AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0616580

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0616580 MtrunA17_Chr8g0376181 94.156 616 7 1 1 616 35 621 0.0 1179
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0616580 AT1G23170.2 57.093 578 201 8 17 578 15 561 0.0 613
Msa0616580 AT1G70770.2 57.793 571 198 7 19 578 14 552 0.0 595
Msa0616580 AT1G70770.1 57.793 571 198 7 19 578 14 552 0.0 595
Msa0616580 AT1G23170.1 52.422 578 182 9 17 578 15 515 0.0 527
Msa0616580 AT3G11880.2 45.661 484 198 14 111 578 3 437 4.47e-119 362
Msa0616580 AT3G11880.1 46.855 461 187 13 134 578 3 421 4.11e-118 358
Msa0616580 AT3G11880.3 46.774 372 141 10 111 471 3 328 2.48e-93 291
Msa0616580 AT3G11880.4 43.769 329 128 10 111 428 3 285 8.48e-69 226

Find 201 sgRNAs with CRISPR-Local

Find 395 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAAGTGTTGTTCCATTAAA+AGG 0.106037 4_2:+66482963 None:intergenic
TTCCTTTCTGCTTTGGTCTT+TGG 0.139887 4_2:-66486269 Msa0616580:CDS
TCTCAGTTGGTTTGTATTCT+TGG 0.158367 4_2:-66484819 Msa0616580:CDS
ATGCGGTTTGCGGATTATTT+TGG 0.187926 4_2:-66487390 Msa0616580:CDS
CTTACGAAGAGTTGACTTAT+AGG 0.199809 4_2:+66488145 None:intergenic
CTACCCCAACATGGAATCTT+TGG 0.234838 4_2:-66483504 Msa0616580:CDS
CCCTAAAGCACGGGCTGTTT+TGG 0.242352 4_2:-66484615 Msa0616580:CDS
AGTGAGAGAGATATGAAAAT+TGG 0.252190 4_2:+66488087 None:intergenic
CTCTCTCAGAATGGGATATA+TGG 0.269677 4_2:+66484383 None:intergenic
CCAAAACAGCCCGTGCTTTA+GGG 0.272787 4_2:+66484615 None:intergenic
TTCCTTGGGTGAAATTGTTC+AGG 0.284035 4_2:-66487335 Msa0616580:CDS
CACTTAGTTCCTTTCTGCTT+TGG 0.285709 4_2:-66486276 Msa0616580:CDS
ACCAAAACAGCCCGTGCTTT+AGG 0.295717 4_2:+66484614 None:intergenic
TGTTTCATTGCTTTACTTCC+AGG 0.297609 4_2:+66484342 None:intergenic
AACCCTTGGTCACAGTTTGC+TGG 0.323214 4_2:+66486221 None:intergenic
CTAGTTCTTTCAACTTTAAG+AGG 0.329557 4_2:+66485425 None:intergenic
CAACCCGCAATCCAGGGATT+TGG 0.335667 4_2:-66484758 Msa0616580:CDS
TCAGCGCTGCTCAGTTTCCT+TGG 0.337666 4_2:-66487350 Msa0616580:CDS
ACCTTAGGTTTCTTCACCTT+TGG 0.337808 4_2:+66487638 None:intergenic
GTGGCTCTTGGCGGTTCTCC+TGG 0.348034 4_2:-66484360 Msa0616580:CDS
AAATCCAAAGATTCCATGTT+GGG 0.364480 4_2:+66483500 None:intergenic
TCGAGAATATTGTGCATTAC+CGG 0.366695 4_2:-66483436 Msa0616580:three_prime_UTR
TCGATAAAGATCCGGAATTC+AGG 0.372452 4_2:-66482924 Msa0616580:three_prime_UTR
ACATCAAATAAATTATAAAA+TGG 0.373047 4_2:+66483235 None:intergenic
GTTGAAGGTGAGTTTGTTAC+CGG 0.374708 4_2:+66487880 None:intergenic
AAACCAAATCCCTGGATTGC+GGG 0.379701 4_2:+66484755 None:intergenic
ATGAAGAACCGAGAAAAGAT+AGG 0.379893 4_2:+66482992 None:intergenic
TGTGACCAAGGGTTCCAAAA+AGG 0.391826 4_2:-66486212 Msa0616580:CDS
GCTTGTAGCATTCAGTGCTT+TGG 0.393155 4_2:+66484117 None:intergenic
TATTCTCGAATGCTCAGAAC+TGG 0.397435 4_2:+66483450 None:intergenic
AGCAGCGTCGTTTCCGTTGA+AGG 0.401884 4_2:+66487865 None:intergenic
TACAGGTGTAGTTGCCTCAT+TGG 0.408090 4_2:+66483142 None:intergenic
TAATAAGAGCATCAGGCTTT+CGG 0.411863 4_2:+66485078 None:intergenic
GTTGAGGTCAATCTACTTTG+AGG 0.412827 4_2:-66483273 Msa0616580:three_prime_UTR
CACTTGTTGAGCTTGTCATT+TGG 0.414490 4_2:-66482947 Msa0616580:three_prime_UTR
GCTTCCGCCACCGTCACCTT+AGG 0.420485 4_2:+66487623 None:intergenic
GATCGCTGCTTCGATCTAAC+TGG 0.421839 4_2:+66487755 None:intergenic
CAGCGCTGCTCAGTTTCCTT+GGG 0.422296 4_2:-66487349 Msa0616580:CDS
GGGAGATCCTAAAGAACTTT+AGG 0.423156 4_2:-66483804 Msa0616580:CDS
CCTATAGTGGTTAGCAAAAG+TGG 0.424512 4_2:-66484781 Msa0616580:CDS
GTGGGAGATGGATCCGGAGG+GGG 0.426014 4_2:+66488006 None:intergenic
GAAGATTGATGCAGCTGATC+TGG 0.427235 4_2:-66487594 Msa0616580:CDS
AAAGTGGCAACCCGCAATCC+AGG 0.430699 4_2:-66484765 Msa0616580:CDS
CAAGTCGCTTGAGTTGCATT+CGG 0.432376 4_2:-66487840 Msa0616580:CDS
TACTGTATTGCCCAAATTGA+GGG 0.436105 4_2:-66485057 Msa0616580:CDS
GCACTTTATTACGAGGCAAT+TGG 0.442187 4_2:+66483349 None:intergenic
CCTAAAGAACTTTAGGCAAA+AGG 0.442468 4_2:-66483797 Msa0616580:intron
ATCTCCCTGAGTGGCTCATA+AGG 0.444202 4_2:+66483820 None:intergenic
TCACTCAGTATCCTGAATTC+CGG 0.445294 4_2:+66482913 None:intergenic
CTCTTAAAGTTGAAAGAACT+AGG 0.447191 4_2:-66485424 Msa0616580:CDS
CAAGTGTTGTTCCATTAAAA+GGG 0.449078 4_2:+66482964 None:intergenic
GATGATGATGTGGATCGGTC+AGG 0.450841 4_2:-66487701 Msa0616580:CDS
TGAGGCGAGGACTGCGGCGG+AGG 0.454431 4_2:-66487795 Msa0616580:CDS
GGCGGTGTGGGAGATGGATC+CGG 0.460314 4_2:+66488000 None:intergenic
CTAAATTAACTTCATAATAC+AGG 0.461268 4_2:+66483125 None:intergenic
ACAAGTAACTTCAAAATCTC+AGG 0.462196 4_2:-66486182 Msa0616580:intron
CTCACGGCGCCGATCACGGC+TGG 0.463140 4_2:-66487961 Msa0616580:CDS
CAGCTTACATCAACCACAAT+GGG 0.464866 4_2:-66483381 Msa0616580:three_prime_UTR
GACCTTCTGCCAGCCGTGAT+CGG 0.468288 4_2:+66487952 None:intergenic
GGTGAGTTTGTTACCGGTAC+CGG 0.468566 4_2:+66487886 None:intergenic
GCACTGAATGCTACAAGCTA+TGG 0.469110 4_2:-66484112 Msa0616580:CDS
CTGAGAGAGGTGGCTCTTGG+CGG 0.469550 4_2:-66484369 Msa0616580:CDS
ATTGATTCCTCCTCCAGCAT+TGG 0.470236 4_2:-66484564 Msa0616580:CDS
TCAGTAGGAGATCTCTCAGT+TGG 0.471593 4_2:-66484832 Msa0616580:CDS
GGACAGTATTCTTACTGACT+TGG 0.473081 4_2:-66486248 Msa0616580:CDS
TGTGGGAGATGGATCCGGAG+GGG 0.474914 4_2:+66488005 None:intergenic
GTGGATCGGTCAGGGGAGAA+TGG 0.475403 4_2:-66487692 Msa0616580:CDS
ACCTTTACTCTAGCTGAAGA+TGG 0.476260 4_2:+66484515 None:intergenic
AATACAGTAATAAGAGCATC+AGG 0.478128 4_2:+66485071 None:intergenic
CGCTTGCTACAATGTTCTCC+TGG 0.480089 4_2:+66483899 None:intergenic
CGGATCAAAGTTTCCAATGC+TGG 0.481600 4_2:+66484551 None:intergenic
GTTAACGGTGCTGTAAGAAA+AGG 0.482437 4_2:-66484593 Msa0616580:CDS
AGTTAATTTAGTTGAATCAA+AGG 0.483236 4_2:-66483085 Msa0616580:three_prime_UTR
ACCGTGCTTGCTGTGGCTGT+TGG 0.484447 4_2:-66483539 Msa0616580:CDS
TTACTGTATTGCCCAAATTG+AGG 0.486297 4_2:-66485058 Msa0616580:CDS
AAGAGCCACCTCTCTCAGAA+TGG 0.486370 4_2:+66484374 None:intergenic
ATTCTGAGAGAGGTGGCTCT+TGG 0.487210 4_2:-66484372 Msa0616580:CDS
TGAAGAACCGAGAAAAGATA+GGG 0.488422 4_2:+66482993 None:intergenic
GGAAGAGTTTCACGAGGCCA+TGG 0.488867 4_2:-66483584 Msa0616580:CDS
TAGCCAGCAAACTGTGACCA+AGG 0.494511 4_2:-66486224 Msa0616580:CDS
GCGGAATCTCCTACCTATAG+TGG 0.495190 4_2:-66484794 Msa0616580:CDS
AGATTCGGCGGTGTGGGAGA+TGG 0.497613 4_2:+66487994 None:intergenic
