AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0154440

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0154440 MtrunA17_Chr1g0164981 97.209 609 16 1 1 609 1 608 0.0 1220
Msa0154440 MtrunA17_Chr5g0444881 48.387 589 277 6 16 603 15 577 0.0 530
Msa0154440 MtrunA17_Chr6g0476051 51.252 519 236 7 15 530 15 519 7.72e-165 487
Msa0154440 MtrunA17_Chr1g0188201 46.140 544 267 6 15 551 14 538 2.15e-150 451
Msa0154440 MtrunA17_Chr8g0354131 40.878 592 301 6 15 596 13 565 6.19e-149 442
Msa0154440 MtrunA17_Chr3g0122591 40.000 565 306 10 1 552 1 545 7.64e-132 399
Msa0154440 MtrunA17_Chr7g0245851 42.801 507 276 3 12 518 364 856 4.98e-119 378
Msa0154440 MtrunA17_Chr8g0345241 35.795 528 293 9 2 516 1 495 2.01e-96 304
Msa0154440 MtrunA17_Chr4g0039561 53.846 52 24 0 27 78 146 197 1.97e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0154440 AT2G01910.1 67.099 617 184 8 1 608 1 607 0.0 796
Msa0154440 AT1G14690.1 65.309 614 191 9 1 606 1 600 0.0 793
Msa0154440 AT1G14690.2 65.309 614 191 9 1 606 1 600 0.0 793
Msa0154440 AT2G01910.2 68.056 576 166 7 41 608 1 566 0.0 754
Msa0154440 AT5G55230.3 46.734 597 288 9 16 606 15 587 4.07e-172 502
Msa0154440 AT5G55230.1 46.734 597 288 9 16 606 15 587 4.07e-172 502
Msa0154440 AT4G26760.1 46.115 592 282 9 16 603 15 573 6.82e-171 498
Msa0154440 AT5G55230.2 44.728 626 287 10 16 606 15 616 3.68e-166 488
Msa0154440 AT2G38720.1 43.031 574 292 6 20 593 12 550 1.66e-141 422
Msa0154440 AT5G51600.1 43.979 573 291 9 11 578 10 557 1.13e-136 415
Msa0154440 AT3G60840.1 42.095 506 279 4 13 517 12 504 7.32e-132 402
Msa0154440 AT1G27920.1 38.571 560 311 8 1 534 1 553 7.36e-128 387
Msa0154440 AT5G62250.2 40.070 569 304 8 12 567 5 549 5.17e-111 343
Msa0154440 AT5G62250.1 40.070 569 304 8 12 567 5 549 5.17e-111 343
Msa0154440 AT1G27920.2 39.036 415 243 5 1 412 1 408 3.03e-94 296

Find 156 sgRNAs with CRISPR-Local

Find 376 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACAGCAATACCTGGAATTT+TGG 0.152671 1_4:+18996543 None:intergenic
TTTCTTGTTTAACTCTTAAA+AGG 0.152871 1_4:-18999543 Msa0154440:five_prime_UTR
CATTCTCTCTGTGGTGTTCT+TGG 0.163659 1_4:-18997622 Msa0154440:CDS
AACTTAATTTCCTACAATTA+TGG 0.164503 1_4:+18995016 None:intergenic
GTGAGTGTAGAGTGTGAAAA+AGG 0.181044 1_4:-18999469 Msa0154440:five_prime_UTR
TAAGAAGAGGTTGGAGTTAG+AGG 0.227815 1_4:-18997053 Msa0154440:CDS
GTAGATCTTGCATCTTCTTT+TGG 0.235244 1_4:+18995801 None:intergenic
AATCAAAAGGAAGCCATATA+TGG 0.244001 1_4:-18995773 Msa0154440:CDS
TAGTGTTCAATATATATTAT+TGG 0.274900 1_4:-18994932 Msa0154440:three_prime_UTR
GGGAATGCTTAGATGTTTAT+AGG 0.276626 1_4:-18998422 Msa0154440:CDS
GGTACGTTTGGTGGAATTAT+TGG 0.281304 1_4:-18996283 Msa0154440:CDS
CTCTTCTTCTCTCTGTTGTC+TGG 0.295010 1_4:+18996245 None:intergenic
AAGTGCAAGTAGTGCTTATA+TGG 0.309402 1_4:+18999395 None:intergenic
TCAGGGGCAGTACTTGTATC+AGG 0.319336 1_4:+18997004 None:intergenic
TTGCTTGTGAAGAGGAAAAT+TGG 0.319572 1_4:-18996745 Msa0154440:CDS
AAGGTGAACGCTTTGGTTAA+AGG 0.326363 1_4:+18999646 None:intergenic
ATTCGAACTTTGGAATTTGA+TGG 0.329583 1_4:-18997327 Msa0154440:CDS
AGGTGAACGCTTTGGTTAAA+GGG 0.357433 1_4:+18999647 None:intergenic
ACTAGGTTTAGACCCATATA+TGG 0.358084 1_4:+18995760 None:intergenic
CAGCAAATATGGAACGATAT+TGG 0.368433 1_4:-18998489 Msa0154440:CDS
TGAGGACAGGAAATTAGCTT+TGG 0.374600 1_4:-18995209 Msa0154440:three_prime_UTR
TGACTATATGTGTGTGTTGT+GGG 0.377016 1_4:-18995133 Msa0154440:three_prime_UTR
TCTCTGTGGTGTTCTTGGAT+TGG 0.377879 1_4:-18997617 Msa0154440:CDS
TCACATCATCATTGACAGTA+TGG 0.380804 1_4:+18997903 None:intergenic
TCGCTAACCTATTCGAACTT+TGG 0.382162 1_4:-18997337 Msa0154440:CDS
ATTAATGCACTAGCTTTCTC+AGG 0.388767 1_4:+18996986 None:intergenic
GGCAAAGTATTGTATTGAAA+TGG 0.388997 1_4:+19000758 None:intergenic
TCAAATTCCAAAGTTCGAAT+AGG 0.392179 1_4:+18997330 None:intergenic
TGTTGCAATCTCAGCTTCCT+TGG 0.397291 1_4:+18998344 None:intergenic
ACCTGAGTCCCATGCAAACT+TGG 0.397911 1_4:+18997565 None:intergenic
TGTTGAAAGAGCGCCTCTTT+CGG 0.406114 1_4:+18997232 None:intergenic
