AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1335750

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1335750 MtrunA17_Chr1g0153691 84.071 339 8 2 1 293 1 339 0.0 556
Msa1335750 MtrunA17_Chr3g0133751 55.449 312 85 5 17 280 4 309 1.42e-107 315
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1335750 AT4G33380.1 50.893 336 101 7 13 293 2 328 3.47e-103 305
Msa1335750 AT4G33380.2 50.298 336 101 8 13 293 2 326 5.04e-100 296

Find 118 sgRNAs with CRISPR-Local

Find 578 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCAACGTTAAAAGTTATT+TGG 0.086222 tig0000674:-57860 None:intergenic
CCCATCTCATTAATTTAAAA+AGG 0.189536 tig0000674:-65718 None:intergenic
TAGAGGTGGGTTAAGGTTAC+TGG 0.205631 tig0000674:-57788 None:intergenic
AATCAGCTGCACTATCTTTA+TGG 0.210691 tig0000674:-64655 None:intergenic
TTTCATAGATCGATCTATTT+TGG 0.218153 tig0000674:+57834 Msa1335750:five_prime_UTR
ACCAGATCAGATTCGGAAAA+TGG 0.226467 tig0000674:+58394 Msa1335750:CDS
ATACAGAAGCAGTTGAAAAT+TGG 0.252051 tig0000674:+63633 Msa1335750:intron
AAAATTGGAAGAAGTTAAAT+TGG 0.254431 tig0000674:+63664 Msa1335750:CDS
ATTCGTATATCAAAATTCTT+AGG 0.287997 tig0000674:-65810 None:intergenic
ACCAGCGAAGTTAATGAAAT+TGG 0.289670 tig0000674:+58448 Msa1335750:CDS
CCTGATGGTGCAGAGGATTT+AGG 0.291489 tig0000674:+64007 Msa1335750:CDS
TTCAACGTTAAAAGTTATTT+GGG 0.324118 tig0000674:-57859 None:intergenic
TGGAAGAATCGAATCGAATT+AGG 0.327853 tig0000674:+58414 Msa1335750:CDS
ATGACGGTTCTGCGGTTAGA+TGG 0.328426 tig0000674:+64621 Msa1335750:CDS
GCTACCTTGTAGATTATTAC+AGG 0.337269 tig0000674:+65610 Msa1335750:three_prime_UTR
TTGAATAGCAGAAGCAATAA+TGG 0.346033 tig0000674:+58665 Msa1335750:CDS
CTATCCTTAAAATTTAGTTT+TGG 0.353734 tig0000674:-65449 None:intergenic
TGGTGGAATGAAGATAATAA+AGG 0.370093 tig0000674:+57939 Msa1335750:five_prime_UTR
TGTCTGAGAGTGGTGGGATT+TGG 0.371400 tig0000674:-57685 None:intergenic
GAGAGTGGTGGGATTTGGTT+TGG 0.380355 tig0000674:-57680 None:intergenic
TTTGGATCAACTAATCATTT+CGG 0.389967 tig0000674:-57662 None:intergenic
TAAAAGCTTTGGAGTCTGAT+TGG 0.401742 tig0000674:+63915 Msa1335750:CDS
TATCCAAAGGCCAATTTCTT+CGG 0.402468 tig0000674:-63948 None:intergenic
GCTGTGCTTGCCGAAGAAAT+TGG 0.403708 tig0000674:+63938 Msa1335750:CDS
AGATTCTTGGACGGTGTAAT+CGG 0.408270 tig0000674:+65884 Msa1335750:three_prime_UTR
ATCTCATGATTCATTGTAAT+AGG 0.411432 tig0000674:+65979 Msa1335750:three_prime_UTR
ACCAATTTCATTAACTTCGC+TGG 0.413001 tig0000674:-58449 None:intergenic
ACTCTATTACACATGTAGTT+GGG 0.414897 tig0000674:-65858 None:intergenic
ACCTGCCTCTTCGTGAGAAA+TGG 0.421670 tig0000674:-63714 None:intergenic
TGTGAATTTCGATACCATTC+GGG 0.422775 tig0000674:-65476 None:intergenic
AACTCTATTACACATGTAGT+TGG 0.423494 tig0000674:-65859 None:intergenic
TGTGAATCGAAACGTGGGAT+TGG 0.425535 tig0000674:-57754 None:intergenic
ATGTGAATTTCGATACCATT+CGG 0.427345 tig0000674:-65477 None:intergenic
GTGATTGTTCCATGGGCCTC+TGG 0.427846 tig0000674:+65512 Msa1335750:CDS
GATTTGTTAGAGGTGGGTTA+AGG 0.428795 tig0000674:-57795 None:intergenic
CAGGCACTCAAAGCTAGCTT+TGG 0.432487 tig0000674:+65629 Msa1335750:three_prime_UTR
AGGGATGCTAGTAAAAGCTT+TGG 0.435482 tig0000674:+63904 Msa1335750:intron
TGATTGCTGTCAAGCTTGCT+TGG 0.436458 tig0000674:+64673 Msa1335750:CDS
AAAAGCTTTGGAGTCTGATT+GGG 0.441965 tig0000674:+63916 Msa1335750:CDS
TGACGGTTCTGCGGTTAGAT+GGG 0.442080 tig0000674:+64622 Msa1335750:CDS
AAATAGATCGATCTATGAAA+AGG 0.442748 tig0000674:-57831 None:intergenic
CCTAAATCCTCTGCACCATC+AGG 0.447349 tig0000674:-64007 None:intergenic
GGTGGAATGAAGATAATAAA+GGG 0.448672 tig0000674:+57940 Msa1335750:five_prime_UTR
TCTACATTCACAACCTCAAC+AGG 0.453666 tig0000674:-63971 None:intergenic
CTGCACCAGTGATTGTTCCA+TGG 0.458082 tig0000674:+65504 Msa1335750:CDS
CTCGCTCCATAGCAATGCCT+TGG 0.461557 tig0000674:-58697 None:intergenic
TGCACCAGTGATTGTTCCAT+GGG 0.469487 tig0000674:+65505 Msa1335750:CDS
GCAACTCAACCTCCGTACTT+TGG 0.472261 tig0000674:-58589 None:intergenic
TGTTGTTGTCTGAGAGTGGT+GGG 0.475032 tig0000674:-57691 None:intergenic
GCTTCTCTTTATATCTACTC+TGG 0.477025 tig0000674:+58103 Msa1335750:CDS
TTGCCGAAGAAATTGGCCTT+TGG 0.480285 tig0000674:+63945 Msa1335750:CDS
AACCTAGGATTTGTTAGAGG+TGG 0.483864 tig0000674:-57802 None:intergenic
TACCATACCGCATTCTGTGC+TGG 0.489406 tig0000674:-65563 None:intergenic
AAGATAATAAAGGGTTATGA+TGG 0.490304 tig0000674:+57949 Msa1335750:exon
AATAGATCGATCTATGAAAA+GGG 0.491880 tig0000674:-57830 None:intergenic
TGTATAAACCAGATCAGATT+CGG 0.492887 tig0000674:+58387 Msa1335750:CDS
AAGAACCTAGGATTTGTTAG+AGG 0.493839 tig0000674:-57805 None:intergenic
TTCGTGAGAAATGGTAGAGT+TGG 0.509212 tig0000674:-63705 None:intergenic
AGAGGTGGGTTAAGGTTACT+GGG 0.510318 tig0000674:-57787 None:intergenic
TCGCTCCATAGCAATGCCTT+GGG 0.512530 tig0000674:-58696 None:intergenic
ACCATTTCTCACGAAGAGGC+AGG 0.512973 tig0000674:+63713 Msa1335750:CDS
AAAAGGTGAAGGAATTAGAA+GGG 0.517663 tig0000674:+58555 Msa1335750:intron
ACCTAGGATTTGTTAGAGGT+GGG 0.518443 tig0000674:-57801 None:intergenic
CTTCTTTGGCACGTTTAGCA+TGG 0.526328 tig0000674:-64697 None:intergenic
TTGTTGTTGTCTGAGAGTGG+TGG 0.526859 tig0000674:-57692 None:intergenic
CATGCTAAACGTGCCAAAGA+AGG 0.528974 tig0000674:+64698 Msa1335750:CDS
ATCTTCTGTTTCAAGTGCTG+AGG 0.533874 tig0000674:-58611 None:intergenic
CAACTTCAATCAAGAGGAGG+TGG 0.534323 tig0000674:+57992 Msa1335750:CDS
AAAAGAATCAAGGGCAATGG+TGG 0.536947 tig0000674:+57922 Msa1335750:five_prime_UTR
AATCAAGAGGAGGTGGAAAG+TGG 0.537407 tig0000674:+57999 Msa1335750:CDS
CTCTATTACACATGTAGTTG+GGG 0.542002 tig0000674:-65857 None:intergenic
GAAGTTAAATTGGTTTCTGC+GGG 0.545448 tig0000674:+63674 Msa1335750:CDS
GGAACAATCACTGGTGCAGA+TGG 0.546225 tig0000674:-65500 None:intergenic
GAGGCCCATGGAACAATCAC+TGG 0.549857 tig0000674:-65509 None:intergenic
TATGATGGCAAGAAGTGAGT+GGG 0.550720 tig0000674:+57964 Msa1335750:exon
GTATATCAAAATTCTTAGGA+TGG 0.551846 tig0000674:-65806 None:intergenic
ACCCACCTCTAACAAATCCT+AGG 0.552538 tig0000674:+57800 Msa1335750:five_prime_UTR
AATAATCTACAAGGTAGCTC+CGG 0.557876 tig0000674:-65605 None:intergenic
TCACTCCCAAGGCATTGCTA+TGG 0.562744 tig0000674:+58691 Msa1335750:CDS
GACGGTTCTGCGGTTAGATG+GGG 0.565108 tig0000674:+64623 Msa1335750:CDS
AGAAGTTAAATTGGTTTCTG+CGG 0.567216 tig0000674:+63673 Msa1335750:CDS
TTAAATTGGTTTCTGCGGGA+AGG 0.567960 tig0000674:+63678 Msa1335750:CDS
TAACACGAGCAATCTAAGTC+CGG 0.570660 tig0000674:+65586 Msa1335750:three_prime_UTR
ACAACAAATAGCTTTGACAA+AGG 0.574459 tig0000674:-65681 None:intergenic
CTTTCTTTACGTAACTGATG+AGG 0.577699 tig0000674:+65934 Msa1335750:three_prime_UTR
TTGTTGTTGTTGTCTGAGAG+TGG 0.577750 tig0000674:-57695 None:intergenic
CTCTACCATTTCTCACGAAG+AGG 0.580109 tig0000674:+63709 Msa1335750:CDS
ATCAAGAGGAGGTGGAAAGT+GGG 0.584522 tig0000674:+58000 Msa1335750:CDS
ATGATGGCAAGAAGTGAGTG+GGG 0.597932 tig0000674:+57965 Msa1335750:CDS
TTCTTGGACGGTGTAATCGG+AGG 0.602263 tig0000674:+65887 Msa1335750:three_prime_UTR
ATGAAAAGGGACAAGAACCT+AGG 0.602666 tig0000674:-57817 None:intergenic
