343 | None:intergenic | 35.0% |
| GTTCTTGCAAGTTGTTCATT+AGG | - | chr4_1:64739374-64739393 | None:intergenic | 35.0% | |
| GCACATAAAGTTTCAAATGG+AGG | - | chr4_1:64739426-64739445 | None:intergenic | 35.0% | |
| TGTTTACTACACACTTCAAG+GGG | + | chr4_1:64739791-64739810 | Msa0564150:CDS | 35.0% | |
| CCATCAATATCATTCACCTT+AGG | - | chr4_1:64739846-64739865 | None:intergenic | 35.0% | |
| CCTAAGGTGAATGATATTGA+TGG | + | chr4_1:64739843-64739862 | Msa0564150:CDS | 35.0% | |
| AAATCCGAGCTTAATGTGTA+TGG | + | chr4_1:64739912-64739931 | Msa0564150:CDS | 35.0% | |
| GATACCATACACATTAAGCT+CGG | - | chr4_1:64739919-64739938 | None:intergenic | 35.0% | |
| TGTGTATGGTATCATGTTTG+AGG | + | chr4_1:64739926-64739945 | Msa0564150:CDS | 35.0% | |
| GTGTATGGTATCATGTTTGA+GGG | + | chr4_1:64739927-64739946 | Msa0564150:CDS | 35.0% | |
| AGCTCTCTTTCTCTTCTTGT+GGG | - | chr4_1:64732504-64732523 | None:intergenic | 40.0% | |
| AAGCTCTCTTTCTCTTCTTG+TGG | - | chr4_1:64732505-64732524 | None:intergenic | 40.0% | |
| GGTTTACTTCTTTGACTCTG+AGG | + | chr4_1:64732636-64732655 | Msa0564150:CDS | 40.0% | |
| ! | CTTAATTGTTAGGCCTTGTG+CGG | - | chr4_1:64732662-64732681 | None:intergenic | 40.0% |
| CAATCATTGCACTTGACGAA+GGG | - | chr4_1:64732766-64732785 | None:intergenic | 40.0% | |
| ACAATCATTGCACTTGACGA+AGG | - | chr4_1:64732767-64732786 | None:intergenic | 40.0% | |
| TTCGTCAAGTGCAATGATTG+TGG | + | chr4_1:64732766-64732785 | Msa0564150:CDS | 40.0% | |
| GCACCAAAACTCTAGATGAA+TGG | + | chr4_1:64732812-64732831 | Msa0564150:CDS | 40.0% | |
| !! | AGATGAATGGCTTGCTATGA+TGG | + | chr4_1:64732825-64732844 | Msa0564150:CDS | 40.0% |
| !! | AATGGCTTGCTATGATGGAT+TGG | + | chr4_1:64732830-64732849 | Msa0564150:CDS | 40.0% |
| TTGAGAAACGAGCAACTTGT+AGG | - | chr4_1:64732860-64732879 | None:intergenic | 40.0% | |
| CTCGTTTCTCAACAAGTCAT+TGG | + | chr4_1:64732868-64732887 | Msa0564150:CDS | 40.0% | |
| ! | TTCTCCTTCCATTTTGTTGC+AGG | + | chr4_1:64732906-64732925 | Msa0564150:CDS | 40.0% |
| AGAACCTGCAACAAAATGGA+AGG | - | chr4_1:64732913-64732932 | None:intergenic | 40.0% | |
| TAATATCACTCCCTAAGGCA+AGG | - | chr4_1:64733167-64733186 | None:intergenic | 40.0% | |
| GTGCCAATTCCTTACATTAC+AGG | - | chr4_1:64733834-64733853 | None:intergenic | 40.0% | |
| ACACTCTTATTAACCGAAGG+GGG | - | chr4_1:64734378-64734397 | None:intergenic | 40.0% | |
| !!! | TTCCTTTTTTTTGTGGTGGC+CGG | + | chr4_1:64735143-64735162 | Msa0564150:intron | 40.0% |
| ATACTCGTTTATTGTACCCG+TGG | - | chr4_1:64735269-64735288 | None:intergenic | 40.0% | |
| TTGGATTGTATCCATACCCA+CGG | + | chr4_1:64735324-64735343 | Msa0564150:intron | 40.0% | |
| !!! | ATTGAGGATTTTTAGGTGGG+CGG | - | chr4_1:64735447-64735466 | None:intergenic | 40.0% |
| ATCATATTTATCCAACGGGG+CGG | + | chr4_1:64735775-64735794 | Msa0564150:intron | 40.0% | |
| AGTAGTAGTGAGTAGTTAGG+TGG | - | chr4_1:64736066-64736085 | None:intergenic | 40.0% | |
| AGTACCCTCTCCTTAAAGTT+AGG | + | chr4_1:64736209-64736228 | Msa0564150:intron | 40.0% | |
| !! | TAAGAGTGTCTTTAGGGCAT+TGG | + | chr4_1:64736287-64736306 | Msa0564150:intron | 40.0% |
| AAATGTGGGACTGACCTTAA+TGG | - | chr4_1:64736834-64736853 | None:intergenic | 40.0% | |
| TTAGATGGCTAACAAGTTGC+TGG | + | chr4_1:64737607-64737626 | Msa0564150:intron | 40.0% | |
| AGTACATCTTATCCTAGGGA+TGG | + | chr4_1:64737658-64737677 | Msa0564150:intron | 40.0% | |
