Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1308770 | XP_024629162.1 | 88.584 | 438 | 50 | 0 | 1 | 438 | 1 | 438 | 0.0 | 771 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1308770 | sp|A3KPW7|PTAR1_DANRE | 32.900 | 231 | 112 | 7 | 143 | 334 | 93 | 319 | 4.20e-25 | 110 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1308770 | A0A072TJX1 | 83.441 | 465 | 50 | 1 | 1 | 438 | 1 | 465 | 0.0 | 758 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0079070 | Msa1308770 | 0.807404 | 5.139594e-50 | -8.615850e-47 |
| Msa0090570 | Msa1308770 | 0.806899 | 6.572669e-50 | -8.615850e-47 |
| Msa0661650 | Msa1308770 | 0.802259 | 6.105816e-49 | -8.615850e-47 |
| Msa0693010 | Msa1308770 | -0.809939 | 1.476527e-50 | -8.615850e-47 |
| Msa0127800 | Msa1308770 | 0.809138 | 2.194532e-50 | -8.615850e-47 |
| Msa1308770 | Msa1340470 | 0.804217 | 2.401230e-49 | -8.615850e-47 |
| Msa1308770 | Msa1400870 | -0.806129 | 9.554810e-50 | -8.615850e-47 |
| Msa0464680 | Msa1308770 | 0.806095 | 9.713581e-50 | -8.615850e-47 |
| Msa1104090 | Msa1308770 | 0.816394 | 5.657442e-52 | -8.615850e-47 |
| Msa0309770 | Msa1308770 | 0.812950 | 3.275684e-51 | -8.615850e-47 |
| Msa1113170 | Msa1308770 | 0.805272 | 1.445909e-49 | -8.615850e-47 |
| Msa1211230 | Msa1308770 | -0.800046 | 1.731701e-48 | -8.615850e-47 |
| Msa0897330 | Msa1308770 | 0.807345 | 5.289270e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1308770 | MtrunA17_Chr8g0335281 | 83.226 | 465 | 51 | 1 | 1 | 438 | 1 | 465 | 0.0 | 756 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1308770 | AT1G10095.1 | 48.655 | 446 | 194 | 7 | 1 | 438 | 1 | 419 | 8.01e-133 | 389 |
| Msa1308770 | AT1G10095.2 | 50.118 | 425 | 177 | 8 | 1 | 416 | 1 | 399 | 1.01e-131 | 386 |
| Msa1308770 | AT1G10095.3 | 51.515 | 330 | 127 | 5 | 1 | 323 | 1 | 304 | 1.47e-105 | 315 |
| Msa1308770 | AT1G10095.4 | 51.368 | 329 | 127 | 5 | 1 | 322 | 1 | 303 | 5.04e-105 | 314 |
Find 97 sgRNAs with CRISPR-Local
Find 455 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAAATTTCAAAGAGATTT+TGG | 0.053225 | 8_4:+5124999 | Msa1308770:CDS |
| CTTTATTTGTAAAATTATTT+TGG | 0.061723 | 8_4:-5128676 | None:intergenic |
| ACTCCAAGCTTGTTCACTTT+TGG | 0.178561 | 8_4:-5124637 | None:intergenic |
| AAAGTATAGTTTCTCTTGTT+TGG | 0.245840 | 8_4:-5123425 | None:intergenic |
| TTGGAACAGAGATCATAAAT+TGG | 0.250447 | 8_4:+5123447 | Msa1308770:CDS |
| CTGCTCCTTGACTTGAGATA+TGG | 0.265621 | 8_4:-5128541 | None:intergenic |
| CTTCATTTAACAATGAAAAC+TGG | 0.275914 | 8_4:-5123324 | None:intergenic |
| GAACAGTAACACAATGGTTT+TGG | 0.279747 | 8_4:+5120963 | Msa1308770:five_prime_UTR |
| TAGAAATTCAGAATCGAAAT+TGG | 0.280241 | 8_4:-5120993 | None:intergenic |
| AATGAAGAGTCTAATTCTTA+TGG | 0.301067 | 8_4:+5122248 | Msa1308770:CDS |
| AACAAGAGAAACTATACTTT+TGG | 0.306893 | 8_4:+5123428 | Msa1308770:CDS |
| TTCTGAAAGCTGATTCAAAA+AGG | 0.315689 | 8_4:+5121017 | Msa1308770:five_prime_UTR |
| TTATGACTGCTTGGAATTGC+AGG | 0.316298 | 8_4:+5123665 | Msa1308770:CDS |
| TGTAAGTTGTAGCACAAAAT+AGG | 0.316702 | 8_4:+5128742 | Msa1308770:three_prime_UTR |
| TGTTTCTTGTTTCATACTAT+AGG | 0.339556 | 8_4:-5128874 | None:intergenic |
| TGTAGATTTGAAGACCTTAC+TGG | 0.343620 | 8_4:+5128448 | Msa1308770:CDS |
| GCGGAAGAATCTGCATCTTA+TGG | 0.356630 | 8_4:+5126564 | Msa1308770:CDS |
| AAATGAAGAATCTGGCATTT+CGG | 0.372365 | 8_4:+5123339 | Msa1308770:CDS |
| ATGCAGTGCAGCCCAACTTC+TGG | 0.379066 | 8_4:-5126322 | None:intergenic |
| GTCGCTTTCTTTCCACGTGC+TGG | 0.380037 | 8_4:+5128096 | Msa1308770:CDS |
| TTAAATAGAGAAAATTTCTC+AGG | 0.396484 | 8_4:-5128482 | None:intergenic |
| GTGAACAAGCTTGGAGTCAT+AGG | 0.403674 | 8_4:+5124643 | Msa1308770:CDS |
| TGGAACAGAGATCATAAATT+GGG | 0.406123 | 8_4:+5123448 | Msa1308770:CDS |
| CCGTACATCAATCAGCAAAC+AGG | 0.410034 | 8_4:+5123380 | Msa1308770:CDS |
| CTATTATTACCTTCACTGCT+TGG | 0.412692 | 8_4:-5126605 | None:intergenic |
| CAGCAAGTGCCCAAGCCTCT+TGG | 0.415655 | 8_4:+5128398 | Msa1308770:intron |
| AGTTCATTTCCAAGAGGCTT+GGG | 0.418687 | 8_4:-5128407 | None:intergenic |
| GTGCTTGGAATCACCGTTGC+TGG | 0.420371 | 8_4:+5125467 | Msa1308770:CDS |
| TCATTGTTAAATGAAGAATC+TGG | 0.425321 | 8_4:+5123331 | Msa1308770:CDS |
| CTGTTTGCTGATTGATGTAC+GGG | 0.432375 | 8_4:-5123379 | None:intergenic |
| TAAACAAAGTTCAATGTTGT+CGG | 0.441931 | 8_4:-5123563 | None:intergenic |
| ATTCTGCTAGTTACATACTT+TGG | 0.453158 | 8_4:+5128282 | Msa1308770:CDS |
| TGCTCCTTGACTTGAGATAT+GGG | 0.453784 | 8_4:-5128540 | None:intergenic |
| CAAAGATGAATTATCGTGCT+TGG | 0.454642 | 8_4:+5125452 | Msa1308770:CDS |
| CCTGTTTGCTGATTGATGTA+CGG | 0.455661 | 8_4:-5123380 | None:intergenic |
| CTCATACATGACTAAAGAAC+AGG | 0.456796 | 8_4:+5125495 | Msa1308770:CDS |
| AAGTCAAGGAGCAGGAGTTT+CGG | 0.461495 | 8_4:+5128550 | Msa1308770:three_prime_UTR |
| CAGAATATGTGGCTTGTGCT+TGG | 0.464432 | 8_4:-5128265 | None:intergenic |
| GCTAGCATGTTCCATGACTT+TGG | 0.467130 | 8_4:+5128173 | Msa1308770:CDS |
| AGTTGAAGAAATCCAGAAGT+TGG | 0.470128 | 8_4:+5126310 | Msa1308770:CDS |
| TTTGGATCCAGTGATGAGCT+GGG | 0.471807 | 8_4:+5123286 | Msa1308770:intron |
| GAGTTCATTTCCAAGAGGCT+TGG | 0.484081 | 8_4:-5128408 | None:intergenic |
| CACCCAAAAGTGAACAAGCT+TGG | 0.486777 | 8_4:+5124634 | Msa1308770:CDS |
| GCGGTTACTGCAGAAAATTA+TGG | 0.487418 | 8_4:+5126527 | Msa1308770:intron |
| TTACATACTTTGGTTGAAAG+TGG | 0.487489 | 8_4:+5128292 | Msa1308770:CDS |
| GAACATGCTAGCTTCCTCCT+TGG | 0.501239 | 8_4:-5128162 | None:intergenic |
| AGCTTCCTCCTTGGAATGGT+CGG | 0.501888 | 8_4:-5128153 | None:intergenic |
| TTTGTCAGGACGAACTCGAT+TGG | 0.506946 | 8_4:+5127398 | Msa1308770:intron |
| TAATTCTTATGGAAATGCTA+CGG | 0.511716 | 8_4:+5122259 | Msa1308770:CDS |
| TACGGGTCTCTTGCATCAGC+TGG | 0.514712 | 8_4:+5122277 | Msa1308770:CDS |
| CAGATTCTTCCGCATTACTT+CGG | 0.515451 | 8_4:-5126554 | None:intergenic |
| CATTGATAAAGCGTTATGTC+GGG | 0.518054 | 8_4:+5127428 | Msa1308770:CDS |
| GTTGAAGAAATCCAGAAGTT+GGG | 0.520728 | 8_4:+5126311 | Msa1308770:CDS |
| GCTGTGACTTTATGACTGCT+TGG | 0.521973 | 8_4:+5123656 | Msa1308770:CDS |
| TTTAACAATGAAAACTGGGA+TGG | 0.522744 | 8_4:-5123319 | None:intergenic |
| TAAATAGAGAAAATTTCTCA+GGG | 0.528638 | 8_4:-5128481 | None:intergenic |
| AATTCTTATGGAAATGCTAC+GGG | 0.531467 | 8_4:+5122260 | Msa1308770:CDS |
| TTCATTTAACAATGAAAACT+GGG | 0.534643 | 8_4:-5123323 | None:intergenic |
| CAAAATAATAAACAATACAT+AGG | 0.536084 | 8_4:-5128609 | None:intergenic |
| TATGTAACTAGCAGAATATG+TGG | 0.536777 | 8_4:-5128276 | None:intergenic |
| GGCGTTTAAACAATACAAGA+TGG | 0.537525 | 8_4:+5123528 | Msa1308770:CDS |
| ATTAGTGTCTAAGAAGAAGC+AGG | 0.548077 | 8_4:+5124560 | Msa1308770:CDS |