AACCAGCACAGAATGCGGTA+TGG 0.603857 tig0000674:+65561 Msa1335750:three_prime_UTR
AGTGCCTGTAATAATCTACA+AGG 0.610237 tig0000674:-65614 None:intergenic
TGGCCTTTGGATACCTGTTG+AGG 0.611467 tig0000674:+63958 Msa1335750:CDS
ACATGAATTATATTATGAGT+AGG 0.614114 tig0000674:-66012 None:intergenic
TTATGATGGCAAGAAGTGAG+TGG 0.618854 tig0000674:+57963 Msa1335750:exon
AGCAGTTGAAAATTGGCGCA+AGG 0.619149 tig0000674:+63640 Msa1335750:CDS
GAACTTCATACAGATTATGA+CGG 0.619220 tig0000674:+64605 Msa1335750:intron
AAAGGTGAAGGAATTAGAAG+GGG 0.620122 tig0000674:+58556 Msa1335750:intron
ACCTCGTGTGAATCGAAACG+TGG 0.622175 tig0000674:-57760 None:intergenic
GCAACAACTCCAGAGGCCCA+TGG 0.623742 tig0000674:-65521 None:intergenic
CAAGGCATTGCTATGGAGCG+AGG 0.630111 tig0000674:+58698 Msa1335750:CDS
TGACAAACCTGATGGTGCAG+AGG 0.630542 tig0000674:+64000 Msa1335750:CDS
AATAATGGATCTCACTCCCA+AGG 0.631172 tig0000674:+58680 Msa1335750:CDS
GGGATTCAACTTCAATCAAG+AGG 0.638194 tig0000674:+57986 Msa1335750:CDS
TACAGATTATGACGGTTCTG+CGG 0.638373 tig0000674:+64613 Msa1335750:intron
ACGAAGACAATAGAGAGCAA+TGG 0.644413 tig0000674:-58071 None:intergenic
GAAACAGAAGATAATTGATG+AGG 0.645919 tig0000674:+58622 Msa1335750:CDS
TATTTGTCAAAGCATGACAA+AGG 0.655322 tig0000674:-65657 None:intergenic
TTAAGGATAGGTATCCCGAA+TGG 0.659919 tig0000674:+65462 Msa1335750:CDS
ATAATAACCAGCACAGAATG+CGG 0.662076 tig0000674:+65556 Msa1335750:three_prime_UTR
CAACCTCAACAGGTATCCAA+AGG 0.662747 tig0000674:-63961 None:intergenic
TGATGGCAAGAAGTGAGTGG+GGG 0.665004 tig0000674:+57966 Msa1335750:CDS
CCCACGTTTCGATTCACACG+AGG 0.669922 tig0000674:+57759 Msa1335750:five_prime_UTR
ATTCAACTTCAATCAAGAGG+AGG 0.681950 tig0000674:+57989 Msa1335750:CDS
TCAAGCAGCAACAACTCCAG+AGG 0.687351 tig0000674:-65528 None:intergenic
GAACATAATGACAAACCTGA+TGG 0.690687 tig0000674:+63992 Msa1335750:CDS
CCTCGTGTGAATCGAAACGT+GGG 0.696328 tig0000674:-57759 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAAAACTTTTTTTTTTTTG+AGG - tig0000674:65137-65156 None:intergenic 10.0%
!!! TTTTTGTTTTAAGTAAAAAC+AGG - tig0000674:58224-58243 None:intergenic 15.0%
!!! TATTTTTTTCTTTTGGATAT+AGG + tig0000674:60631-60650 Msa1335750:intron 15.0%
!!! TTTTCATGATTTATTTATCT+AGG + tig0000674:62306-62325 Msa1335750:intron 15.0%
!! TTTCATGATTTATTTATCTA+GGG + tig0000674:62307-62326 Msa1335750:intron 15.0%
!! AATAAAAATAAAGTGAAAGT+TGG + tig0000674:62460-62479 Msa1335750:intron 15.0%
!!! ATTTATTCTGTTTTAATCTT+AGG + tig0000674:63035-63054 Msa1335750:intron 15.0%
!! TTCTTTAAATCTTTACATAT+TGG - tig0000674:63432-63451 None:intergenic 15.0%
!!! ATATTTTTCCATCAAAATTA+GGG + tig0000674:64155-64174 Msa1335750:intron 15.0%
!!! AAATGATTTTTTTAGCAAAA+TGG + tig0000674:64398-64417 Msa1335750:intron 15.0%
!! TGAAAAAAAATGCAATATTT+GGG + tig0000674:64721-64740 Msa1335750:CDS 15.0%
!!! TCAAAATTAATTAAGCATTT+TGG - tig0000674:65273-65292 None:intergenic 15.0%
!! TTCAACGTTAAAAGTTATTT+GGG - tig0000674:57862-57881 None:intergenic 20.0%
!! TTTCAACGTTAAAAGTTATT+TGG - tig0000674:57863-57882 None:intergenic 20.0%
!! AAAAGACTAAAACAAACTAA+AGG + tig0000674:58240-58259 Msa1335750:intron 20.0%
!! AAAGACTAAAACAAACTAAA+GGG + tig0000674:58241-58260 Msa1335750:intron 20.0%
!!! TCCAAAAAATTGTGTTTTTA+AGG + tig0000674:58267-58286 Msa1335750:intron 20.0%
!!! ACCTTAAAAACACAATTTTT+TGG - tig0000674:58271-58290 None:intergenic 20.0%
!!! AATTGTGTTTTTAAGGTTTA+TGG + tig0000674:58274-58293 Msa1335750:intron 20.0%
!!! GTTTCTTTTATAGTTTTTCT+AGG - tig0000674:59242-59261 None:intergenic 20.0%
!! TTTATGTTTCAAGCATAAAT+TGG + tig0000674:59853-59872 Msa1335750:intron 20.0%
!! TCACTTTATATAACTTTGAA+AGG + tig0000674:60095-60114 Msa1335750:intron 20.0%
!!! TTATATAACTTTGAAAGGAA+AGG + tig0000674:60100-60119 Msa1335750:intron 20.0%
!! CATAATATATCTATTCAATG+TGG - tig0000674:60246-60265 None:intergenic 20.0%
!! CACATTGAATAGATATATTA+TGG + tig0000674:60244-60263 Msa1335750:intron 20.0%
!! AGTTTAGTAAAATTGAAGTA+TGG + tig0000674:60674-60693 Msa1335750:intron 20.0%
!!! CTTAGTTTGAAAACATTTTT+TGG + tig0000674:60739-60758 Msa1335750:intron 20.0%
!!! TTATCAAAACAATTGACTTT+GGG + tig0000674:61475-61494 Msa1335750:intron 20.0%
!! TGTGTATATTATAATCTTGT+AGG + tig0000674:61712-61731 Msa1335750:intron 20.0%
!! AATGAGATGTAACTTAATAA+AGG - tig0000674:61988-62007 None:intergenic 20.0%
!! CTAAACTATAATTCTGAATT+AGG - tig0000674:62178-62197 None:intergenic 20.0%
!!! TATATTTTAGTATGATGTGT+AGG + tig0000674:62205-62224 Msa1335750:intron 20.0%
!! ATAATGCATAACAAAATTGA+AGG + tig0000674:62707-62726 Msa1335750:intron 20.0%
!! AAATCTCTTTCAAATTCTTA+GGG + tig0000674:62835-62854 Msa1335750:intron 20.0%
!! AACATAAAAAAGAAGCTAAA+GGG - tig0000674:62995-63014 None:intergenic 20.0%
!! AAACATAAAAAAGAAGCTAA+AGG - tig0000674:62996-63015 None:intergenic 20.0%
!! AAAATTGGAAGAAGTTAAAT+TGG + tig0000674:63664-63683 Msa1335750:CDS 20.0%
!!! CATATTTTTCCATCAAAATT+AGG + tig0000674:64154-64173 Msa1335750:intron 20.0%
!!! ATTAGGAAACAAATAGATTT+TGG + tig0000674:64338-64357 Msa1335750:intron 20.0%
!!! TGAAATAGATTTTCATTTTG+AGG + tig0000674:64371-64390 Msa1335750:intron 20.0%
!! AAAAAAAATCCAAAACAAAC+AGG + tig0000674:64496-64515 Msa1335750:intron 20.0%
!! ACAGTAAATACAAAGATTAA+GGG - tig0000674:64522-64541 None:intergenic 20.0%
!! GTGAAAAAAAATGCAATATT+TGG + tig0000674:64720-64739 Msa1335750:CDS 20.0%
!!! GTTTCCTTTTTTCTATATAA+AGG + tig0000674:64844-64863 Msa1335750:intron 20.0%
!!! TTCACCTTATTTTTTTTTGA+TGG + tig0000674:64961-64980 Msa1335750:intron 20.0%
!! ACGAAAACAAAAAAAAAACA+CGG - tig0000674:65351-65370 None:intergenic 20.0%
!!! GAAACCAAAACTAAATTTTA+AGG + tig0000674:65445-65464 Msa1335750:CDS 20.0%
!!! CTATCCTTAAAATTTAGTTT+TGG - tig0000674:65452-65471 None:intergenic 20.0%
!!! CAAAACTAAATTTTAAGGAT+AGG + tig0000674:65450-65469 Msa1335750:CDS 20.0%
!!! CCTTTTTAAATTAATGAGAT+GGG + tig0000674:65718-65737 Msa1335750:three_prime_UTR 20.0%
!!! CTTTTTAAATTAATGAGATG+GGG + tig0000674:65719-65738 Msa1335750:three_prime_UTR 20.0%
!!! TTTTTAAATTAATGAGATGG+GGG + tig0000674:65720-65739 Msa1335750:three_prime_UTR 20.0%
!! ATTCGTATATCAAAATTCTT+AGG - tig0000674:65813-65832 None:intergenic 20.0%
!!! TAAGAATTTTGATATACGAA+TGG + tig0000674:65812-65831 Msa1335750:three_prime_UTR 20.0%
!! ACATGAATTATATTATGAGT+AGG - tig0000674:66015-66034 None:intergenic 20.0%
! TTTGGATCAACTAATCATTT+CGG - tig0000674:57665-57684 None:intergenic 25.0%
! AATAGATCGATCTATGAAAA+GGG - tig0000674:57833-57852 None:intergenic 25.0%
! AAATAGATCGATCTATGAAA+AGG - tig0000674:57834-57853 None:intergenic 25.0%
!! TTTCATAGATCGATCTATTT+TGG + tig0000674:57834-57853 Msa1335750:five_prime_UTR 25.0%
! AAGATAATAAAGGGTTATGA+TGG + tig0000674:57949-57968 Msa1335750:exon 25.0%
! AACATGACATGCTTAAAAAA+AGG - tig0000674:58163-58182 None:intergenic 25.0%
!!! ATTTTTTAGACATCCCAAAA+TGG + tig0000674:58300-58319 Msa1335750:intron 25.0%
! ATGAATACTTTGTGTGAAAA+AGG + tig0000674:58538-58557 Msa1335750:intron 25.0%
! TAAAAACTTGACACAACAAA+TGG + tig0000674:58825-58844 Msa1335750:intron 25.0%