| CCCTCAAATTTAAACGGGTA+TGG | + | chr4_1:64737778-64737797 | Msa0564150:intron | 40.0% | |
| CCCATACCCGTTTAAATTTG+AGG | - | chr4_1:64737782-64737801 | None:intergenic | 40.0% | |
| AATTTAAACGGGTATGGGTG+CGG | + | chr4_1:64737784-64737803 | Msa0564150:intron | 40.0% | |
| TCTATATAATGTGCGGGCAT+GGG | - | chr4_1:64737837-64737856 | None:intergenic | 40.0% | |
| ACTTAGATACCCATAGGGTA+TGG | + | chr4_1:64738099-64738118 | Msa0564150:intron | 40.0% | |
| CTTAGATACCCATAGGGTAT+GGG | + | chr4_1:64738100-64738119 | Msa0564150:intron | 40.0% | |
| TTAGATACCCATAGGGTATG+GGG | + | chr4_1:64738101-64738120 | Msa0564150:intron | 40.0% | |
| TTAAAACACGGGTATGTGGA+TGG | + | chr4_1:64738178-64738197 | Msa0564150:intron | 40.0% | |
| TAAAACACGGGTATGTGGAT+GGG | + | chr4_1:64738179-64738198 | Msa0564150:intron | 40.0% | |
| AAAGAGAGGATAAGTCTGGT+GGG | - | chr4_1:64738283-64738302 | None:intergenic | 40.0% | |
| AAAAGAGAGGATAAGTCTGG+TGG | - | chr4_1:64738284-64738303 | None:intergenic | 40.0% | |
| TCACAAGACTAGAGATAAGC+TGG | + | chr4_1:64738675-64738694 | Msa0564150:intron | 40.0% | |
| ! | AAGCAACATGGACTTTGGAA+TGG | - | chr4_1:64738703-64738722 | None:intergenic | 40.0% |
| TTCACAAGCAACATGGACTT+TGG | - | chr4_1:64738708-64738727 | None:intergenic | 40.0% | |
| ! | TTGATGGTTCACAAGCAACA+TGG | - | chr4_1:64738715-64738734 | None:intergenic | 40.0% |
| GGGCAACACAAATTGTTAAG+AGG | + | chr4_1:64738789-64738808 | Msa0564150:intron | 40.0% | |
| !!! | TCATAAGTCGTTGGTTTTGC+AGG | + | chr4_1:64739068-64739087 | Msa0564150:intron | 40.0% |
| ! | TAAGTGTGGTGGGATTTCAT+TGG | + | chr4_1:64739101-64739120 | Msa0564150:CDS | 40.0% |
| ! | AAGTGTGGTGGGATTTCATT+GGG | + | chr4_1:64739102-64739121 | Msa0564150:CDS | 40.0% |
| ! | GAATGTTGAAGGGCAGTTTT+AGG | - | chr4_1:64739212-64739231 | None:intergenic | 40.0% |
| ACGGATCTTGGAATGTTGAA+GGG | - | chr4_1:64739222-64739241 | None:intergenic | 40.0% | |
| ! | GTCTCAACACCCCTTAATTT+TGG | + | chr4_1:64739240-64739259 | Msa0564150:CDS | 40.0% |
| GGAACCAGCTACATTTAAAC+GGG | + | chr4_1:64739272-64739291 | Msa0564150:CDS | 40.0% | |
| TCAACCCGTTTAAATGTAGC+TGG | - | chr4_1:64739279-64739298 | None:intergenic | 40.0% | |
| !! | TACATTTAAACGGGTTGACC+CGG | + | chr4_1:64739281-64739300 | Msa0564150:CDS | 40.0% |
| CCCAGCCAACAACAAAAAAA+TGG | + | chr4_1:64739320-64739339 | Msa0564150:CDS | 40.0% | |
| TCATTAGGGAGCTAGTTATG+TGG | - | chr4_1:64739359-64739378 | None:intergenic | 40.0% | |
| TATCATTGCCCCTACCATTA+GGG | - | chr4_1:64739521-64739540 | None:intergenic | 40.0% | |
| ATATCATTGCCCCTACCATT+AGG | - | chr4_1:64739522-64739541 | None:intergenic | 40.0% | |
| TGGTAGGGGCAATGATATAA+TGG | + | chr4_1:64739524-64739543 | Msa0564150:CDS | 40.0% | |
| GGTAGGGGCAATGATATAAT+GGG | + | chr4_1:64739525-64739544 | Msa0564150:CDS | 40.0% | |
| CCTCAACCTTGCATATCAAT+TGG | - | chr4_1:64739557-64739576 | None:intergenic | 40.0% | |
| CCAATTGATATGCAAGGTTG+AGG | + | chr4_1:64739554-64739573 | Msa0564150:CDS | 40.0% | |
| !!! | AATTTTGGCTAGCATGCTTG+TGG | + | chr4_1:64739614-64739633 | Msa0564150:CDS | 40.0% |
| !!! | TGTTGTTTTGGTGCTTCCTA+AGG | + | chr4_1:64739827-64739846 | Msa0564150:CDS | 40.0% |
| GATAGTGAAGTTTCATGGCC+AGG | - | chr4_1:64732609-64732628 | None:intergenic | 45.0% | |