| GCAGAAAGGTGCCAAAGTCA+TGG | 0.549286 | 8_4:-5128184 | None:intergenic |
| CTACATCTCTTATCTTCTCA+AGG | 0.549991 | 8_4:-5128430 | None:intergenic |
| TGTTTAGCAGCTCTATATAA+CGG | 0.552466 | 8_4:-5123493 | None:intergenic |
| CATATCTCAAGTCAAGGAGC+AGG | 0.555571 | 8_4:+5128542 | Msa1308770:three_prime_UTR |
| AGGGCATGACTTATCCAGTA+AGG | 0.556656 | 8_4:-5128462 | None:intergenic |
| ACATTGATAAAGCGTTATGT+CGG | 0.558116 | 8_4:+5127427 | Msa1308770:CDS |
| GGGGAAAGAATCTGAGCTTG+TGG | 0.560130 | 8_4:+5125020 | Msa1308770:CDS |
| TGCTAGCTTCCTCCTTGGAA+TGG | 0.562432 | 8_4:-5128157 | None:intergenic |
| CAGCAAAAGTCGAGGTGTGA+AGG | 0.567112 | 8_4:-5128223 | None:intergenic |
| GTATGCTTTCAAGATGGTCA+TGG | 0.570789 | 8_4:-5123600 | None:intergenic |
| GCTATACATCAATAATGTAT+CGG | 0.584070 | 8_4:-5128852 | None:intergenic |
| TATGCTTTCAAGATGGTCAT+GGG | 0.585632 | 8_4:-5123599 | None:intergenic |
| ACATAATTCATTCTGCAGAA+AGG | 0.585680 | 8_4:-5128198 | None:intergenic |
| TCAAAAGTATGCTTTCAAGA+TGG | 0.587892 | 8_4:-5123606 | None:intergenic |
| TTGGATCCAGTGATGAGCTG+GGG | 0.598597 | 8_4:+5123287 | Msa1308770:intron |
| GCGTTTAAACAATACAAGAT+GGG | 0.601607 | 8_4:+5123529 | Msa1308770:CDS |
| AAAATTATTTATCCAGCACG+TGG | 0.606857 | 8_4:-5128108 | None:intergenic |
| TATTTGCACAAATCACTCGT+CGG | 0.606960 | 8_4:-5128710 | None:intergenic |
| TGCTAAACATGCATTTATGA+CGG | 0.607063 | 8_4:+5123507 | Msa1308770:CDS |
| AGTTCCCATATCTCAAGTCA+AGG | 0.608361 | 8_4:+5128536 | Msa1308770:three_prime_UTR |
| TGACGGATCCGACCATTCCA+AGG | 0.613951 | 8_4:+5128145 | Msa1308770:CDS |
| CGTACATCAATCAGCAAACA+GGG | 0.623280 | 8_4:+5123381 | Msa1308770:CDS |
| TTTCTAACTGATACTAGTGA+CGG | 0.623825 | 8_4:+5128128 | Msa1308770:CDS |
| GGGTCTCTTGCATCAGCTGG+AGG | 0.626069 | 8_4:+5122280 | Msa1308770:CDS |
| AGATGGTCATGGGATACTGA+AGG | 0.627744 | 8_4:-5123589 | None:intergenic |
| AAAGCGTTATGTCGGGAGAG+AGG | 0.643432 | 8_4:+5127435 | Msa1308770:CDS |
| TCAAGGAGTTCATTTCCAAG+AGG | 0.647521 | 8_4:-5128413 | None:intergenic |
| TGTATGAGATTAGCCAGCAA+CGG | 0.659532 | 8_4:-5125480 | None:intergenic |
| TTATATTGTCCAAGCAGTGA+AGG | 0.660492 | 8_4:+5126596 | Msa1308770:CDS |
| TATGGAGGACCGAAGTAATG+CGG | 0.664604 | 8_4:+5126545 | Msa1308770:CDS |
| ATCGTCATCAGCAAAAGTCG+AGG | 0.675500 | 8_4:-5128231 | None:intergenic |
| TGGTCATGGGATACTGAAGG+AGG | 0.684375 | 8_4:-5123586 | None:intergenic |
| GTTACTGCAGAAAATTATGG+AGG | 0.691465 | 8_4:+5126530 | Msa1308770:CDS |
| TAGAACGAACAGTAACACAA+TGG | 0.720444 | 8_4:+5120957 | Msa1308770:five_prime_UTR |
| CGGATCCGACCATTCCAAGG+AGG | 0.730357 | 8_4:+5128148 | Msa1308770:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTCTTAATAAAAAATTG+GGG | - | chr8_4:5122373-5122392 | None:intergenic | 10.0% |
| !! | CAAATTTCTTAATAAAAAAT+TGG | - | chr8_4:5122375-5122394 | None:intergenic | 10.0% |
| !!! | ATTTTTTATTAAGAAATTTG+TGG | + | chr8_4:5122375-5122394 | Msa1308770:intron | 10.0% |
| !!! | TTTTTTATTAAGAAATTTGT+GGG | + | chr8_4:5122376-5122395 | Msa1308770:intron | 10.0% |
| !!! | TGATTAATATATTTTTAAGA+TGG | + | chr8_4:5122663-5122682 | Msa1308770:intron | 10.0% |
| !! | ATATTTATTAAACGAAAAAT+TGG | - | chr8_4:5123087-5123106 | None:intergenic | 10.0% |
| !! | AAAACATAATATAAAGTTTA+AGG | - | chr8_4:5124398-5124417 | None:intergenic | 10.0% |
| !! | AACTAATAATAAACATAAAA+TGG | - | chr8_4:5127468-5127487 | None:intergenic | 10.0% |
| !!! | CTTTATTTGTAAAATTATTT+TGG | - | chr8_4:5128679-5128698 | None:intergenic | 10.0% |
| !!! | TTTTTATGTAATTCTTTGAT+CGG | + | chr8_4:5121390-5121409 | Msa1308770:intron | 15.0% |
| !! | ATGTAATATGTACATATTAT+AGG | + | chr8_4:5121845-5121864 | Msa1308770:intron | 15.0% |
| !! | TGTAATATGTACATATTATA+GGG | + | chr8_4:5121846-5121865 | Msa1308770:intron | 15.0% |
| !! | AAAAGAAAGAAAAAAAAGAA+TGG | - | chr8_4:5122177-5122196 | None:intergenic | 15.0% |
| !!! | ATATATTTTTAAGATGGAAA+TGG | + | chr8_4:5122669-5122688 | Msa1308770:intron | 15.0% |
| !! | CTAAAGAAAAATATATGTAA+TGG | - | chr8_4:5122931-5122950 | None:intergenic | 15.0% |
| !! | AGAAAATATAAAAAGATAAG+AGG | - | chr8_4:5123695-5123714 | None:intergenic | 15.0% |
| !!! | AGCTTATTGTATTATTTTTT+TGG | + | chr8_4:5124275-5124294 | Msa1308770:intron | 15.0% |
| !!! | TATTATTTTTTTGGCTTTAT+TGG | + | chr8_4:5124284-5124303 | Msa1308770:intron | 15.0% |
| !! | ATATATGGTATGAATATATA+TGG | - | chr8_4:5124736-5124755 | None:intergenic | 15.0% |
| !! | AATTTGACAATAGAAAATTA+GGG | - | chr8_4:5124773-5124792 | None:intergenic | 15.0% |
| !! | AAATTTGACAATAGAAAATT+AGG | - | chr8_4:5124774-5124793 | None:intergenic | 15.0% |
| !! | TTTCAATAAAAAGTTAAACA+TGG | + | chr8_4:5125887-5125906 | Msa1308770:intron | 15.0% |
| !! | AAAAATTGATTGAAATTGAA+AGG | + | chr8_4:5126943-5126962 | Msa1308770:intron | 15.0% |
| !! | AATGAAGATATTATTTGTAA+TGG | - | chr8_4:5127551-5127570 | None:intergenic | 15.0% |
| !!! | TTTATATTTTATTGAAACAC+CGG | - | chr8_4:5127643-5127662 | None:intergenic | 15.0% |
| !! | CAAAATAATAAACAATACAT+AGG | - | chr8_4:5128612-5128631 | None:intergenic | 15.0% |
| !!! | AATTTTACAAATAAAGATTC+AGG | + | chr8_4:5128683-5128702 | Msa1308770:three_prime_UTR | 15.0% |
| !! | TAAAAAAAGAACTTGTAGAT+AGG | + | chr8_4:5121716-5121735 | Msa1308770:intron | 20.0% |
| !! | AATATGTACATATTACATGA+GGG | - | chr8_4:5121843-5121862 | None:intergenic | 20.0% |
| !! | TAATATGTACATATTACATG+AGG | - | chr8_4:5121844-5121863 | None:intergenic | 20.0% |
| !!! | TAAAATTTTCCTGAAAATTC+TGG | + | chr8_4:5121985-5122004 | Msa1308770:intron | 20.0% |
| !!! | GATTCTTTTATTGTTCTAAT+AGG | + | chr8_4:5122034-5122053 | Msa1308770:intron | 20.0% |
| !! | AAGGAATCAATTTCTATAAA+GGG | - | chr8_4:5122154-5122173 | None:intergenic | 20.0% |
| !!! | CAAATTTTGAGCAATTATTT+AGG | - | chr8_4:5122867-5122886 | None:intergenic | 20.0% |
| !! | CTAAATAATTGCTCAAAATT+TGG | + | chr8_4:5122865-5122884 | Msa1308770:intron | 20.0% |
| !! | TTCATTTAACAATGAAAACT+GGG | - | chr8_4:5123326-5123345 | None:intergenic | 20.0% |
| !!! | AATCCAGAATATCTAAAATA+TGG | - | chr8_4:5124180-5124199 | None:intergenic | 20.0% |
| !!! | TGATTTTATGACTTCATATT+TGG | + | chr8_4:5124346-5124365 | Msa1308770:intron | 20.0% |
| !!! | AATGACATTCTAGAATTATA+AGG | + | chr8_4:5124448-5124467 | Msa1308770:intron | 20.0% |
| !!! | AATATTTATCCTTTTGTGAT+GGG | - | chr8_4:5124700-5124719 | None:intergenic | 20.0% |
| !!! | AAATATTTATCCTTTTGTGA+TGG | - | chr8_4:5124701-5124720 | None:intergenic | 20.0% |
| !!! | AAAGGATAAATATTTTTCAG+AGG | + | chr8_4:5124706-5124725 | Msa1308770:intron | 20.0% |
| !! | GTTCAAAATTTGAACATATA+TGG | - | chr8_4:5124751-5124770 | None:intergenic | 20.0% |