! AAAAACTTGACACAACAAAT+GGG + tig0000674:58826-58845 Msa1335750:intron 25.0%
!! TGATTGCAATCTTATTTATC+TGG + tig0000674:58986-59005 Msa1335750:intron 25.0%
! AATAAAGAGATGAAGATGTT+TGG + tig0000674:59022-59041 Msa1335750:intron 25.0%
! TGGTATATGATAGAACATTA+TGG + tig0000674:59303-59322 Msa1335750:intron 25.0%
! TACAAAATGTTGTCAAATAG+TGG - tig0000674:59467-59486 None:intergenic 25.0%
!!! TTTTTTCTTCTAGAGTAAAC+TGG + tig0000674:59826-59845 Msa1335750:intron 25.0%
!!! GACATGTTTTTTTCTTTCTT+TGG + tig0000674:59973-59992 Msa1335750:intron 25.0%
!!! TGTTTTTTTCTTTCTTTGGA+TGG + tig0000674:59977-59996 Msa1335750:intron 25.0%
! GTTCAATTATTCAAATGTCT+AGG + tig0000674:60021-60040 Msa1335750:intron 25.0%
! AATATACCCAGAAAAAGTTT+AGG - tig0000674:60064-60083 None:intergenic 25.0%
! TATATAAAGTGATTCTCATG+AGG - tig0000674:60087-60106 None:intergenic 25.0%
! GTTGATATCATCTAAGAATT+TGG - tig0000674:60345-60364 None:intergenic 25.0%
! CTCCTTCTAAATATGTTATT+GGG + tig0000674:60366-60385 Msa1335750:intron 25.0%
!!! GCTTGAGTATTTTTTTCTTT+TGG + tig0000674:60624-60643 Msa1335750:intron 25.0%
! TTAGTAAAATTGAAGTATGG+TGG + tig0000674:60677-60696 Msa1335750:intron 25.0%
! TGAAAATATCATATCTAACC+TGG + tig0000674:60763-60782 Msa1335750:intron 25.0%
!! TTTGTTGTATACAACTATCT+TGG + tig0000674:61078-61097 Msa1335750:intron 25.0%
! TTGTTGTATACAACTATCTT+GGG + tig0000674:61079-61098 Msa1335750:intron 25.0%
! TAAGAAAGATGAATCTTGAA+TGG + tig0000674:61317-61336 Msa1335750:intron 25.0%
! TGTAAGAGTTAAATTCAAGA+TGG - tig0000674:61357-61376 None:intergenic 25.0%
!! CTTATCAAAACAATTGACTT+TGG + tig0000674:61474-61493 Msa1335750:intron 25.0%
!! TATCAAAACAATTGACTTTG+GGG + tig0000674:61476-61495 Msa1335750:intron 25.0%
!!! TTTTTTTCCATTCTCTGAAA+AGG + tig0000674:61539-61558 Msa1335750:intron 25.0%
!!! TCATTTTTGTGTTTAGTCTT+TGG - tig0000674:61909-61928 None:intergenic 25.0%
! CAACTTCTTAATTGAACATT+TGG + tig0000674:62360-62379 Msa1335750:intron 25.0%
! TTAAATGTTGTGAACAAACA+TGG - tig0000674:62417-62436 None:intergenic 25.0%
! TGCTGTTAAATTATGAAAGA+TGG + tig0000674:62537-62556 Msa1335750:intron 25.0%
! GCTGTTAAATTATGAAAGAT+GGG + tig0000674:62538-62557 Msa1335750:intron 25.0%
! TTAAATTATGAAAGATGGGA+GGG + tig0000674:62542-62561 Msa1335750:intron 25.0%
! GAAATCTCTTTCAAATTCTT+AGG + tig0000674:62834-62853 Msa1335750:intron 25.0%
! TGTAAATAATCTCACTTACT+AGG - tig0000674:62922-62941 None:intergenic 25.0%
! AGTAAGTGAGATTATTTACA+TGG + tig0000674:62922-62941 Msa1335750:intron 25.0%
! GTAATAGAAAGCTAAAACAT+TGG - tig0000674:63090-63109 None:intergenic 25.0%
!!! TCGTTTTTTTTCCTTCATTT+TGG - tig0000674:63298-63317 None:intergenic 25.0%
! AAAATGAAGGAAAAAAAACG+AGG + tig0000674:63297-63316 Msa1335750:intron 25.0%
! AAATGAAGGAAAAAAAACGA+GGG + tig0000674:63298-63317 Msa1335750:intron 25.0%
!! AGTGAGTTGAAATAAATATC+AGG - tig0000674:63875-63894 None:intergenic 25.0%
! CACAGTAAATACAAAGATTA+AGG - tig0000674:64523-64542 None:intergenic 25.0%
! TATTTATCAGCACAAACATA+TGG + tig0000674:64781-64800 Msa1335750:intron 25.0%
! AAAAGGAAACATATTCATCA+GGG - tig0000674:64834-64853 None:intergenic 25.0%
! AAAAAGGAAACATATTCATC+AGG - tig0000674:64835-64854 None:intergenic 25.0%
! AGGTCCTTTATATAGAAAAA+AGG - tig0000674:64851-64870 None:intergenic 25.0%
! TTGTAAAGCTTACGAAAATA+AGG - tig0000674:65066-65085 None:intergenic 25.0%
!!! TTGCAAAATAGAAGTATCAA+AGG - tig0000674:65297-65316 None:intergenic 25.0%
!! GCCTTTTTAAATTAATGAGA+TGG + tig0000674:65717-65736 Msa1335750:three_prime_UTR 25.0%
! CCCATCTCATTAATTTAAAA+AGG - tig0000674:65721-65740 None:intergenic 25.0%
! GTATATCAAAATTCTTAGGA+TGG - tig0000674:65809-65828 None:intergenic 25.0%
!!! GTAATAGAGTTTTAGATTCT+TGG + tig0000674:65871-65890 Msa1335750:three_prime_UTR 25.0%
! ATCTCATGATTCATTGTAAT+AGG + tig0000674:65979-65998 Msa1335750:three_prime_UTR 25.0%
AGGAAGAGAAAAAGAATCAA+GGG + tig0000674:57913-57932 Msa1335750:five_prime_UTR 30.0%
TGGTGGAATGAAGATAATAA+AGG + tig0000674:57939-57958 Msa1335750:five_prime_UTR 30.0%
GGTGGAATGAAGATAATAAA+GGG + tig0000674:57940-57959 Msa1335750:five_prime_UTR 30.0%
! AGTCTAAGTCTTTCCATTTT+GGG - tig0000674:58316-58335 None:intergenic 30.0%
! TAGTCTAAGTCTTTCCATTT+TGG - tig0000674:58317-58336 None:intergenic 30.0%
TGTATAAACCAGATCAGATT+CGG + tig0000674:58387-58406 Msa1335750:CDS 30.0%
AAAAAGGTGAAGGAATTAGA+AGG + tig0000674:58554-58573 Msa1335750:intron 30.0%
AAAAGGTGAAGGAATTAGAA+GGG + tig0000674:58555-58574 Msa1335750:intron 30.0%
GAAACAGAAGATAATTGATG+AGG + tig0000674:58622-58641 Msa1335750:CDS 30.0%
TTGAATAGCAGAAGCAATAA+TGG + tig0000674:58665-58684 Msa1335750:CDS 30.0%
TCTCAGTGTTAAATCATAGA+AGG - tig0000674:58766-58785 None:intergenic 30.0%
!!! GTGTCAAGTTTTTAGCTTAA+CGG - tig0000674:58819-58838 None:intergenic 30.0%
TCTCTACGTAAAAATCAAGT+TGG - tig0000674:58936-58955 None:intergenic 30.0%
ATAGCATTAAAGAGAGAGTT+GGG + tig0000674:59080-59099 Msa1335750:intron 30.0%
ACCTATAGTAAAAACGATTG+TGG + tig0000674:59109-59128 Msa1335750:intron 30.0%
!! TCCACAATCGTTTTTACTAT+AGG - tig0000674:59113-59132 None:intergenic 30.0%
TAAAAACGATTGTGGAAACT+AGG + tig0000674:59117-59136 Msa1335750:intron 30.0%
AAACTAGGCTTAGATGATTT+GGG + tig0000674:59132-59151 Msa1335750:intron 30.0%
AGATCTAGAGATTAATGAGT+TGG + tig0000674:59271-59290 Msa1335750:intron 30.0%
! TAATGAGTTGGATGGAAATA+TGG + tig0000674:59283-59302 Msa1335750:intron 30.0%
TTGTACTAAATAGCATATCG+CGG + tig0000674:59482-59501 Msa1335750:intron 30.0%
AGACATCATGATATTAAGCA+AGG + tig0000674:59585-59604 Msa1335750:intron 30.0%
TAAAGATCAATGTGCTCTTA+AGG - tig0000674:59669-59688 None:intergenic 30.0%
!! TTTTTCAGACCTAATAACCA+TGG - tig0000674:59718-59737 None:intergenic 30.0%
!!! TGGATGGTATTGATTGATTT+TGG + tig0000674:59993-60012 Msa1335750:intron 30.0%
GACATTTGAATAATTGAACC+AGG - tig0000674:60020-60039 None:intergenic 30.0%
!! TGATTGACCTAAACTTTTTC+TGG + tig0000674:60054-60073 Msa1335750:intron 30.0%
!! GATTGACCTAAACTTTTTCT+GGG + tig0000674:60055-60074 Msa1335750:intron 30.0%
GCTCCTTCTAAATATGTTAT+TGG + tig0000674:60365-60384 Msa1335750:intron 30.0%
GACCCAATAACATATTTAGA+AGG - tig0000674:60371-60390 None:intergenic 30.0%
TCAGAACATGGAAAAAAAAC+AGG - tig0000674:60395-60414 None:intergenic 30.0%
TGTCTTAGAGTTTGATCTTT+AGG - tig0000674:60602-60621 None:intergenic 30.0%
!! AAAGATCAAACTCTAAGACA+TGG + tig0000674:60602-60621 Msa1335750:intron 30.0%
!! TATAGGTTTTAGTAGAAGTG+TGG + tig0000674:60648-60667 Msa1335750:intron 30.0%
! TAAAATTGAAGTATGGTGGA+AGG + tig0000674:60681-60700 Msa1335750:intron 30.0%
! AAAATTGAAGTATGGTGGAA+GGG + tig0000674:60682-60701 Msa1335750:intron 30.0%
GAAGGGACAAAAGTAAATAT+GGG + tig0000674:60699-60718 Msa1335750:intron 30.0%
AAGGGACAAAAGTAAATATG+GGG + tig0000674:60700-60719 Msa1335750:intron 30.0%
CAAAAGTAAATATGGGGTTA+TGG + tig0000674:60706-60725 Msa1335750:intron 30.0%
AACCTGGTATTAGTAATTGA+TGG + tig0000674:60779-60798 Msa1335750:intron 30.0%
TACCATCAATTACTAATACC+AGG - tig0000674:60784-60803 None:intergenic 30.0%
AGTTCATAGAGAACAAAATG+GGG - tig0000674:60807-60826 None:intergenic 30.0%