TATGACATTGTATCTTCCTT+AGG 0.409479 1_4:+18995509 None:intergenic
TAATCTGAAACGTGCAGAAC+GGG 0.409668 1_4:-18996581 Msa0154440:CDS
TTAAACTTGGGGAGGGGACT+CGG 0.411081 1_4:+18995469 None:intergenic
CTTAGATGTTTATAGGAGAA+AGG 0.411141 1_4:-18998415 Msa0154440:CDS
GATGTACATCATCTACTGTT+TGG 0.412398 1_4:+18997587 None:intergenic
TACTGCACCTCTCAACTTTG+TGG 0.419511 1_4:-18995537 Msa0154440:CDS
AAGAAGAGTTAAGAAGGAAC+AGG 0.422329 1_4:+18999732 None:intergenic
TTGGGGAGGGGACTCGGGTT+CGG 0.422995 1_4:+18995475 None:intergenic
GGTGTTCTTGGATTGGATTT+CGG 0.424164 1_4:-18997610 Msa0154440:CDS
CTCAGCTTCCTTGGCTGCAA+GGG 0.426652 1_4:+18998353 None:intergenic
TTCTTCAATTCTTCGACCAA+TGG 0.430753 1_4:+18998004 None:intergenic
GTAACTATAACCAAAATTCC+AGG 0.440102 1_4:-18996553 Msa0154440:intron
AGATCTAAAGGTGAACGCTT+TGG 0.449667 1_4:+18999639 None:intergenic
CACACACCGCGCTCCTACTC+TGG 0.450439 1_4:-18995599 Msa0154440:CDS
TAAACTTGGGGAGGGGACTC+GGG 0.452043 1_4:+18995470 None:intergenic
GATAACACTCGGTACAGTGC+TGG 0.455300 1_4:-18996619 Msa0154440:CDS
CTTATATGGATACTAGTGAT+AGG 0.457710 1_4:+18999409 None:intergenic
GAGGACAGGAAATTAGCTTT+GGG 0.458226 1_4:-18995208 Msa0154440:three_prime_UTR
GGACAAAGACCGTATGTTGA+TGG 0.458837 1_4:-18998454 Msa0154440:CDS
GGAATTTATATAGATTAAGA+TGG 0.464460 1_4:-18998071 Msa0154440:intron
GCTAGTGCATTAATAGATTC+CGG 0.471570 1_4:-18996977 Msa0154440:intron
TCGTGGTCTTCAAAAGGAAA+AGG 0.471921 1_4:-18997807 Msa0154440:intron
ATCAAAAGGAAGCCATATAT+GGG 0.473492 1_4:-18995772 Msa0154440:CDS
ATGTCATATGTAGGTACGTT+TGG 0.473501 1_4:-18996295 Msa0154440:intron
TTGACTATATGTGTGTGTTG+TGG 0.475607 1_4:-18995134 Msa0154440:three_prime_UTR
GTAGAAGAGAAGTAACAGAT+AGG 0.475843 1_4:-18996784 Msa0154440:CDS
GCTTTGGGAAGTGTTGATAC+AGG 0.476414 1_4:-18995193 Msa0154440:three_prime_UTR
TCCTACTCTGGTCGTCATAA+CGG 0.476718 1_4:-18995587 Msa0154440:CDS
GATTATTATTTGTTAGAGCT+TGG 0.477830 1_4:+18999836 None:intergenic
CTTGGTGTATAATGTATAGT+TGG 0.479394 1_4:+18999854 None:intergenic
TTCTTTGCTCAAAGAACTTG+AGG 0.479736 1_4:-18999374 Msa0154440:intron
ACTATTCACAAGGTTTGCTC+TGG 0.480492 1_4:+18995296 None:intergenic
AAGATAAGCGGTGAGATTTG+TGG 0.481668 1_4:-18997929 Msa0154440:CDS
AACAACGGTTATCGTGCAAA+TGG 0.483810 1_4:-18995707 Msa0154440:CDS
GCTCTAACAAATAATAATCA+TGG 0.483870 1_4:-18999832 Msa0154440:five_prime_UTR
AGATCTACTCCTAAATCAAA+AGG 0.486123 1_4:-18995786 Msa0154440:CDS
TCATCAATCCCTTGCAGCCA+AGG 0.486920 1_4:-18998361 Msa0154440:CDS
GAATCAGAAATCACCGAAAG+AGG 0.488175 1_4:-18997245 Msa0154440:CDS
TTCTTGTTTAACTCTTAAAA+GGG 0.493783 1_4:-18999542 Msa0154440:five_prime_UTR
AGACCGTATGTTGATGGAGC+TGG 0.494507 1_4:-18998448 Msa0154440:CDS
ACAAACATTAACAGATCTAA+AGG 0.494720 1_4:+18999627 None:intergenic
TAAGAGAAGAAGAGTTAAGA+AGG 0.495250 1_4:+18999726 None:intergenic
AATGGCAACAGCGTCGGCTA+TGG 0.499985 1_4:-18995689 Msa0154440:CDS
TCCAAGTTTGCATGGGACTC+AGG 0.500735 1_4:-18997566 Msa0154440:CDS
GCATCTTCGTGGTCTTCAAA+AGG 0.503443 1_4:-18997813 Msa0154440:CDS
CAACTTTGTGGCTATACCTA+AGG 0.504876 1_4:-18995525 Msa0154440:CDS
GAATATCAAACGCATCTTCG+TGG 0.509015 1_4:-18997824 Msa0154440:CDS
CAATGTAGGAGCAGGTAAAG+AGG 0.523174 1_4:+19000737 None:intergenic
CTGTGAATAATGTTGGCCAT+TGG 0.523179 1_4:-18999436 Msa0154440:exon
AACAGCGTCGGCTATGGCAA+TGG 0.523571 1_4:-18995683 Msa0154440:CDS
ATTGAGTTCCGTCGAGGTGT+AGG 0.524668 1_4:+18995644 None:intergenic
TTTGCAGGCTTCGGCAGAAG+TGG 0.524852 1_4:-18997122 Msa0154440:intron
TCTCAGCTTCCTTGGCTGCA+AGG 0.526154 1_4:+18998352 None:intergenic
ACTCGTATTTAAGAAGAGGT+TGG 0.527106 1_4:-18997062 Msa0154440:CDS
TTCAACAGAGATAATAGAGA+AGG 0.529481 1_4:-18997216 Msa0154440:intron
GTATGTTGATGGAGCTGGAA+AGG 0.530574 1_4:-18998443 Msa0154440:CDS
AAGAACTCGTATTTAAGAAG+AGG 0.530652 1_4:-18997066 Msa0154440:CDS
AAGGAAATCTAGAGTACAGA+AGG 0.531486 1_4:-18997470 Msa0154440:intron
ACAGATTCTGTGAATAATGT+TGG 0.531627 1_4:-18999443 Msa0154440:exon
GGTGATGTGGTGATTAGAGC+TGG 0.532649 1_4:-18994833 Msa0154440:three_prime_UTR