| !!! | TTCAAATTTCAAAGAGATTT+TGG | + | chr8_4:5124999-5125018 | Msa1308770:CDS | 20.0% |
| !!! | TCAAATTTCAAAGAGATTTT+GGG | + | chr8_4:5125000-5125019 | Msa1308770:CDS | 20.0% |
| !! | AGAATTGCATACTATTTAAT+TGG | + | chr8_4:5125072-5125091 | Msa1308770:intron | 20.0% |
| !! | TTACTAGTATATACTTACAT+TGG | + | chr8_4:5125154-5125173 | Msa1308770:intron | 20.0% |
| !!! | CATTTTTTCTTTAACATCTT+TGG | + | chr8_4:5125193-5125212 | Msa1308770:intron | 20.0% |
| !!! | TTTGATCTCTGAAAATTAAA+GGG | - | chr8_4:5125436-5125455 | None:intergenic | 20.0% |
| !! | ACATTATATCAACCAAAAAT+GGG | - | chr8_4:5125793-5125812 | None:intergenic | 20.0% |
| !! | TACATTATATCAACCAAAAA+TGG | - | chr8_4:5125794-5125813 | None:intergenic | 20.0% |
| !! | AACTATAGTGCAAATAAAAA+TGG | + | chr8_4:5126157-5126176 | Msa1308770:intron | 20.0% |
| !! | TTTGTCAATGATTTGATTAA+TGG | + | chr8_4:5126238-5126257 | Msa1308770:intron | 20.0% |
| !! | TTGTCAATGATTTGATTAAT+GGG | + | chr8_4:5126239-5126258 | Msa1308770:intron | 20.0% |
| !! | AATTAAAGATGTGCTTATTT+AGG | + | chr8_4:5126278-5126297 | Msa1308770:intron | 20.0% |
| !! | ATAAATGAAATAAATGAGCA+AGG | - | chr8_4:5126631-5126650 | None:intergenic | 20.0% |
| !! | ATATCTTCATTCATTATCTA+TGG | + | chr8_4:5127560-5127579 | Msa1308770:intron | 20.0% |
| !! | TATCTTCATTCATTATCTAT+GGG | + | chr8_4:5127561-5127580 | Msa1308770:intron | 20.0% |
| !! | AGAAATTTAAATGCATATCT+AGG | + | chr8_4:5127843-5127862 | Msa1308770:intron | 20.0% |
| !! | TAGAAAAACATATTGTATTC+GGG | - | chr8_4:5128014-5128033 | None:intergenic | 20.0% |
| !! | GTAGAAAAACATATTGTATT+CGG | - | chr8_4:5128015-5128034 | None:intergenic | 20.0% |
| !! | TAAATAGAGAAAATTTCTCA+GGG | - | chr8_4:5128484-5128503 | None:intergenic | 20.0% |
| !! | TTAAATAGAGAAAATTTCTC+AGG | - | chr8_4:5128485-5128504 | None:intergenic | 20.0% |
| ! | TAGAAATTCAGAATCGAAAT+TGG | - | chr8_4:5120996-5121015 | None:intergenic | 25.0% |
| !!! | TATTTCGTAATGTTTGTTGT+GGG | + | chr8_4:5121061-5121080 | Msa1308770:intron | 25.0% |
| ! | CAATTTATCAAACAGGTAAT+GGG | - | chr8_4:5121138-5121157 | None:intergenic | 25.0% |
| ! | TTCAGACAAAAGTGAAAAAT+GGG | - | chr8_4:5121209-5121228 | None:intergenic | 25.0% |
| ! | ATTCAGACAAAAGTGAAAAA+TGG | - | chr8_4:5121210-5121229 | None:intergenic | 25.0% |
| ! | TATTGAAACTTATCATGTTG+TGG | + | chr8_4:5121266-5121285 | Msa1308770:intron | 25.0% |
| !! | ATTATTTTCCTAGTCATACA+AGG | - | chr8_4:5121353-5121372 | None:intergenic | 25.0% |
| ! | TAATTCTTTGATCGGAAAAT+GGG | + | chr8_4:5121398-5121417 | Msa1308770:intron | 25.0% |
| ! | GCTTATACATAAATGCTTAT+AGG | + | chr8_4:5121567-5121586 | Msa1308770:intron | 25.0% |
| !!! | CTACAAGTTCTTTTTTTAGA+AGG | - | chr8_4:5121714-5121733 | None:intergenic | 25.0% |
| ! | TATGCTATAAACGTTCAATT+AGG | + | chr8_4:5121743-5121762 | Msa1308770:intron | 25.0% |
| !! | AGATTTAAACCAGAATTTTC+AGG | - | chr8_4:5121997-5122016 | None:intergenic | 25.0% |
| ! | GAAGGAATCAATTTCTATAA+AGG | - | chr8_4:5122155-5122174 | None:intergenic | 25.0% |
| ! | GAAAGAAAAAAAAGAATGGA+AGG | - | chr8_4:5122173-5122192 | None:intergenic | 25.0% |
| !!! | TTCTTTTTGTTCTTTGAAGT+TGG | + | chr8_4:5122190-5122209 | Msa1308770:intron | 25.0% |
| !!! | GTTTTTACTGACTATACAAA+AGG | - | chr8_4:5122218-5122237 | None:intergenic | 25.0% |
| ! | AATGAAGAGTCTAATTCTTA+TGG | + | chr8_4:5122248-5122267 | Msa1308770:CDS | 25.0% |
| ! | TAATTCTTATGGAAATGCTA+CGG | + | chr8_4:5122259-5122278 | Msa1308770:CDS | 25.0% |
| ! | TTCATAAAAGTAGAATGGTA+AGG | - | chr8_4:5122747-5122766 | None:intergenic | 25.0% |
| !! | CACTTTTCATAAAAGTAGAA+TGG | - | chr8_4:5122752-5122771 | None:intergenic | 25.0% |
| ! | GTCATTCAAAATTGTTAGAA+AGG | + | chr8_4:5122791-5122810 | Msa1308770:intron | 25.0% |
| ! | ATAATTGCTCAAAATTTGGA+AGG | + | chr8_4:5122869-5122888 | Msa1308770:intron | 25.0% |
| ! | TAATTGCTCAAAATTTGGAA+GGG | + | chr8_4:5122870-5122889 | Msa1308770:intron | 25.0% |
| !! | ATATTGATTAACATGAACAC+AGG | - | chr8_4:5122982-5123001 | None:intergenic | 25.0% |
| ! | ATGTTAATCAATATACCATG+TGG | + | chr8_4:5122988-5123007 | Msa1308770:intron | 25.0% |
| ! | CTTCATTTAACAATGAAAAC+TGG | - | chr8_4:5123327-5123346 | None:intergenic | 25.0% |
| ! | TCATTGTTAAATGAAGAATC+TGG | + | chr8_4:5123331-5123350 | Msa1308770:CDS | 25.0% |
| ! | AAAGTATAGTTTCTCTTGTT+TGG | - | chr8_4:5123428-5123447 | None:intergenic | 25.0% |
| !! | AACAAGAGAAACTATACTTT+TGG | + | chr8_4:5123428-5123447 | Msa1308770:CDS | 25.0% |
| ! | TAAACAAAGTTCAATGTTGT+CGG | - | chr8_4:5123566-5123585 | None:intergenic | 25.0% |
| !! | ATTGTTTTCAGTTGCTTAAA+AGG | + | chr8_4:5123768-5123787 | Msa1308770:intron | 25.0% |
| ! | GAACCAAGATAAAAAGATAA+AGG | + | chr8_4:5123790-5123809 | Msa1308770:intron | 25.0% |
| ! | ATAACGACTCTAATTATACA+GGG | - | chr8_4:5124019-5124038 | None:intergenic | 25.0% |
| ! | GAAATATACATATTGAGGTA+CGG | - | chr8_4:5124156-5124175 | None:intergenic | 25.0% |
| ! | ATGGTGAAATATACATATTG+AGG | - | chr8_4:5124161-5124180 | None:intergenic | 25.0% |
| !!! | TCACCATATTTTAGATATTC+TGG | + | chr8_4:5124174-5124193 | Msa1308770:intron | 25.0% |
| !! | TTTAATGCTGATTAATCCTA+AGG | + | chr8_4:5124795-5124814 | Msa1308770:intron | 25.0% |
| !! | TGCATACAAGTATTTTATCT+AGG | + | chr8_4:5124944-5124963 | Msa1308770:intron | 25.0% |
| !! | CAAATTTCAAAGAGATTTTG+GGG | + | chr8_4:5125001-5125020 | Msa1308770:CDS | 25.0% |
| !! | TTGATCTCTGAAAATTAAAG+GGG | - | chr8_4:5125435-5125454 | None:intergenic | 25.0% |
| !! | CTTTGATCTCTGAAAATTAA+AGG | - | chr8_4:5125437-5125456 | None:intergenic | 25.0% |
| ! | ATGCCTATAATTGATAGAAT+GGG | + | chr8_4:5125863-5125882 | Msa1308770:intron | 25.0% |
| ! | AAACCCATTCTATCAATTAT+AGG | - | chr8_4:5125869-5125888 | None:intergenic | 25.0% |
| ! | CAAAGAAATCATATTTCGTA+TGG | - | chr8_4:5126222-5126241 | None:intergenic | 25.0% |
| ! | TGTCAATGATTTGATTAATG+GGG | + | chr8_4:5126240-5126259 | Msa1308770:intron | 25.0% |
| ! | TAAAACTAGATAGCAATCAA+AGG | - | chr8_4:5126715-5126734 | None:intergenic | 25.0% |
| ! | ATGTAAACTACAAACATGAA+AGG | - | chr8_4:5126858-5126877 | None:intergenic | 25.0% |
| ! | ATTGAAAGGCAAGATAAAAT+TGG | + | chr8_4:5126957-5126976 | Msa1308770:intron | 25.0% |
| ! | AATAATATAACATCCCTATG+AGG | + | chr8_4:5127111-5127130 | Msa1308770:intron | 25.0% |
| !! | TAAATTATAGTCTTGATCGT+TGG | + | chr8_4:5127197-5127216 | Msa1308770:intron | 25.0% |
| ! | AACAATTTCATGAAAAGTCT+CGG | - | chr8_4:5127612-5127631 | None:intergenic | 25.0% |
| ! | AAAGGGATCAAAATTAACTT+TGG | - | chr8_4:5127721-5127740 | None:intergenic | 25.0% |
| ! | ATCTATAACCAAGGTAAAAA+GGG | - | chr8_4:5127738-5127757 | None:intergenic | 25.0% |