TCATTTGGTCGATAAAGATC+CGG 0.497766 4_2:-66482932 Msa0616580:three_prime_UTR
GCTGCTTCTTTCGATACTCC+AGG 0.497984 4_2:+66484164 None:intergenic
TGAGCAGGAGAAAGTTTACC+AGG 0.499942 4_2:-66483917 Msa0616580:intron
GCAACCATCCATACAATCAC+TGG 0.500036 4_2:+66485002 None:intergenic
TCCTTGGGTGAAATTGTTCA+GGG 0.500312 4_2:-66487334 Msa0616580:CDS
AAGCAGCTTCTATTGCACTT+TGG 0.504270 4_2:-66484148 Msa0616580:CDS
GATACAGATGATGCGGTTTG+CGG 0.509299 4_2:-66487400 Msa0616580:CDS
GTCTCAGATATGTGAGAAAG+TGG 0.510412 4_2:+66486346 None:intergenic
AGAGCCACCTCTCTCAGAAT+GGG 0.511188 4_2:+66484375 None:intergenic
CTTCTTATGCTTCTTCGCGT+AGG 0.511297 4_2:+66487928 None:intergenic
AATTTCGCTATCATAGCAGC+AGG 0.515210 4_2:-66484300 Msa0616580:CDS
GGTGTGGGAGATGGATCCGG+AGG 0.515556 4_2:+66488003 None:intergenic
TGTCTCCTTATGAGCCACTC+AGG 0.516916 4_2:-66483825 Msa0616580:CDS
AAATATTGCAAGATAATCTC+AGG 0.519787 4_2:-66483605 Msa0616580:CDS
CCTTTACTCTAGCTGAAGAT+GGG 0.524391 4_2:+66484516 None:intergenic
GCATATCAGATGAGAGAATA+CGG 0.525068 4_2:+66482816 None:intergenic
GATTGTATGGATGGTTGCTC+AGG 0.525541 4_2:-66484997 Msa0616580:intron
GGTGAGAAAGTGATTGAAAG+AGG 0.526675 4_2:+66488057 None:intergenic
TTGCCAGCATGGTGAAGTAA+AGG 0.526820 4_2:+66483169 None:intergenic
GGAGTTAGATTCGGCGGTGT+GGG 0.527264 4_2:+66487988 None:intergenic
CAGAAAGGAACTAAGTGCCT+CGG 0.527844 4_2:+66486282 None:intergenic
TCAAATTTAACCTACTGGAA+TGG 0.528782 4_2:+66485361 None:intergenic
ACCAACAGCCACAGCAAGCA+CGG 0.529034 4_2:+66483538 None:intergenic
CGCGAAGAAGCATAAGAAGA+AGG 0.529676 4_2:-66487924 Msa0616580:CDS
TATACAAGACATCAGTTGAC+TGG 0.531046 4_2:-66486321 Msa0616580:CDS
ATGATGATGTGGATCGGTCA+GGG 0.531980 4_2:-66487700 Msa0616580:CDS
AAAAGCTGAAGAGGTGAAGA+AGG 0.533059 4_2:-66487669 Msa0616580:CDS
AAGCTGCAAAACCAAATCCC+TGG 0.534627 4_2:+66484747 None:intergenic
GTGTGGGAGATGGATCCGGA+GGG 0.536705 4_2:+66488004 None:intergenic
AGAAAGGAACTAAGTGCCTC+GGG 0.536775 4_2:+66486283 None:intergenic
CGCCGATCACGGCTGGCAGA+AGG 0.538888 4_2:-66487954 Msa0616580:CDS
TTAACCTACTGGAATGGAGA+TGG 0.539815 4_2:+66485367 None:intergenic
AAAGATAGGGGAAAGGACAC+AGG 0.540151 4_2:+66483006 None:intergenic
ACGCCTTTACTTCACCATGC+TGG 0.540170 4_2:-66483172 Msa0616580:three_prime_UTR
GTGAGATGAGGAGTTAGATT+CGG 0.541523 4_2:+66487979 None:intergenic
GACAGTATTCTTACTGACTT+GGG 0.542880 4_2:-66486247 Msa0616580:CDS
TCATCTCACGGCGCCGATCA+CGG 0.544498 4_2:-66487965 Msa0616580:CDS
TTCATCCATGATTGAAAAGG+GGG 0.544826 4_2:+66488036 None:intergenic
CCCATCTTCAGCTAGAGTAA+AGG 0.544992 4_2:-66484516 Msa0616580:intron
TGCATTCGGAGGATCGGAGA+AGG 0.547304 4_2:-66487826 Msa0616580:CDS
AATATTTGTTGCTTTAGCGT+TGG 0.547458 4_2:-66485108 Msa0616580:CDS
AGCTATTGTACTATTTACAT+TGG 0.548646 4_2:-66483029 Msa0616580:three_prime_UTR
TTGGTTTGTATTCTTGGTCG+CGG 0.548699 4_2:-66484813 Msa0616580:CDS
GGTAACAAACTCACCTTCAA+CGG 0.548782 4_2:-66487878 Msa0616580:CDS
GCTAACGGAGTCGCCGGTAC+CGG 0.551347 4_2:-66487899 Msa0616580:CDS
AAAGTTTCCAATGCTGGAGG+AGG 0.556105 4_2:+66484557 None:intergenic
TTTGTCCACCCCTAAAGCAC+GGG 0.556433 4_2:-66484624 Msa0616580:CDS
GACCTTTACCGTGCTTGCTG+TGG 0.557982 4_2:-66483546 Msa0616580:CDS
GAAATCCAAAGATTCCATGT+TGG 0.561519 4_2:+66483499 None:intergenic
ACAGGCTACAGAAAGATTTG+AGG 0.563848 4_2:-66484406 Msa0616580:intron
AAGGAAGCTAACGGAGTCGC+CGG 0.565317 4_2:-66487905 Msa0616580:CDS
TATTGTGCATTACCGGCAGT+TGG 0.567491 4_2:-66483429 Msa0616580:three_prime_UTR
TTGAGTTGCATTCGGAGGAT+CGG 0.568593 4_2:-66487832 Msa0616580:CDS
CACTGAATGCTACAAGCTAT+GGG 0.569907 4_2:-66484111 Msa0616580:intron
CAAAACAGCCCGTGCTTTAG+GGG 0.574054 4_2:+66484616 None:intergenic
GGCATCGTTTGAGCAGAATG+AGG 0.575026 4_2:-66487424 Msa0616580:CDS
AAAACCAAATCCCTGGATTG+CGG 0.578328 4_2:+66484754 None:intergenic
AGCCACAGCAAGCACGGTAA+AGG 0.579436 4_2:+66483544 None:intergenic
TATTTGATGCAACCAACTGC+CGG 0.580342 4_2:+66483417 None:intergenic
GCTATCATAGCAGCAGGAGA+AGG 0.581836 4_2:-66484294 Msa0616580:intron
ACTCCCAGTGATTGTATGGA+TGG 0.582697 4_2:-66485006 Msa0616580:CDS
GAAACCTAAGGTGACGGTGG+CGG 0.583163 4_2:-66487627 Msa0616580:CDS
ATCTATGTGCAGGCTTCAGT+AGG 0.583240 4_2:-66484847 Msa0616580:intron
ACCGAGAAAAGATAGGGGAA+AGG 0.583495 4_2:+66482999 None:intergenic
AGGAGTTAGATTCGGCGGTG+TGG 0.588248 4_2:+66487987 None:intergenic
GTCCAAAGACCAAAGCAGAA+AGG 0.592435 4_2:+66486267 None:intergenic
GAAGAGTTTCACGAGGCCAT+GGG 0.594706 4_2:-66483583 Msa0616580:CDS
GGAGAATGGAAAAGCTGAAG+AGG 0.595415 4_2:-66487678 Msa0616580:CDS
AACAGCCCGTGCTTTAGGGG+TGG 0.598573 4_2:+66484619 None:intergenic
GTCGCTTGAGTTGCATTCGG+AGG 0.598827 4_2:-66487837 Msa0616580:CDS
CATATATCCCATTCTGAGAG+AGG 0.602504 4_2:-66484382 Msa0616580:CDS
ACATCAACAATCTTAGCCAC+AGG 0.603144 4_2:+66487306 None:intergenic
CAACCATCCATACAATCACT+GGG 0.608838 4_2:+66485003 None:intergenic
GAAGGAAAATTCTTGAGGCG+AGG 0.609341 4_2:-66487808 Msa0616580:CDS
AAGTGGCAACCCGCAATCCA+GGG 0.609912 4_2:-66484764 Msa0616580:CDS
GTCTCCTTATGAGCCACTCA+GGG 0.610196 4_2:-66483824 Msa0616580:CDS
GTGATCGGCGCCGTGAGATG+AGG 0.611262 4_2:+66487967 None:intergenic
TCAGCTTACATCAACCACAA+TGG 0.615351 4_2:-66483382 Msa0616580:three_prime_UTR
TCCCTGAACAATTTCACCCA+AGG 0.618599 4_2:+66487333 None:intergenic
TTGGTTTGCTGAACCCATTG+TGG 0.624346 4_2:+66483368 None:intergenic
CGATGAAGACGATGATGATG+TGG 0.624368 4_2:-66487711 Msa0616580:CDS
CATAAGAAGAAGGAAGCTAA+CGG 0.627744 4_2:-66487914 Msa0616580:CDS
ATTCTCGAATGCTCAGAACT+GGG 0.627893 4_2:+66483451 None:intergenic
TTTCATCCATGATTGAAAAG+GGG 0.629081 4_2:+66488035 None:intergenic
CAGATGACACAGAATAGTTG+AGG 0.629463 4_2:-66483289 Msa0616580:three_prime_UTR
TCTTGAGGCGAGGACTGCGG+CGG 0.630323 4_2:-66487798 Msa0616580:CDS
CTTTACTCTAGCTGAAGATG+GGG 0.634564 4_2:+66484517 None:intergenic
TGATGATGTGGATCGGTCAG+GGG 0.634863 4_2:-66487699 Msa0616580:CDS
ATGCTGGCAAAATGCCAATG+AGG 0.634948 4_2:-66483156 Msa0616580:three_prime_UTR
TTTACTCTAGCTGAAGATGG+GGG 0.635009 4_2:+66484518 None:intergenic
GTAATTCCGTGTTGATAGTG+AGG 0.635327 4_2:-66488174 Msa0616580:five_prime_UTR
CAGTTGACTGGATCAATCGT+CGG 0.638176 4_2:-66486309 Msa0616580:CDS
TCAGGATACTGAGTGAGCGA+AGG 0.638319 4_2:-66482906 Msa0616580:three_prime_UTR
GAATCTAACTCCTCATCTCA+CGG 0.640221 4_2:-66487977 Msa0616580:CDS
ACCAAAGGTGAAGAAACCTA+AGG 0.640238 4_2:-66487639 Msa0616580:CDS