GAGTTCATAGAGAACAAAAT+GGG - tig0000674:60808-60827 None:intergenic 30.0%
TGAGTTCATAGAGAACAAAA+TGG - tig0000674:60809-60828 None:intergenic 30.0%
! TTTTGTTCTCTATGAACTCA+AGG + tig0000674:60809-60828 Msa1335750:intron 30.0%
ATAAAAGCTGTGAATCACTT+CGG + tig0000674:60890-60909 Msa1335750:intron 30.0%
TCATAGAATGTTGTGAGTAT+TGG - tig0000674:60951-60970 None:intergenic 30.0%
CTCACAACATTCTATGATTA+AGG + tig0000674:60954-60973 Msa1335750:intron 30.0%
ACAACATTCTATGATTAAGG+TGG + tig0000674:60957-60976 Msa1335750:intron 30.0%
CAACATTCTATGATTAAGGT+GGG + tig0000674:60958-60977 Msa1335750:intron 30.0%
AAACAGTTACATAGCAATCA+TGG - tig0000674:61049-61068 None:intergenic 30.0%
AATCACGCTTACATCAAATT+GGG - tig0000674:61185-61204 None:intergenic 30.0%
TAATCACGCTTACATCAAAT+TGG - tig0000674:61186-61205 None:intergenic 30.0%
! ATCAAAACAATTGACTTTGG+GGG + tig0000674:61477-61496 Msa1335750:intron 30.0%
!! ATTTATAGACTTGTTGACCA+TGG - tig0000674:61953-61972 None:intergenic 30.0%
TGGTCAACAAGTCTATAAAT+TGG + tig0000674:61953-61972 Msa1335750:intron 30.0%
! ACCTTTTTCTCATTGCTTAT+GGG + tig0000674:62150-62169 Msa1335750:intron 30.0%
TGTAGACCAACAAATGTATA+TGG + tig0000674:62512-62531 Msa1335750:intron 30.0%
GTTAAATTATGAAAGATGGG+AGG + tig0000674:62541-62560 Msa1335750:intron 30.0%
TAAATTATGAAAGATGGGAG+GGG + tig0000674:62543-62562 Msa1335750:intron 30.0%
GACTGGACATTAAAAAAACT+AGG - tig0000674:62602-62621 None:intergenic 30.0%
ATGCATAACAAAATTGAAGG+AGG + tig0000674:62710-62729 Msa1335750:intron 30.0%
TAATCTCACTTACTAGGAAA+AGG - tig0000674:62916-62935 None:intergenic 30.0%
AAGGAATATAGAAGATCTTC+CGG - tig0000674:63358-63377 None:intergenic 30.0%
!! TTTTTGTTGGTCTAACACAA+AGG - tig0000674:63377-63396 None:intergenic 30.0%
GTGTTAGACCAACAAAAAAA+AGG + tig0000674:63379-63398 Msa1335750:intron 30.0%
!!! TTGGGATTCCTTTTTTTTGT+TGG - tig0000674:63390-63409 None:intergenic 30.0%
GACTAATAGTTGCAAAAGAT+GGG - tig0000674:63522-63541 None:intergenic 30.0%
TGACTAATAGTTGCAAAAGA+TGG - tig0000674:63523-63542 None:intergenic 30.0%
AACAGTAATTCTGTGTAATC+TGG + tig0000674:63580-63599 Msa1335750:intron 30.0%
ATACAGAAGCAGTTGAAAAT+TGG + tig0000674:63633-63652 Msa1335750:intron 30.0%
! AGAAGTTAAATTGGTTTCTG+CGG + tig0000674:63673-63692 Msa1335750:CDS 30.0%
TTCAACTCACTATTACTACT+AGG + tig0000674:63884-63903 Msa1335750:intron 30.0%
TCAACTCACTATTACTACTA+GGG + tig0000674:63885-63904 Msa1335750:intron 30.0%
!! TTGTTTGGATAGTTGTTTTC+TGG + tig0000674:64087-64106 Msa1335750:intron 30.0%
TCTATTTGTTTCCTAATGCA+AGG - tig0000674:64335-64354 None:intergenic 30.0%
TCATAATCTGTATGAAGTTC+AGG - tig0000674:64605-64624 None:intergenic 30.0%
GAACTTCATACAGATTATGA+CGG + tig0000674:64605-64624 Msa1335750:intron 30.0%
!!! GCATTTTTTTTCACCTTCTT+TGG - tig0000674:64714-64733 None:intergenic 30.0%
! TGTTTGTGCTGATAAATATC+TGG - tig0000674:64779-64798 None:intergenic 30.0%
!!! CCTTATTTTTTTTTGATGGC+CGG + tig0000674:64965-64984 Msa1335750:intron 30.0%
!!! CTTATTTTTTTTTGATGGCC+GGG + tig0000674:64966-64985 Msa1335750:intron 30.0%
!!! TTATTTTTTTTTGATGGCCG+GGG + tig0000674:64967-64986 Msa1335750:intron 30.0%
! ACCTTGCATATTTTATGCAT+TGG + tig0000674:65002-65021 Msa1335750:intron 30.0%
ATGTGAATTTCGATACCATT+CGG - tig0000674:65480-65499 None:intergenic 30.0%
TATTTGTCAAAGCATGACAA+AGG - tig0000674:65660-65679 None:intergenic 30.0%
!! ACAACAAATAGCTTTGACAA+AGG - tig0000674:65684-65703 None:intergenic 30.0%
!! TAAAGGAAATTTTTCGGACA+TGG + tig0000674:65745-65764 Msa1335750:three_prime_UTR 30.0%
!! AAATTTTTCGGACATGGTTT+TGG + tig0000674:65751-65770 Msa1335750:three_prime_UTR 30.0%
ACTCTATTACACATGTAGTT+GGG - tig0000674:65861-65880 None:intergenic 30.0%
AACTCTATTACACATGTAGT+TGG - tig0000674:65862-65881 None:intergenic 30.0%
!!! TAGAGTTTTAGATTCTTGGA+CGG + tig0000674:65875-65894 Msa1335750:three_prime_UTR 30.0%
!! AAGAACCTAGGATTTGTTAG+AGG - tig0000674:57808-57827 None:intergenic 35.0%
!!! GTTGCAATCTTTTTTGTCTG+AGG + tig0000674:57893-57912 Msa1335750:five_prime_UTR 35.0%
GAGGAAGAGAAAAAGAATCA+AGG + tig0000674:57912-57931 Msa1335750:five_prime_UTR 35.0%
AGAAAAAGAATCAAGGGCAA+TGG + tig0000674:57919-57938 Msa1335750:five_prime_UTR 35.0%
ATTCAACTTCAATCAAGAGG+AGG + tig0000674:57989-58008 Msa1335750:CDS 35.0%
GCTTCTCTTTATATCTACTC+TGG + tig0000674:58103-58122 Msa1335750:CDS 35.0%
!! GTTGTGTGATTTTTCAGTTG+TGG + tig0000674:58364-58383 Msa1335750:intron 35.0%
TGGAAGAATCGAATCGAATT+AGG + tig0000674:58414-58433 Msa1335750:CDS 35.0%
ACCAGCGAAGTTAATGAAAT+TGG + tig0000674:58448-58467 Msa1335750:CDS 35.0%
ACCAATTTCATTAACTTCGC+TGG - tig0000674:58452-58471 None:intergenic 35.0%
!! GTAATCAGTTGTTGTTTACG+TGG + tig0000674:58487-58506 Msa1335750:intron 35.0%
ACTTTGTGTGAAAAAGGTGA+AGG + tig0000674:58544-58563 Msa1335750:intron 35.0%
AAAGGTGAAGGAATTAGAAG+GGG + tig0000674:58556-58575 Msa1335750:intron 35.0%
CAACAAATGGGAATATGAGA+TGG + tig0000674:58838-58857 Msa1335750:intron 35.0%
GAATATGAGATGGTTTGACT+TGG + tig0000674:58848-58867 Msa1335750:intron 35.0%
! ACATGATCGATTTCATCTGT+AGG + tig0000674:58884-58903 Msa1335750:intron 35.0%
AAAGAGATGAAGATGTTTGG+TGG + tig0000674:59025-59044 Msa1335750:intron 35.0%
AAGAGATGAAGATGTTTGGT+GGG + tig0000674:59026-59045 Msa1335750:intron 35.0%
GATAGCATTAAAGAGAGAGT+TGG + tig0000674:59079-59098 Msa1335750:intron 35.0%
TAGCATTAAAGAGAGAGTTG+GGG + tig0000674:59081-59100 Msa1335750:intron 35.0%
GAAACTAGGCTTAGATGATT+TGG + tig0000674:59131-59150 Msa1335750:intron 35.0%
! CTAGAGATTAATGAGTTGGA+TGG + tig0000674:59275-59294 Msa1335750:intron 35.0%
GTGTTGTCAATTGTAGATAG+CGG + tig0000674:59397-59416 Msa1335750:intron 35.0%
!! TTGTAGATAGCGGAAAATAC+TGG + tig0000674:59407-59426 Msa1335750:intron 35.0%
! ATCAGTGTTGTTAAATAGCG+CGG - tig0000674:59556-59575 None:intergenic 35.0%
! TTAATGTAGCTGTTACTTGC+TGG + tig0000674:59791-59810 Msa1335750:intron 35.0%
! AGTTGCTTTGTGTATGTCTT+AGG + tig0000674:59883-59902 Msa1335750:intron 35.0%
! GTTGCTTTGTGTATGTCTTA+GGG + tig0000674:59884-59903 Msa1335750:intron 35.0%
!!! GTATTGATTGATTTTGGTCC+TGG + tig0000674:59999-60018 Msa1335750:intron 35.0%
!! CAATTTTGTGGTGTTGAGTT+AGG + tig0000674:60311-60330 Msa1335750:intron 35.0%
GGAAGGGACAAAAGTAAATA+TGG + tig0000674:60698-60717 Msa1335750:intron 35.0%
AAGTAAATATGGGGTTATGG+AGG + tig0000674:60709-60728 Msa1335750:intron 35.0%
CTCTATGAACTCAAGGAATA+TGG + tig0000674:60816-60835 Msa1335750:intron 35.0%
!!! TGAGTATTGGAATGTTTTGC+AGG - tig0000674:60938-60957 None:intergenic 35.0%
! ACATAGTTTTCCTCCTATTC+AGG - tig0000674:61007-61026 None:intergenic 35.0%
CATAGCAATCATGGTAAACA+AGG - tig0000674:61040-61059 None:intergenic 35.0%
ATCACGCTTACATCAAATTG+GGG - tig0000674:61184-61203 None:intergenic 35.0%
TGCTAGTGGAAGCAAATATA+GGG - tig0000674:61219-61238 None:intergenic 35.0%
ATGCTAGTGGAAGCAAATAT+AGG - tig0000674:61220-61239 None:intergenic 35.0%
! TTCCACTAGCATTGAAGTTA+TGG + tig0000674:61228-61247 Msa1335750:intron 35.0%
TCTCATCCTTAGAGATAAAC+TGG + tig0000674:61379-61398 Msa1335750:intron 35.0%