| TTGTGGAGCAAGAACCATTG+AGG | + | chr4_1:64732783-64732802 | Msa0564150:CDS | 45.0% | |
| ! | TTTGGTGCAATTGGCCTCAA+TGG | - | chr4_1:64732800-64732819 | None:intergenic | 45.0% |
| GAAACGAGCAACTTGTAGGA+AGG | - | chr4_1:64732856-64732875 | None:intergenic | 45.0% | |
| TTTCGTACTCTCCTTGCCTT+AGG | + | chr4_1:64733153-64733172 | Msa0564150:intron | 45.0% | |
| TTCGTACTCTCCTTGCCTTA+GGG | + | chr4_1:64733154-64733173 | Msa0564150:intron | 45.0% | |
| AATTGAGAGAACACCCCCTT+CGG | + | chr4_1:64734362-64734381 | Msa0564150:intron | 45.0% | |
| !!! | TCCTTTTTTTTGTGGTGGCC+GGG | + | chr4_1:64735144-64735163 | Msa0564150:intron | 45.0% |
| ATATGGACACAGACACGGAT+TGG | + | chr4_1:64735305-64735324 | Msa0564150:intron | 45.0% | |
| TGGATTGTATCCATACCCAC+GGG | + | chr4_1:64735325-64735344 | Msa0564150:intron | 45.0% | |
| TCATATTTATCCAACGGGGC+GGG | + | chr4_1:64735776-64735795 | Msa0564150:intron | 45.0% | |
| TCAATGGATACCCATGGGTA+CGG | - | chr4_1:64735819-64735838 | None:intergenic | 45.0% | |
| GGATGTCAATGGATACCCAT+GGG | - | chr4_1:64735824-64735843 | None:intergenic | 45.0% | |
| TATCCATTGACATCCCTACC+CGG | + | chr4_1:64735829-64735848 | Msa0564150:intron | 45.0% | |
| ATATATGCAAGGTCCGGGTA+GGG | - | chr4_1:64735845-64735864 | None:intergenic | 45.0% | |
| AATATATGCAAGGTCCGGGT+AGG | - | chr4_1:64735846-64735865 | None:intergenic | 45.0% | |
| CGACTCTAACACAATTTCGC+CGG | + | chr4_1:64735989-64736008 | Msa0564150:intron | 45.0% | |
| GATCTTAACCCCCTCCATTA+AGG | + | chr4_1:64736817-64736836 | Msa0564150:intron | 45.0% | |
| GGTCAGTCCCACATTTATCA+AGG | + | chr4_1:64736838-64736857 | Msa0564150:intron | 45.0% | |
| GGACAGACCAGCAACAAATT+GGG | - | chr4_1:64737181-64737200 | None:intergenic | 45.0% | |
| TGGACAGACCAGCAACAAAT+TGG | - | chr4_1:64737182-64737201 | None:intergenic | 45.0% | |
| ! | CTCAGTGGTGTCAATAGTGA+TGG | - | chr4_1:64737249-64737268 | None:intergenic | 45.0% |
| CTTATCCTAGGGATGGCAAT+TGG | + | chr4_1:64737665-64737684 | Msa0564150:intron | 45.0% | |
| CAATTGGACCCAAGTCCAAT+GGG | + | chr4_1:64737681-64737700 | Msa0564150:intron | 45.0% | |
| !!! | TATTTTTTGCGGGTGCCCAT+TGG | - | chr4_1:64737699-64737718 | None:intergenic | 45.0% |
| !!! | TCCGCCATGGGTATTTTTTG+CGG | - | chr4_1:64737710-64737729 | None:intergenic | 45.0% |
| ! | CAAAAAATACCCATGGCGGA+CGG | + | chr4_1:64737710-64737729 | Msa0564150:intron | 45.0% |
| !! | AAAAAATACCCATGGCGGAC+GGG | + | chr4_1:64737711-64737730 | Msa0564150:intron | 45.0% |
| GGGTAAATACCCGCATTGTT+GGG | + | chr4_1:64737731-64737750 | Msa0564150:intron | 45.0% | |
| AATACCCGCATTGTTGGGTA+TGG | + | chr4_1:64737736-64737755 | Msa0564150:intron | 45.0% | |
| ATACCCGCATTGTTGGGTAT+GGG | + | chr4_1:64737737-64737756 | Msa0564150:intron | 45.0% | |
| ATTTAAACGGGTATGGGTGC+GGG | + | chr4_1:64737785-64737804 | Msa0564150:intron | 45.0% | |
| CTATATAATGTGCGGGCATG+GGG | - | chr4_1:64737836-64737855 | None:intergenic | 45.0% | |
| GTCTATATAATGTGCGGGCA+TGG | - | chr4_1:64737838-64737857 | None:intergenic | 45.0% | |
| ! | TCTTGTGAAAGTGCGGGTAA+TGG | + | chr4_1:64738062-64738081 | Msa0564150:intron | 45.0% |
| ! | CTTGTGAAAGTGCGGGTAAT+GGG | + | chr4_1:64738063-64738082 | Msa0564150:intron | 45.0% |
| ACCAAACTTATTGCCCACGA+GGG | + | chr4_1:64738130-64738149 | Msa0564150:intron | 45.0% | |
| AATGGCAATGGGTACCCATT+GGG | - | chr4_1:64738220-64738239 | None:intergenic | 45.0% | |