AATCCAAAGATTCCATGTTG+GGG 0.642323 4_2:+66483501 None:intergenic
ATCAAAGTTTCCAATGCTGG+AGG 0.642389 4_2:+66484554 None:intergenic
GATCAATCGTCGGTCTCCCG+AGG 0.644658 4_2:-66486299 Msa0616580:CDS
TTCTTTAGGATCTCCCTGAG+TGG 0.645060 4_2:+66483811 None:intergenic
AATTCTTGAGGCGAGGACTG+CGG 0.646090 4_2:-66487801 Msa0616580:CDS
AGCCAGCAAACTGTGACCAA+GGG 0.647478 4_2:-66486223 Msa0616580:CDS
TGTATTGCCCAAATTGAGGG+AGG 0.648811 4_2:-66485054 Msa0616580:CDS
GAAGAAGGTTAAGAAACCAA+AGG 0.649224 4_2:-66487654 Msa0616580:CDS
TCGGAGAAGGAAAATTCTTG+AGG 0.649487 4_2:-66487813 Msa0616580:CDS
GAAGAACCGAGAAAAGATAG+GGG 0.649827 4_2:+66482994 None:intergenic
ATGAGGAGATACAGATGATG+CGG 0.649967 4_2:-66487407 Msa0616580:CDS
GCATTATGCACTTTATTACG+AGG 0.653396 4_2:+66483342 None:intergenic
ATATCCCATTCTGAGAGAGG+TGG 0.657382 4_2:-66484379 Msa0616580:CDS
GGTGAAGAAACCTAAGGTGA+CGG 0.658046 4_2:-66487633 Msa0616580:CDS
TTACTCTAGCTGAAGATGGG+GGG 0.666207 4_2:+66484519 None:intergenic
ATTGTTCAGGGAGTCACCTG+TGG 0.666973 4_2:-66487322 Msa0616580:CDS
GAATGAGAAAGCATTGACAA+CGG 0.668814 4_2:-66483669 Msa0616580:CDS
GCGGAGGCTGAATTTGACGA+TGG 0.674233 4_2:-66487779 Msa0616580:CDS
AAGACGATGATGATGTGGAT+CGG 0.676350 4_2:-66487706 Msa0616580:CDS
AGATGAGGAGTTAGATTCGG+CGG 0.685801 4_2:+66487982 None:intergenic
GAAGAAACCTAAGGTGACGG+TGG 0.705385 4_2:-66487630 Msa0616580:CDS
TCGTAATAAAGTGCATAATG+CGG 0.707183 4_2:-66483340 Msa0616580:three_prime_UTR
ATTTGACCTCACTATCAACA+CGG 0.710546 4_2:+66488168 None:intergenic
ATCTCAGGAAGAGTTTCACG+AGG 0.743689 4_2:-66483590 Msa0616580:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACATCAAATAAATTATAAAA+TGG + chr4_2:66487771-66487790 None:intergenic 10.0%
!! TTAATGTTGAGATTTAATTA+CGG - chr4_2:66483473-66483492 Msa0616580:CDS 15.0%
!! ACTGATTATTATTATTTAGT+GGG - chr4_2:66483845-66483864 Msa0616580:CDS 15.0%
!! TATATAAGTTCACATTATAA+CGG + chr4_2:66484288-66484307 None:intergenic 15.0%
!!! GAACTTATATAGTTTTTTTA+AGG - chr4_2:66484297-66484316 Msa0616580:CDS 15.0%
!!! TATATAGTTTTTTTAAGGTT+TGG - chr4_2:66484302-66484321 Msa0616580:CDS 15.0%
!! GTGTTAATTAAACATTATTT+GGG + chr4_2:66485074-66485093 None:intergenic 15.0%
!! TGTGTTAATTAAACATTATT+TGG + chr4_2:66485075-66485094 None:intergenic 15.0%
!!! ATATTATTTTACCAACTATT+CGG + chr4_2:66485518-66485537 None:intergenic 15.0%
!!! TGAATATGAATATGATTTTA+GGG + chr4_2:66485774-66485793 None:intergenic 15.0%
!!! TTGAATATGAATATGATTTT+AGG + chr4_2:66485775-66485794 None:intergenic 15.0%
!!! TTTATTTTGATGACAAATCA+TGG - chr4_2:66483733-66483752 Msa0616580:intron 20.0%
!!! CACTGATTATTATTATTTAG+TGG - chr4_2:66483844-66483863 Msa0616580:CDS 20.0%
!! ATCATACTTATATCTTAACT+AGG - chr4_2:66483990-66484009 Msa0616580:intron 20.0%
!! TCATACTTATATTCTTAACT+AGG - chr4_2:66484033-66484052 Msa0616580:intron 20.0%
!! ATAGAGCTAAATAATATGTT+TGG - chr4_2:66484061-66484080 Msa0616580:intron 20.0%
!!! CTAATGTATTTCTTTTCAAT+GGG - chr4_2:66484249-66484268 Msa0616580:intron 20.0%
!!! TATTTTAACTTGGTAGAAAA+AGG + chr4_2:66484366-66484385 None:intergenic 20.0%
!!! GACACATTAATATTTTAACT+TGG + chr4_2:66484376-66484395 None:intergenic 20.0%
!! CCTGATAAAACATAAATATT+CGG + chr4_2:66484635-66484654 None:intergenic 20.0%
!!! GTTATTATTGGATTTTGTTT+AGG + chr4_2:66484921-66484940 None:intergenic 20.0%
!!! GTTTTTTTGTTCACTATTAA+GGG - chr4_2:66484986-66485005 Msa0616580:intron 20.0%
!! ATCAATATCAAGACAAATAA+AGG - chr4_2:66485243-66485262 Msa0616580:intron 20.0%
!! AAGTAAAATTCACATAAACA+GGG + chr4_2:66485698-66485717 None:intergenic 20.0%
!! TAAGTAAAATTCACATAAAC+AGG + chr4_2:66485699-66485718 None:intergenic 20.0%
!! GACTTGTAAAAAAAACTTAT+TGG - chr4_2:66485724-66485743 Msa0616580:intron 20.0%
!!! AACATATTCTTCATTTTGAA+AGG + chr4_2:66485817-66485836 None:intergenic 20.0%
!!! TTTTTTTTTACCCTTTCAAA+AGG - chr4_2:66486084-66486103 Msa0616580:intron 20.0%
!! AATATTAAAAATCTATGTGC+AGG - chr4_2:66486146-66486165 Msa0616580:intron 20.0%
!! AAGCAAATAACAAAACATAA+TGG + chr4_2:66486352-66486371 None:intergenic 20.0%
!! AGAAATCAAACAATAAAATC+AGG + chr4_2:66486742-66486761 None:intergenic 20.0%
!!! TTTTTGTAATCTTTTTTACG+AGG - chr4_2:66486952-66486971 Msa0616580:intron 20.0%
!! AATAAGTATATAGAGTTTCA+TGG + chr4_2:66487044-66487063 None:intergenic 20.0%
!! TATTTGCTCTTATTCTTTAT+TGG - chr4_2:66487060-66487079 Msa0616580:intron 20.0%
!! CTAAATTAACTTCATAATAC+AGG + chr4_2:66487881-66487900 None:intergenic 20.0%
!! AGTTAATTTAGTTGAATCAA+AGG - chr4_2:66487918-66487937 Msa0616580:CDS 20.0%
!!! CATTTAACTCTAAAAAGTTA+TGG + chr4_2:66488155-66488174 None:intergenic 20.0%
!!! CATAACTTTTTAGAGTTAAA+TGG - chr4_2:66488153-66488172 Msa0616580:five_prime_UTR 20.0%
!! TTTTCATCCATGATTGAAAA+GGG + chr4_2:66482972-66482991 None:intergenic 25.0%
!!! TTTAATTACGGTTTTGTGAT+TGG - chr4_2:66483485-66483504 Msa0616580:CDS 25.0%
!!! TGCATGTTTGTTTTTGAATT+AGG - chr4_2:66483558-66483577 Msa0616580:CDS 25.0%
! TTCAACTGTTATATATGTTC+TGG - chr4_2:66483806-66483825 Msa0616580:CDS 25.0%
!! TATATATGTTCTGGTGTTTT+TGG - chr4_2:66483815-66483834 Msa0616580:CDS 25.0%
! CAAATCTTGTAACAGAAATT+GGG + chr4_2:66483901-66483920 None:intergenic 25.0%
! ACAAATCTTGTAACAGAAAT+TGG + chr4_2:66483902-66483921 None:intergenic 25.0%
!!! TATGTTTGGAGCTTTTAATT+TGG - chr4_2:66484075-66484094 Msa0616580:intron 25.0%
!! GCTAATGTATTTCTTTTCAA+TGG - chr4_2:66484248-66484267 Msa0616580:intron 25.0%
! TATAAAACATTTCAGTACTG+TGG + chr4_2:66484447-66484466 None:intergenic 25.0%
!! GATGTTGTTTATCATAATCT+TGG - chr4_2:66484575-66484594 Msa0616580:CDS 25.0%
!! CCGAATATTTATGTTTTATC+AGG - chr4_2:66484632-66484651 Msa0616580:intron 25.0%
!!! GGTTTTTTTGTTCACTATTA+AGG - chr4_2:66484985-66485004 Msa0616580:intron 25.0%
! AATGAAGATCCAATAGAAAA+GGG + chr4_2:66485189-66485208 None:intergenic 25.0%
! AAATGAAGATCCAATAGAAA+AGG + chr4_2:66485190-66485209 None:intergenic 25.0%
!!! TTGTACTTATCCTTTTGAAA+GGG + chr4_2:66486097-66486116 None:intergenic 25.0%
!! GAAAAGTATGTAAATGTTTC+TGG - chr4_2:66486282-66486301 Msa0616580:CDS 25.0%
!! TCAATATGTTGCTATTATAC+AGG - chr4_2:66486579-66486598 Msa0616580:intron 25.0%
!!! ATGGACTGATTTAACTATTT+TGG - chr4_2:66487306-66487325 Msa0616580:intron 25.0%
! AAATATTGCAAGATAATCTC+AGG - chr4_2:66487398-66487417 Msa0616580:CDS 25.0%
! AGCTATTGTACTATTTACAT+TGG - chr4_2:66487974-66487993 Msa0616580:CDS 25.0%