GATGTACATCCAAGTTTGCA+TGG 0.533457 1_4:-18997574 Msa0154440:CDS
AATGTGTAAAGAGGCAATGT+AGG 0.533685 1_4:+19000723 None:intergenic
AGTGGGATAGCTGACATTTG+AGG 0.535818 1_4:-18995227 Msa0154440:three_prime_UTR
AAGAAGAGAAGAGACGACAG+AGG 0.537947 1_4:-18996230 Msa0154440:CDS
GCCAACACGACACTGACACT+TGG 0.540164 1_4:-18994901 Msa0154440:three_prime_UTR
GCTTGCATCTGTCACACCAT+TGG 0.541601 1_4:-18998020 Msa0154440:CDS
TATGTTGATGGAGCTGGAAA+GGG 0.541861 1_4:-18998442 Msa0154440:CDS
GATGTGAGTGTCAGCAGCAC+AGG 0.543972 1_4:-18997887 Msa0154440:CDS
TAAAGAGGCAATGTAGGAGC+AGG 0.546206 1_4:+19000729 None:intergenic
AAAATTATGTGTTGGTGATG+TGG 0.548072 1_4:-18994846 Msa0154440:three_prime_UTR
GATACAGGTAGGGACAGTTA+AGG 0.549200 1_4:-18995178 Msa0154440:three_prime_UTR
CATTGAATCACAAATAGTAA+AGG 0.552349 1_4:-18996825 Msa0154440:CDS
TCATATGTAGGTACGTTTGG+TGG 0.552696 1_4:-18996292 Msa0154440:intron
TATAAGCAAAACACTAGCAT+GGG 0.553893 1_4:-18996439 Msa0154440:CDS
CAACACTAATAGCTGCACTC+GGG 0.560451 1_4:-18998326 Msa0154440:CDS
ATAACACTCGGTACAGTGCT+GGG 0.566360 1_4:-18996618 Msa0154440:CDS
TTAATGCACTAGCTTTCTCA+GGG 0.568025 1_4:+18996987 None:intergenic
TTATAAGCAAAACACTAGCA+TGG 0.571122 1_4:-18996440 Msa0154440:CDS
TTCTCAAGTTAAAAGCAGAA+AGG 0.571810 1_4:-18997489 Msa0154440:CDS
GTCGGCTATGGCAATGGCAA+TGG 0.575373 1_4:-18995677 Msa0154440:CDS
GATAGCTGACATTTGAGGAC+AGG 0.575977 1_4:-18995222 Msa0154440:three_prime_UTR
TTTGAACTTAAACTTGGGGA+GGG 0.579865 1_4:+18995462 None:intergenic
CGTGCAAATGGCAACAGCGT+CGG 0.582083 1_4:-18995695 Msa0154440:CDS
GGGAAGTGTTGATACAGGTA+GGG 0.584185 1_4:-18995188 Msa0154440:three_prime_UTR
CAAGCAACATACTATTCACA+AGG 0.584516 1_4:+18995286 None:intergenic
GGAACATGATATGAGCTCTC+CGG 0.585065 1_4:-18998304 Msa0154440:intron
GAGTTCCGTCGAGGTGTAGG+AGG 0.590544 1_4:+18995647 None:intergenic
GCAACACTAATAGCTGCACT+CGG 0.600020 1_4:-18998327 Msa0154440:CDS
ATGAAAGCGTGCTTTGATGT+TGG 0.600513 1_4:+18998380 None:intergenic
TTTCCAGCTCCATCAACATA+CGG 0.601579 1_4:+18998445 None:intergenic
ATGTATGTGTATTTATAACA+CGG 0.602805 1_4:-18994977 Msa0154440:three_prime_UTR
ATTAGCAATAGCACATTGGA+AGG 0.604701 1_4:-18997526 Msa0154440:CDS
TGGGAAGTGTTGATACAGGT+AGG 0.605766 1_4:-18995189 Msa0154440:three_prime_UTR
AATGAGGTGCATTCTCTCTG+TGG 0.607233 1_4:-18997631 Msa0154440:CDS
TTGAACTTAAACTTGGGGAG+GGG 0.607474 1_4:+18995463 None:intergenic
ACTCGGTACAGTGCTGGGCG+AGG 0.608408 1_4:-18996613 Msa0154440:CDS
TAACAGATAGGATTGATAAG+TGG 0.615452 1_4:-18996772 Msa0154440:CDS
ATGTACATCCAAGTTTGCAT+GGG 0.615491 1_4:-18997573 Msa0154440:CDS
ATTGCAAGACTTTCTGAAGT+CGG 0.617924 1_4:+18997659 None:intergenic
ATGTTAGCTAATAGTTCACA+AGG 0.618604 1_4:+18996845 None:intergenic
CGATATTGGAGAGAGCGAGA+AGG 0.619852 1_4:-18998475 Msa0154440:CDS
GTGAGTGTCAGCAGCACAGG+TGG 0.627088 1_4:-18997884 Msa0154440:CDS
TAATATTAGCAATAGCACAT+TGG 0.628365 1_4:-18997530 Msa0154440:CDS
CTATGCCTCCTACACCTCGA+CGG 0.629673 1_4:-18995652 Msa0154440:CDS
AGCTTTAGAAAGACAAACAA+CGG 0.630355 1_4:-18995722 Msa0154440:CDS
AGAAGAGAAGAGACGACAGA+GGG 0.631005 1_4:-18996229 Msa0154440:intron
ACCAAGTGTCAGTGTCGTGT+TGG 0.632890 1_4:+18994900 None:intergenic
ACATGGACAGTGAGACTGAG+TGG 0.635850 1_4:-18995245 Msa0154440:three_prime_UTR
TTAATCTGAAACGTGCAGAA+CGG 0.636397 1_4:-18996582 Msa0154440:CDS
AGTCTTGCAATGTGTGAATG+AGG 0.639710 1_4:-18997647 Msa0154440:CDS
AACACTAATAGCTGCACTCG+GGG 0.641813 1_4:-18998325 Msa0154440:CDS
AAGTTTGCATGGGACTCAGG+TGG 0.643834 1_4:-18997563 Msa0154440:CDS
GTGGCTGTTTGCTTGTGAAG+AGG 0.648627 1_4:-18996753 Msa0154440:CDS
CATGGACAGTGAGACTGAGT+GGG 0.651814 1_4:-18995244 Msa0154440:three_prime_UTR
ACTAGTGATAGGACTTCCAA+TGG 0.653569 1_4:+18999420 None:intergenic
TCCGTTATGACGACCAGAGT+AGG 0.653657 1_4:+18995586 None:intergenic
GGGAATTTCAGGATAACACT+CGG 0.667546 1_4:-18996630 Msa0154440:intron
GGTATAGCCACAAAGTTGAG+AGG 0.671097 1_4:+18995530 None:intergenic
ACTCAGATAGAAAAGATAAG+CGG 0.674236 1_4:-18997941 Msa0154440:CDS
AATAAGCTGAGATATATACA+TGG 0.679152 1_4:-18995262 Msa0154440:three_prime_UTR