| AAATGGCAATGGGTACCCAT+TGG | - | chr4_1:64738221-64738240 | None:intergenic | 45.0% | |
| GATTTCATTGGGCCTTAGCT+GGG | + | chr4_1:64739113-64739132 | Msa0564150:CDS | 45.0% | |
| GACGGATCTTGGAATGTTGA+AGG | - | chr4_1:64739223-64739242 | None:intergenic | 45.0% | |
| TAGGGAGCTAGTTATGTGGA+AGG | - | chr4_1:64739355-64739374 | None:intergenic | 45.0% | |
| TTGATATGCAAGGTTGAGGC+AGG | + | chr4_1:64739558-64739577 | Msa0564150:CDS | 45.0% | |
| TTACTACACACTTCAAGGGG+TGG | + | chr4_1:64739794-64739813 | Msa0564150:CDS | 45.0% | |
| TACTACACACTTCAAGGGGT+GGG | + | chr4_1:64739795-64739814 | Msa0564150:CDS | 45.0% | |
| !!! | GGGAGATGAAGGTGTTGTTT+TGG | + | chr4_1:64739815-64739834 | Msa0564150:CDS | 45.0% |
| !!! | TGTTTTAAATAAAAATTTTA+AGG | + | chr4_1:64733426-64733445 | Msa0564150:intron | 5.0% |
| !! | TAATTTACTTAATTTATTAT+CGG | - | chr4_1:64735360-64735379 | None:intergenic | 5.0% |
| !!! | TTTTGAATTTATTTATTTTT+TGG | - | chr4_1:64735673-64735692 | None:intergenic | 5.0% |
| ! | AGAGTATCTTCAGTTGGGCC+AGG | + | chr4_1:64732538-64732557 | Msa0564150:CDS | 50.0% |
| GTGAAAAACATCCGACCCAG+TGG | - | chr4_1:64732569-64732588 | None:intergenic | 50.0% | |
| ! | CAATCCGAATGGTTTGGACC+TGG | + | chr4_1:64732588-64732607 | Msa0564150:CDS | 50.0% |
| ATGGCCAGGTCCAAACCATT+CGG | - | chr4_1:64732595-64732614 | None:intergenic | 50.0% | |
| TCCCGGCCACCACAAAAAAA+AGG | - | chr4_1:64735148-64735167 | None:intergenic | 50.0% | |
| ! | ATTTTTGCCACCCCTAGGTC+CGG | - | chr4_1:64735179-64735198 | None:intergenic | 50.0% |
| !! | TGGGTATTTTTGCCACCCCT+AGG | - | chr4_1:64735184-64735203 | None:intergenic | 50.0% |
| GGCAAAAATACCCATGCCCA+CGG | + | chr4_1:64735190-64735209 | Msa0564150:intron | 50.0% | |
| GCAAAAATACCCATGCCCAC+GGG | + | chr4_1:64735191-64735210 | Msa0564150:intron | 50.0% | |
| !!! | CCGTGATGGATTTTACCCAC+GGG | - | chr4_1:64735219-64735238 | None:intergenic | 50.0% |
| CCCGTGGGTAAAATCCATCA+CGG | + | chr4_1:64735216-64735235 | Msa0564150:intron | 50.0% | |
| !!! | CCCGTGATGGATTTTACCCA+CGG | - | chr4_1:64735220-64735239 | None:intergenic | 50.0% |
| CCGTGGGTAAAATCCATCAC+GGG | + | chr4_1:64735217-64735236 | Msa0564150:intron | 50.0% | |
| AATCCATCACGGGCATAGAG+CGG | + | chr4_1:64735227-64735246 | Msa0564150:intron | 50.0% | |
| GCATAGAGCGGGTAGCTAAA+CGG | + | chr4_1:64735239-64735258 | Msa0564150:intron | 50.0% | |
| CATAGAGCGGGTAGCTAAAC+GGG | + | chr4_1:64735240-64735259 | Msa0564150:intron | 50.0% | |
| GGTAGCTAAACGGGTATCCA+CGG | + | chr4_1:64735249-64735268 | Msa0564150:intron | 50.0% | |
| GTAGCTAAACGGGTATCCAC+GGG | + | chr4_1:64735250-64735269 | Msa0564150:intron | 50.0% | |
| CAAAACGTCATGGGTACTCG+TGG | + | chr4_1:64735688-64735707 | Msa0564150:intron | 50.0% | |
| GGGATGTCAATGGATACCCA+TGG | - | chr4_1:64735825-64735844 | None:intergenic | 50.0% | |
| ! | AACTAGTGCTCCAAGGGCAT+TGG | + | chr4_1:64736427-64736446 | Msa0564150:intron | 50.0% |
| GTCTTGCTAACCAATGCCCT+TGG | - | chr4_1:64736440-64736459 | None:intergenic | 50.0% | |
| TGGGACTGACCTTAATGGAG+GGG | - | chr4_1:64736829-64736848 | None:intergenic | 50.0% | |
| GTGGGACTGACCTTAATGGA+GGG | - | chr4_1:64736830-64736849 | None:intergenic | 50.0% | |
| TGTGGGACTGACCTTAATGG+AGG | - | chr4_1:64736831-64736850 | None:intergenic | 50.0% | |
| GCAATTGGACCCAAGTCCAA+TGG | + | chr4_1:64737680-64737699 | Msa0564150:intron | 50.0% | |