AATTGGAACAGAAAAAACGA+AGG + chr4_2:66482902-66482921 None:intergenic 30.0%
AGTGAGAGAGATATGAAAAT+TGG + chr4_2:66482919-66482938 None:intergenic 30.0%
TTTCATCCATGATTGAAAAG+GGG + chr4_2:66482971-66482990 None:intergenic 30.0%
! GTTTTCATCCATGATTGAAA+AGG + chr4_2:66482973-66482992 None:intergenic 30.0%
! GACTTTTCTCGTTGATATAT+CGG - chr4_2:66483433-66483452 Msa0616580:three_prime_UTR 30.0%
TATATCTTAACTAGGAACTC+AGG - chr4_2:66483998-66484017 Msa0616580:intron 30.0%
ATATCTTAACTAGGAACTCA+GGG - chr4_2:66483999-66484018 Msa0616580:intron 30.0%
AGAAAGAAACGTGTTAAACT+TGG - chr4_2:66484116-66484135 Msa0616580:CDS 30.0%
GACTTATAAAAACTGCTACA+TGG + chr4_2:66484148-66484167 None:intergenic 30.0%
ACAAGTAACTTCAAAATCTC+AGG - chr4_2:66484821-66484840 Msa0616580:CDS 30.0%
! TAGCTTAGTTTGGTTTATGT+TGG + chr4_2:66484952-66484971 None:intergenic 30.0%
ACATAAACCAAACTAAGCTA+AGG - chr4_2:66484952-66484971 Msa0616580:intron 30.0%
TTGGGACAAGATTATTTACT+AGG + chr4_2:66485056-66485075 None:intergenic 30.0%
ACAAATAAAGGAACTTCTGT+AGG - chr4_2:66485255-66485274 Msa0616580:intron 30.0%
ACGAATATTCTGATATTTCC+AGG + chr4_2:66485321-66485340 None:intergenic 30.0%
!! TTGAAGTATTTTTCCCCTTT+TGG - chr4_2:66485349-66485368 Msa0616580:intron 30.0%
! CTAGTTCTTTCAACTTTAAG+AGG + chr4_2:66485581-66485600 None:intergenic 30.0%
CTCTTAAAGTTGAAAGAACT+AGG - chr4_2:66485579-66485598 Msa0616580:intron 30.0%
TCAAATTTAACCTACTGGAA+TGG + chr4_2:66485645-66485664 None:intergenic 30.0%
CCAAATCAAATTTAACCTAC+TGG + chr4_2:66485650-66485669 None:intergenic 30.0%
CCAGTAGGTTAAATTTGATT+TGG - chr4_2:66485647-66485666 Msa0616580:intron 30.0%
!! ATATGATTTTAGGGACCAAA+AGG + chr4_2:66485765-66485784 None:intergenic 30.0%
CTCAATCTACATCTAAATCA+GGG + chr4_2:66485848-66485867 None:intergenic 30.0%
TCTCAATCTACATCTAAATC+AGG + chr4_2:66485849-66485868 None:intergenic 30.0%
!! AATATTTGTTGCTTTAGCGT+TGG - chr4_2:66485895-66485914 Msa0616580:intron 30.0%
!! AATACAGTAATAAGAGCATC+AGG + chr4_2:66485935-66485954 None:intergenic 30.0%
! TTTTTATCCTCCCTCAATTT+GGG + chr4_2:66485959-66485978 None:intergenic 30.0%
!!! TTTTTTATCCTCCCTCAATT+TGG + chr4_2:66485960-66485979 None:intergenic 30.0%
AGGGAGGATAAAAAATATCA+AGG - chr4_2:66485965-66485984 Msa0616580:intron 30.0%
TAGATGCCATATCAACTAAA+TGG - chr4_2:66486036-66486055 Msa0616580:intron 30.0%
AGATGCCATATCAACTAAAT+GGG - chr4_2:66486037-66486056 Msa0616580:intron 30.0%
! GTTGTACTTATCCTTTTGAA+AGG + chr4_2:66486098-66486117 None:intergenic 30.0%
ACAAAACATAATGGTGAAGA+TGG + chr4_2:66486343-66486362 None:intergenic 30.0%
CAAAATACCTTCTAAACACT+TGG + chr4_2:66486789-66486808 None:intergenic 30.0%
ATTCTTTATTGGATATGAGC+AGG - chr4_2:66487071-66487090 Msa0616580:intron 30.0%
AAATCCAAAGATTCCATGTT+GGG + chr4_2:66487506-66487525 None:intergenic 30.0%
TCGTAATAAAGTGCATAATG+CGG - chr4_2:66487663-66487682 Msa0616580:CDS 30.0%
! CTTCATTTGTTCCCTTTTAA+TGG - chr4_2:66488028-66488047 Msa0616580:exon 30.0%
! CAAGTGTTGTTCCATTAAAA+GGG + chr4_2:66488042-66488061 None:intergenic 30.0%
! ACAAGTGTTGTTCCATTAAA+AGG + chr4_2:66488043-66488062 None:intergenic 30.0%
ATTTGACCTCACTATCAACA+CGG + chr4_2:66482838-66482857 None:intergenic 35.0%
! CTTACGAAGAGTTGACTTAT+AGG + chr4_2:66482861-66482880 None:intergenic 35.0%
CAGAAAAAACGAAGGTGAAA+GGG + chr4_2:66482894-66482913 None:intergenic 35.0%
ACAGAAAAAACGAAGGTGAA+AGG + chr4_2:66482895-66482914 None:intergenic 35.0%
TTCATCCATGATTGAAAAGG+GGG + chr4_2:66482970-66482989 None:intergenic 35.0%
CATAAGAAGAAGGAAGCTAA+CGG - chr4_2:66483089-66483108 Msa0616580:three_prime_UTR 35.0%
GAAGAAGGTTAAGAAACCAA+AGG - chr4_2:66483349-66483368 Msa0616580:three_prime_UTR 35.0%
TTTCTCGTTGATATATCGGT+AGG - chr4_2:66483437-66483456 Msa0616580:three_prime_UTR 35.0%
TTCTCGTTGATATATCGGTA+GGG - chr4_2:66483438-66483457 Msa0616580:three_prime_UTR 35.0%
TATCGGTAGGGTTATTGAAT+TGG - chr4_2:66483450-66483469 Msa0616580:exon 35.0%
TGTTGTTATGTGAATTGTGC+TGG - chr4_2:66483771-66483790 Msa0616580:intron 35.0%
!!! TATGTTCTGGTGTTTTTGGA+TGG - chr4_2:66483819-66483838 Msa0616580:CDS 35.0%
TATCATAAACCCTCATCGTA+TGG + chr4_2:66483966-66483985 None:intergenic 35.0%
TGCTACTCAAATTTGCAGAA+AGG + chr4_2:66484175-66484194 None:intergenic 35.0%
TTGAGTAGCAAAAGTCATTG+AGG - chr4_2:66484185-66484204 Msa0616580:intron 35.0%
TAGCAAAAGTCATTGAGGAA+AGG - chr4_2:66484190-66484209 Msa0616580:intron 35.0%
! CCAACAATTTCATTTGAAGC+TGG + chr4_2:66484224-66484243 None:intergenic 35.0%
CCAGCTTCAAATGAAATTGT+TGG - chr4_2:66484221-66484240 Msa0616580:intron 35.0%
ACATTTCAGTACTGTGGTAT+GGG + chr4_2:66484441-66484460 None:intergenic 35.0%
AACATTTCAGTACTGTGGTA+TGG + chr4_2:66484442-66484461 None:intergenic 35.0%
! CTGAATCTGTTTCGATGTTT+TGG - chr4_2:66484498-66484517 Msa0616580:intron 35.0%
TATACAAGACATCAGTTGAC+TGG - chr4_2:66484682-66484701 Msa0616580:intron 35.0%
!! GACAGTATTCTTACTGACTT+GGG - chr4_2:66484756-66484775 Msa0616580:CDS 35.0%
! CTTAGTTTGGTTTATGTTGG+TGG + chr4_2:66484949-66484968 None:intergenic 35.0%
TGTCTTTGTGATTCAGGATA+TGG + chr4_2:66485031-66485050 None:intergenic 35.0%
ATATCCTGAATCACAAAGAC+AGG - chr4_2:66485030-66485049 Msa0616580:CDS 35.0%
! CCAGAAATTTTACACCATTG+TGG + chr4_2:66485120-66485139 None:intergenic 35.0%
CCACAATGGTGTAAAATTTC+TGG - chr4_2:66485117-66485136 Msa0616580:intron 35.0%
! CAATGGTGTAAAATTTCTGG+AGG - chr4_2:66485120-66485139 Msa0616580:intron 35.0%
! CTTTTCTCACCCTTTTCTAT+TGG - chr4_2:66485177-66485196 Msa0616580:intron 35.0%
! AAGTATTTTTCCCCTTTTGG+AGG - chr4_2:66485352-66485371 Msa0616580:intron 35.0%
! AGTATTTTTCCCCTTTTGGA+GGG - chr4_2:66485353-66485372 Msa0616580:intron 35.0%
AATCAAATGACCCTCCAAAA+GGG + chr4_2:66485366-66485385 None:intergenic 35.0%
ATTTGATTCATGTTGCCAAC+CGG - chr4_2:66485378-66485397 Msa0616580:CDS 35.0%
AAGACTTATCTTACTAGGTC+CGG + chr4_2:66485400-66485419 None:intergenic 35.0%
ACAATGGCAAACAAAGAACA+TGG + chr4_2:66485474-66485493 None:intergenic 35.0%
CTGAATAATGAAAGTCAAGC+AGG + chr4_2:66485543-66485562 None:intergenic 35.0%
!! ATTTGATTTGGAGAGTTGCA+TGG - chr4_2:66485659-66485678 Msa0616580:intron 35.0%
! ATTTTGTGACCTTTGCCTTT+TGG - chr4_2:66485747-66485766 Msa0616580:intron 35.0%
!! ATTGATTTTACATGACCTGC+AGG - chr4_2:66485868-66485887 Msa0616580:intron 35.0%
!! TAATAAGAGCATCAGGCTTT+CGG + chr4_2:66485928-66485947 None:intergenic 35.0%