CCGCTCATTGAGTTCCGTCG+AGG 0.692714 1_4:+18995638 None:intergenic
TTATAGGAGAAAGGTTGACG+AGG 0.725409 1_4:-18998406 Msa0154440:CDS
TGACGACCAGAGTAGGAGCG+CGG 0.732672 1_4:+18995593 None:intergenic
CCTCGACGGAACTCAATGAG+CGG 0.735513 1_4:-18995638 Msa0154440:CDS
TAATGCACTAGCTTTCTCAG+GGG 0.766836 1_4:+18996988 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGTTTATATGATAAAATATT+AGG - chr1_4:18995241-18995260 Msa0154440:three_prime_UTR 10.0%
!! AATAAAAAGAAAAAAGAAAA+AGG + chr1_4:18995779-18995798 None:intergenic 10.0%
!!! AAAAGTACAATTAAAATATT+AGG + chr1_4:18998281-18998300 None:intergenic 10.0%
!! TATATTTAACAAATGAAAAT+TGG + chr1_4:19000251-19000270 None:intergenic 10.0%
!!! AAAAGATAATGGTATTTTTA+GGG + chr1_4:18995725-18995744 None:intergenic 15.0%
!!! AAAAAGATAATGGTATTTTT+AGG + chr1_4:18995726-18995745 None:intergenic 15.0%
!!! TTTTATTGTAAATTTTCATG+TGG - chr1_4:18996725-18996744 Msa0154440:intron 15.0%
!! AATTGAAAATTTCACTATAT+TGG - chr1_4:18996776-18996795 Msa0154440:CDS 15.0%
!!! TAAAAAATCAATTTTATGCA+TGG - chr1_4:18997414-18997433 Msa0154440:intron 15.0%
!! ATTATAACAAATAATAAGAC+TGG + chr1_4:18998244-18998263 None:intergenic 15.0%
!! ATTAACAATAGTAATTAAGT+TGG + chr1_4:18999806-18999825 None:intergenic 15.0%
!! TAGTGTTCAATATATATTAT+TGG - chr1_4:19000730-19000749 Msa0154440:five_prime_UTR 15.0%
!!! TTTTGAAACAAAGAAAAAAT+GGG + chr1_4:19000799-19000818 None:intergenic 15.0%
!!! TTTTTGAAACAAAGAAAAAA+TGG + chr1_4:19000800-19000819 None:intergenic 15.0%
!!! ATGTTTATTTTGTAACAAGT+TGG + chr1_4:18995204-18995223 None:intergenic 20.0%
!! GGTAAAACTTATATCAAAAT+AGG - chr1_4:18995262-18995281 Msa0154440:three_prime_UTR 20.0%
!! ATAAGCATGAAACAAATTAT+TGG - chr1_4:18995302-18995321 Msa0154440:three_prime_UTR 20.0%
!! TAAGCATGAAACAAATTATT+GGG - chr1_4:18995303-18995322 Msa0154440:three_prime_UTR 20.0%
!! AGTAATATTCATTATTCTTG+CGG - chr1_4:18995503-18995522 Msa0154440:CDS 20.0%
!! AAAGAAAAAAGAAAAAGGAA+GGG + chr1_4:18995774-18995793 None:intergenic 20.0%
!! AAAAGAAAAAAGAAAAAGGA+AGG + chr1_4:18995775-18995794 None:intergenic 20.0%
!!! TTTGTTTTGTTTCAAAACAA+TGG - chr1_4:18996053-18996072 Msa0154440:intron 20.0%
!!! TTTCTTGTTTAACTCTTAAA+AGG - chr1_4:18996119-18996138 Msa0154440:intron 20.0%
!!! TTCTTGTTTAACTCTTAAAA+GGG - chr1_4:18996120-18996139 Msa0154440:intron 20.0%
!!! TTCTTTTTTTCAAAATGATG+AGG - chr1_4:18996361-18996380 Msa0154440:intron 20.0%
!!! TGTAGGTTATTTTATTGTAA+GGG - chr1_4:18996608-18996627 Msa0154440:CDS 20.0%
!!! TTGGTTTTGTTAACAAATTT+TGG - chr1_4:18996795-18996814 Msa0154440:CDS 20.0%
!! AAAAAAGCGAATCAATAATA+TGG + chr1_4:18996998-18997017 None:intergenic 20.0%
!! GAAAATTCATGATAAAATGA+TGG - chr1_4:18997032-18997051 Msa0154440:CDS 20.0%
!! GAAGTAACAAATAAAGAAAA+AGG + chr1_4:18997114-18997133 None:intergenic 20.0%
!!! TACTTCAATTTTTTTACCTT+TGG - chr1_4:18997128-18997147 Msa0154440:intron 20.0%
!! TTGATGTATTAATATACTTG+AGG - chr1_4:18997547-18997566 Msa0154440:CDS 20.0%
!! GGAATTTATATAGATTAAGA+TGG - chr1_4:18997591-18997610 Msa0154440:CDS 20.0%
!! AAACATGGAAAATATATGAA+AGG + chr1_4:18998507-18998526 None:intergenic 20.0%
!! AAATGCTTATAGGAAAATAT+GGG + chr1_4:18999475-18999494 None:intergenic 20.0%
!! GTAATAAAATATACATAAGC+AGG + chr1_4:18999568-18999587 None:intergenic 20.0%
!!! AAATAAATTAAGGGTACAAA+AGG + chr1_4:18999681-18999700 None:intergenic 20.0%
!! TTACACAGGAAATAAATTAA+GGG + chr1_4:18999690-18999709 None:intergenic 20.0%
!! TTTACACAGGAAATAAATTA+AGG + chr1_4:18999691-18999710 None:intergenic 20.0%
!! AATTTATTTCCTGTGTAAAT+TGG - chr1_4:18999692-18999711 Msa0154440:five_prime_UTR 20.0%
!! ATATAGAAGTAATTATGCAT+TGG - chr1_4:18999779-18999798 Msa0154440:five_prime_UTR 20.0%
!! TAAGTTCAAAAAACCAAAAA+TGG - chr1_4:19000213-19000232 Msa0154440:intron 20.0%
!! TATATAGTTCTTTAGTCAAA+AGG - chr1_4:19000269-19000288 Msa0154440:intron 20.0%
!! ATATAGTTCTTTAGTCAAAA+GGG - chr1_4:19000270-19000289 Msa0154440:intron 20.0%
!!! TTATTTTGATCCATAATTGT+AGG - chr1_4:19000636-19000655 Msa0154440:intron 20.0%
!! AACTTAATTTCCTACAATTA+TGG + chr1_4:19000649-19000668 None:intergenic 20.0%