| GCACCCGCAAAAAATACCCA+TGG | + | chr4_1:64737703-64737722 | Msa0564150:intron | 50.0% | |
| !!! | CCGCCATGGGTATTTTTTGC+GGG | - | chr4_1:64737709-64737728 | None:intergenic | 50.0% |
| CCCGCAAAAAATACCCATGG+CGG | + | chr4_1:64737706-64737725 | Msa0564150:intron | 50.0% | |
| CGGGTAAATACCCGCATTGT+TGG | + | chr4_1:64737730-64737749 | Msa0564150:intron | 50.0% | |
| AAGCCCATACCCAACAATGC+GGG | - | chr4_1:64737743-64737762 | None:intergenic | 50.0% | |
| CAAGCCCATACCCAACAATG+CGG | - | chr4_1:64737744-64737763 | None:intergenic | 50.0% | |
| GCATTGTTGGGTATGGGCTT+GGG | + | chr4_1:64737743-64737762 | Msa0564150:intron | 50.0% | |
| !! | AAAGTGCGGGTAATGGGTGT+GGG | + | chr4_1:64738069-64738088 | Msa0564150:intron | 50.0% |
| ACGGGCACTTAGATACCCAT+AGG | + | chr4_1:64738093-64738112 | Msa0564150:intron | 50.0% | |
| CGGGCACTTAGATACCCATA+GGG | + | chr4_1:64738094-64738113 | Msa0564150:intron | 50.0% | |
| ATACCCATAGGGTATGGGGA+CGG | + | chr4_1:64738105-64738124 | Msa0564150:intron | 50.0% | |
| CACCAAACTTATTGCCCACG+AGG | + | chr4_1:64738129-64738148 | Msa0564150:intron | 50.0% | |
| ACCCTCGTGGGCAATAAGTT+TGG | - | chr4_1:64738134-64738153 | None:intergenic | 50.0% | |
| ACTTATTGCCCACGAGGGTA+TGG | + | chr4_1:64738135-64738154 | Msa0564150:intron | 50.0% | |
| ! | CTTATTGCCCACGAGGGTAT+GGG | + | chr4_1:64738136-64738155 | Msa0564150:intron | 50.0% |
| TCTATGGTACCCTGCCCAAT+GGG | + | chr4_1:64738203-64738222 | Msa0564150:intron | 50.0% | |
| ! | AGGATAAGTCTGGTGGGCAT+GGG | - | chr4_1:64738277-64738296 | None:intergenic | 50.0% |
| ! | TGTGCATGAGAGTATGTGCG+AGG | + | chr4_1:64738313-64738332 | Msa0564150:intron | 50.0% |
| GGATTTCATTGGGCCTTAGC+TGG | + | chr4_1:64739112-64739131 | Msa0564150:CDS | 50.0% | |
| CTTAGCTGGGCCCATGTTAT+GGG | + | chr4_1:64739126-64739145 | Msa0564150:CDS | 50.0% | |
| TTAGCTGGGCCCATGTTATG+GGG | + | chr4_1:64739127-64739146 | Msa0564150:CDS | 50.0% | |
| ATGTGGGTCCCCCATAACAT+GGG | - | chr4_1:64739139-64739158 | None:intergenic | 50.0% | |
| AATGTGGGTCCCCCATAACA+TGG | - | chr4_1:64739140-64739159 | None:intergenic | 50.0% | |
| !! | TTTAAACGGGTTGACCCGGT+TGG | + | chr4_1:64739285-64739304 | Msa0564150:CDS | 50.0% |
| !! | TTGACCCGGTTGGTGATCAT+TGG | + | chr4_1:64739295-64739314 | Msa0564150:CDS | 50.0% |
| GGATCCAATGATCACCAACC+GGG | - | chr4_1:64739302-64739321 | None:intergenic | 50.0% | |
| GGGATCCAATGATCACCAAC+CGG | - | chr4_1:64739303-64739322 | None:intergenic | 50.0% | |
| ! | GGAGGGGTTTGTTCAACACT+TGG | - | chr4_1:64739408-64739427 | None:intergenic | 50.0% |
| TTCGGATCCTTCTCGAACTC+GGG | - | chr4_1:64739469-64739488 | None:intergenic | 50.0% | |
| GTTCGGATCCTTCTCGAACT+CGG | - | chr4_1:64739470-64739489 | None:intergenic | 50.0% | |
| AACTGTCACGGTTGTGGGTT+CGG | - | chr4_1:64739487-64739506 | None:intergenic | 50.0% | |
| CGACAAACTGTCACGGTTGT+GGG | - | chr4_1:64739492-64739511 | None:intergenic | 50.0% | |
| TCGACAAACTGTCACGGTTG+TGG | - | chr4_1:64739493-64739512 | None:intergenic | 50.0% | |
| ATTGCCCCTACCATTAGGGT+CGG | - | chr4_1:64739517-64739536 | None:intergenic | 50.0% | |
| GCTAGCATGCTTGTGGATCA+AGG | + | chr4_1:64739621-64739640 | Msa0564150:CDS | 50.0% | |
| !! | TTTGACTCTGAGGCCGCACA+AGG | + | chr4_1:64732646-64732665 | Msa0564150:CDS | 55.0% |