TTACTGTATTGCCCAAATTG+AGG - chr4_2:66485945-66485964 Msa0616580:intron 35.0%
TACTGTATTGCCCAAATTGA+GGG - chr4_2:66485946-66485965 Msa0616580:intron 35.0%
AAAAACTCCCAGTGATTGTA+TGG - chr4_2:66485993-66486012 Msa0616580:intron 35.0%
! ATGAGCCCATTTAGTTGATA+TGG + chr4_2:66486045-66486064 None:intergenic 35.0%
TTAAGCATTAGCGAGATGAA+GGG + chr4_2:66486128-66486147 None:intergenic 35.0%
ATTAAGCATTAGCGAGATGA+AGG + chr4_2:66486129-66486148 None:intergenic 35.0%
!! TCTCAGTTGGTTTGTATTCT+TGG - chr4_2:66486184-66486203 Msa0616580:CDS 35.0%
! TTTTGCTAACCACTATAGGT+AGG + chr4_2:66486221-66486240 None:intergenic 35.0%
TGTTTCATTGCTTTACTTCC+AGG + chr4_2:66486664-66486683 None:intergenic 35.0%
AGATGAACCAAGTGTTTAGA+AGG - chr4_2:66486779-66486798 Msa0616580:intron 35.0%
TGAAAAAGCTTTCTGATGAC+TGG - chr4_2:66487136-66487155 Msa0616580:intron 35.0%
! CCTTTTGCCTAAAGTTCTTT+AGG + chr4_2:66487209-66487228 None:intergenic 35.0%
CCTAAAGAACTTTAGGCAAA+AGG - chr4_2:66487206-66487225 Msa0616580:intron 35.0%
TTAAATCAGTCCATGTCAAG+GGG + chr4_2:66487300-66487319 None:intergenic 35.0%
GTTAAATCAGTCCATGTCAA+GGG + chr4_2:66487301-66487320 None:intergenic 35.0%
AGTTAAATCAGTCCATGTCA+AGG + chr4_2:66487302-66487321 None:intergenic 35.0%
!! GAATGAGAAAGCATTGACAA+CGG - chr4_2:66487334-66487353 Msa0616580:CDS 35.0%
AATCCAAAGATTCCATGTTG+GGG + chr4_2:66487505-66487524 None:intergenic 35.0%
GAAATCCAAAGATTCCATGT+TGG + chr4_2:66487507-66487526 None:intergenic 35.0%
TCGAGAATATTGTGCATTAC+CGG - chr4_2:66487567-66487586 Msa0616580:intron 35.0%
GCATTATGCACTTTATTACG+AGG + chr4_2:66487664-66487683 None:intergenic 35.0%
TGAAGAACCGAGAAAAGATA+GGG + chr4_2:66488013-66488032 None:intergenic 35.0%
ATGAAGAACCGAGAAAAGAT+AGG + chr4_2:66488014-66488033 None:intergenic 35.0%
TCATTTGGTCGATAAAGATC+CGG - chr4_2:66488071-66488090 Msa0616580:five_prime_UTR 35.0%
! GTTTTCTGTATTACGTTGAC+AGG - chr4_2:66488129-66488148 Msa0616580:five_prime_UTR 35.0%
!! GTAATTCCGTGTTGATAGTG+AGG - chr4_2:66482829-66482848 Msa0616580:three_prime_UTR 40.0%
GGTGAGAAAGTGATTGAAAG+AGG + chr4_2:66482949-66482968 None:intergenic 40.0%
GTGAGATGAGGAGTTAGATT+CGG + chr4_2:66483027-66483046 None:intergenic 40.0%
GAATCTAACTCCTCATCTCA+CGG - chr4_2:66483026-66483045 Msa0616580:three_prime_UTR 40.0%
!! GTTGAAGGTGAGTTTGTTAC+CGG + chr4_2:66483126-66483145 None:intergenic 40.0%
GGTAACAAACTCACCTTCAA+CGG - chr4_2:66483125-66483144 Msa0616580:three_prime_UTR 40.0%
TCGGAGAAGGAAAATTCTTG+AGG - chr4_2:66483190-66483209 Msa0616580:three_prime_UTR 40.0%
! AAGACGATGATGATGTGGAT+CGG - chr4_2:66483297-66483316 Msa0616580:three_prime_UTR 40.0%
AAAAGCTGAAGAGGTGAAGA+AGG - chr4_2:66483334-66483353 Msa0616580:three_prime_UTR 40.0%
ACCAAAGGTGAAGAAACCTA+AGG - chr4_2:66483364-66483383 Msa0616580:three_prime_UTR 40.0%
ACCTTAGGTTTCTTCACCTT+TGG + chr4_2:66483368-66483387 None:intergenic 40.0%
ATGAGGAGATACAGATGATG+CGG - chr4_2:66483596-66483615 Msa0616580:CDS 40.0%
!! ATGCGGTTTGCGGATTATTT+TGG - chr4_2:66483613-66483632 Msa0616580:CDS 40.0%
TTCCTTGGGTGAAATTGTTC+AGG - chr4_2:66483668-66483687 Msa0616580:CDS 40.0%
TCCTTGGGTGAAATTGTTCA+GGG - chr4_2:66483669-66483688 Msa0616580:CDS 40.0%
ACATCAACAATCTTAGCCAC+AGG + chr4_2:66483700-66483719 None:intergenic 40.0%
TGGAGTTTCACAATGCAAAG+AGG + chr4_2:66483946-66483965 None:intergenic 40.0%
TTGTGAAACTCCATACGATG+AGG - chr4_2:66483953-66483972 Msa0616580:intron 40.0%
TGTGAAACTCCATACGATGA+GGG - chr4_2:66483954-66483973 Msa0616580:intron 40.0%
GTCTCAGATATGTGAGAAAG+TGG + chr4_2:66484660-66484679 None:intergenic 40.0%
CACTTAGTTCCTTTCTGCTT+TGG - chr4_2:66484727-66484746 Msa0616580:intron 40.0%
! TTCCTTTCTGCTTTGGTCTT+TGG - chr4_2:66484734-66484753 Msa0616580:intron 40.0%
! GGACAGTATTCTTACTGACT+TGG - chr4_2:66484755-66484774 Msa0616580:CDS 40.0%
!! TACTTGTTGCACAGCCTTTT+TGG + chr4_2:66484808-66484827 None:intergenic 40.0%
TCTTTGTCATGAAACTGCTG+TGG - chr4_2:66484860-66484879 Msa0616580:intron 40.0%
TGTTCTGCCTTAGCTTAGTT+TGG + chr4_2:66484962-66484981 None:intergenic 40.0%
CTAAGCTAAGGCAGAACAAT+AGG - chr4_2:66484964-66484983 Msa0616580:intron 40.0%
ATGGATTCTTCAGATTCCAC+TGG + chr4_2:66485012-66485031 None:intergenic 40.0%
! TGGTGTAAAATTTCTGGAGG+AGG - chr4_2:66485123-66485142 Msa0616580:intron 40.0%
! TCATGAGTGCTTTTATGACC+TGG - chr4_2:66485300-66485319 Msa0616580:intron 40.0%
ATCAAATGACCCTCCAAAAG+GGG + chr4_2:66485365-66485384 None:intergenic 40.0%
GAATCAAATGACCCTCCAAA+AGG + chr4_2:66485367-66485386 None:intergenic 40.0%
GGACCTAGTAAGATAAGTCT+TGG - chr4_2:66485399-66485418 Msa0616580:CDS 40.0%
CCACCAAGACTTATCTTACT+AGG + chr4_2:66485405-66485424 None:intergenic 40.0%
CCTAGTAAGATAAGTCTTGG+TGG - chr4_2:66485402-66485421 Msa0616580:CDS 40.0%
! GTGGTTGTTGTTAGTTGTGA+CGG - chr4_2:66485421-66485440 Msa0616580:CDS 40.0%
! TGACGGCATTTTGTGACTTT+GGG - chr4_2:66485438-66485457 Msa0616580:CDS 40.0%
CAACTATTCGGAACTACCAA+AGG + chr4_2:66485506-66485525 None:intergenic 40.0%
! CTTTGGTAGTTCCGAATAGT+TGG - chr4_2:66485504-66485523 Msa0616580:intron 40.0%
TTAACCTACTGGAATGGAGA+TGG + chr4_2:66485639-66485658 None:intergenic 40.0%
!! TTTTAGGGACCAAAAGGCAA+AGG + chr4_2:66485759-66485778 None:intergenic 40.0%
CAACAAATATTGCAACCTGC+AGG + chr4_2:66485886-66485905 None:intergenic 40.0%
CAACCATCCATACAATCACT+GGG + chr4_2:66486003-66486022 None:intergenic 40.0%
TAAGCATTAGCGAGATGAAG+GGG + chr4_2:66486127-66486146 None:intergenic 40.0%
!! TTGGTTTGTATTCTTGGTCG+CGG - chr4_2:66486190-66486209 Msa0616580:CDS 40.0%
!! CCACTTTTGCTAACCACTAT+AGG + chr4_2:66486225-66486244 None:intergenic 40.0%
CCTATAGTGGTTAGCAAAAG+TGG - chr4_2:66486222-66486241 Msa0616580:CDS 40.0%
AAAACCAAATCCCTGGATTG+CGG + chr4_2:66486252-66486271 None:intergenic 40.0%
AACAGCTATGGTACGAAAAG+GGG + chr4_2:66486319-66486338 None:intergenic 40.0%
CAACAGCTATGGTACGAAAA+GGG + chr4_2:66486320-66486339 None:intergenic 40.0%
!! GTTAACGGTGCTGTAAGAAA+AGG - chr4_2:66486410-66486429 Msa0616580:intron 40.0%
ATCAAAGTTTCCAATGCTGG+AGG + chr4_2:66486452-66486471 None:intergenic 40.0%
TTTACTCTAGCTGAAGATGG+GGG + chr4_2:66486488-66486507 None:intergenic 40.0%
CTTTACTCTAGCTGAAGATG+GGG + chr4_2:66486489-66486508 None:intergenic 40.0%
CCTTTACTCTAGCTGAAGAT+GGG + chr4_2:66486490-66486509 None:intergenic 40.0%
ACCTTTACTCTAGCTGAAGA+TGG + chr4_2:66486491-66486510 None:intergenic 40.0%