| !!! | ACTTTGTTTTACTCCTAATT+AGG | - | chr8_4:5127885-5127904 | None:intergenic | 25.0% |
| ! | TATAAATGTAAATGTGGCTT+TGG | - | chr8_4:5127987-5128006 | None:intergenic | 25.0% |
| ! | GGAATCTATAAATGTAAATG+TGG | - | chr8_4:5127993-5128012 | None:intergenic | 25.0% |
| !!! | CTATAGTAAGTTGTTTTAGA+TGG | + | chr8_4:5128034-5128053 | Msa1308770:intron | 25.0% |
| !!! | TAATGTTGTTCGTTTTAAAC+AGG | + | chr8_4:5128058-5128077 | Msa1308770:intron | 25.0% |
| ! | CTTATCTAGATTACTTAATC+AGG | + | chr8_4:5128356-5128375 | Msa1308770:intron | 25.0% |
| ! | GCTATACATCAATAATGTAT+CGG | - | chr8_4:5128855-5128874 | None:intergenic | 25.0% |
| !! | TGTTTCTTGTTTCATACTAT+AGG | - | chr8_4:5128877-5128896 | None:intergenic | 25.0% |
| ! | AACAGTAACACAATGGTTTT+GGG | + | chr8_4:5120964-5120983 | Msa1308770:five_prime_UTR | 30.0% |
| ! | TTCTGAAAGCTGATTCAAAA+AGG | + | chr8_4:5121017-5121036 | Msa1308770:five_prime_UTR | 30.0% |
| !! | AAAAAGGTATTTGTCTACAC+TGG | + | chr8_4:5121033-5121052 | Msa1308770:intron | 30.0% |
| ! | CTATTTCGTAATGTTTGTTG+TGG | + | chr8_4:5121060-5121079 | Msa1308770:intron | 30.0% |
| AACAAAAACTGAACACAGAT+CGG | - | chr8_4:5121106-5121125 | None:intergenic | 30.0% | |
| GCAATTTATCAAACAGGTAA+TGG | - | chr8_4:5121139-5121158 | None:intergenic | 30.0% | |
| GAATTGGCAATTTATCAAAC+AGG | - | chr8_4:5121145-5121164 | None:intergenic | 30.0% | |
| TAAATGATGATTTGAGCTTC+CGG | + | chr8_4:5121294-5121313 | Msa1308770:intron | 30.0% | |
| GTAATTCTTTGATCGGAAAA+TGG | + | chr8_4:5121397-5121416 | Msa1308770:intron | 30.0% | |
| AATTCTTTGATCGGAAAATG+GGG | + | chr8_4:5121399-5121418 | Msa1308770:intron | 30.0% | |
| GTTATTGAGTATAAGTAACG+TGG | + | chr8_4:5121598-5121617 | Msa1308770:intron | 30.0% | |
| ACTAATCAAAGCATACAGAA+TGG | - | chr8_4:5121672-5121691 | None:intergenic | 30.0% | |
| TTCTGTATGCTTTGATTAGT+TGG | + | chr8_4:5121672-5121691 | Msa1308770:intron | 30.0% | |
| AAATAAACTCATGAGTAACG+AGG | - | chr8_4:5121924-5121943 | None:intergenic | 30.0% | |
| CTGGTTTAAATCTGTTATGT+AGG | + | chr8_4:5122004-5122023 | Msa1308770:intron | 30.0% | |
| AATTCTTATGGAAATGCTAC+GGG | + | chr8_4:5122260-5122279 | Msa1308770:CDS | 30.0% | |
| ATTCCATATCAACATAGTGT+GGG | + | chr8_4:5122438-5122457 | Msa1308770:intron | 30.0% | |
| ! | ATGTGTTGATGAACATGTTA+AGG | + | chr8_4:5122954-5122973 | Msa1308770:intron | 30.0% |
| ! | TGTGTTGATGAACATGTTAA+GGG | + | chr8_4:5122955-5122974 | Msa1308770:intron | 30.0% |
| CATGTTAAAGCAAGAAAAGA+AGG | - | chr8_4:5123014-5123033 | None:intergenic | 30.0% | |
| GTTGTTGAGAAATAATAACC+TGG | + | chr8_4:5123150-5123169 | Msa1308770:intron | 30.0% | |
| TAGAAGAAGCAACAAAACAT+GGG | - | chr8_4:5123246-5123265 | None:intergenic | 30.0% | |
| TTAGAAGAAGCAACAAAACA+TGG | - | chr8_4:5123247-5123266 | None:intergenic | 30.0% | |
| TTTAACAATGAAAACTGGGA+TGG | - | chr8_4:5123322-5123341 | None:intergenic | 30.0% | |
| AAATGAAGAATCTGGCATTT+CGG | + | chr8_4:5123339-5123358 | Msa1308770:CDS | 30.0% | |
| TTGGAACAGAGATCATAAAT+TGG | + | chr8_4:5123447-5123466 | Msa1308770:CDS | 30.0% | |
| TGGAACAGAGATCATAAATT+GGG | + | chr8_4:5123448-5123467 | Msa1308770:CDS | 30.0% | |
| TGTTTAGCAGCTCTATATAA+CGG | - | chr8_4:5123496-5123515 | None:intergenic | 30.0% | |
| TGCTAAACATGCATTTATGA+CGG | + | chr8_4:5123507-5123526 | Msa1308770:CDS | 30.0% | |
| GCGTTTAAACAATACAAGAT+GGG | + | chr8_4:5123529-5123548 | Msa1308770:CDS | 30.0% | |
| ! | TCAAAAGTATGCTTTCAAGA+TGG | - | chr8_4:5123609-5123628 | None:intergenic | 30.0% |
| TTGTAGTCAACATCATAAGT+TGG | + | chr8_4:5123733-5123752 | Msa1308770:intron | 30.0% | |
| ! | GAGCCTTTATCTTTTTATCT+TGG | - | chr8_4:5123796-5123815 | None:intergenic | 30.0% |
| ! | ACAACCAGCATAATTGTTTT+GGG | - | chr8_4:5123873-5123892 | None:intergenic | 30.0% |
| CATAACGACTCTAATTATAC+AGG | - | chr8_4:5124020-5124039 | None:intergenic | 30.0% | |
| GATAACAATTGAACGAGTTT+AGG | - | chr8_4:5124108-5124127 | None:intergenic | 30.0% | |
| !! | TCTGGATTAGTTCATAAAAG+CGG | + | chr8_4:5124192-5124211 | Msa1308770:intron | 30.0% |
| ! | AATGATTATGTCTTTTCCTG+TGG | + | chr8_4:5124225-5124244 | Msa1308770:intron | 30.0% |
| !! | CATTAGTGTGATTTGTTTGT+AGG | + | chr8_4:5124318-5124337 | Msa1308770:intron | 30.0% |
| ! | AGTACTCTTCTGGAAAATAT+CGG | - | chr8_4:5124830-5124849 | None:intergenic | 30.0% |
| GAACATATATAGTACTCTTC+TGG | - | chr8_4:5124840-5124859 | None:intergenic | 30.0% | |
| ! | AAGTATTTTATCTAGGCGAT+GGG | + | chr8_4:5124951-5124970 | Msa1308770:intron | 30.0% |
| CTAATGCTCATTTAGTTGAT+TGG | + | chr8_4:5125104-5125123 | Msa1308770:intron | 30.0% | |
| !!! | ACAGAACATGTCTTGTTTTT+TGG | - | chr8_4:5125302-5125321 | None:intergenic | 30.0% |
| ! | AATACTTCACCTTTTTGTCA+TGG | + | chr8_4:5125342-5125361 | Msa1308770:intron | 30.0% |
| GGGTAAAAACGATGAAAAAT+GGG | - | chr8_4:5125415-5125434 | None:intergenic | 30.0% | |
| ACTTGTATGTATCACAATTC+TGG | + | chr8_4:5125555-5125574 | Msa1308770:intron | 30.0% | |
| ACTACAGTACATAATCGTTT+AGG | - | chr8_4:5125654-5125673 | None:intergenic | 30.0% | |
| GATGAGGTTAATATGACAAT+TGG | - | chr8_4:5125765-5125784 | None:intergenic | 30.0% | |
| CATGCCTATAATTGATAGAA+TGG | + | chr8_4:5125862-5125881 | Msa1308770:intron | 30.0% | |
| TGGATGAAAAAAGTAATCCA+CGG | - | chr8_4:5125970-5125989 | None:intergenic | 30.0% | |
| AAACTATAACCATCAGTATC+AGG | - | chr8_4:5126406-5126425 | None:intergenic | 30.0% | |
| AAGATAAAATTGGAGCAAGA+AGG | + | chr8_4:5126967-5126986 | Msa1308770:intron | 30.0% | |
| TTTGTAGCAACTCATTAGTT+TGG | - | chr8_4:5127043-5127062 | None:intergenic | 30.0% | |
| AGAACCCATCAATATATACT+TGG | + | chr8_4:5127083-5127102 | Msa1308770:intron | 30.0% | |
| ! | ACATTGATAAAGCGTTATGT+CGG | + | chr8_4:5127427-5127446 | Msa1308770:CDS | 30.0% |
| TAGTAAGCTTAAGTCTTACA+TGG | + | chr8_4:5127514-5127533 | Msa1308770:intron | 30.0% | |
| ATGAAATTGTTGTATGTGAC+CGG | + | chr8_4:5127621-5127640 | Msa1308770:intron | 30.0% | |
| GAAAACTTCTGTATAACTCT+AGG | + | chr8_4:5127689-5127708 | Msa1308770:intron | 30.0% | |
| !! | ATTTTGATCCCTTTTTACCT+TGG | + | chr8_4:5127727-5127746 | Msa1308770:intron | 30.0% |
| CATCTATAACCAAGGTAAAA+AGG | - | chr8_4:5127739-5127758 | None:intergenic | 30.0% | |
| AATAAGCACATCTATAACCA+AGG | - | chr8_4:5127747-5127766 | None:intergenic | 30.0% | |
| GTGCTTATTGAACAAATACA+TGG | + | chr8_4:5127758-5127777 | Msa1308770:intron | 30.0% | |
| AAAATTATTTATCCAGCACG+TGG | - | chr8_4:5128111-5128130 | None:intergenic | 30.0% | |
| TTTCTAACTGATACTAGTGA+CGG | + | chr8_4:5128128-5128147 | Msa1308770:CDS | 30.0% | |
| ACATAATTCATTCTGCAGAA+AGG | - | chr8_4:5128201-5128220 | None:intergenic | 30.0% | |