| CAGATTCCGATCGCCGGAAT+CGG | - | chr4_1:64732738-64732757 | None:intergenic | 55.0% | |
| TTGACGGTCGGTCTCAACCA+AGG | - | chr4_1:64734645-64734664 | None:intergenic | 55.0% | |
| ! | TTTTTGCCACCCCTAGGTCC+GGG | - | chr4_1:64735178-64735197 | None:intergenic | 55.0% |
| ! | TTTTACCCACGGGTACCCGT+GGG | - | chr4_1:64735209-64735228 | None:intergenic | 55.0% |
| ! | ATTTTACCCACGGGTACCCG+TGG | - | chr4_1:64735210-64735229 | None:intergenic | 55.0% |
| ATCCATCACGGGCATAGAGC+GGG | + | chr4_1:64735228-64735247 | Msa0564150:intron | 55.0% | |
| TATCGGGTATGGGTACCCGT+GGG | - | chr4_1:64735343-64735362 | None:intergenic | 55.0% | |
| TTATCGGGTATGGGTACCCG+TGG | - | chr4_1:64735344-64735363 | None:intergenic | 55.0% | |
| GTGGATACCTCAATACCCGC+AGG | + | chr4_1:64735707-64735726 | Msa0564150:intron | 55.0% | |
| ACCCACTATACGGGTACCTG+CGG | - | chr4_1:64735726-64735745 | None:intergenic | 55.0% | |
| CTCGTGGGTACCCACTATAC+GGG | - | chr4_1:64735735-64735754 | None:intergenic | 55.0% | |
| CCTCGTGGGTACCCACTATA+CGG | - | chr4_1:64735736-64735755 | None:intergenic | 55.0% | |
| AGTGGGTACCCACGAGGATA+CGG | + | chr4_1:64735739-64735758 | Msa0564150:intron | 55.0% | |
| GGGACTGACCTTAATGGAGG+GGG | - | chr4_1:64736828-64736847 | None:intergenic | 55.0% | |
| TGGGTCCAATTGCCATCCCT+AGG | - | chr4_1:64737673-64737692 | None:intergenic | 55.0% | |
| GGTATTTACCCGTCCGCCAT+GGG | - | chr4_1:64737722-64737741 | None:intergenic | 55.0% | |
| CGCATTGTTGGGTATGGGCT+TGG | + | chr4_1:64737742-64737761 | Msa0564150:intron | 55.0% | |
| !! | GAAAGTGCGGGTAATGGGTG+TGG | + | chr4_1:64738068-64738087 | Msa0564150:intron | 55.0% |
| TGTCCGTCCCCATACCCTAT+GGG | - | chr4_1:64738111-64738130 | None:intergenic | 55.0% | |
| ! | GGGTATGTGGATGGGCTCTA+TGG | + | chr4_1:64738187-64738206 | Msa0564150:intron | 55.0% |
| CTCTATGGTACCCTGCCCAA+TGG | + | chr4_1:64738202-64738221 | Msa0564150:intron | 55.0% | |
| CAATGGGTACCCATTGGGCA+GGG | - | chr4_1:64738215-64738234 | None:intergenic | 55.0% | |
| ! | GGATAAGTCTGGTGGGCATG+GGG | - | chr4_1:64738276-64738295 | None:intergenic | 55.0% |
| ! | GAGGATAAGTCTGGTGGGCA+TGG | - | chr4_1:64738278-64738297 | None:intergenic | 55.0% |
| CCATAACATGGGCCCAGCTA+AGG | - | chr4_1:64739128-64739147 | None:intergenic | 55.0% | |
| CCTTAGCTGGGCCCATGTTA+TGG | + | chr4_1:64739125-64739144 | Msa0564150:CDS | 55.0% | |
| TAGCTGGGCCCATGTTATGG+GGG | + | chr4_1:64739128-64739147 | Msa0564150:CDS | 55.0% | |
| !! | AGGGGTGTTGAGACGGATCT+TGG | - | chr4_1:64739234-64739253 | None:intergenic | 55.0% |
| TGCATAGCCCGAGTTCGAGA+AGG | + | chr4_1:64739459-64739478 | Msa0564150:CDS | 55.0% | |
| GTCGGGTCGACAAACTGTCA+CGG | - | chr4_1:64739499-64739518 | None:intergenic | 55.0% | |
| GTTTGTCGACCCGACCCTAA+TGG | + | chr4_1:64739504-64739523 | Msa0564150:CDS | 55.0% | |
| TCGACCCGACCCTAATGGTA+GGG | + | chr4_1:64739509-64739528 | Msa0564150:CDS | 55.0% | |
| TTGCCCCTACCATTAGGGTC+GGG | - | chr4_1:64739516-64739535 | None:intergenic | 55.0% | |
| CTTCAAGGGGTGGGAGATGA+AGG | + | chr4_1:64739804-64739823 | Msa0564150:CDS | 55.0% | |
| TTGGGCCAGGTCATGCCACT+GGG | + | chr4_1:64732551-64732570 | Msa0564150:CDS | 60.0% | |
| ! | TCATCCCTTGCGGCCGATTC+CGG | + | chr4_1:64732722-64732741 | Msa0564150:CDS | 60.0% |
| CGATTCCGGCGATCGGAATC+TGG | + | chr4_1:64732736-64732755 | Msa0564150:CDS | 60.0% | |