! TAATGCAACTTTTGAACCTC+TGG - tig0000674:61407-61426 None:intergenic 35.0%
! CATGTATCCTTTTCAGAGAA+TGG - tig0000674:61549-61568 None:intergenic 35.0%
TAAAAGGTTATCCACCAACA+AGG - tig0000674:61755-61774 None:intergenic 35.0%
CATCTATTCTGAACTGGATT+TGG + tig0000674:61826-61845 Msa1335750:intron 35.0%
AAGTCCCAAATCAAACCATA+TGG + tig0000674:61857-61876 Msa1335750:intron 35.0%
AGTCCCAAATCAAACCATAT+GGG + tig0000674:61858-61877 Msa1335750:intron 35.0%
! ACTCCCATATGGTTTGATTT+GGG - tig0000674:61864-61883 None:intergenic 35.0%
ACAGTGGTGAATCTATGTTT+GGG - tig0000674:62027-62046 None:intergenic 35.0%
GAAAACGTGATGAATCACTT+CGG - tig0000674:62059-62078 None:intergenic 35.0%
! CACCTTTTTCTCATTGCTTA+TGG + tig0000674:62149-62168 Msa1335750:intron 35.0%
ACCCATAAGCAATGAGAAAA+AGG - tig0000674:62154-62173 None:intergenic 35.0%
CCTTTCACAAATCAGTAACA+CGG - tig0000674:62270-62289 None:intergenic 35.0%
AGCATGCCATATACATTTGT+TGG - tig0000674:62521-62540 None:intergenic 35.0%
AAATTATGAAAGATGGGAGG+GGG + tig0000674:62544-62563 Msa1335750:intron 35.0%
! CTTTTGGCGTTTACAAAGTA+AGG + tig0000674:62656-62675 Msa1335750:intron 35.0%
AGGAAAGGAAACAATGATAC+GGG - tig0000674:62736-62755 None:intergenic 35.0%
CAGGAAAGGAAACAATGATA+CGG - tig0000674:62737-62756 None:intergenic 35.0%
TAAAGGAATTGTGTCAGGAA+AGG - tig0000674:62751-62770 None:intergenic 35.0%
TTGTAAGTTGTAACACCCAA+AGG - tig0000674:62875-62894 None:intergenic 35.0%
ATCTCATTATTAGCTAACGG+GGG - tig0000674:63188-63207 None:intergenic 35.0%
CATCTCATTATTAGCTAACG+GGG - tig0000674:63189-63208 None:intergenic 35.0%
CCATCTCATTATTAGCTAAC+GGG - tig0000674:63190-63209 None:intergenic 35.0%
GCCATCTCATTATTAGCTAA+CGG - tig0000674:63191-63210 None:intergenic 35.0%
!! ATATTCAAAAGAGAGCATCG+TGG + tig0000674:63234-63253 Msa1335750:intron 35.0%
! CATGTCTAGAACCAAAATGA+AGG + tig0000674:63284-63303 Msa1335750:intron 35.0%
AAAAAACGAGGGTTCAAAGT+TGG + tig0000674:63309-63328 Msa1335750:intron 35.0%
AAAAACGAGGGTTCAAAGTT+GGG + tig0000674:63310-63329 Msa1335750:intron 35.0%
TGGTTTACATTTACAGTCAC+CGG + tig0000674:63336-63355 Msa1335750:intron 35.0%
CTCGTTCTAACGCAAAAATT+TGG - tig0000674:63498-63517 None:intergenic 35.0%
! CAAATTTTTGCGTTAGAACG+AGG + tig0000674:63496-63515 Msa1335750:intron 35.0%
AAATTGGCGCAAGGAAAAAT+TGG + tig0000674:63649-63668 Msa1335750:CDS 35.0%
! GAAGTTAAATTGGTTTCTGC+GGG + tig0000674:63674-63693 Msa1335750:CDS 35.0%
!! TAAAAGCTTTGGAGTCTGAT+TGG + tig0000674:63915-63934 Msa1335750:CDS 35.0%
!! AAAAGCTTTGGAGTCTGATT+GGG + tig0000674:63916-63935 Msa1335750:CDS 35.0%
TATCCAAAGGCCAATTTCTT+CGG - tig0000674:63951-63970 None:intergenic 35.0%
GAACATAATGACAAACCTGA+TGG + tig0000674:63992-64011 Msa1335750:CDS 35.0%
! GAGGATTTAGGTAATCGTTT+TGG + tig0000674:64019-64038 Msa1335750:intron 35.0%
CATATTCTAACACACGATAC+AGG - tig0000674:64124-64143 None:intergenic 35.0%
CTGTATCGTGTGTTAGAATA+TGG + tig0000674:64122-64141 Msa1335750:intron 35.0%
AATCAGCTGCACTATCTTTA+TGG - tig0000674:64658-64677 None:intergenic 35.0%
GAATGACATCCAAATTCTGA+CGG - tig0000674:64755-64774 None:intergenic 35.0%
TTCTATATAAAGGACCTGCT+TGG + tig0000674:64854-64873 Msa1335750:intron 35.0%
CCGGCCATCAAAAAAAAATA+AGG - tig0000674:64968-64987 None:intergenic 35.0%
TGCATAAAATATGCAAGGTC+CGG - tig0000674:65001-65020 None:intergenic 35.0%
GCCAATGCATAAAATATGCA+AGG - tig0000674:65006-65025 None:intergenic 35.0%
AAAAAAAAACACGGTCGTGA+AGG - tig0000674:65342-65361 None:intergenic 35.0%
CCAATAAGTGTATACTAGCT+AGG - tig0000674:65374-65393 None:intergenic 35.0%
CCTAGCTAGTATACACTTAT+TGG + tig0000674:65371-65390 Msa1335750:intron 35.0%
TCCAGCTAATACACTCTTAT+TGG + tig0000674:65403-65422 Msa1335750:intron 35.0%
! ACCAATAAGAGTGTATTAGC+TGG - tig0000674:65407-65426 None:intergenic 35.0%
CTTATTGGTATTCTGAATCC+AGG + tig0000674:65386-65405 Msa1335750:intron 35.0%
TGTGAATTTCGATACCATTC+GGG - tig0000674:65479-65498 None:intergenic 35.0%
ATAATAACCAGCACAGAATG+CGG + tig0000674:65556-65575 Msa1335750:three_prime_UTR 35.0%
AATAATCTACAAGGTAGCTC+CGG - tig0000674:65608-65627 None:intergenic 35.0%
GCTACCTTGTAGATTATTAC+AGG + tig0000674:65610-65629 Msa1335750:three_prime_UTR 35.0%
AGTGCCTGTAATAATCTACA+AGG - tig0000674:65617-65636 None:intergenic 35.0%
! GGGGAGTAAAGGAAATTTTT+CGG + tig0000674:65739-65758 Msa1335750:three_prime_UTR 35.0%
GGGGAAAAATCTGATGTTTA+AGG - tig0000674:65841-65860 None:intergenic 35.0%
CTCTATTACACATGTAGTTG+GGG - tig0000674:65860-65879 None:intergenic 35.0%
CTTTCTTTACGTAACTGATG+AGG + tig0000674:65934-65953 Msa1335750:three_prime_UTR 35.0%
! TTGTTGTTGTTGTCTGAGAG+TGG - tig0000674:57698-57717 None:intergenic 40.0%
!! GATTTGTTAGAGGTGGGTTA+AGG - tig0000674:57798-57817 None:intergenic 40.0%
!! ACCTAGGATTTGTTAGAGGT+GGG - tig0000674:57804-57823 None:intergenic 40.0%
!! AACCTAGGATTTGTTAGAGG+TGG - tig0000674:57805-57824 None:intergenic 40.0%
ATGAAAAGGGACAAGAACCT+AGG - tig0000674:57820-57839 None:intergenic 40.0%
AAAAGAATCAAGGGCAATGG+TGG + tig0000674:57922-57941 Msa1335750:five_prime_UTR 40.0%
TTATGATGGCAAGAAGTGAG+TGG + tig0000674:57963-57982 Msa1335750:exon 40.0%
TATGATGGCAAGAAGTGAGT+GGG + tig0000674:57964-57983 Msa1335750:exon 40.0%
GGGATTCAACTTCAATCAAG+AGG + tig0000674:57986-58005 Msa1335750:CDS 40.0%
ACGAAGACAATAGAGAGCAA+TGG - tig0000674:58074-58093 None:intergenic 40.0%
ACCAGATCAGATTCGGAAAA+TGG + tig0000674:58394-58413 Msa1335750:CDS 40.0%
! TCCATTTTCCGAATCTGATC+TGG - tig0000674:58398-58417 None:intergenic 40.0%
!! GGAGTTTTCAAGCCAAAGTA+CGG + tig0000674:58577-58596 Msa1335750:CDS 40.0%
! ATCTTCTGTTTCAAGTGCTG+AGG - tig0000674:58614-58633 None:intergenic 40.0%
!! AATAATGGATCTCACTCCCA+AGG + tig0000674:58680-58699 Msa1335750:CDS 40.0%
TCGATTTCATCTGTAGGAGA+TGG + tig0000674:58890-58909 Msa1335750:intron 40.0%
TGGTAAAATCGACAGTTCAC+TGG + tig0000674:58910-58929 Msa1335750:intron 40.0%
! AAGATGTTTGGTGGGATGTT+TGG + tig0000674:59034-59053 Msa1335750:intron 40.0%
!! GCTATCATTTTTATCCCGTC+TGG - tig0000674:59065-59084 None:intergenic 40.0%
AGCATTAAAGAGAGAGTTGG+GGG + tig0000674:59082-59101 Msa1335750:intron 40.0%
AGGAGAGTAGATCAGATGTA+GGG + tig0000674:59188-59207 Msa1335750:intron 40.0%
TAGGGTAGTCAAATCACTAG+AGG + tig0000674:59206-59225 Msa1335750:intron 40.0%
! CAAGTCTTATCCCACTAAGT+CGG - tig0000674:59353-59372 None:intergenic 40.0%
! TAAGACTTGGTTGTCGTTGT+TGG + tig0000674:59364-59383 Msa1335750:intron 40.0%
!! AGAGAGGTGTTGAAACATAG+CGG - tig0000674:59531-59550 None:intergenic 40.0%
TTAATGTGACCATTGACCCT+TGG + tig0000674:59624-59643 Msa1335750:intron 40.0%
GAAAAAGTCCAATCCTCCAA+GGG - tig0000674:59643-59662 None:intergenic 40.0%
GATCAATGTGCTCTTAAGGA+CGG - tig0000674:59665-59684 None:intergenic 40.0%
AGAGTTGTCCTTATATGGCT+CGG + tig0000674:60269-60288 Msa1335750:intron 40.0%
! TCACCTCACGATCAATTTTG+TGG + tig0000674:60299-60318 Msa1335750:intron 40.0%
ACACCACAAAATTGATCGTG+AGG - tig0000674:60305-60324 None:intergenic 40.0%
! TCTGGAATGTGAACAAATGC+AGG - tig0000674:60459-60478 None:intergenic 40.0%
GATTTCAGCATGTCTCGAAT+TGG - tig0000674:60485-60504 None:intergenic 40.0%