| TATGTAACTAGCAGAATATG+TGG | - | chr8_4:5128279-5128298 | None:intergenic | 30.0% | |
| ATTCTGCTAGTTACATACTT+TGG | + | chr8_4:5128282-5128301 | Msa1308770:CDS | 30.0% | |
| TTACATACTTTGGTTGAAAG+TGG | + | chr8_4:5128292-5128311 | Msa1308770:CDS | 30.0% | |
| ! | AGTTTTTCCTTGCAAGTTTT+TGG | + | chr8_4:5128646-5128665 | Msa1308770:three_prime_UTR | 30.0% |
| ! | GTTTTTCCTTGCAAGTTTTT+GGG | + | chr8_4:5128647-5128666 | Msa1308770:three_prime_UTR | 30.0% |
| TGTAAGTTGTAGCACAAAAT+AGG | + | chr8_4:5128742-5128761 | Msa1308770:three_prime_UTR | 30.0% | |
| TAGAACGAACAGTAACACAA+TGG | + | chr8_4:5120957-5120976 | Msa1308770:five_prime_UTR | 35.0% | |
| ! | GAACAGTAACACAATGGTTT+TGG | + | chr8_4:5120963-5120982 | Msa1308770:five_prime_UTR | 35.0% |
| TATCCTACAGAAGGAAGAAT+TGG | - | chr8_4:5121161-5121180 | None:intergenic | 35.0% | |
| ACTTTACACTATCCTACAGA+AGG | - | chr8_4:5121170-5121189 | None:intergenic | 35.0% | |
| CTGTAGGATAGTGTAAAGTT+TGG | + | chr8_4:5121171-5121190 | Msa1308770:intron | 35.0% | |
| AAATGATGATTTGAGCTTCC+GGG | + | chr8_4:5121295-5121314 | Msa1308770:intron | 35.0% | |
| ! | AAAATGGGGTTTGTTTGGAT+TGG | + | chr8_4:5121413-5121432 | Msa1308770:intron | 35.0% |
| TTGAGTTTATCTGCTAGCAT+AGG | + | chr8_4:5121441-5121460 | Msa1308770:intron | 35.0% | |
| TGAGTATAAGTAACGTGGTT+TGG | + | chr8_4:5121603-5121622 | Msa1308770:intron | 35.0% | |
| ATTAGGCTGTTTATCCAAAC+AGG | + | chr8_4:5121760-5121779 | Msa1308770:intron | 35.0% | |
| TTAGGCTGTTTATCCAAACA+GGG | + | chr8_4:5121761-5121780 | Msa1308770:intron | 35.0% | |
| ! | TATTACATGAGGGTATGGAA+TGG | - | chr8_4:5121833-5121852 | None:intergenic | 35.0% |
| GTACATATTACATGAGGGTA+TGG | - | chr8_4:5121838-5121857 | None:intergenic | 35.0% | |
| ATTGTTCTAATAGGATGTGC+TGG | + | chr8_4:5122043-5122062 | Msa1308770:intron | 35.0% | |
| AAGTCTGATGCTCTAATGTA+AGG | + | chr8_4:5122311-5122330 | Msa1308770:intron | 35.0% | |
| CATTCCATATCAACATAGTG+TGG | + | chr8_4:5122437-5122456 | Msa1308770:intron | 35.0% | |
| TTCCATATCAACATAGTGTG+GGG | + | chr8_4:5122439-5122458 | Msa1308770:intron | 35.0% | |
| GTAATATGTTGCTACACACA+TGG | + | chr8_4:5122499-5122518 | Msa1308770:intron | 35.0% | |
| TACACACATGGTATTCTCTT+AGG | + | chr8_4:5122511-5122530 | Msa1308770:intron | 35.0% | |
| ATATGTTGATCCAACACACT+TGG | - | chr8_4:5122817-5122836 | None:intergenic | 35.0% | |
| ! | CTCTAAGAAGTCTTAAGAGT+AGG | + | chr8_4:5123119-5123138 | Msa1308770:intron | 35.0% |
| GAACGAATTGATTGCTAAGA+GGG | - | chr8_4:5123191-5123210 | None:intergenic | 35.0% | |
| TGAACGAATTGATTGCTAAG+AGG | - | chr8_4:5123192-5123211 | None:intergenic | 35.0% | |
| TCTTAGCAATCAATTCGTTC+AGG | + | chr8_4:5123191-5123210 | Msa1308770:intron | 35.0% | |
| ! | CACGTTTTCCCTTATTCTTT+TGG | + | chr8_4:5123268-5123287 | Msa1308770:intron | 35.0% |
| CACTGGATCCAAAAGAATAA+GGG | - | chr8_4:5123279-5123298 | None:intergenic | 35.0% | |
| TCACTGGATCCAAAAGAATA+AGG | - | chr8_4:5123280-5123299 | None:intergenic | 35.0% | |
| GGCGTTTAAACAATACAAGA+TGG | + | chr8_4:5123528-5123547 | Msa1308770:CDS | 35.0% | |
| TATGCTTTCAAGATGGTCAT+GGG | - | chr8_4:5123602-5123621 | None:intergenic | 35.0% | |
| ! | AAAGGCTCATAGTTGATTCT+TGG | + | chr8_4:5123808-5123827 | Msa1308770:intron | 35.0% |
| ! | AGATTTTCCTGCTAACTGTA+GGG | - | chr8_4:5123839-5123858 | None:intergenic | 35.0% |
| ! | AAGATTTTCCTGCTAACTGT+AGG | - | chr8_4:5123840-5123859 | None:intergenic | 35.0% |
| TTCTCCCAAAACAATTATGC+TGG | + | chr8_4:5123866-5123885 | Msa1308770:intron | 35.0% | |
| ! | CACAACCAGCATAATTGTTT+TGG | - | chr8_4:5123874-5123893 | None:intergenic | 35.0% |
| ! | CAAAACAATTATGCTGGTTG+TGG | + | chr8_4:5123872-5123891 | Msa1308770:intron | 35.0% |
| ! | ATGTCATAGGTTTTCTGCTA+GGG | - | chr8_4:5123925-5123944 | None:intergenic | 35.0% |
| TAGCAGAAAACCTATGACAT+GGG | + | chr8_4:5123925-5123944 | Msa1308770:intron | 35.0% | |
| AACAATTGAACGAGTTTAGG+AGG | - | chr8_4:5124105-5124124 | None:intergenic | 35.0% | |
| GGCAAGAAAACATACGAAAA+TGG | + | chr8_4:5124469-5124488 | Msa1308770:intron | 35.0% | |
| TTTCTGCAATATGCACAAAC+AGG | - | chr8_4:5124537-5124556 | None:intergenic | 35.0% | |
| ATTAGTGTCTAAGAAGAAGC+AGG | + | chr8_4:5124560-5124579 | Msa1308770:CDS | 35.0% | |
| !! | TTTAGTACCGATTGATCTGA+AGG | + | chr8_4:5124896-5124915 | Msa1308770:intron | 35.0% |
| !!! | GAAGGTTTTGGGACATTAAT+AGG | + | chr8_4:5124914-5124933 | Msa1308770:intron | 35.0% |
| ! | CAAGTATTTTATCTAGGCGA+TGG | + | chr8_4:5124950-5124969 | Msa1308770:intron | 35.0% |
| TCTGAACTGAATTTAGACCT+CGG | - | chr8_4:5125055-5125074 | None:intergenic | 35.0% | |
| GTAACAATTATCCTTCGCTT+GGG | - | chr8_4:5125138-5125157 | None:intergenic | 35.0% | |
| AGTAACAATTATCCTTCGCT+TGG | - | chr8_4:5125139-5125158 | None:intergenic | 35.0% | |
| ACAAAACGTTATCTCACTGA+AGG | + | chr8_4:5125261-5125280 | Msa1308770:intron | 35.0% | |
| CAAAACGTTATCTCACTGAA+GGG | + | chr8_4:5125262-5125281 | Msa1308770:intron | 35.0% | |
| ACTGAAGGGAAAAAGATAGA+GGG | + | chr8_4:5125276-5125295 | Msa1308770:intron | 35.0% | |
| ! | ACCTTTTTGTCATGGAGATT+AGG | + | chr8_4:5125350-5125369 | Msa1308770:intron | 35.0% |
| TCCTAATCTCCATGACAAAA+AGG | - | chr8_4:5125354-5125373 | None:intergenic | 35.0% | |
| ! | GTGTTTAGCTCAAAATATGC+TGG | - | chr8_4:5125393-5125412 | None:intergenic | 35.0% |
| GGGGTAAAAACGATGAAAAA+TGG | - | chr8_4:5125416-5125435 | None:intergenic | 35.0% | |
| CAAAGATGAATTATCGTGCT+TGG | + | chr8_4:5125452-5125471 | Msa1308770:CDS | 35.0% | |
| CTCATACATGACTAAAGAAC+AGG | + | chr8_4:5125495-5125514 | Msa1308770:CDS | 35.0% | |
| ATTTCGTGACTTATTGCTAG+TGG | - | chr8_4:5125609-5125628 | None:intergenic | 35.0% | |
| TTGTGTTCTTGTGTAGTTGT+TGG | + | chr8_4:5125720-5125739 | Msa1308770:intron | 35.0% | |
| ! | TGTTGGTTAACCTTAGTTGT+TGG | + | chr8_4:5125737-5125756 | Msa1308770:intron | 35.0% |
| ATGAAAAAAGTAATCCACGG+GGG | - | chr8_4:5125967-5125986 | None:intergenic | 35.0% | |
| GATGAAAAAAGTAATCCACG+GGG | - | chr8_4:5125968-5125987 | None:intergenic | 35.0% | |
| GGATGAAAAAAGTAATCCAC+GGG | - | chr8_4:5125969-5125988 | None:intergenic | 35.0% | |
| TTCATCCAAAATCTCTGTTG+AGG | + | chr8_4:5125982-5126001 | Msa1308770:intron | 35.0% | |
| ! | TTTGACCTCAACAGAGATTT+TGG | - | chr8_4:5125990-5126009 | None:intergenic | 35.0% |
| AGTTGAAGAAATCCAGAAGT+TGG | + | chr8_4:5126310-5126329 | Msa1308770:CDS | 35.0% | |
| GTTGAAGAAATCCAGAAGTT+GGG | + | chr8_4:5126311-5126330 | Msa1308770:CDS | 35.0% | |
| TTGTTTGAACCTGATACTGA+TGG | + | chr8_4:5126394-5126413 | Msa1308770:intron | 35.0% | |
| GTTACTGCAGAAAATTATGG+AGG | + | chr8_4:5126530-5126549 | Msa1308770:CDS | 35.0% | |