!! ATGTATGTGTATTTATAACA+CGG - chr1_4:19000685-19000704 Msa0154440:intron 20.0%
!! TTGTTTCAAAAATTATGTGT+TGG - chr1_4:19000808-19000827 Msa0154440:five_prime_UTR 20.0%
! AACAAATTATTGGGAAGTAA+AGG - chr1_4:18995312-18995331 Msa0154440:three_prime_UTR 25.0%
! TAAAGGAAACAAATTCATCA+CGG - chr1_4:18995329-18995348 Msa0154440:three_prime_UTR 25.0%
! TTATTCTTGAGCTATGTAAT+TGG - chr1_4:18995465-18995484 Msa0154440:exon 25.0%
! TATTCTTGAGCTATGTAATT+GGG - chr1_4:18995466-18995485 Msa0154440:exon 25.0%
!!! ATAATGGTATTTTTAGGGTT+TGG + chr1_4:18995720-18995739 None:intergenic 25.0%
! AGATGCAAAGAAAAAGATAA+TGG + chr1_4:18995736-18995755 None:intergenic 25.0%
!! GATTATTATTTGTTAGAGCT+TGG + chr1_4:18995829-18995848 None:intergenic 25.0%
! GCTCTAACAAATAATAATCA+TGG - chr1_4:18995830-18995849 Msa0154440:intron 25.0%
!!! AACAGGATTTGTTTGTTTTT+AGG + chr1_4:18995916-18995935 None:intergenic 25.0%
! TTTCAGAAAAAGAAAGTAAC+AGG + chr1_4:18995968-18995987 None:intergenic 25.0%
! ACAAACATTAACAGATCTAA+AGG + chr1_4:18996038-18996057 None:intergenic 25.0%
!! TTTTCAAAATGATGAGGTTT+TGG - chr1_4:18996367-18996386 Msa0154440:intron 25.0%
!!! TTTAAAAGAGAAAGCACTTA+TGG - chr1_4:18996573-18996592 Msa0154440:CDS 25.0%
!!! CTGTAGGTTATTTTATTGTA+AGG - chr1_4:18996607-18996626 Msa0154440:CDS 25.0%
!! TATTTTATTGTAAGGGAGAA+AGG - chr1_4:18996615-18996634 Msa0154440:CDS 25.0%
!! ATTTTATTGTAAGGGAGAAA+GGG - chr1_4:18996616-18996635 Msa0154440:CDS 25.0%
!!! AAAAATGACTTTTTCAACTC+AGG + chr1_4:18996670-18996689 None:intergenic 25.0%
! AGTTACCAATTCAGTTAATA+TGG - chr1_4:18996819-18996838 Msa0154440:CDS 25.0%
! GTTACCAATTCAGTTAATAT+GGG - chr1_4:18996820-18996839 Msa0154440:CDS 25.0%
! AAATCCCATATTAACTGAAT+TGG + chr1_4:18996827-18996846 None:intergenic 25.0%
! CAAGTCATTTATGTATTTAC+CGG + chr1_4:18997380-18997399 None:intergenic 25.0%
!! AAAATCAATTTTATGCATGG+TGG - chr1_4:18997417-18997436 Msa0154440:intron 25.0%
! AATACATCAAAAAGCTTACA+TGG + chr1_4:18997537-18997556 None:intergenic 25.0%
! TGAAGAAGAAAAAAGAAGAA+AGG - chr1_4:18997674-18997693 Msa0154440:intron 25.0%
! TAATATTAGCAATAGCACAT+TGG - chr1_4:18998132-18998151 Msa0154440:intron 25.0%
! TAAAATATTAGGCTAAAGAG+AGG + chr1_4:18998270-18998289 None:intergenic 25.0%
!!! CTTTTTAAAAATGCAGTTGA+AGG - chr1_4:18998296-18998315 Msa0154440:intron 25.0%
! ATGAAAGGAAAAAATGATGA+TGG + chr1_4:18998492-18998511 None:intergenic 25.0%
! CATTGAATCACAAATAGTAA+AGG - chr1_4:18998837-18998856 Msa0154440:intron 25.0%
!!! AAGACTTGTTTTCTATATGA+TGG - chr1_4:18999257-18999276 Msa0154440:intron 25.0%
!!! AGACTTGTTTTCTATATGAT+GGG - chr1_4:18999258-18999277 Msa0154440:intron 25.0%
! CAAATGCTTATAGGAAAATA+TGG + chr1_4:18999476-18999495 None:intergenic 25.0%
! AAAGAACAAAGATCAATTTG+AGG + chr1_4:18999507-18999526 None:intergenic 25.0%
! TGTTATAAACTACACTTACT+AGG + chr1_4:18999540-18999559 None:intergenic 25.0%
!!! TGTGACTTTTTCTTACAAAT+AGG + chr1_4:18999624-18999643 None:intergenic 25.0%
!!! GTGTAGAACATTTAATTTGA+TGG - chr1_4:18999714-18999733 Msa0154440:five_prime_UTR 25.0%
!!! CTAAAGCTGTTAGTTTTTTT+TGG + chr1_4:18999928-18999947 None:intergenic 25.0%
!!! GTTTTTTGAACTTAAACTTG+GGG + chr1_4:19000207-19000226 None:intergenic 25.0%
!!! GGTTTTTTGAACTTAAACTT+GGG + chr1_4:19000208-19000227 None:intergenic 25.0%
!!! TGGTTTTTTGAACTTAAACT+TGG + chr1_4:19000209-19000228 None:intergenic 25.0%
! TTCAAAAAACCAAAAATGGT+AGG - chr1_4:19000217-19000236 Msa0154440:intron 25.0%
! AATAAGCTGAGATATATACA+TGG - chr1_4:19000400-19000419 Msa0154440:intron 25.0%
!! GGCAAAGTATTGTATTGAAA+TGG + chr1_4:18994907-18994926 None:intergenic 30.0%
GCAAAAATGAATGTGTAAAG+AGG + chr1_4:18994951-18994970 None:intergenic 30.0%
TTAGCATCATCTTAACAACT+AGG - chr1_4:18994976-18994995 Msa0154440:three_prime_UTR 30.0%
TAGCATCATCTTAACAACTA+GGG - chr1_4:18994977-18994996 Msa0154440:three_prime_UTR 30.0%
AAAGGAAACAAATTCATCAC+GGG - chr1_4:18995330-18995349 Msa0154440:three_prime_UTR 30.0%
ATGAATTGAAAGAGATGGAA+AGG - chr1_4:18995355-18995374 Msa0154440:intron 30.0%