TCGACTAGAGTCTAGAGATA+TGG + tig0000674:60510-60529 Msa1335750:intron 40.0%
ACAAATGCAATCGTAAGGTG+CGG - tig0000674:60565-60584 None:intergenic 40.0%
CACCTTACGATTGCATTTGT+GGG + tig0000674:60565-60584 Msa1335750:intron 40.0%
ACCTTACGATTGCATTTGTG+GGG + tig0000674:60566-60585 Msa1335750:intron 40.0%
TCAAGGAATATGGAGAGAGA+GGG + tig0000674:60826-60845 Msa1335750:intron 40.0%
GGCAATGGTTGATCAATTGA+AGG + tig0000674:60847-60866 Msa1335750:intron 40.0%
ACTTCGGAATAGGATGATGA+CGG + tig0000674:60906-60925 Msa1335750:intron 40.0%
AGAATGAGATGCACCTGAAT+AGG + tig0000674:60991-61010 Msa1335750:intron 40.0%
ATACAACTATCTTGGGCTTG+AGG + tig0000674:61086-61105 Msa1335750:intron 40.0%
! ACTCCCATGTGGTTTGATTT+GGG + tig0000674:61122-61141 Msa1335750:intron 40.0%
!! TGGTTTGATTTGGGCCTTTA+GGG + tig0000674:61131-61150 Msa1335750:intron 40.0%
! CATCTATTCTGGACTAGATC+TGG - tig0000674:61160-61179 None:intergenic 40.0%
TCACGCTTACATCAAATTGG+GGG - tig0000674:61183-61202 None:intergenic 40.0%
TGCCATAACTTCAATGCTAG+TGG - tig0000674:61233-61252 None:intergenic 40.0%
AGCTTCAACTTGTGTGATGT+AGG - tig0000674:61262-61281 None:intergenic 40.0%
!!! TCTCATGCTTTTGAGGTAAG+GGG - tig0000674:61578-61597 None:intergenic 40.0%
!!! GTCTCATGCTTTTGAGGTAA+GGG - tig0000674:61579-61598 None:intergenic 40.0%
!!! TGTCTCATGCTTTTGAGGTA+AGG - tig0000674:61580-61599 None:intergenic 40.0%
! GATCTTGTCTCATGCTTTTG+AGG - tig0000674:61585-61604 None:intergenic 40.0%
GAGTTATCCAGTGGTCTATT+TGG - tig0000674:61652-61671 None:intergenic 40.0%
CACTGGATAACTCAACACAA+GGG + tig0000674:61659-61678 Msa1335750:intron 40.0%
ACTGGATAACTCAACACAAG+GGG + tig0000674:61660-61679 Msa1335750:intron 40.0%
TAGACCTTGAGTAACCTTGT+TGG + tig0000674:61738-61757 Msa1335750:intron 40.0%
AAGCAAGACTGGCATCTAAA+AGG - tig0000674:61771-61790 None:intergenic 40.0%
!! TGAGAGCATCTATTCTGAAC+TGG + tig0000674:61820-61839 Msa1335750:intron 40.0%
GACTCCCATATGGTTTGATT+TGG - tig0000674:61865-61884 None:intergenic 40.0%
TGGTGAATCTATGTTTGGGT+GGG - tig0000674:62023-62042 None:intergenic 40.0%
GACAGTGGTGAATCTATGTT+TGG - tig0000674:62028-62047 None:intergenic 40.0%
!! CACAGTGATGGATCAATGAA+AGG - tig0000674:62084-62103 None:intergenic 40.0%
GAGAGAGTAAATCACAGTGA+TGG - tig0000674:62096-62115 None:intergenic 40.0%
!! CCGTGTTACTGATTTGTGAA+AGG + tig0000674:62267-62286 Msa1335750:intron 40.0%
TGTTGAAATCCACACGCTAA+AGG - tig0000674:62768-62787 None:intergenic 40.0%
GAGTACAGCGATTATGAAAC+AGG - tig0000674:62797-62816 None:intergenic 40.0%
GTATCCACACAAACACCTTT+GGG + tig0000674:62857-62876 Msa1335750:intron 40.0%
! TTACTAGGAAAAGGCTTTGG+TGG - tig0000674:62907-62926 None:intergenic 40.0%
CACTTACTAGGAAAAGGCTT+TGG - tig0000674:62910-62929 None:intergenic 40.0%
CCCGTTAGCTAATAATGAGA+TGG + tig0000674:63187-63206 Msa1335750:intron 40.0%
! TTAAATTGGTTTCTGCGGGA+AGG + tig0000674:63678-63697 Msa1335750:CDS 40.0%
TTCGTGAGAAATGGTAGAGT+TGG - tig0000674:63708-63727 None:intergenic 40.0%
ATGAAGCTTGTGTGTTTGCA+TGG + tig0000674:63805-63824 Msa1335750:intron 40.0%
AGGGATGCTAGTAAAAGCTT+TGG + tig0000674:63904-63923 Msa1335750:intron 40.0%
TCTACATTCACAACCTCAAC+AGG - tig0000674:63974-63993 None:intergenic 40.0%
CTGTATCTGATCTCATCTAG+CGG + tig0000674:64053-64072 Msa1335750:intron 40.0%
TGTATCTGATCTCATCTAGC+GGG + tig0000674:64054-64073 Msa1335750:intron 40.0%
! CAAACGCACCCTAATTTTGA+TGG - tig0000674:64166-64185 None:intergenic 40.0%
ACACTTGAGTTCCTTGCATT+AGG + tig0000674:64321-64340 Msa1335750:intron 40.0%
! GATTAAGGGCCTGTTTGTTT+TGG - tig0000674:64508-64527 None:intergenic 40.0%
CTGTGTATACATTTCTCCAG+AGG + tig0000674:64538-64557 Msa1335750:intron 40.0%
TGTATACATTTCTCCAGAGG+AGG + tig0000674:64541-64560 Msa1335750:intron 40.0%
TACAGATTATGACGGTTCTG+CGG + tig0000674:64613-64632 Msa1335750:intron 40.0%
GTTTACTGTCCGTCAGAATT+TGG + tig0000674:64743-64762 Msa1335750:intron 40.0%
AGCACAAACATATGGAATGC+TGG + tig0000674:64789-64808 Msa1335750:intron 40.0%
TATAAAGGACCTGCTTGGAT+TGG + tig0000674:64859-64878 Msa1335750:intron 40.0%
GTAAATAAGCCAATCCAAGC+AGG - tig0000674:64871-64890 None:intergenic 40.0%
!! GCTTGGATTGGCTTATTTAC+TGG + tig0000674:64871-64890 Msa1335750:intron 40.0%
CATAAAATATGCAAGGTCCG+GGG - tig0000674:64999-65018 None:intergenic 40.0%
GCATAAAATATGCAAGGTCC+GGG - tig0000674:65000-65019 None:intergenic 40.0%
ATTGAGCTGTTTATCCAAGC+AGG + tig0000674:65246-65265 Msa1335750:intron 40.0%
! TTAAGCATTTTGGACCTGCT+TGG - tig0000674:65263-65282 None:intergenic 40.0%
!!! TTAGTTTTGGTTTCTCTGCC+TGG - tig0000674:65439-65458 None:intergenic 40.0%
TTAAGGATAGGTATCCCGAA+TGG + tig0000674:65462-65481 Msa1335750:CDS 40.0%
TAACACGAGCAATCTAAGTC+CGG + tig0000674:65586-65605 Msa1335750:three_prime_UTR 40.0%
TTAATGAGATGGGGGAGTAA+AGG + tig0000674:65728-65747 Msa1335750:three_prime_UTR 40.0%
AGATTCTTGGACGGTGTAAT+CGG + tig0000674:65884-65903 Msa1335750:three_prime_UTR 40.0%
TGTTGTTGTCTGAGAGTGGT+GGG - tig0000674:57694-57713 None:intergenic 45.0%
! TTGTTGTTGTCTGAGAGTGG+TGG - tig0000674:57695-57714 None:intergenic 45.0%
TGTGAATCGAAACGTGGGAT+TGG - tig0000674:57757-57776 None:intergenic 45.0%
!! AGAGGTGGGTTAAGGTTACT+GGG - tig0000674:57790-57809 None:intergenic 45.0%
!! TAGAGGTGGGTTAAGGTTAC+TGG - tig0000674:57791-57810 None:intergenic 45.0%
ACCCACCTCTAACAAATCCT+AGG + tig0000674:57800-57819 Msa1335750:five_prime_UTR 45.0%
ATGATGGCAAGAAGTGAGTG+GGG + tig0000674:57965-57984 Msa1335750:CDS 45.0%
CAACTTCAATCAAGAGGAGG+TGG + tig0000674:57992-58011 Msa1335750:CDS 45.0%
AATCAAGAGGAGGTGGAAAG+TGG + tig0000674:57999-58018 Msa1335750:CDS 45.0%
ATCAAGAGGAGGTGGAAAGT+GGG + tig0000674:58000-58019 Msa1335750:CDS 45.0%
!! GTTTTCAAGCCAAAGTACGG+AGG + tig0000674:58580-58599 Msa1335750:CDS 45.0%
GCATGTAGAGAGAACACCTA+TGG + tig0000674:59154-59173 Msa1335750:intron 45.0%
CACCTATGGATACTCTAGTC+AGG + tig0000674:59168-59187 Msa1335750:intron 45.0%
! CTCCTGACTAGAGTATCCAT+AGG - tig0000674:59173-59192 None:intergenic 45.0%
CAGGAGAGTAGATCAGATGT+AGG + tig0000674:59187-59206 Msa1335750:intron 45.0%
AGTCAAATCACTAGAGGCAG+AGG + tig0000674:59212-59231 Msa1335750:intron 45.0%
CTTATCCCACTAAGTCGGAT+CGG - tig0000674:59348-59367 None:intergenic 45.0%
CGACTTAGTGGGATAAGACT+TGG + tig0000674:59351-59370 Msa1335750:intron 45.0%
TTGGTTGTCGTTGTTGGTGT+TGG + tig0000674:59370-59389 Msa1335750:intron 45.0%
ATAGTGGCTATAGCACTGCT+GGG - tig0000674:59451-59470 None:intergenic 45.0%
AATAGTGGCTATAGCACTGC+TGG - tig0000674:59452-59471 None:intergenic 45.0%
GGAAAAAGTCCAATCCTCCA+AGG - tig0000674:59644-59663 None:intergenic 45.0%
ATCAGTGCGCGGTAGAATAA+GGG - tig0000674:59695-59714 None:intergenic 45.0%
AATAACCATGGATCAGTGCG+CGG - tig0000674:59706-59725 None:intergenic 45.0%
! CGCACTGATCCATGGTTATT+AGG + tig0000674:59706-59725 Msa1335750:intron 45.0%
TGGCCAGAGTTGTCCTTATA+TGG + tig0000674:60264-60283 Msa1335750:intron 45.0%
GAGCCATATAAGGACAACTC+TGG - tig0000674:60270-60289 None:intergenic 45.0%
GAGTTGTCCTTATATGGCTC+GGG + tig0000674:60270-60289 Msa1335750:intron 45.0%