TCTTCAGCTAGAGTAAAGGT+AGG - chr4_2:66486491-66486510 Msa0616580:intron 40.0%
ACAGGCTACAGAAAGATTTG+AGG - chr4_2:66486597-66486616 Msa0616580:intron 40.0%
CTCTCTCAGAATGGGATATA+TGG + chr4_2:66486623-66486642 None:intergenic 40.0%
! CATATATCCCATTCTGAGAG+AGG - chr4_2:66486621-66486640 Msa0616580:intron 40.0%
AATTTCGCTATCATAGCAGC+AGG - chr4_2:66486703-66486722 Msa0616580:intron 40.0%
AAGCAGCTTCTATTGCACTT+TGG - chr4_2:66486855-66486874 Msa0616580:intron 40.0%
CACTGAATGCTACAAGCTAT+GGG - chr4_2:66486892-66486911 Msa0616580:intron 40.0%
GGGAGATCCTAAAGAACTTT+AGG - chr4_2:66487199-66487218 Msa0616580:intron 40.0%
TCTATCCGTCTATTGCATCT+AGG - chr4_2:66487261-66487280 Msa0616580:intron 40.0%
GTGATCCTAGATGCAATAGA+CGG + chr4_2:66487269-66487288 None:intergenic 40.0%
ACTTACAAATCCCCTTGACA+TGG - chr4_2:66487287-66487306 Msa0616580:intron 40.0%
! TCAAAAATGACTTGCACCCA+TGG + chr4_2:66487439-66487458 None:intergenic 40.0%
!!! TGTTGTTTTCTACCCCAACA+TGG - chr4_2:66487490-66487509 Msa0616580:intron 40.0%
ATTCTCGAATGCTCAGAACT+GGG + chr4_2:66487555-66487574 None:intergenic 40.0%
TATTCTCGAATGCTCAGAAC+TGG + chr4_2:66487556-66487575 None:intergenic 40.0%
TATTTGATGCAACCAACTGC+CGG + chr4_2:66487589-66487608 None:intergenic 40.0%
TCAGCTTACATCAACCACAA+TGG - chr4_2:66487621-66487640 Msa0616580:CDS 40.0%
CAGCTTACATCAACCACAAT+GGG - chr4_2:66487622-66487641 Msa0616580:CDS 40.0%
GCACTTTATTACGAGGCAAT+TGG + chr4_2:66487657-66487676 None:intergenic 40.0%
CAGATGACACAGAATAGTTG+AGG - chr4_2:66487714-66487733 Msa0616580:CDS 40.0%
GTTGAGGTCAATCTACTTTG+AGG - chr4_2:66487730-66487749 Msa0616580:CDS 40.0%
! TCCTTTCCCCTATCTTTTCT+CGG - chr4_2:66488003-66488022 Msa0616580:CDS 40.0%
GAAGAACCGAGAAAAGATAG+GGG + chr4_2:66488012-66488031 None:intergenic 40.0%
! CACTTGTTGAGCTTGTCATT+TGG - chr4_2:66488056-66488075 Msa0616580:five_prime_UTR 40.0%
TCGATAAAGATCCGGAATTC+AGG - chr4_2:66488079-66488098 Msa0616580:five_prime_UTR 40.0%
TCACTCAGTATCCTGAATTC+CGG + chr4_2:66488093-66488112 None:intergenic 40.0%
! TCTCACCCCCTTTTCAATCA+TGG - chr4_2:66482962-66482981 Msa0616580:three_prime_UTR 45.0%
AGATGAGGAGTTAGATTCGG+CGG + chr4_2:66483024-66483043 None:intergenic 45.0%
CTTCTTATGCTTCTTCGCGT+AGG + chr4_2:66483078-66483097 None:intergenic 45.0%
! CGCGAAGAAGCATAAGAAGA+AGG - chr4_2:66483079-66483098 Msa0616580:three_prime_UTR 45.0%
! CAAGTCGCTTGAGTTGCATT+CGG - chr4_2:66483163-66483182 Msa0616580:three_prime_UTR 45.0%
! TTGAGTTGCATTCGGAGGAT+CGG - chr4_2:66483171-66483190 Msa0616580:three_prime_UTR 45.0%
GAAGGAAAATTCTTGAGGCG+AGG - chr4_2:66483195-66483214 Msa0616580:three_prime_UTR 45.0%
! CGATGAAGACGATGATGATG+TGG - chr4_2:66483292-66483311 Msa0616580:three_prime_UTR 45.0%
! ATGATGATGTGGATCGGTCA+GGG - chr4_2:66483303-66483322 Msa0616580:three_prime_UTR 45.0%
GGAGAATGGAAAAGCTGAAG+AGG - chr4_2:66483325-66483344 Msa0616580:three_prime_UTR 45.0%
GGTGAAGAAACCTAAGGTGA+CGG - chr4_2:66483370-66483389 Msa0616580:three_prime_UTR 45.0%
GAAGATTGATGCAGCTGATC+TGG - chr4_2:66483409-66483428 Msa0616580:three_prime_UTR 45.0%
GATACAGATGATGCGGTTTG+CGG - chr4_2:66483603-66483622 Msa0616580:CDS 45.0%
TCCCTGAACAATTTCACCCA+AGG + chr4_2:66483673-66483692 None:intergenic 45.0%
CAGTTGACTGGATCAATCGT+CGG - chr4_2:66484694-66484713 Msa0616580:intron 45.0%
AGAAAGGAACTAAGTGCCTC+GGG + chr4_2:66484723-66484742 None:intergenic 45.0%
CAGAAAGGAACTAAGTGCCT+CGG + chr4_2:66484724-66484743 None:intergenic 45.0%
GTCCAAAGACCAAAGCAGAA+AGG + chr4_2:66484739-66484758 None:intergenic 45.0%
TGTGACCAAGGGTTCCAAAA+AGG - chr4_2:66484791-66484810 Msa0616580:CDS 45.0%
! TTGGTGGCTGGCGTTATTAT+TGG + chr4_2:66484933-66484952 None:intergenic 45.0%
!! GTTTGGTTTATGTTGGTGGC+TGG + chr4_2:66484945-66484964 None:intergenic 45.0%
TGTTCACTATTAAGGGCCAG+TGG - chr4_2:66484993-66485012 Msa0616580:intron 45.0%
TAGGCCTGTCTTTGTGATTC+AGG + chr4_2:66485037-66485056 None:intergenic 45.0%
! GGAACTTCTGTAGGTGCTAT+CGG - chr4_2:66485264-66485283 Msa0616580:intron 45.0%
! GAACTTCTGTAGGTGCTATC+GGG - chr4_2:66485265-66485284 Msa0616580:intron 45.0%
CTTATCTTACTAGGTCCGGT+TGG + chr4_2:66485396-66485415 None:intergenic 45.0%
! GTGACGGCATTTTGTGACTT+TGG - chr4_2:66485437-66485456 Msa0616580:CDS 45.0%
! GACGGCATTTTGTGACTTTG+GGG - chr4_2:66485439-66485458 Msa0616580:CDS 45.0%
! ACGGCATTTTGTGACTTTGG+GGG - chr4_2:66485440-66485459 Msa0616580:CDS 45.0%
CCAAAGGTGGACAAAGACAA+TGG + chr4_2:66485490-66485509 None:intergenic 45.0%
CCATTGTCTTTGTCCACCTT+TGG - chr4_2:66485487-66485506 Msa0616580:intron 45.0%
CTATTCGGAACTACCAAAGG+TGG + chr4_2:66485503-66485522 None:intergenic 45.0%
GTTTCCATCTCCATTCCAGT+AGG - chr4_2:66485632-66485651 Msa0616580:intron 45.0%
TGTATTGCCCAAATTGAGGG+AGG - chr4_2:66485949-66485968 Msa0616580:intron 45.0%
ACTCCCAGTGATTGTATGGA+TGG - chr4_2:66485997-66486016 Msa0616580:intron 45.0%
GCAACCATCCATACAATCAC+TGG + chr4_2:66486004-66486023 None:intergenic 45.0%
GATTGTATGGATGGTTGCTC+AGG - chr4_2:66486006-66486025 Msa0616580:intron 45.0%
ATCTATGTGCAGGCTTCAGT+AGG - chr4_2:66486156-66486175 Msa0616580:intron 45.0%
TCAGTAGGAGATCTCTCAGT+TGG - chr4_2:66486171-66486190 Msa0616580:intron 45.0%
AAACCAAATCCCTGGATTGC+GGG + chr4_2:66486251-66486270 None:intergenic 45.0%
AAGCTGCAAAACCAAATCCC+TGG + chr4_2:66486259-66486278 None:intergenic 45.0%
!!! GGATTTGGTTTTGCAGCTTG+TGG - chr4_2:66486260-66486279 Msa0616580:CDS 45.0%
GCAACAGCTATGGTACGAAA+AGG + chr4_2:66486321-66486340 None:intergenic 45.0%
! TTTTGTCCACCCCTAAAGCA+CGG - chr4_2:66486378-66486397 Msa0616580:intron 45.0%
! ATTGATTCCTCCTCCAGCAT+TGG - chr4_2:66486439-66486458 Msa0616580:intron 45.0%
AAAGTTTCCAATGCTGGAGG+AGG + chr4_2:66486449-66486468 None:intergenic 45.0%
CGGATCAAAGTTTCCAATGC+TGG + chr4_2:66486455-66486474 None:intergenic 45.0%
AAGATGGGGGGAAAGTAACA+CGG + chr4_2:66486475-66486494 None:intergenic 45.0%
TTACTCTAGCTGAAGATGGG+GGG + chr4_2:66486487-66486506 None:intergenic 45.0%
CCCATCTTCAGCTAGAGTAA+AGG - chr4_2:66486487-66486506 Msa0616580:intron 45.0%
AGTAAAGGTAGGTGTTCAGC+TGG - chr4_2:66486502-66486521 Msa0616580:intron 45.0%
!! GGCTCTGGTGTTTTTGCATT+TGG - chr4_2:66486523-66486542 Msa0616580:intron 45.0%
! ATATCCCATTCTGAGAGAGG+TGG - chr4_2:66486624-66486643 Msa0616580:intron 45.0%
TTCGATACTCCAGGATTGTC+TGG + chr4_2:66486833-66486852 None:intergenic 45.0%