| GTCGACCAGATTCCGATCGC+CGG | - | chr4_1:64732744-64732763 | None:intergenic | 60.0% | |
| TAGGTCCGGGGTTCGAATCC+CGG | - | chr4_1:64735165-64735184 | None:intergenic | 60.0% | |
| GGATTCGAACCCCGGACCTA+GGG | + | chr4_1:64735165-64735184 | Msa0564150:intron | 60.0% | |
| GATTCGAACCCCGGACCTAG+GGG | + | chr4_1:64735166-64735185 | Msa0564150:intron | 60.0% | |
| ! | TTTTGCCACCCCTAGGTCCG+GGG | - | chr4_1:64735177-64735196 | None:intergenic | 60.0% |
| TACCCGCTCTATGCCCGTGA+TGG | - | chr4_1:64735233-64735252 | None:intergenic | 60.0% | |
| GGTATGGGTACCCGTGGGTA+TGG | - | chr4_1:64735338-64735357 | None:intergenic | 60.0% | |
| ! | ACGGGTACCTGCGGGTATTG+AGG | - | chr4_1:64735717-64735736 | None:intergenic | 60.0% |
| ACCCGCAGGTACCCGTATAG+TGG | + | chr4_1:64735721-64735740 | Msa0564150:intron | 60.0% | |
| CCCACTATACGGGTACCTGC+GGG | - | chr4_1:64735725-64735744 | None:intergenic | 60.0% | |
| CCCGCAGGTACCCGTATAGT+GGG | + | chr4_1:64735722-64735741 | Msa0564150:intron | 60.0% | |
| !! | CCGTATAGTGGGTACCCACG+AGG | + | chr4_1:64735733-64735752 | Msa0564150:intron | 60.0% |
| GTGGGTACCCACGAGGATAC+GGG | + | chr4_1:64735740-64735759 | Msa0564150:intron | 60.0% | |
| TGGGTACCCACGAGGATACG+GGG | + | chr4_1:64735741-64735760 | Msa0564150:intron | 60.0% | |
| TTTATCCAACGGGGCGGGCA+CGG | + | chr4_1:64735781-64735800 | Msa0564150:intron | 60.0% | |
| GGTCCGGGTAGGGATGTCAA+TGG | - | chr4_1:64735835-64735854 | None:intergenic | 60.0% | |
| TGCGGGTGCCCATTGGACTT+GGG | - | chr4_1:64737692-64737711 | None:intergenic | 60.0% | |
| TTGCGGGTGCCCATTGGACT+TGG | - | chr4_1:64737693-64737712 | None:intergenic | 60.0% | |
| GGGTATTTACCCGTCCGCCA+TGG | - | chr4_1:64737723-64737742 | None:intergenic | 60.0% | |
| GTTGGGTATGGGCTTGGGCA+CGG | + | chr4_1:64737748-64737767 | Msa0564150:intron | 60.0% | |
| TTGGGTATGGGCTTGGGCAC+GGG | + | chr4_1:64737749-64737768 | Msa0564150:intron | 60.0% | |
| AACGGGTATGGGTGCGGGTA+CGG | + | chr4_1:64737790-64737809 | Msa0564150:intron | 60.0% | |
| TAATGTGCGGGCATGGGGCA+GGG | - | chr4_1:64737831-64737850 | None:intergenic | 60.0% | |
| ATAATGTGCGGGCATGGGGC+AGG | - | chr4_1:64737832-64737851 | None:intergenic | 60.0% | |
| !! | GCGGGTAATGGGTGTGGGTA+CGG | + | chr4_1:64738074-64738093 | Msa0564150:intron | 60.0% |
| !! | CGGGTAATGGGTGTGGGTAC+GGG | + | chr4_1:64738075-64738094 | Msa0564150:intron | 60.0% |
| GTGTCCGTCCCCATACCCTA+TGG | - | chr4_1:64738112-64738131 | None:intergenic | 60.0% | |
| ! | GAGGGTATGGGCTCGGGTAT+GGG | + | chr4_1:64738148-64738167 | Msa0564150:intron | 60.0% |
| AGGGTATGGGCTCGGGTATG+GGG | + | chr4_1:64738149-64738168 | Msa0564150:intron | 60.0% | |
| GCAATGGGTACCCATTGGGC+AGG | - | chr4_1:64738216-64738235 | None:intergenic | 60.0% | |
| GTCGACCCGACCCTAATGGT+AGG | + | chr4_1:64739508-64739527 | Msa0564150:CDS | 60.0% | |
| CGACCCGACCCTAATGGTAG+GGG | + | chr4_1:64739510-64739529 | Msa0564150:CDS | 60.0% | |
| GTTGGGCCAGGTCATGCCAC+TGG | + | chr4_1:64732550-64732569 | Msa0564150:CDS | 65.0% | |
| GCCAGGTCATGCCACTGGGT+CGG | + | chr4_1:64732555-64732574 | Msa0564150:CDS | 65.0% | |
| TCCGACCCAGTGGCATGACC+TGG | - | chr4_1:64732559-64732578 | None:intergenic | 65.0% | |
| ATCGCCGGAATCGGCCGCAA+GGG | - | chr4_1:64732729-64732748 | None:intergenic | 65.0% | |
| ! | TTGCGGCCGATTCCGGCGAT+CGG | + | chr4_1:64732729-64732748 | Msa0564150:CDS | 65.0% |