ATGACTACCCGAGCCATATA+AGG - tig0000674:60280-60299 None:intergenic 45.0%
AGGATTGGACGTTCAGAACA+TGG - tig0000674:60407-60426 None:intergenic 45.0%
TGAACGTCCAATCCTAAGTG+TGG + tig0000674:60412-60431 Msa1335750:intron 45.0%
GAACGTCCAATCCTAAGTGT+GGG + tig0000674:60413-60432 Msa1335750:intron 45.0%
AACGTCCAATCCTAAGTGTG+GGG + tig0000674:60414-60433 Msa1335750:intron 45.0%
!! TGTGGGGAGGTGTTGTTATT+GGG + tig0000674:60430-60449 Msa1335750:intron 45.0%
CATGTCTCGAATTGGACATC+TGG - tig0000674:60477-60496 None:intergenic 45.0%
GCACCTTACGATTGCATTTG+TGG + tig0000674:60564-60583 Msa1335750:intron 45.0%
ACCCCACAAATGCAATCGTA+AGG - tig0000674:60570-60589 None:intergenic 45.0%
CTCAAGGAATATGGAGAGAG+AGG + tig0000674:60825-60844 Msa1335750:intron 45.0%
AATATGGAGAGAGAGGGCAA+TGG + tig0000674:60832-60851 Msa1335750:intron 45.0%
TGAAGGATGAAACTGCACGA+TGG + tig0000674:60864-60883 Msa1335750:intron 45.0%
GCTGTGAATCACTTCGGAAT+AGG + tig0000674:60896-60915 Msa1335750:intron 45.0%
ATGAGATGCACCTGAATAGG+AGG + tig0000674:60994-61013 Msa1335750:intron 45.0%
GACTCCCATGTGGTTTGATT+TGG + tig0000674:61121-61140 Msa1335750:intron 45.0%
AGGCCCAAATCAAACCACAT+GGG - tig0000674:61128-61147 None:intergenic 45.0%
AAGGCCCAAATCAAACCACA+TGG - tig0000674:61129-61148 None:intergenic 45.0%
!! GTGGTTTGATTTGGGCCTTT+AGG + tig0000674:61130-61149 Msa1335750:intron 45.0%
! ACTAGATCTGGAGTCCCTAA+AGG - tig0000674:61148-61167 None:intergenic 45.0%
!! CAAATTGGGGGCATCTATTC+TGG - tig0000674:61171-61190 None:intergenic 45.0%
CTGGCTCCAGTTTATCTCTA+AGG - tig0000674:61388-61407 None:intergenic 45.0%
TAGAGATAAACTGGAGCCAG+AGG + tig0000674:61388-61407 Msa1335750:intron 45.0%
CATCTGCTCACTCTCTGATT+GGG + tig0000674:61500-61519 Msa1335750:intron 45.0%
ACTCTCTGATTGGGACTTCT+TGG + tig0000674:61509-61528 Msa1335750:intron 45.0%
GCTTCTTTCGACCTTGCATT+TGG + tig0000674:61610-61629 Msa1335750:intron 45.0%
TCGACCTTGCATTTGGTATG+TGG + tig0000674:61617-61636 Msa1335750:intron 45.0%
CGACCTTGCATTTGGTATGT+GGG + tig0000674:61618-61637 Msa1335750:intron 45.0%
CATTTGGTATGTGGGTCCAA+CGG + tig0000674:61626-61645 Msa1335750:intron 45.0%
CCTTGTGTTGAGTTATCCAG+TGG - tig0000674:61661-61680 None:intergenic 45.0%
CCACTGGATAACTCAACACA+AGG + tig0000674:61658-61677 Msa1335750:intron 45.0%
ATAACTCAACACAAGGGGCA+AGG + tig0000674:61665-61684 Msa1335750:intron 45.0%
ACCTTGAGTAACCTTGTTGG+TGG + tig0000674:61741-61760 Msa1335750:intron 45.0%
TCCACCAACAAGGTTACTCA+AGG - tig0000674:61745-61764 None:intergenic 45.0%
AGCTGACTGATAAGCAAGAC+TGG - tig0000674:61782-61801 None:intergenic 45.0%
ACATTAGGAGGACTCCCATA+TGG - tig0000674:61875-61894 None:intergenic 45.0%
ATATGGGAGTCCTCCTAATG+TGG + tig0000674:61874-61893 Msa1335750:intron 45.0%
TATGGGAGTCCTCCTAATGT+GGG + tig0000674:61875-61894 Msa1335750:intron 45.0%
TTGGACTTGAGTCCCACATT+AGG - tig0000674:61890-61909 None:intergenic 45.0%
GACACGTTACATAGCAACCA+TGG + tig0000674:61933-61952 Msa1335750:intron 45.0%
GTGGTGAATCTATGTTTGGG+TGG - tig0000674:62024-62043 None:intergenic 45.0%
TGAGCATTTGGACAGTTGTG+AGG - tig0000674:62247-62266 None:intergenic 45.0%
TCAGTAACACGGTGAGCATT+TGG - tig0000674:62259-62278 None:intergenic 45.0%
CACGCTAAAGGAATTGTGTC+AGG - tig0000674:62756-62775 None:intergenic 45.0%
GACACAATTCCTTTAGCGTG+TGG + tig0000674:62756-62775 Msa1335750:intron 45.0%
GGTATCCACACAAACACCTT+TGG + tig0000674:62856-62875 Msa1335750:intron 45.0%
!! AACACCCAAAGGTGTTTGTG+TGG - tig0000674:62864-62883 None:intergenic 45.0%
GAGAGACACGCTATAATGCA+AGG + tig0000674:63145-63164 Msa1335750:intron 45.0%
CATTATTAGCTAACGGGGGT+TGG - tig0000674:63184-63203 None:intergenic 45.0%
TTTAATGTCACTCACGCGTG+TGG + tig0000674:63472-63491 Msa1335750:intron 45.0%
AGCAGTTGAAAATTGGCGCA+AGG + tig0000674:63640-63659 Msa1335750:CDS 45.0%
CTCTACCATTTCTCACGAAG+AGG + tig0000674:63709-63728 Msa1335750:CDS 45.0%
!! TTGCCGAAGAAATTGGCCTT+TGG + tig0000674:63945-63964 Msa1335750:CDS 45.0%
CAACCTCAACAGGTATCCAA+AGG - tig0000674:63964-63983 None:intergenic 45.0%
GCGGGATAAGACATCTTGTT+TGG + tig0000674:64072-64091 Msa1335750:intron 45.0%
! TGAAGTTCAGGTTTGCACTC+AGG - tig0000674:64593-64612 None:intergenic 45.0%
! TGATTGCTGTCAAGCTTGCT+TGG + tig0000674:64673-64692 Msa1335750:CDS 45.0%
CTTCTTTGGCACGTTTAGCA+TGG - tig0000674:64700-64719 None:intergenic 45.0%
CATGCTAAACGTGCCAAAGA+AGG + tig0000674:64698-64717 Msa1335750:CDS 45.0%
! GAGCTTAGCTCAGTTGGTAT+GGG - tig0000674:65028-65047 None:intergenic 45.0%
! TGAGCTTAGCTCAGTTGGTA+TGG - tig0000674:65029-65048 None:intergenic 45.0%
TGCACCAGTGATTGTTCCAT+GGG + tig0000674:65505-65524 Msa1335750:CDS 45.0%
! GTCAAAGTGCGATTTTCGAC+AGG + tig0000674:65773-65792 Msa1335750:three_prime_UTR 45.0%
!!! TATTGAAATATTTTAAAATT+CGG + tig0000674:60160-60179 Msa1335750:intron 5.0%
!!! AAATTTTATATATAAACATT+GGG - tig0000674:63408-63427 None:intergenic 5.0%
!!! AAAATTTTATATATAAACAT+TGG - tig0000674:63409-63428 None:intergenic 5.0%
! GAGAGTGGTGGGATTTGGTT+TGG - tig0000674:57683-57702 None:intergenic 50.0%
! TGTCTGAGAGTGGTGGGATT+TGG - tig0000674:57688-57707 None:intergenic 50.0%
CCTCGTGTGAATCGAAACGT+GGG - tig0000674:57762-57781 None:intergenic 50.0%
ACCTCGTGTGAATCGAAACG+TGG - tig0000674:57763-57782 None:intergenic 50.0%
TGATGGCAAGAAGTGAGTGG+GGG + tig0000674:57966-57985 Msa1335750:CDS 50.0%
GCAACTCAACCTCCGTACTT+TGG - tig0000674:58592-58611 None:intergenic 50.0%
!! TCACTCCCAAGGCATTGCTA+TGG + tig0000674:58691-58710 Msa1335750:CDS 50.0%
TCGCTCCATAGCAATGCCTT+GGG - tig0000674:58699-58718 None:intergenic 50.0%
GGATGTTTGGCAAGACCAGA+CGG + tig0000674:59047-59066 Msa1335750:intron 50.0%
GATGTTTGGCAAGACCAGAC+GGG + tig0000674:59048-59067 Msa1335750:intron 50.0%
ACTAAGTCGGATCGGCTACA+TGG - tig0000674:59340-59359 None:intergenic 50.0%
ATGTAGCCGATCCGACTTAG+TGG + tig0000674:59339-59358 Msa1335750:intron 50.0%
TGTAGCCGATCCGACTTAGT+GGG + tig0000674:59340-59359 Msa1335750:intron 50.0%
GTTAAATAGCGCGGCTAGAG+AGG - tig0000674:59547-59566 None:intergenic 50.0%
ATGTGACCATTGACCCTTGG+AGG + tig0000674:59627-59646 Msa1335750:intron 50.0%
ACCATTGACCCTTGGAGGAT+TGG + tig0000674:59632-59651 Msa1335750:intron 50.0%
TCCAATCCTCCAAGGGTCAA+TGG - tig0000674:59636-59655 None:intergenic 50.0%
GATCAGTGCGCGGTAGAATA+AGG - tig0000674:59696-59715 None:intergenic 50.0%
! TGTAGCTGTTACTTGCTGGC+TGG + tig0000674:59795-59814 Msa1335750:intron 50.0%
AACAACACCTCCCCACACTT+AGG - tig0000674:60427-60446 None:intergenic 50.0%
!! GTGTGGGGAGGTGTTGTTAT+TGG + tig0000674:60429-60448 Msa1335750:intron 50.0%
!! TCGGAATAGGATGATGACGG+TGG + tig0000674:60909-60928 Msa1335750:intron 50.0%
GCATCTGCTCACTCTCTGAT+TGG + tig0000674:61499-61518 Msa1335750:intron 50.0%
CTCTGATTGGGACTTCTTGG+TGG + tig0000674:61512-61531 Msa1335750:intron 50.0%
GGACCCACATACCAAATGCA+AGG - tig0000674:61624-61643 None:intergenic 50.0%
GACTTGAGTCCCACATTAGG+AGG - tig0000674:61887-61906 None:intergenic 50.0%
GTGATGAATCACTTCGGCAG+AGG - tig0000674:62053-62072 None:intergenic 50.0%
ATGAAAGATGGGAGGGGGTT+TGG + tig0000674:62549-62568 Msa1335750:intron 50.0%