| TTATATTGTCCAAGCAGTGA+AGG | + | chr8_4:5126596-5126615 | Msa1308770:CDS | 35.0% | |
| CTATTATTACCTTCACTGCT+TGG | - | chr8_4:5126608-5126627 | None:intergenic | 35.0% | |
| ATCAAAGGTCCTTCAATCTT+AGG | - | chr8_4:5126700-5126719 | None:intergenic | 35.0% | |
| !! | ATTGTGCTGAATTTTCTAGC+AGG | - | chr8_4:5126804-5126823 | None:intergenic | 35.0% |
| CCAGCCAAGTATATATTGAT+GGG | - | chr8_4:5127090-5127109 | None:intergenic | 35.0% | |
| TCCAGCCAAGTATATATTGA+TGG | - | chr8_4:5127091-5127110 | None:intergenic | 35.0% | |
| ! | TGTGACAGTTATGATTTGTC+AGG | + | chr8_4:5127384-5127403 | Msa1308770:intron | 35.0% |
| ! | CATTGATAAAGCGTTATGTC+GGG | + | chr8_4:5127428-5127447 | Msa1308770:CDS | 35.0% |
| AGCTTAAGTCTTACATGGAT+CGG | + | chr8_4:5127519-5127538 | Msa1308770:intron | 35.0% | |
| ATGCATATCTAGGAAACACA+CGG | + | chr8_4:5127853-5127872 | Msa1308770:intron | 35.0% | |
| !! | ATGTAAATGTGGCTTTGGTA+GGG | - | chr8_4:5127982-5128001 | None:intergenic | 35.0% |
| !! | AATGTAAATGTGGCTTTGGT+AGG | - | chr8_4:5127983-5128002 | None:intergenic | 35.0% |
| !! | TTCGTTTTAAACAGGCTCTA+TGG | + | chr8_4:5128066-5128085 | Msa1308770:intron | 35.0% |
| !! | ACTTTTGCTGATGACGATTA+TGG | + | chr8_4:5128236-5128255 | Msa1308770:CDS | 35.0% |
| !! | CTTTTGCTGATGACGATTAT+GGG | + | chr8_4:5128237-5128256 | Msa1308770:CDS | 35.0% |
| !! | TTTTGCTGATGACGATTATG+GGG | + | chr8_4:5128238-5128257 | Msa1308770:CDS | 35.0% |
| GTCTCAAAATGGAAAGTCTA+GGG | - | chr8_4:5128334-5128353 | None:intergenic | 35.0% | |
| AGTCTCAAAATGGAAAGTCT+AGG | - | chr8_4:5128335-5128354 | None:intergenic | 35.0% | |
| CTAGATAAGCAGTCTCAAAA+TGG | - | chr8_4:5128345-5128364 | None:intergenic | 35.0% | |
| CTACATCTCTTATCTTCTCA+AGG | - | chr8_4:5128433-5128452 | None:intergenic | 35.0% | |
| TGTAGATTTGAAGACCTTAC+TGG | + | chr8_4:5128448-5128467 | Msa1308770:CDS | 35.0% | |
| TATTTGCACAAATCACTCGT+CGG | - | chr8_4:5128713-5128732 | None:intergenic | 35.0% | |
| ! | GTGCTTTTCACACATAACAT+TGG | - | chr8_4:5128816-5128835 | None:intergenic | 35.0% |
| TTGCCAATTCTTCCTTCTGT+AGG | + | chr8_4:5121155-5121174 | Msa1308770:intron | 40.0% | |
| !! | TAGTCATACAAGGTACTGTC+AGG | - | chr8_4:5121343-5121362 | None:intergenic | 40.0% |
| TGACAGTACCTTGTATGACT+AGG | + | chr8_4:5121342-5121361 | Msa1308770:intron | 40.0% | |
| ! | ATCGGAAAATGGGGTTTGTT+TGG | + | chr8_4:5121408-5121427 | Msa1308770:intron | 40.0% |
| TAGGCAATTGTGAGGATGTT+TGG | + | chr8_4:5121460-5121479 | Msa1308770:intron | 40.0% | |
| AATGTTGACACACTTCCACA+TGG | + | chr8_4:5121885-5121904 | Msa1308770:intron | 40.0% | |
| GGTAAGTACATATCTCCATG+TGG | - | chr8_4:5121903-5121922 | None:intergenic | 40.0% | |
| ! | TTTGTGGGTTTTGCGACATT+TGG | + | chr8_4:5122391-5122410 | Msa1308770:intron | 40.0% |
| GCTCCGTTTAAGAGTTTCAA+GGG | + | chr8_4:5122533-5122552 | Msa1308770:intron | 40.0% | |
| CTCCGTTTAAGAGTTTCAAG+GGG | + | chr8_4:5122534-5122553 | Msa1308770:intron | 40.0% | |
| TCCGTTTAAGAGTTTCAAGG+GGG | + | chr8_4:5122535-5122554 | Msa1308770:intron | 40.0% | |
| TCCCCCTTGAAACTCTTAAA+CGG | - | chr8_4:5122539-5122558 | None:intergenic | 40.0% | |
| TCTGTTTGTGAGTCTAGAAG+GGG | - | chr8_4:5122723-5122742 | None:intergenic | 40.0% | |
| CTCTGTTTGTGAGTCTAGAA+GGG | - | chr8_4:5122724-5122743 | None:intergenic | 40.0% | |
| !! | CGTTTTGAGCAAATGTGCTA+AGG | + | chr8_4:5122905-5122924 | Msa1308770:intron | 40.0% |
| ! | CTGTTTGCTGATTGATGTAC+GGG | - | chr8_4:5123382-5123401 | None:intergenic | 40.0% |
| ! | CCTGTTTGCTGATTGATGTA+CGG | - | chr8_4:5123383-5123402 | None:intergenic | 40.0% |
| CGTACATCAATCAGCAAACA+GGG | + | chr8_4:5123381-5123400 | Msa1308770:CDS | 40.0% | |
| GTATGCTTTCAAGATGGTCA+TGG | - | chr8_4:5123603-5123622 | None:intergenic | 40.0% | |
| TTATGACTGCTTGGAATTGC+AGG | + | chr8_4:5123665-5123684 | Msa1308770:CDS | 40.0% | |
| ! | CATGTCATAGGTTTTCTGCT+AGG | - | chr8_4:5123926-5123945 | None:intergenic | 40.0% |
| CTAGCAGAAAACCTATGACA+TGG | + | chr8_4:5123924-5123943 | Msa1308770:intron | 40.0% | |
| ACACAAGAAACCCATGTCAT+AGG | - | chr8_4:5123938-5123957 | None:intergenic | 40.0% | |
| !!! | AATCACAGTTTTGACTCCAC+AGG | - | chr8_4:5124244-5124263 | None:intergenic | 40.0% |
| !! | CTCCAAGCTTGTTCACTTTT+GGG | - | chr8_4:5124639-5124658 | None:intergenic | 40.0% |
| !! | ACTCCAAGCTTGTTCACTTT+TGG | - | chr8_4:5124640-5124659 | None:intergenic | 40.0% |
| TATGTAGCAGTTTCCCCTTA+TGG | + | chr8_4:5124671-5124690 | Msa1308770:intron | 40.0% | |
| ! | TTTGTGATGGGAAGCCATAA+GGG | - | chr8_4:5124688-5124707 | None:intergenic | 40.0% |
| !! | TTTTGTGATGGGAAGCCATA+AGG | - | chr8_4:5124689-5124708 | None:intergenic | 40.0% |
| TTATGGCTTCCCATCACAAA+AGG | + | chr8_4:5124688-5124707 | Msa1308770:intron | 40.0% | |
| ATATCGGCGTTCAAAACCTT+AGG | - | chr8_4:5124814-5124833 | None:intergenic | 40.0% | |
| ! | ACCGATTGATCTGAAGGTTT+TGG | + | chr8_4:5124902-5124921 | Msa1308770:intron | 40.0% |
| CCCAAAACCTTCAGATCAAT+CGG | - | chr8_4:5124906-5124925 | None:intergenic | 40.0% | |
| ! | CCGATTGATCTGAAGGTTTT+GGG | + | chr8_4:5124903-5124922 | Msa1308770:intron | 40.0% |
| CACTGAAGGGAAAAAGATAG+AGG | + | chr8_4:5125275-5125294 | Msa1308770:intron | 40.0% | |
| ! | TGTATGAGATTAGCCAGCAA+CGG | - | chr8_4:5125483-5125502 | None:intergenic | 40.0% |
| ! | ACAATTGGCTCCAACAACTA+AGG | - | chr8_4:5125750-5125769 | None:intergenic | 40.0% |
| TCAAAGGACCTTACCAAACA+GGG | - | chr8_4:5125831-5125850 | None:intergenic | 40.0% | |
| TTCAAAGGACCTTACCAAAC+AGG | - | chr8_4:5125832-5125851 | None:intergenic | 40.0% | |
| GCATGCTCATACTCATTCAA+AGG | - | chr8_4:5125847-5125866 | None:intergenic | 40.0% | |
| TCAGTCCAACACAATGTTGT+CGG | - | chr8_4:5126029-5126048 | None:intergenic | 40.0% | |
| GCGGTTACTGCAGAAAATTA+TGG | + | chr8_4:5126527-5126546 | Msa1308770:intron | 40.0% | |
| CAGATTCTTCCGCATTACTT+CGG | - | chr8_4:5126557-5126576 | None:intergenic | 40.0% | |
| ! | TCTGAAGTGCCTAAGATTGA+AGG | + | chr8_4:5126688-5126707 | Msa1308770:intron | 40.0% |
| CCCATCAATATATACTTGGC+TGG | + | chr8_4:5127087-5127106 | Msa1308770:intron | 40.0% | |
| AGCAGTAATTCAGCCTCATA+GGG | - | chr8_4:5127127-5127146 | None:intergenic | 40.0% | |
| TAGCAGTAATTCAGCCTCAT+AGG | - | chr8_4:5127128-5127147 | None:intergenic | 40.0% | |
| AAGTGCGATAAGTAGTGCAT+TGG | - | chr8_4:5127266-5127285 | None:intergenic | 40.0% | |
| TCCTTCACAGGAACTTTGAA+AGG | + | chr8_4:5127298-5127317 | Msa1308770:intron | 40.0% | |
| ! | CCTTCACAGGAACTTTGAAA+GGG | + | chr8_4:5127299-5127318 | Msa1308770:intron | 40.0% |
| ! | TGAACAAATACATGGTGCCA+TGG | + | chr8_4:5127766-5127785 | Msa1308770:intron | 40.0% |