GCTTGTAGCATTCAGTGCTT+TGG + chr4_2:66486889-66486908 None:intergenic 45.0%
GCACTGAATGCTACAAGCTA+TGG - chr4_2:66486891-66486910 Msa0616580:intron 45.0%
TGAGCAGGAGAAAGTTTACC+AGG - chr4_2:66487086-66487105 Msa0616580:intron 45.0%
!! TTCTTTAGGATCTCCCTGAG+TGG + chr4_2:66487195-66487214 None:intergenic 45.0%
GAATATATCGCGCAGACAGA+TGG + chr4_2:66487243-66487262 None:intergenic 45.0%
ATCTCAGGAAGAGTTTCACG+AGG - chr4_2:66487413-66487432 Msa0616580:CDS 45.0%
CTACCCCAACATGGAATCTT+TGG - chr4_2:66487499-66487518 Msa0616580:intron 45.0%
TATTGTGCATTACCGGCAGT+TGG - chr4_2:66487574-66487593 Msa0616580:CDS 45.0%
!! TTGGTTTGCTGAACCCATTG+TGG + chr4_2:66487638-66487657 None:intergenic 45.0%
TTGCCAGCATGGTGAAGTAA+AGG + chr4_2:66487837-66487856 None:intergenic 45.0%
! TCATTGGCATTTTGCCAGCA+TGG + chr4_2:66487848-66487867 None:intergenic 45.0%
ATGCTGGCAAAATGCCAATG+AGG - chr4_2:66487847-66487866 Msa0616580:CDS 45.0%
TACAGGTGTAGTTGCCTCAT+TGG + chr4_2:66487864-66487883 None:intergenic 45.0%
AAAGATAGGGGAAAGGACAC+AGG + chr4_2:66488000-66488019 None:intergenic 45.0%
ACCGAGAAAAGATAGGGGAA+AGG + chr4_2:66488007-66488026 None:intergenic 45.0%
GATGAAAACTACACCCCCTC+CGG - chr4_2:66482984-66483003 Msa0616580:three_prime_UTR 50.0%
!! GGTGAGTTTGTTACCGGTAC+CGG + chr4_2:66483120-66483139 None:intergenic 50.0%
AATTCTTGAGGCGAGGACTG+CGG - chr4_2:66483202-66483221 Msa0616580:three_prime_UTR 50.0%
GATCGCTGCTTCGATCTAAC+TGG + chr4_2:66483251-66483270 None:intergenic 50.0%
! GATGATGATGTGGATCGGTC+AGG - chr4_2:66483302-66483321 Msa0616580:three_prime_UTR 50.0%
! TGATGATGTGGATCGGTCAG+GGG - chr4_2:66483304-66483323 Msa0616580:three_prime_UTR 50.0%
! GAAGAAACCTAAGGTGACGG+TGG - chr4_2:66483373-66483392 Msa0616580:three_prime_UTR 50.0%
GGCATCGTTTGAGCAGAATG+AGG - chr4_2:66483579-66483598 Msa0616580:CDS 50.0%
ATTGTTCAGGGAGTCACCTG+TGG - chr4_2:66483681-66483700 Msa0616580:intron 50.0%
TAGCCAGCAAACTGTGACCA+AGG - chr4_2:66484779-66484798 Msa0616580:CDS 50.0%
AGCCAGCAAACTGTGACCAA+GGG - chr4_2:66484780-66484799 Msa0616580:CDS 50.0%
AACCCTTGGTCACAGTTTGC+TGG + chr4_2:66484785-66484804 None:intergenic 50.0%
!!! CACAGCCTTTTTGGAACCCT+TGG + chr4_2:66484799-66484818 None:intergenic 50.0%
ACCATTGTGGCACGTGTGAA+GGG + chr4_2:66485107-66485126 None:intergenic 50.0%
TATGGATGGTTGCTCAGGTG+AGG - chr4_2:66486011-66486030 Msa0616580:intron 50.0%
GCGGAATCTCCTACCTATAG+TGG - chr4_2:66486209-66486228 Msa0616580:CDS 50.0%
TGGTACGAAAAGGGGTGGAA+AGG + chr4_2:66486311-66486330 None:intergenic 50.0%
AGCTATGGTACGAAAAGGGG+TGG + chr4_2:66486316-66486335 None:intergenic 50.0%
GGTGAAGATGGCAACAGCTA+TGG + chr4_2:66486331-66486350 None:intergenic 50.0%
TTTGTCCACCCCTAAAGCAC+GGG - chr4_2:66486379-66486398 Msa0616580:intron 50.0%
CAAAACAGCCCGTGCTTTAG+GGG + chr4_2:66486390-66486409 None:intergenic 50.0%
CCAAAACAGCCCGTGCTTTA+GGG + chr4_2:66486391-66486410 None:intergenic 50.0%
ACCAAAACAGCCCGTGCTTT+AGG + chr4_2:66486392-66486411 None:intergenic 50.0%
!!! GCACGGGCTGTTTTGGTTAA+CGG - chr4_2:66486395-66486414 Msa0616580:intron 50.0%
AGAGCCACCTCTCTCAGAAT+GGG + chr4_2:66486631-66486650 None:intergenic 50.0%
AAGAGCCACCTCTCTCAGAA+TGG + chr4_2:66486632-66486651 None:intergenic 50.0%
! ATTCTGAGAGAGGTGGCTCT+TGG - chr4_2:66486631-66486650 Msa0616580:intron 50.0%
GCTATCATAGCAGCAGGAGA+AGG - chr4_2:66486709-66486728 Msa0616580:intron 50.0%
TCATAGCAGCAGGAGAAGGT+TGG - chr4_2:66486713-66486732 Msa0616580:intron 50.0%
GCTGCTTCTTTCGATACTCC+AGG + chr4_2:66486842-66486861 None:intergenic 50.0%
! CGCTTGCTACAATGTTCTCC+TGG + chr4_2:66487107-66487126 None:intergenic 50.0%
TGTCTCCTTATGAGCCACTC+AGG - chr4_2:66487178-66487197 Msa0616580:intron 50.0%
GTCTCCTTATGAGCCACTCA+GGG - chr4_2:66487179-66487198 Msa0616580:intron 50.0%
ATCTCCCTGAGTGGCTCATA+AGG + chr4_2:66487186-66487205 None:intergenic 50.0%
GAAGAGTTTCACGAGGCCAT+GGG - chr4_2:66487420-66487439 Msa0616580:CDS 50.0%
ACGCCTTTACTTCACCATGC+TGG - chr4_2:66487831-66487850 Msa0616580:CDS 50.0%
TCAGGATACTGAGTGAGCGA+AGG - chr4_2:66488097-66488116 Msa0616580:five_prime_UTR 50.0%
GGAGTTAGATTCGGCGGTGT+GGG + chr4_2:66483018-66483037 None:intergenic 55.0%
AGGAGTTAGATTCGGCGGTG+TGG + chr4_2:66483019-66483038 None:intergenic 55.0%
AAGGAAGCTAACGGAGTCGC+CGG - chr4_2:66483098-66483117 Msa0616580:three_prime_UTR 55.0%
AGCAGCGTCGTTTCCGTTGA+AGG + chr4_2:66483141-66483160 None:intergenic 55.0%
! GTCGCTTGAGTTGCATTCGG+AGG - chr4_2:66483166-66483185 Msa0616580:three_prime_UTR 55.0%
TGCATTCGGAGGATCGGAGA+AGG - chr4_2:66483177-66483196 Msa0616580:three_prime_UTR 55.0%
GCGGAGGCTGAATTTGACGA+TGG - chr4_2:66483224-66483243 Msa0616580:three_prime_UTR 55.0%
! GAAACCTAAGGTGACGGTGG+CGG - chr4_2:66483376-66483395 Msa0616580:three_prime_UTR 55.0%
TCAGCGCTGCTCAGTTTCCT+TGG - chr4_2:66483653-66483672 Msa0616580:CDS 55.0%
CAGCGCTGCTCAGTTTCCTT+GGG - chr4_2:66483654-66483673 Msa0616580:CDS 55.0%
ACCCTTCACACGTGCCACAA+TGG - chr4_2:66485103-66485122 Msa0616580:CDS 55.0%
CACCATTGTGGCACGTGTGA+AGG + chr4_2:66485108-66485127 None:intergenic 55.0%
AAAGTGGCAACCCGCAATCC+AGG - chr4_2:66486238-66486257 Msa0616580:CDS 55.0%
AAGTGGCAACCCGCAATCCA+GGG - chr4_2:66486239-66486258 Msa0616580:CDS 55.0%
CAACCCGCAATCCAGGGATT+TGG - chr4_2:66486245-66486264 Msa0616580:CDS 55.0%
!! CCCTAAAGCACGGGCTGTTT+TGG - chr4_2:66486388-66486407 Msa0616580:intron 55.0%
GGAAGAGTTTCACGAGGCCA+TGG - chr4_2:66487419-66487438 Msa0616580:CDS 55.0%
! GACCTTTACCGTGCTTGCTG+TGG - chr4_2:66487457-66487476 Msa0616580:intron 55.0%
AGCCACAGCAAGCACGGTAA+AGG + chr4_2:66487462-66487481 None:intergenic 55.0%
ACCAACAGCCACAGCAAGCA+CGG + chr4_2:66487468-66487487 None:intergenic 55.0%
TGTGGGAGATGGATCCGGAG+GGG + chr4_2:66483001-66483020 None:intergenic 60.0%
GTGTGGGAGATGGATCCGGA+GGG + chr4_2:66483002-66483021 None:intergenic 60.0%
AGATTCGGCGGTGTGGGAGA+TGG + chr4_2:66483012-66483031 None:intergenic 60.0%
!! TCATCTCACGGCGCCGATCA+CGG - chr4_2:66483038-66483057 Msa0616580:three_prime_UTR 60.0%
GACCTTCTGCCAGCCGTGAT+CGG + chr4_2:66483054-66483073 None:intergenic 60.0%
GTGGATCGGTCAGGGGAGAA+TGG - chr4_2:66483311-66483330 Msa0616580:three_prime_UTR 60.0%
GATCAATCGTCGGTCTCCCG+AGG - chr4_2:66484704-66484723 Msa0616580:intron 60.0%
!! AACAGCCCGTGCTTTAGGGG+TGG + chr4_2:66486387-66486406 None:intergenic 60.0%