GAAGCTTCCATCTGGACTGT+TGG + tig0000674:62622-62641 Msa1335750:intron 50.0%
TATTAGCTAACGGGGGTTGG+TGG - tig0000674:63181-63200 None:intergenic 50.0%
GAGGGTTCAAAGTTGGGCAT+TGG + tig0000674:63316-63335 Msa1335750:intron 50.0%
ACCATTTCTCACGAAGAGGC+AGG + tig0000674:63713-63732 Msa1335750:CDS 50.0%
ACCTGCCTCTTCGTGAGAAA+TGG - tig0000674:63717-63736 None:intergenic 50.0%
TTCTCACGAAGAGGCAGGTA+TGG + tig0000674:63718-63737 Msa1335750:intron 50.0%
GAAGAGGCAGGTATGGAGTA+TGG + tig0000674:63725-63744 Msa1335750:intron 50.0%
GCTGTGCTTGCCGAAGAAAT+TGG + tig0000674:63938-63957 Msa1335750:CDS 50.0%
TGGCCTTTGGATACCTGTTG+AGG + tig0000674:63958-63977 Msa1335750:CDS 50.0%
! TGACAAACCTGATGGTGCAG+AGG + tig0000674:64000-64019 Msa1335750:CDS 50.0%
CCTAAATCCTCTGCACCATC+AGG - tig0000674:64010-64029 None:intergenic 50.0%
! CCTGATGGTGCAGAGGATTT+AGG + tig0000674:64007-64026 Msa1335750:CDS 50.0%
AGGTTTGCACTCAGGTGGAA+GGG - tig0000674:64585-64604 None:intergenic 50.0%
! AGTTCAGGTTTGCACTCAGG+TGG - tig0000674:64590-64609 None:intergenic 50.0%
ATGACGGTTCTGCGGTTAGA+TGG + tig0000674:64621-64640 Msa1335750:CDS 50.0%
TGACGGTTCTGCGGTTAGAT+GGG + tig0000674:64622-64641 Msa1335750:CDS 50.0%
GGAACAATCACTGGTGCAGA+TGG - tig0000674:65503-65522 None:intergenic 50.0%
CTGCACCAGTGATTGTTCCA+TGG + tig0000674:65504-65523 Msa1335750:CDS 50.0%
TCAAGCAGCAACAACTCCAG+AGG - tig0000674:65531-65550 None:intergenic 50.0%
AACCAGCACAGAATGCGGTA+TGG + tig0000674:65561-65580 Msa1335750:three_prime_UTR 50.0%
TACCATACCGCATTCTGTGC+TGG - tig0000674:65566-65585 None:intergenic 50.0%
! CAGGCACTCAAAGCTAGCTT+TGG + tig0000674:65629-65648 Msa1335750:three_prime_UTR 50.0%
TTCTTGGACGGTGTAATCGG+AGG + tig0000674:65887-65906 Msa1335750:three_prime_UTR 50.0%
CCCACGTTTCGATTCACACG+AGG + tig0000674:57759-57778 Msa1335750:five_prime_UTR 55.0%
CTCGCTCCATAGCAATGCCT+TGG - tig0000674:58700-58719 None:intergenic 55.0%
!! CAAGGCATTGCTATGGAGCG+AGG + tig0000674:58698-58717 Msa1335750:CDS 55.0%
! TTCTACCGCGCACTGATCCA+TGG + tig0000674:59698-59717 Msa1335750:intron 55.0%
GTCCAATCCTAAGTGTGGGG+AGG + tig0000674:60417-60436 Msa1335750:intron 55.0%
CACCTCCCCACACTTAGGAT+TGG - tig0000674:60422-60441 None:intergenic 55.0%
ACATGGGAGTCCCCTAGTGT+GGG - tig0000674:61112-61131 None:intergenic 55.0%
CCAGTGGTCTATTTGGCCGT+TGG - tig0000674:61645-61664 None:intergenic 55.0%
CCAACGGCCAAATAGACCAC+TGG + tig0000674:61642-61661 Msa1335750:intron 55.0%
ACTTCGGCAGAGGAAGACAG+TGG - tig0000674:62043-62062 None:intergenic 55.0%
GTCCAGTCGAAGCTTCCATC+TGG + tig0000674:62614-62633 Msa1335750:intron 55.0%
GTCCAGATGGAAGCTTCGAC+TGG - tig0000674:62619-62638 None:intergenic 55.0%
CCTGGAAGAACTTCCTCCTC+TGG - tig0000674:64557-64576 None:intergenic 55.0%
CCAGAGGAGGAAGTTCTTCC+AGG + tig0000674:64554-64573 Msa1335750:intron 55.0%
AGGAGGAAGTTCTTCCAGGC+AGG + tig0000674:64558-64577 Msa1335750:intron 55.0%
GGAGGAAGTTCTTCCAGGCA+GGG + tig0000674:64559-64578 Msa1335750:intron 55.0%
CAGGTTTGCACTCAGGTGGA+AGG - tig0000674:64586-64605 None:intergenic 55.0%
GACGGTTCTGCGGTTAGATG+GGG + tig0000674:64623-64642 Msa1335750:CDS 55.0%
CCTCGTGAGCTTAGCTCAGT+TGG - tig0000674:65034-65053 None:intergenic 55.0%
CCAACTGAGCTAAGCTCACG+AGG + tig0000674:65031-65050 Msa1335750:intron 55.0%
GAGGCCCATGGAACAATCAC+TGG - tig0000674:65512-65531 None:intergenic 55.0%
GTGATTGTTCCATGGGCCTC+TGG + tig0000674:65512-65531 Msa1335750:CDS 55.0%
TTGGGCTTGAGGCCCACACT+AGG + tig0000674:61097-61116 Msa1335750:intron 60.0%
TGGGCTTGAGGCCCACACTA+GGG + tig0000674:61098-61117 Msa1335750:intron 60.0%
CACATGGGAGTCCCCTAGTG+TGG - tig0000674:61113-61132 None:intergenic 60.0%
CACACTAGGGGACTCCCATG+TGG + tig0000674:61111-61130 Msa1335750:intron 60.0%
AAGGTCCGGGGTTCAAACCC+CGG - tig0000674:64987-65006 None:intergenic 60.0%
GCAACAACTCCAGAGGCCCA+TGG - tig0000674:65524-65543 None:intergenic 60.0%
GGGCTTGAGGCCCACACTAG+GGG + tig0000674:61099-61118 Msa1335750:intron 65.0%
GATGGCCGGGGTTTGAACCC+CGG + tig0000674:64979-64998 Msa1335750:intron 65.0%
TCAGGTGGAAGGGCCCTGCC+TGG - tig0000674:64575-64594 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
tig0000674 gene 57648 66074 57648 ID=Msa1335750;Name=Msa1335750
tig0000674 mRNA 57648 66074 57648 ID=Msa1335750-mRNA-1;Parent=Msa1335750;Name=Msa1335750-mRNA-1;_AED=0.15;_eAED=0.15;_QI=317|0.66|0.85|1|1|1|7|524|293
tig0000674 exon 57648 58142 57648 ID=Msa1335750-mRNA-1:exon:354;Parent=Msa1335750-mRNA-1
tig0000674 exon 58381 58469 58381 ID=Msa1335750-mRNA-1:exon:355;Parent=Msa1335750-mRNA-1
tig0000674 exon 58560 58719 58560 ID=Msa1335750-mRNA-1:exon:356;Parent=Msa1335750-mRNA-1
tig0000674 exon 63639 63734 63639 ID=Msa1335750-mRNA-1:exon:357;Parent=Msa1335750-mRNA-1
tig0000674 exon 63906 64028 63906 ID=Msa1335750-mRNA-1:exon:358;Parent=Msa1335750-mRNA-1
tig0000674 exon 64618 64742 64618 ID=Msa1335750-mRNA-1:exon:359;Parent=Msa1335750-mRNA-1
tig0000674 exon 65440 66074 65440 ID=Msa1335750-mRNA-1:exon:360;Parent=Msa1335750-mRNA-1
tig0000674 five_prime_UTR 57648 57964 57648 ID=Msa1335750-mRNA-1:five_prime_utr;Parent=Msa1335750-mRNA-1
tig0000674 CDS 57965 58142 57965 ID=Msa1335750-mRNA-1:cds;Parent=Msa1335750-mRNA-1
tig0000674 CDS 58381 58469 58381 ID=Msa1335750-mRNA-1:cds;Parent=Msa1335750-mRNA-1
tig0000674 CDS 58560 58719 58560 ID=Msa1335750-mRNA-1:cds;Parent=Msa1335750-mRNA-1
tig0000674 CDS 63639 63734 63639 ID=Msa1335750-mRNA-1:cds;Parent=Msa1335750-mRNA-1
tig0000674 CDS 63906 64028 63906 ID=Msa1335750-mRNA-1:cds;Parent=Msa1335750-mRNA-1
tig0000674 CDS 64618 64742 64618 ID=Msa1335750-mRNA-1:cds;Parent=Msa1335750-mRNA-1
tig0000674 CDS 65440 65550 65440 ID=Msa1335750-mRNA-1:cds;Parent=Msa1335750-mRNA-1
tig0000674 three_prime_UTR 65551 66074 65551 ID=Msa1335750-mRNA-1:three_prime_utr;Parent=Msa1335750-mRNA-1
Gene Sequence

>Msa1335750

ATGATGGCAAGAAGTGAGTGGGGGATTCAACTTCAATCAAGAGGAGGTGGAAAGTGGGTTTGTTCTTACAAAAAAATCACTATCTTAGTTTGTCTTTTCAACATTGCCATTGCTCTCTATTGTCTTCGTTCTCTTTATGCTTCTCTTTATATCTACTCTGGTAGTGTTTCAAGAAACATTGTGGTGTATAAACCAGATCAGATTCGGAAAATGGAAGAATCGAATCGAATTAGGAAGTCATACAAACCAGCGAAGTTAATGAAATTGGTGAAGGAATTAGAAGGGGAGTTTTCAAGCCAAAGTACGGAGGTTGAGTTGCCTCAGCACTTGAAACAGAAGATAATTGATGAGGTCTTGCAGAGACTAGTTAGTTTGAATAGCAGAAGCAATAATGGATCTCACTCCCAAGGCATTGCTATGGAGCGAGAAGCAGTTGAAAATTGGCGCAAGGAAAAATTGGAAGAAGTTAAATTGGTTTCTGCGGGAAGGATTTCCAACTCTACCATTTCTCACGAAGAGGCAGGGATGCTAGTAAAAGCTTTGGAGTCTGATTGGGCTGTGCTTGCCGAAGAAATTGGCCTTTGGATACCTGTTGAGGTTGTGAATGTAGAACATAATGACAAACCTGATGGTGCAGAGGATTTAGATTATGACGGTTCTGCGGTTAGATGGGGTCTTACTCACCATAAAGATAGTGCAGCTGATTGCTGTCAAGCTTGCTTGGACCATGCTAAACGTGCCAAAGAAGGTGAAAAAAAATGCAATATTTGGGCAGAGAAACCAAAACTAAATTTTAAGGATAGGTATCCCGAATGGTATCGAAATTCACATCCATCTGCACCAGTGATTGTTCCATGGGCCTCTGGAGTTGTTGCTGCTTGA
Protein sequence

>Msa1335750

MMARSEWGIQLQSRGGGKWVCSYKKITILVCLFNIAIALYCLRSLYASLYIYSGSVSRNIVVYKPDQIRKMEESNRIRKSYKPAKLMKLVKELEGEFSSQSTEVELPQHLKQKIIDEVLQRLVSLNSRSNNGSHSQGIAMEREAVENWRKEKLEEVKLVSAGRISNSTISHEEAGMLVKALESDWAVLAEEIGLWIPVEVVNVEHNDKPDGAEDLDYDGSAVRWGLTHHKDSAADCCQACLDHAKRAKEGEKKCNIWAEKPKLNFKDRYPEWYRNSHPSAPVIVPWASGVVAA*