| !! | TGGCTTTGGTAGGGTTATTA+TGG | - | chr8_4:5127973-5127992 | None:intergenic | 40.0% |
| AGTTCATTTCCAAGAGGCTT+GGG | - | chr8_4:5128410-5128429 | None:intergenic | 40.0% | |
| TCAAGGAGTTCATTTCCAAG+AGG | - | chr8_4:5128416-5128435 | None:intergenic | 40.0% | |
| AGTTCCCATATCTCAAGTCA+AGG | + | chr8_4:5128536-5128555 | Msa1308770:three_prime_UTR | 40.0% | |
| ! | TGCTCCTTGACTTGAGATAT+GGG | - | chr8_4:5128543-5128562 | None:intergenic | 40.0% |
| TGCTAGCATAGGCAATTGTG+AGG | + | chr8_4:5121452-5121471 | Msa1308770:intron | 45.0% | |
| AAGCCAACTCCTTCACACTA+AGG | - | chr8_4:5121787-5121806 | None:intergenic | 45.0% | |
| GACCCCACACTATGTTGATA+TGG | - | chr8_4:5122444-5122463 | None:intergenic | 45.0% | |
| GGCTCCGTTTAAGAGTTTCA+AGG | + | chr8_4:5122532-5122551 | Msa1308770:intron | 45.0% | |
| TTTGTGAGTCTAGAAGGGGA+GGG | - | chr8_4:5122719-5122738 | None:intergenic | 45.0% | |
| GCTCTGTTTGTGAGTCTAGA+AGG | - | chr8_4:5122725-5122744 | None:intergenic | 45.0% | |
| GTTAGAAAGGCCAAGTGTGT+TGG | + | chr8_4:5122804-5122823 | Msa1308770:intron | 45.0% | |
| AGCAAGAAAAGAAGGCCACA+TGG | - | chr8_4:5123006-5123025 | None:intergenic | 45.0% | |
| !! | GGGTGTTATTCTAACAGTCC+AGG | - | chr8_4:5123171-5123190 | None:intergenic | 45.0% |
| ! | TTTTGGATCCAGTGATGAGC+TGG | + | chr8_4:5123285-5123304 | Msa1308770:intron | 45.0% |
| TTTGGATCCAGTGATGAGCT+GGG | + | chr8_4:5123286-5123305 | Msa1308770:intron | 45.0% | |
| AATAAACCCCAGCTCATCAC+TGG | - | chr8_4:5123296-5123315 | None:intergenic | 45.0% | |
| CCGTACATCAATCAGCAAAC+AGG | + | chr8_4:5123380-5123399 | Msa1308770:CDS | 45.0% | |
| AGATGGTCATGGGATACTGA+AGG | - | chr8_4:5123592-5123611 | None:intergenic | 45.0% | |
| !!! | GCATACTTTTGAGACACAGC+AGG | + | chr8_4:5123617-5123636 | Msa1308770:CDS | 45.0% |
| GCTGTGACTTTATGACTGCT+TGG | + | chr8_4:5123656-5123675 | Msa1308770:CDS | 45.0% | |
| TTTCCTGCTAACTGTAGGGA+TGG | - | chr8_4:5123835-5123854 | None:intergenic | 45.0% | |
| TCTGCTAGGGAGGTTAACTA+CGG | - | chr8_4:5123912-5123931 | None:intergenic | 45.0% | |
| ! | TCATAGGTTTTCTGCTAGGG+AGG | - | chr8_4:5123922-5123941 | None:intergenic | 45.0% |
| ATTGAGGTACGGAAAGAGCT+AGG | - | chr8_4:5124145-5124164 | None:intergenic | 45.0% | |
| CACCCAAAAGTGAACAAGCT+TGG | + | chr8_4:5124634-5124653 | Msa1308770:CDS | 45.0% | |
| GTGAACAAGCTTGGAGTCAT+AGG | + | chr8_4:5124643-5124662 | Msa1308770:CDS | 45.0% | |
| ! | TTGTGATGGGAAGCCATAAG+GGG | - | chr8_4:5124687-5124706 | None:intergenic | 45.0% |
| GCTTGTGGAAAAAATAGCCG+AGG | + | chr8_4:5125035-5125054 | Msa1308770:CDS | 45.0% | |
| ! | TGGTTTTCTTACCCAAGCGA+AGG | + | chr8_4:5125124-5125143 | Msa1308770:intron | 45.0% |
| !! | CCAAAAATGGGCTACTGATG+AGG | - | chr8_4:5125781-5125800 | None:intergenic | 45.0% |
| ! | CCTCATCAGTAGCCCATTTT+TGG | + | chr8_4:5125778-5125797 | Msa1308770:intron | 45.0% |
| ATATTCCCCTGTTCCCTGTT+TGG | + | chr8_4:5125815-5125834 | Msa1308770:intron | 45.0% | |
| ACCTTACCAAACAGGGAACA+GGG | - | chr8_4:5125824-5125843 | None:intergenic | 45.0% | |
| AAAAAATAGTTCAGCCCCCG+TGG | + | chr8_4:5125950-5125969 | Msa1308770:intron | 45.0% | |
| TATGCCCGACAACATTGTGT+TGG | + | chr8_4:5126021-5126040 | Msa1308770:intron | 45.0% | |
| CAGTCCAACACAATGTTGTC+GGG | - | chr8_4:5126028-5126047 | None:intergenic | 45.0% | |
| AACATTGTGTTGGACTGACC+TGG | + | chr8_4:5126031-5126050 | Msa1308770:intron | 45.0% | |
| ACATTGTGTTGGACTGACCT+GGG | + | chr8_4:5126032-5126051 | Msa1308770:intron | 45.0% | |
| CGAAAGTTACTGGTCAGGTA+CGG | - | chr8_4:5126063-5126082 | None:intergenic | 45.0% | |
| CGTACCTGACCAGTAACTTT+CGG | + | chr8_4:5126061-5126080 | Msa1308770:intron | 45.0% | |
| TTTGGCTGACCGAAAGTTAC+TGG | - | chr8_4:5126073-5126092 | None:intergenic | 45.0% | |
| TAGCGTCCATCATATTGCAG+CGG | + | chr8_4:5126508-5126527 | Msa1308770:intron | 45.0% | |
| CAGTAACCGCTGCAATATGA+TGG | - | chr8_4:5126517-5126536 | None:intergenic | 45.0% | |
| TATGGAGGACCGAAGTAATG+CGG | + | chr8_4:5126545-5126564 | Msa1308770:CDS | 45.0% | |
| GCGGAAGAATCTGCATCTTA+TGG | + | chr8_4:5126564-5126583 | Msa1308770:CDS | 45.0% | |
| !! | GTGCTGAATTTTCTAGCAGG+AGG | - | chr8_4:5126801-5126820 | None:intergenic | 45.0% |
| TGAGGCTGAATTACTGCTAG+TGG | + | chr8_4:5127129-5127148 | Msa1308770:intron | 45.0% | |
| CTTGATCGTTGGAGTATGTG+TGG | + | chr8_4:5127208-5127227 | Msa1308770:intron | 45.0% | |
| ATCGTTGGAGTATGTGTGGA+AGG | + | chr8_4:5127212-5127231 | Msa1308770:intron | 45.0% | |
| TGGAGTATGTGTGGAAGGTT+TGG | + | chr8_4:5127217-5127236 | Msa1308770:intron | 45.0% | |
| GTATCACACGTTTCCTTCAC+AGG | + | chr8_4:5127286-5127305 | Msa1308770:intron | 45.0% | |
| CCCTTTCAAAGTTCCTGTGA+AGG | - | chr8_4:5127302-5127321 | None:intergenic | 45.0% | |
| TTTGTCAGGACGAACTCGAT+TGG | + | chr8_4:5127398-5127417 | Msa1308770:intron | 45.0% | |
| TAAGTCTTACATGGATCGGC+TGG | + | chr8_4:5127523-5127542 | Msa1308770:intron | 45.0% | |
| !! | ACAAATACATGGTGCCATGG+TGG | + | chr8_4:5127769-5127788 | Msa1308770:intron | 45.0% |
| !! | TCTGCAAAAAGCATCCACCA+TGG | - | chr8_4:5127786-5127805 | None:intergenic | 45.0% |
| CACACGGTTTCTGCCTAATT+AGG | + | chr8_4:5127869-5127888 | Msa1308770:intron | 45.0% | |
| AAACGCACAAACAACAGCGT+AGG | + | chr8_4:5127928-5127947 | Msa1308770:intron | 45.0% | |
| GCTAGCATGTTCCATGACTT+TGG | + | chr8_4:5128173-5128192 | Msa1308770:CDS | 45.0% | |
| ATCGTCATCAGCAAAAGTCG+AGG | - | chr8_4:5128234-5128253 | None:intergenic | 45.0% | |
| ! | CAGAATATGTGGCTTGTGCT+TGG | - | chr8_4:5128268-5128287 | None:intergenic | 45.0% |
| GAGTTCATTTCCAAGAGGCT+TGG | - | chr8_4:5128411-5128430 | None:intergenic | 45.0% | |
| AGGGCATGACTTATCCAGTA+AGG | - | chr8_4:5128465-5128484 | None:intergenic | 45.0% | |
| ! | CTGCTCCTTGACTTGAGATA+TGG | - | chr8_4:5128544-5128563 | None:intergenic | 45.0% |
| CATATCTCAAGTCAAGGAGC+AGG | + | chr8_4:5128542-5128561 | Msa1308770:three_prime_UTR | 45.0% | |
| AAGTCAAGGAGCAGGAGTTT+CGG | + | chr8_4:5128550-5128569 | Msa1308770:three_prime_UTR | 45.0% | |
| GTGTTGCCCAAAAACTTGCA+AGG | - | chr8_4:5128656-5128675 | None:intergenic | 45.0% | |
| !! | AAATTTCTTAATAAAAAATT+GGG | - | chr8_4:5122374-5122393 | None:intergenic | 5.0% |
| !! | TGAATAAATATAAAATTTAT+AGG | - | chr8_4:5124503-5124522 | None:intergenic | 5.0% |
| !!! | TTAATATTTTTAATACAAAA+TGG | - | chr8_4:5125234-5125253 | None:intergenic | 5.0% |
| !!! | TTTATTTGTAAAATTATTTT+GGG | - | chr8_4:5128678-5128697 | None:intergenic | 5.0% |
| TTTGAGCTTCCGGGTCAACT+CGG | + | chr8_4:5121304-5121323 | Msa1308770:intron | 50.0% | |
| ! | TCATCAAGACCGAGTTGACC+CGG | - | chr8_4:5121316-5121335 | None:intergenic | 50.0% |
| CTTCACACTAAGGCCCTGTT+TGG | - | chr8_4:5121777-5121796 | None:intergenic | 50.0% | |