! GGTAGGTGTTCAGCTGGCTC+TGG - chr4_2:66486508-66486527 Msa0616580:intron 60.0%
CTGAGAGAGGTGGCTCTTGG+CGG - chr4_2:66486634-66486653 Msa0616580:intron 60.0%
!! ACCGTGCTTGCTGTGGCTGT+TGG - chr4_2:66487464-66487483 Msa0616580:intron 60.0%
GTGGGAGATGGATCCGGAGG+GGG + chr4_2:66483000-66483019 None:intergenic 65.0%
GGTGTGGGAGATGGATCCGG+AGG + chr4_2:66483003-66483022 None:intergenic 65.0%
GGCGGTGTGGGAGATGGATC+CGG + chr4_2:66483006-66483025 None:intergenic 65.0%
GTGATCGGCGCCGTGAGATG+AGG + chr4_2:66483039-66483058 None:intergenic 65.0%
GCTAACGGAGTCGCCGGTAC+CGG - chr4_2:66483104-66483123 Msa0616580:three_prime_UTR 65.0%
TCTTGAGGCGAGGACTGCGG+CGG - chr4_2:66483205-66483224 Msa0616580:three_prime_UTR 65.0%
GCTTCCGCCACCGTCACCTT+AGG + chr4_2:66483383-66483402 None:intergenic 65.0%
GTGGCTCTTGGCGGTTCTCC+TGG - chr4_2:66486643-66486662 Msa0616580:intron 65.0%
CGCCGATCACGGCTGGCAGA+AGG - chr4_2:66483049-66483068 Msa0616580:three_prime_UTR 70.0%
!! CTCACGGCGCCGATCACGGC+TGG - chr4_2:66483042-66483061 Msa0616580:three_prime_UTR 75.0%
TGAGGCGAGGACTGCGGCGG+AGG - chr4_2:66483208-66483227 Msa0616580:three_prime_UTR 75.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 66482828 66488197 66482828 ID=Msa0616580;Name=Msa0616580
chr4_2 mRNA 66482828 66488197 66482828 ID=Msa0616580-mRNA-1;Parent=Msa0616580;Name=Msa0616580-mRNA-1;_AED=0.02;_eAED=0.02;_QI=153|0.8|0.90|0.90|1|1|11|635|616
chr4_2 exon 66482828 66483690 66482828 ID=Msa0616580-mRNA-1:exon:18900;Parent=Msa0616580-mRNA-1
chr4_2 exon 66483798 66483932 66483798 ID=Msa0616580-mRNA-1:exon:18899;Parent=Msa0616580-mRNA-1
chr4_2 exon 66484112 66484191 66484112 ID=Msa0616580-mRNA-1:exon:18898;Parent=Msa0616580-mRNA-1
chr4_2 exon 66484295 66484424 66484295 ID=Msa0616580-mRNA-1:exon:18897;Parent=Msa0616580-mRNA-1
chr4_2 exon 66484517 66484649 66484517 ID=Msa0616580-mRNA-1:exon:18896;Parent=Msa0616580-mRNA-1
chr4_2 exon 66484739 66484857 66484739 ID=Msa0616580-mRNA-1:exon:18895;Parent=Msa0616580-mRNA-1
chr4_2 exon 66484998 66485135 66484998 ID=Msa0616580-mRNA-1:exon:18894;Parent=Msa0616580-mRNA-1
chr4_2 exon 66485376 66485462 66485376 ID=Msa0616580-mRNA-1:exon:18893;Parent=Msa0616580-mRNA-1
chr4_2 exon 66486183 66486371 66486183 ID=Msa0616580-mRNA-1:exon:18892;Parent=Msa0616580-mRNA-1
chr4_2 exon 66487308 66487445 66487308 ID=Msa0616580-mRNA-1:exon:18891;Parent=Msa0616580-mRNA-1
chr4_2 exon 66487571 66488197 66487571 ID=Msa0616580-mRNA-1:exon:18890;Parent=Msa0616580-mRNA-1
chr4_2 five_prime_UTR 66488045 66488197 66488045 ID=Msa0616580-mRNA-1:five_prime_utr;Parent=Msa0616580-mRNA-1
chr4_2 CDS 66487571 66488044 66487571 ID=Msa0616580-mRNA-1:cds;Parent=Msa0616580-mRNA-1
chr4_2 CDS 66487308 66487445 66487308 ID=Msa0616580-mRNA-1:cds;Parent=Msa0616580-mRNA-1
chr4_2 CDS 66486183 66486371 66486183 ID=Msa0616580-mRNA-1:cds;Parent=Msa0616580-mRNA-1
chr4_2 CDS 66485376 66485462 66485376 ID=Msa0616580-mRNA-1:cds;Parent=Msa0616580-mRNA-1
chr4_2 CDS 66484998 66485135 66484998 ID=Msa0616580-mRNA-1:cds;Parent=Msa0616580-mRNA-1
chr4_2 CDS 66484739 66484857 66484739 ID=Msa0616580-mRNA-1:cds;Parent=Msa0616580-mRNA-1
chr4_2 CDS 66484517 66484649 66484517 ID=Msa0616580-mRNA-1:cds;Parent=Msa0616580-mRNA-1
chr4_2 CDS 66484295 66484424 66484295 ID=Msa0616580-mRNA-1:cds;Parent=Msa0616580-mRNA-1
chr4_2 CDS 66484112 66484191 66484112 ID=Msa0616580-mRNA-1:cds;Parent=Msa0616580-mRNA-1
chr4_2 CDS 66483798 66483932 66483798 ID=Msa0616580-mRNA-1:cds;Parent=Msa0616580-mRNA-1
chr4_2 CDS 66483463 66483690 66483463 ID=Msa0616580-mRNA-1:cds;Parent=Msa0616580-mRNA-1
chr4_2 three_prime_UTR 66482828 66483462 66482828 ID=Msa0616580-mRNA-1:three_prime_utr;Parent=Msa0616580-mRNA-1
Gene Sequence

>Msa0616580

ATGGATGAAAACTACACCCCCTCCGGATCCATCTCCCACACCGCCGAATCTAACTCCTCATCTCACGGCGCCGATCACGGCTGGCAGAAGGTCACCTACGCGAAGAAGCATAAGAAGAAGGAAGCTAACGGAGTCGCCGGTACCGGTAACAAACTCACCTTCAACGGAAACGACGCTGCTTTCAAGTCGCTTGAGTTGCATTCGGAGGATCGGAGAAGGAAAATTCTTGAGGCGAGGACTGCGGCGGAGGCTGAATTTGACGATGGTCCAGTTAGATCGAAGCAGCGATCACGCAATTATGATGATGATGACGATGAAGACGATGATGATGTGGATCGGTCAGGGGAGAATGGAAAAGCTGAAGAGGTGAAGAAGGTTAAGAAACCAAAGGTGAAGAAACCTAAGGTGACGGTGGCGGAAGCTGCTGCGAAGATTGATGCAGCTGATCTGGAGACTTTTCTCGTTGATATATCGGCATCGTTTGAGCAGAATGAGGAGATACAGATGATGCGGTTTGCGGATTATTTTGGACGTGCTTTTTCATCTGTCAGCGCTGCTCAGTTTCCTTGGGTGAAATTGTTCAGGGAGTCACCTGTGGCTAAGATTGTTGATGTGCCACTTTCTCACATATCTGAGACTGTATACAAGACATCAGTTGACTGGATCAATCGTCGGTCTCCCGAGGCACTTAGTTCCTTTCTGCTTTGGTCTTTGGACAGTATTCTTACTGACTTGGGTAGCCAGCAAACTGTGACCAAGGGTTCCAAAAAGGCTGTGCAACAAGTAACTTCAAAATCTCAGTTCACAATGTATTTTCCTCTTAAAGTTGAAAGAACTAGGAAACAAGTAGTCGCTGAAATGAAAACAAATGTTTCCATCTCCATTCCAGTTGCAATATTTGTTGCTTTAGCGTTGGTATTGCGCCGAAAGCCTGATGCTCTTATTACTGTATTGCCCAAATTGAGGGAGGATAAAAAATATCAAGGACAAGAAAAACTCCCAGTGATTGTATGGATGGTTGCTCAGGCTTCAGTAGGAGATCTCTCAGTTGGTTTGTATTCTTGGTCGCGGAATCTCCTACCTATAGTGGTTAGCAAAAGTGGCAACCCGCAATCCAGGGATTTGGTTTTGCAGCTTGTGGAAAAAATTTTGTCCACCCCTAAAGCACGGGCTGTTTTGGTTAACGGTGCTGTAAGAAAAGGAGAACGATTGATTCCTCCTCCAGCATTGGAAACTTTGATCCGTGTTACTTTCCCCCCATCTTCAGCTAGAGTAAAGGCTACAGAAAGATTTGAGGCCATATATCCCATTCTGAGAGAGGTGGCTCTTGGCGGTTCTCCTGGAAGTAAAGCAATGAAACAAGTCTCACAGCAGATATTCAATTTCGCTATCATAGCAGCAGGAGAAGACAATCCTGGAGTATCGAAAGAAGCAGCTTCTATTGCACTTTGGTGTTTTAACCAAAGCACTGAATGCTACAAGCTATGGGAGAAAGTTTACCAGGAGAACATTGTAGCAAGCGTTGCAATTTTGAAAAAGCTTTCTGATGACTGGAAAGAGCAAGCTACAAAATTGTCTCCTTATGAGCCACTCAGGGAGATCCTAAAGAACTTTAGGCAAAAGAATGAGAAAGCATTGACAACGGAGACTGATGCTGCTCGTCAAGCACTCATCAAAGATGCAGATAAATATTGCAAGATAATCTCAGGAAGAGTTTCACGAGGCCATGGGTGCAAGTCATTTTTGACCTTTACCGTGCTTGCTGTGGCTGTTGGTGCTGTTGTTTTCTACCCCAACATGGAATCTTTGGATTTCAAGAAACTCGCTGTAGTTTTCAACTCCCAGTTCTGA
Protein sequence

>Msa0616580

MDENYTPSGSISHTAESNSSSHGADHGWQKVTYAKKHKKKEANGVAGTGNKLTFNGNDAAFKSLELHSEDRRRKILEARTAAEAEFDDGPVRSKQRSRNYDDDDDEDDDDVDRSGENGKAEEVKKVKKPKVKKPKVTVAEAAAKIDAADLETFLVDISASFEQNEEIQMMRFADYFGRAFSSVSAAQFPWVKLFRESPVAKIVDVPLSHISETVYKTSVDWINRRSPEALSSFLLWSLDSILTDLGSQQTVTKGSKKAVQQVTSKSQFTMYFPLKVERTRKQVVAEMKTNVSISIPVAIFVALALVLRRKPDALITVLPKLREDKKYQGQEKLPVIVWMVAQASVGDLSVGLYSWSRNLLPIVVSKSGNPQSRDLVLQLVEKILSTPKARAVLVNGAVRKGERLIPPPALETLIRVTFPPSSARVKATERFEAIYPILREVALGGSPGSKAMKQVSQQIFNFAIIAAGEDNPGVSKEAASIALWCFNQSTECYKLWEKVYQENIVASVAILKKLSDDWKEQATKLSPYEPLREILKNFRQKNEKALTTETDAARQALIKDADKYCKIISGRVSRGHGCKSFLTFTVLAVAVGAVVFYPNMESLDFKKLAVVFNSQF*