TATTCATTATTCTTGCGGTT+TGG - chr1_4:18995508-18995527 Msa0154440:CDS 30.0%
! CTTGGTGTATAATGTATAGT+TGG + chr1_4:18995811-18995830 None:intergenic 30.0%
! AATCATTTTCTCTCTCTAAC+AGG - chr1_4:18995854-18995873 Msa0154440:intron 30.0%
TAGGAGAGAGAAAAATGAAA+AGG + chr1_4:18995897-18995916 None:intergenic 30.0%
TAAGAGAAGAAGAGTTAAGA+AGG + chr1_4:18995939-18995958 None:intergenic 30.0%
!!! TCTTGAATTGTGTTGTTTTG+AGG - chr1_4:18996156-18996175 Msa0154440:intron 30.0%
ACAGATTCTGTGAATAATGT+TGG - chr1_4:18996219-18996238 Msa0154440:intron 30.0%
CTTATATGGATACTAGTGAT+AGG + chr1_4:18996256-18996275 None:intergenic 30.0%
GAGAAGAAACAAAACATCAT+TGG + chr1_4:18996527-18996546 None:intergenic 30.0%
!!! ATGATGTTTTGTTTCTTCTC+AGG - chr1_4:18996527-18996546 Msa0154440:intron 30.0%
!! AGAAAGCACTTATGGTTATA+GGG - chr1_4:18996581-18996600 Msa0154440:CDS 30.0%
! TTTTATTGTAAGGGAGAAAG+GGG - chr1_4:18996617-18996636 Msa0154440:CDS 30.0%
!!! TATGGGATTTTAGTTTGACT+TGG - chr1_4:18996837-18996856 Msa0154440:CDS 30.0%
TATGCAAAGTCTATCCTATT+TGG + chr1_4:18996920-18996939 None:intergenic 30.0%
TATAGAATGAGTCTCTTGAT+TGG - chr1_4:18996938-18996957 Msa0154440:intron 30.0%
AAATGAGATTTGTCAACCAA+AGG + chr1_4:18997147-18997166 None:intergenic 30.0%
CTTAGATGTTTATAGGAGAA+AGG - chr1_4:18997247-18997266 Msa0154440:CDS 30.0%
!! TCAATCTACCTATTTTGAGA+AGG - chr1_4:18997506-18997525 Msa0154440:CDS 30.0%
!! CAATCTACCTATTTTGAGAA+GGG - chr1_4:18997507-18997526 Msa0154440:CDS 30.0%
ACTCAGATAGAAAAGATAAG+CGG - chr1_4:18997721-18997740 Msa0154440:intron 30.0%
!!! TTCTGCTTTTAACTTGAGAA+TGG + chr1_4:18998173-18998192 None:intergenic 30.0%
TTCTCAAGTTAAAAGCAGAA+AGG - chr1_4:18998173-18998192 Msa0154440:intron 30.0%
ATAATAAGACTGGAGCTTAA+GGG + chr1_4:18998234-18998253 None:intergenic 30.0%
AATAATAAGACTGGAGCTTA+AGG + chr1_4:18998235-18998254 None:intergenic 30.0%
TCAAATTCCAAAGTTCGAAT+AGG + chr1_4:18998335-18998354 None:intergenic 30.0%
!! ATTCGAACTTTGGAATTTGA+TGG - chr1_4:18998335-18998354 Msa0154440:CDS 30.0%
TTCAACAGAGATAATAGAGA+AGG - chr1_4:18998446-18998465 Msa0154440:CDS 30.0%
AAGAACTCGTATTTAAGAAG+AGG - chr1_4:18998596-18998615 Msa0154440:intron 30.0%
AAATTCACGTTAATGCAACA+GGG + chr1_4:18998717-18998736 None:intergenic 30.0%
!!! GAATCCTCTATTTTTGATAC+AGG - chr1_4:18998784-18998803 Msa0154440:intron 30.0%
ATGTTAGCTAATAGTTCACA+AGG + chr1_4:18998820-18998839 None:intergenic 30.0%
TAACAGATAGGATTGATAAG+TGG - chr1_4:18998890-18998909 Msa0154440:intron 30.0%
GAGAGAATTACAAACTTACT+TGG + chr1_4:18998957-18998976 None:intergenic 30.0%
GTAACTATAACCAAAATTCC+AGG - chr1_4:18999109-18999128 Msa0154440:intron 30.0%
TGGAACTTTCAACAACAAAT+AGG + chr1_4:18999152-18999171 None:intergenic 30.0%
TTATAAGCAAAACACTAGCA+TGG - chr1_4:18999222-18999241 Msa0154440:intron 30.0%
TATAAGCAAAACACTAGCAT+GGG - chr1_4:18999223-18999242 Msa0154440:intron 30.0%
!! GACTTGTTTTCTATATGATG+GGG - chr1_4:18999259-18999278 Msa0154440:intron 30.0%
TGATTGTCAATGTCATATGT+AGG - chr1_4:18999358-18999377 Msa0154440:intron 30.0%
GACAAACAACAAATGCTTAT+AGG + chr1_4:18999485-18999504 None:intergenic 30.0%
! ATATTTTATTACTCCCCCTT+TGG - chr1_4:18999576-18999595 Msa0154440:five_prime_UTR 30.0%
AAAATTTCTGTCAGACCAAA+GGG + chr1_4:18999594-18999613 None:intergenic 30.0%
AAAAATTTCTGTCAGACCAA+AGG + chr1_4:18999595-18999614 None:intergenic 30.0%
!!! GGTCTGACAGAAATTTTTTT+TGG - chr1_4:18999597-18999616 Msa0154440:five_prime_UTR 30.0%
AGATCTACTCCTAAATCAAA+AGG - chr1_4:18999876-18999895 Msa0154440:five_prime_UTR 30.0%
!!! ATATGGCTTCCTTTTGATTT+AGG + chr1_4:18999888-18999907 None:intergenic 30.0%
AATCAAAAGGAAGCCATATA+TGG - chr1_4:18999889-18999908 Msa0154440:five_prime_UTR 30.0%
ATCAAAAGGAAGCCATATAT+GGG - chr1_4:18999890-18999909 Msa0154440:five_prime_UTR 30.0%
!!! CTGTTAGTTTTTTTTGGACT+AGG + chr1_4:18999922-18999941 None:intergenic 30.0%
!! AGCTTTAGAAAGACAAACAA+CGG - chr1_4:18999940-18999959 Msa0154440:five_prime_UTR 30.0%
TATGACATTGTATCTTCCTT+AGG + chr1_4:19000156-19000175 None:intergenic 30.0%