| CAAACAGGGCCTTAGTGTGA+AGG | + | chr8_4:5121775-5121794 | Msa1308770:intron | 50.0% | |
| TTCAAGGGGGAGAGAATGAG+AGG | + | chr8_4:5122548-5122567 | Msa1308770:intron | 50.0% | |
| TCAAGGGGGAGAGAATGAGA+GGG | + | chr8_4:5122549-5122568 | Msa1308770:intron | 50.0% | |
| GGAGAGAATGAGAGGGCTTT+GGG | + | chr8_4:5122556-5122575 | Msa1308770:intron | 50.0% | |
| TTGTGAGTCTAGAAGGGGAG+GGG | - | chr8_4:5122718-5122737 | None:intergenic | 50.0% | |
| GTTTGTGAGTCTAGAAGGGG+AGG | - | chr8_4:5122720-5122739 | None:intergenic | 50.0% | |
| TTGGATCCAGTGATGAGCTG+GGG | + | chr8_4:5123287-5123306 | Msa1308770:intron | 50.0% | |
| TGGTCATGGGATACTGAAGG+AGG | - | chr8_4:5123589-5123608 | None:intergenic | 50.0% | |
| CTAGGGAGGTTAACTACGGA+AGG | - | chr8_4:5123908-5123927 | None:intergenic | 50.0% | |
| GGGGAAAGAATCTGAGCTTG+TGG | + | chr8_4:5125020-5125039 | Msa1308770:CDS | 50.0% | |
| CCTTACCAAACAGGGAACAG+GGG | - | chr8_4:5125823-5125842 | None:intergenic | 50.0% | |
| GACCTTACCAAACAGGGAAC+AGG | - | chr8_4:5125825-5125844 | None:intergenic | 50.0% | |
| GTGAAAGGGGAAGTGGAATG+TGG | - | chr8_4:5125919-5125938 | None:intergenic | 50.0% | |
| CTGACCGAAAGTTACTGGTC+AGG | - | chr8_4:5126068-5126087 | None:intergenic | 50.0% | |
| GCCAAAATCGAGCTAAGCTG+AGG | + | chr8_4:5126087-5126106 | Msa1308770:intron | 50.0% | |
| ! | GCCTCAGCTTAGCTCGATTT+TGG | - | chr8_4:5126091-5126110 | None:intergenic | 50.0% |
| ! | AAAGCGTTATGTCGGGAGAG+AGG | + | chr8_4:5127435-5127454 | Msa1308770:CDS | 50.0% |
| AGCTTCCTCCTTGGAATGGT+CGG | - | chr8_4:5128156-5128175 | None:intergenic | 50.0% | |
| ! | TGCTAGCTTCCTCCTTGGAA+TGG | - | chr8_4:5128160-5128179 | None:intergenic | 50.0% |
| ! | GAACATGCTAGCTTCCTCCT+TGG | - | chr8_4:5128165-5128184 | None:intergenic | 50.0% |
| !! | GCAGAAAGGTGCCAAAGTCA+TGG | - | chr8_4:5128187-5128206 | None:intergenic | 50.0% |
| CAGCAAAAGTCGAGGTGTGA+AGG | - | chr8_4:5128226-5128245 | None:intergenic | 50.0% | |
| GGGCCTTAGTGTGAAGGAGT+TGG | + | chr8_4:5121781-5121800 | Msa1308770:intron | 55.0% | |
| TACGGGTCTCTTGCATCAGC+TGG | + | chr8_4:5122277-5122296 | Msa1308770:CDS | 55.0% | |
| GGGAGAGAATGAGAGGGCTT+TGG | + | chr8_4:5122555-5122574 | Msa1308770:intron | 55.0% | |
| !! | GAGAATGAGAGGGCTTTGGG+AGG | + | chr8_4:5122559-5122578 | Msa1308770:intron | 55.0% |
| !! | AATGAGAGGGCTTTGGGAGG+AGG | + | chr8_4:5122562-5122581 | Msa1308770:intron | 55.0% |
| !! | ATGAGAGGGCTTTGGGAGGA+GGG | + | chr8_4:5122563-5122582 | Msa1308770:intron | 55.0% |
| GGTCCATCCCTACAGTTAGC+AGG | + | chr8_4:5123829-5123848 | Msa1308770:intron | 55.0% | |
| GTGCTTGGAATCACCGTTGC+TGG | + | chr8_4:5125467-5125486 | Msa1308770:CDS | 55.0% | |
| CCCCTGTTCCCTGTTTGGTA+AGG | + | chr8_4:5125820-5125839 | Msa1308770:intron | 55.0% | |
| ATGCAGTGCAGCCCAACTTC+TGG | - | chr8_4:5126325-5126344 | None:intergenic | 55.0% | |
| CGTTATGTCGGGAGAGAGGT+AGG | + | chr8_4:5127439-5127458 | Msa1308770:intron | 55.0% | |
| TATGTCGGGAGAGAGGTAGG+TGG | + | chr8_4:5127442-5127461 | Msa1308770:intron | 55.0% | |
| ! | GTCGCTTTCTTTCCACGTGC+TGG | + | chr8_4:5128096-5128115 | Msa1308770:CDS | 55.0% |
| ! | TGACGGATCCGACCATTCCA+AGG | + | chr8_4:5128145-5128164 | Msa1308770:CDS | 55.0% |
| GGGTCTCTTGCATCAGCTGG+AGG | + | chr8_4:5122280-5122299 | Msa1308770:CDS | 60.0% | |
| ! | CTTTGGGAGGAGGGAAGGAG+AGG | + | chr8_4:5122572-5122591 | Msa1308770:intron | 60.0% |
| CGGATCCGACCATTCCAAGG+AGG | + | chr8_4:5128148-5128167 | Msa1308770:CDS | 60.0% | |
| CAGCAAGTGCCCAAGCCTCT+TGG | + | chr8_4:5128398-5128417 | Msa1308770:intron | 60.0% | |
| !! | GAGGGCTTTGGGAGGAGGGA+AGG | + | chr8_4:5122567-5122586 | Msa1308770:intron | 65.0% |
| GGTCAGGTACGGAAGAGCCC+AGG | - | chr8_4:5126052-5126071 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 5120940 | 5128915 | 5120940 | ID=Msa1308770;Name=Msa1308770 |
| chr8_4 | mRNA | 5120940 | 5128915 | 5120940 | ID=Msa1308770-mRNA-1;Parent=Msa1308770;Name=Msa1308770-mRNA-1;_AED=0.21;_eAED=0.21;_QI=135|1|1|1|0.9|0.81|11|395|438 |
| chr8_4 | exon | 5120940 | 5121038 | 5120940 | ID=Msa1308770-mRNA-1:exon:1572;Parent=Msa1308770-mRNA-1 |
| chr8_4 | exon | 5122209 | 5122327 | 5122209 | ID=Msa1308770-mRNA-1:exon:1573;Parent=Msa1308770-mRNA-1 |
| chr8_4 | exon | 5123297 | 5123686 | 5123297 | ID=Msa1308770-mRNA-1:exon:1574;Parent=Msa1308770-mRNA-1 |
| chr8_4 | exon | 5124554 | 5124664 | 5124554 | ID=Msa1308770-mRNA-1:exon:1575;Parent=Msa1308770-mRNA-1 |
| chr8_4 | exon | 5124966 | 5125056 | 5124966 | ID=Msa1308770-mRNA-1:exon:1576;Parent=Msa1308770-mRNA-1 |
| chr8_4 | exon | 5125448 | 5125516 | 5125448 | ID=Msa1308770-mRNA-1:exon:1577;Parent=Msa1308770-mRNA-1 |
| chr8_4 | exon | 5126300 | 5126377 | 5126300 | ID=Msa1308770-mRNA-1:exon:1578;Parent=Msa1308770-mRNA-1 |
| chr8_4 | exon | 5126528 | 5126617 | 5126528 | ID=Msa1308770-mRNA-1:exon:1579;Parent=Msa1308770-mRNA-1 |
| chr8_4 | exon | 5127406 | 5127456 | 5127406 | ID=Msa1308770-mRNA-1:exon:1580;Parent=Msa1308770-mRNA-1 |
| chr8_4 | exon | 5128080 | 5128313 | 5128080 | ID=Msa1308770-mRNA-1:exon:1581;Parent=Msa1308770-mRNA-1 |
| chr8_4 | exon | 5128401 | 5128915 | 5128401 | ID=Msa1308770-mRNA-1:exon:1582;Parent=Msa1308770-mRNA-1 |
| chr8_4 | five_prime_UTR | 5120940 | 5121038 | 5120940 | ID=Msa1308770-mRNA-1:five_prime_utr;Parent=Msa1308770-mRNA-1 |
| chr8_4 | five_prime_UTR | 5122209 | 5122244 | 5122209 | ID=Msa1308770-mRNA-1:five_prime_utr;Parent=Msa1308770-mRNA-1 |
| chr8_4 | CDS | 5122245 | 5122327 | 5122245 | ID=Msa1308770-mRNA-1:cds;Parent=Msa1308770-mRNA-1 |
| chr8_4 | CDS | 5123297 | 5123686 | 5123297 | ID=Msa1308770-mRNA-1:cds;Parent=Msa1308770-mRNA-1 |
| chr8_4 | CDS | 5124554 | 5124664 | 5124554 | ID=Msa1308770-mRNA-1:cds;Parent=Msa1308770-mRNA-1 |
| chr8_4 | CDS | 5124966 | 5125056 | 5124966 | ID=Msa1308770-mRNA-1:cds;Parent=Msa1308770-mRNA-1 |
| chr8_4 | CDS | 5125448 | 5125516 | 5125448 | ID=Msa1308770-mRNA-1:cds;Parent=Msa1308770-mRNA-1 |
| chr8_4 | CDS | 5126300 | 5126377 | 5126300 | ID=Msa1308770-mRNA-1:cds;Parent=Msa1308770-mRNA-1 |
| chr8_4 | CDS | 5126528 | 5126617 | 5126528 | ID=Msa1308770-mRNA-1:cds;Parent=Msa1308770-mRNA-1 |
| chr8_4 | CDS | 5127406 | 5127456 | 5127406 | ID=Msa1308770-mRNA-1:cds;Parent=Msa1308770-mRNA-1 |
| chr8_4 | CDS | 5128080 | 5128313 | 5128080 | ID=Msa1308770-mRNA-1:cds;Parent=Msa1308770-mRNA-1 |
| chr8_4 | CDS | 5128401 | 5128520 | 5128401 | ID=Msa1308770-mRNA-1:cds;Parent=Msa1308770-mRNA-1 |
| chr8_4 | three_prime_UTR | 5128521 | 5128915 | 5128521 | ID=Msa1308770-mRNA-1:three_prime_utr;Parent=Msa1308770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