| GGGATTCGAACCCCGGACCT+AGG | + | chr4_1:64735164-64735183 | Msa0564150:intron | 65.0% | |
| TACCCACGAGGATACGGGGC+TGG | + | chr4_1:64735745-64735764 | Msa0564150:intron | 65.0% | |
| TGCCAGCCCCGTATCCTCGT+GGG | - | chr4_1:64735750-64735769 | None:intergenic | 65.0% | |
| ! | ACGAGGATACGGGGCTGGCA+CGG | + | chr4_1:64735750-64735769 | Msa0564150:intron | 65.0% |
| TTATCCAACGGGGCGGGCAC+GGG | + | chr4_1:64735782-64735801 | Msa0564150:intron | 65.0% | |
| ACGGGTATGGGTGCGGGTAC+GGG | + | chr4_1:64737791-64737810 | Msa0564150:intron | 65.0% | |
| ! | TGCCCACGAGGGTATGGGCT+CGG | + | chr4_1:64738141-64738160 | Msa0564150:intron | 65.0% |
| ACCCGAGCCCATACCCTCGT+GGG | - | chr4_1:64738146-64738165 | None:intergenic | 65.0% | |
| TACCCGAGCCCATACCCTCG+TGG | - | chr4_1:64738147-64738166 | None:intergenic | 65.0% | |
| ! | CGAGGGTATGGGCTCGGGTA+TGG | + | chr4_1:64738147-64738166 | Msa0564150:intron | 65.0% |
| ! | AGTCTGGTGGGCATGGGGCA+GGG | - | chr4_1:64738271-64738290 | None:intergenic | 65.0% |
| ! | AAGTCTGGTGGGCATGGGGC+AGG | - | chr4_1:64738272-64738291 | None:intergenic | 65.0% |
| GATCGCCGGAATCGGCCGCA+AGG | - | chr4_1:64732730-64732749 | None:intergenic | 70.0% | |
| GGTGGCCGGGATTCGAACCC+CGG | + | chr4_1:64735157-64735176 | Msa0564150:intron | 70.0% | |
| TCGAACCCCGGACCTAGGGG+TGG | + | chr4_1:64735169-64735188 | Msa0564150:intron | 70.0% | |
| CCACGGGTACCCGTGGGCAT+GGG | - | chr4_1:64735203-64735222 | None:intergenic | 70.0% | |
| CCATGCCCACGGGTACCCGT+GGG | + | chr4_1:64735201-64735220 | Msa0564150:intron | 70.0% | |
| GTGCCAGCCCCGTATCCTCG+TGG | - | chr4_1:64735751-64735770 | None:intergenic | 70.0% | |
| ! | GCCCACGAGGGTATGGGCTC+GGG | + | chr4_1:64738142-64738161 | Msa0564150:intron | 70.0% |
| ! | TGGTGGGCATGGGGCAGGGT+GGG | - | chr4_1:64738267-64738286 | None:intergenic | 70.0% |
| CCCATGCCCACGGGTACCCG+TGG | + | chr4_1:64735200-64735219 | Msa0564150:intron | 75.0% | |
| CCCACGGGTACCCGTGGGCA+TGG | - | chr4_1:64735204-64735223 | None:intergenic | 75.0% | |
| GATACCCGTGCCCGCCCCGT+TGG | - | chr4_1:64735789-64735808 | None:intergenic | 75.0% | |
| GTGCGGGCATGGGGCAGGGT+GGG | - | chr4_1:64737827-64737846 | None:intergenic | 75.0% | |
| TGTGCGGGCATGGGGCAGGG+TGG | - | chr4_1:64737828-64737847 | None:intergenic | 75.0% | |
| ! | CTGGTGGGCATGGGGCAGGG+TGG | - | chr4_1:64738268-64738287 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 64732431 | 64740144 | 64732431 | ID=Msa0564150;Name=Msa0564150 |
| chr4_1 | mRNA | 64732431 | 64740144 | 64732431 | ID=Msa0564150-mRNA-1;Parent=Msa0564150;Name=Msa0564150-mRNA-1;_AED=0.03;_eAED=0.03;_QI=62|1|1|1|1|1|2|185|434 |
| chr4_1 | exon | 64732431 | 64732927 | 64732431 | ID=Msa0564150-mRNA-1:exon:20708;Parent=Msa0564150-mRNA-1 |
| chr4_1 | exon | 64739090 | 64740144 | 64739090 | ID=Msa0564150-mRNA-1:exon:20709;Parent=Msa0564150-mRNA-1 |
| chr4_1 | five_prime_UTR | 64732431 | 64732492 | 64732431 | ID=Msa0564150-mRNA-1:five_prime_utr;Parent=Msa0564150-mRNA-1 |
| chr4_1 | CDS | 64732493 | 64732927 | 64732493 | ID=Msa0564150-mRNA-1:cds;Parent=Msa0564150-mRNA-1 |
| chr4_1 | CDS | 64739090 | 64739959 | 64739090 | ID=Msa0564150-mRNA-1:cds;Parent=Msa0564150-mRNA-1 |
| chr4_1 | three_prime_UTR | 64739960 | 64740144 | 64739960 | ID=Msa0564150-mRNA-1:three_prime_utr;Parent=Msa0564150-mRNA-1 |
| Gene Sequence |
| Protein sequence |