! GAAATACAACCTACCATTTT+TGG + chr1_4:19000229-19000248 None:intergenic 30.0%
!!! CTGGTTTTAACAATGTTTAC+AGG + chr1_4:19000350-19000369 None:intergenic 30.0%
!! AAAATTATGTGTTGGTGATG+TGG - chr1_4:19000816-19000835 Msa0154440:five_prime_UTR 30.0%
AATGTGTAAAGAGGCAATGT+AGG + chr1_4:18994942-18994961 None:intergenic 35.0%
AGCATCATCTTAACAACTAG+GGG - chr1_4:18994978-18994997 Msa0154440:three_prime_UTR 35.0%
! AGATAAAAAAGCATGCGGTT+TGG - chr1_4:18995054-18995073 Msa0154440:three_prime_UTR 35.0%
GGGAAATGAATTGAAAGAGA+TGG - chr1_4:18995350-18995369 Msa0154440:intron 35.0%
GGAATTAGAATTGAACCTGA+TGG - chr1_4:18995376-18995395 Msa0154440:intron 35.0%
! TTTTCCATTATTGCACCATC+AGG + chr1_4:18995394-18995413 None:intergenic 35.0%
!! ATTATTCTTGCGGTTTGGTT+TGG - chr1_4:18995513-18995532 Msa0154440:CDS 35.0%
!! ATTTGGATTGGTTTGGTTTG+CGG - chr1_4:18995643-18995662 Msa0154440:CDS 35.0%
!!! TTGGTTTGCGGTTTTTCTAT+TGG - chr1_4:18995655-18995674 Msa0154440:CDS 35.0%
!! TGGTTTGCGGTTTTTCTATT+GGG - chr1_4:18995656-18995675 Msa0154440:CDS 35.0%
!!! GTTTTTCTATTGGGTTGGTT+CGG - chr1_4:18995665-18995684 Msa0154440:CDS 35.0%
!! TTGGTTGGTGGTTGTTAATA+GGG + chr1_4:18995701-18995720 None:intergenic 35.0%
!! TTTGGTTGGTGGTTGTTAAT+AGG + chr1_4:18995702-18995721 None:intergenic 35.0%
!!! TATTTTTAGGGTTTGGTTGG+TGG + chr1_4:18995713-18995732 None:intergenic 35.0%
!!! TGGTATTTTTAGGGTTTGGT+TGG + chr1_4:18995716-18995735 None:intergenic 35.0%
AAGAAGAGTTAAGAAGGAAC+AGG + chr1_4:18995933-18995952 None:intergenic 35.0%
TGAGTGTAGAGTGTGAAAAA+GGG - chr1_4:18996194-18996213 Msa0154440:intron 35.0%
AAGTGCAAGTAGTGCTTATA+TGG + chr1_4:18996270-18996289 None:intergenic 35.0%
TTCTTTGCTCAAAGAACTTG+AGG - chr1_4:18996288-18996307 Msa0154440:intron 35.0%
!! GTTGATGATGATGAATAGTG+TGG - chr1_4:18996437-18996456 Msa0154440:CDS 35.0%
!! GAGAAAGCACTTATGGTTAT+AGG - chr1_4:18996580-18996599 Msa0154440:CDS 35.0%
!!! TCCTGTTGTTTTTGCCAAAT+AGG - chr1_4:18996903-18996922 Msa0154440:intron 35.0%
TCCTATTTGGCAAAAACAAC+AGG + chr1_4:18996907-18996926 None:intergenic 35.0%
! CATTTTGTGTGCAGCAAATA+TGG - chr1_4:18997162-18997181 Msa0154440:intron 35.0%
CAGCAAATATGGAACGATAT+TGG - chr1_4:18997173-18997192 Msa0154440:intron 35.0%
GGGAATGCTTAGATGTTTAT+AGG - chr1_4:18997240-18997259 Msa0154440:CDS 35.0%
CAAAACGCGCAAAATTATAG+AGG + chr1_4:18997460-18997479 None:intergenic 35.0%
! TGGTTTTCCCTTCTCAAAAT+AGG + chr1_4:18997517-18997536 None:intergenic 35.0%
!! CTTTCTGATCGATTTGTATG+TGG - chr1_4:18997570-18997589 Msa0154440:CDS 35.0%
TTCTTCAATTCTTCGACCAA+TGG + chr1_4:18997661-18997680 None:intergenic 35.0%
TCACATCATCATTGACAGTA+TGG + chr1_4:18997762-18997781 None:intergenic 35.0%
AATAAATGAACGCTCTTCGA+TGG - chr1_4:18997895-18997914 Msa0154440:CDS 35.0%
! TTTGTGCATTTTTCTGTGCT+TGG - chr1_4:18997962-18997981 Msa0154440:CDS 35.0%
!! ATTGCAAGACTTTCTGAAGT+CGG + chr1_4:18998006-18998025 None:intergenic 35.0%
GATGTACATCATCTACTGTT+TGG + chr1_4:18998078-18998097 None:intergenic 35.0%
ATGTACATCCAAGTTTGCAT+GGG - chr1_4:18998089-18998108 Msa0154440:intron 35.0%
ATTAGCAATAGCACATTGGA+AGG - chr1_4:18998136-18998155 Msa0154440:intron 35.0%
! AAGGAAATCTAGAGTACAGA+AGG - chr1_4:18998192-18998211 Msa0154440:intron 35.0%
! AAGAGAGAAACTCTTTTCTG+AGG - chr1_4:18998370-18998389 Msa0154440:CDS 35.0%
AAAGCACATTTCAGCAAACA+TGG + chr1_4:18998522-18998541 None:intergenic 35.0%
ACTCGTATTTAAGAAGAGGT+TGG - chr1_4:18998600-18998619 Msa0154440:intron 35.0%
!! TTAATGCACTAGCTTTCTCA+GGG + chr1_4:18998678-18998697 None:intergenic 35.0%
!! ATTAATGCACTAGCTTTCTC+AGG + chr1_4:18998679-18998698 None:intergenic 35.0%
GCTAGTGCATTAATAGATTC+CGG - chr1_4:18998685-18998704 Msa0154440:intron 35.0%
CAAATTCACGTTAATGCAAC+AGG + chr1_4:18998718-18998737 None:intergenic 35.0%
ATAGAGGATTCGATAGTATC+AGG + chr1_4:18998775-18998794 None:intergenic 35.0%
CAAGCCTGTATCAAAAATAG+AGG + chr1_4:18998791-18998810 None:intergenic 35.0%
!!! CTCTATTTTTGATACAGGCT+TGG - chr1_4:18998789-18998808 Msa0154440:intron 35.0%
GTAGAAGAGAAGTAACAGAT+AGG - chr1_4:18998878-18998897 Msa0154440:intron 35.0%
TTGCTTGTGAAGAGGAAAAT+TGG - chr1_4:18998917-18998936 Msa0154440:intron 35.0%
! TTAATCTGAAACGTGCAGAA+CGG - chr1_4:18999080-18999099 Msa0154440:intron 35.0%
! TTGTTGTTGAAAGTTCCAAG+TGG - chr1_4:18999154-18999173 Msa0154440:intron 35.0%
ATAAGATTGTCAACCATTGC+TGG + chr1_4:18999206-18999225 None:intergenic 35.0%
GTGAAAACCAGAAATAACCA+TGG + chr1_4:18999301-18999320 None:intergenic 35.0%
!!! CTTCGCAGAGTTATTTTTAG+CGG - chr1_4:18999324-18999343 Msa0154440:intron 35.0%
ATGTCATATGTAGGTACGTT+TGG - chr1_4:18999367-18999386 Msa0154440:intron 35.0%
ATAGGAAAATATGGGCAAAG+AGG + chr1_4:18999467-18999486 None:intergenic 35.0%
AAATTTCTGTCAGACCAAAG+GGG + chr1_4:18999593-18999612 None:intergenic 35.0%
TGTTCTACACCAATTTACAC+AGG + chr1_4:18999704-18999723 None:intergenic 35.0%
!!! GGTTTTCTGTTTTTGATCTC+AGG - chr1_4:18999837-18999856 Msa0154440:five_prime_UTR 35.0%
! GTAGATCTTGCATCTTCTTT+TGG + chr1_4:18999864-18999883 None:intergenic 35.0%
ACTAGGTTTAGACCCATATA+TGG + chr1_4:18999905-18999924 None:intergenic 35.0%
TTTGAACTTAAACTTGGGGA+GGG + chr1_4:19000203-19000222 None:intergenic 35.0%
! TTTTGAACTTAAACTTGGGG+AGG + chr1_4:19000204-19000223 None:intergenic 35.0%
CAAGCAACATACTATTCACA+AGG + chr1_4:19000379-19000398 None:intergenic 35.0%
TTGACTATATGTGTGTGTTG+TGG - chr1_4:19000528-19000547 Msa0154440:intron 35.0%
TGACTATATGTGTGTGTTGT+GGG - chr1_4:19000529-19000548 Msa0154440:intron 35.0%
!!! TGCTTTTTTATCTCGCGGTT+TGG + chr1_4:18995047-18995066 None:intergenic 40.0%
!! AAAAAGCATGCGGTTTGGTT+TGG - chr1_4:18995059-18995078 Msa0154440:three_prime_UTR 40.0%
!! TGGTTTGGTTTGGTTTGGTT+TGG + chr1_4:18995109-18995128 None:intergenic 40.0%
CAAACCAAACCAAACCAATG+CGG - chr1_4:18995112-18995131 Msa0154440:three_prime_UTR 40.0%
! TGAACCTGATGGTGCAATAA+TGG - chr1_4:18995387-18995406 Msa0154440:intron 40.0%
!!! GGTTTTTTGCGGTTTCGATT+TGG - chr1_4:18995626-18995645 Msa0154440:CDS 40.0%
!! TTTGCGGTTTCGATTTGGAT+TGG - chr1_4:18995631-18995650 Msa0154440:CDS 40.0%
!! GGTTTCGATTTGGATTGGTT+TGG - chr1_4:18995636-18995655 Msa0154440:CDS 40.0%
! TTGCGGTTTTTCTATTGGGT+TGG - chr1_4:18995660-18995679 Msa0154440:CDS 40.0%
!! TGGTTGGTGGTTGTTAATAG+GGG + chr1_4:18995700-18995719 None:intergenic 40.0%
AGGTGAACGCTTTGGTTAAA+GGG + chr1_4:18996018-18996037 None:intergenic 40.0%
AAGGTGAACGCTTTGGTTAA+AGG + chr1_4:18996019-18996038 None:intergenic 40.0%
AGATCTAAAGGTGAACGCTT+TGG + chr1_4:18996026-18996045 None:intergenic 40.0%
GTGAGTGTAGAGTGTGAAAA+AGG - chr1_4:18996193-18996212 Msa0154440:intron 40.0%
CTGTGAATAATGTTGGCCAT+TGG - chr1_4:18996226-18996245 Msa0154440:intron 40.0%
ACTAGTGATAGGACTTCCAA+TGG + chr1_4:18996245-18996264 None:intergenic 40.0%
TATGGTTATAGGGTCTCTGT+AGG - chr1_4:18996591-18996610 Msa0154440:CDS 40.0%
TTTCCAGCTCCATCAACATA+CGG + chr1_4:18997220-18997239 None:intergenic 40.0%
! TATGTTGATGGAGCTGGAAA+GGG - chr1_4:18997220-18997239 Msa0154440:CDS 40.0%
TTATAGGAGAAAGGTTGACG+AGG - chr1_4:18997256-18997275 Msa0154440:CDS 40.0%
! ATGAAAGCGTGCTTTGATGT+TGG + chr1_4:18997285-18997304 None:intergenic 40.0%
AAGATAAGCGGTGAGATTTG+TGG - chr1_4:18997733-18997752 Msa0154440:intron 40.0%
GAATATCAAACGCATCTTCG+TGG - chr1_4:18997838-18997857 Msa0154440:CDS 40.0%
TCGTGGTCTTCAAAAGGAAA+AGG - chr1_4:18997855-18997874 Msa0154440:CDS 40.0%
!!! GCTTGGTTTTTTCTTCCAGT+CGG - chr1_4:18997979-18997998 Msa0154440:CDS 40.0%
AGTCTTGCAATGTGTGAATG+AGG - chr1_4:18998015-18998034 Msa0154440:CDS 40.0%
! GGTGTTCTTGGATTGGATTT+CGG - chr1_4:18998052-18998071 Msa0154440:CDS 40.0%
GATGTACATCCAAGTTTGCA+TGG - chr1_4:18998088-18998107 Msa0154440:intron 40.0%
TCGCTAACCTATTCGAACTT+TGG - chr1_4:18998325-18998344 Msa0154440:CDS 40.0%
GAATCAGAAATCACCGAAAG+AGG - chr1_4:18998417-18998436 Msa0154440:CDS 40.0%
! TTGCTGAAATGTGCTTTTGC+AGG - chr1_4:18998525-18998544 Msa0154440:intron 40.0%
! AAATGTGCTTTTGCAGGCTT+CGG - chr1_4:18998531-18998550 Msa0154440:intron 40.0%
TAAGAAGAGGTTGGAGTTAG+AGG - chr1_4:18998609-18998628 Msa0154440:intron 40.0%
!! TAATGCACTAGCTTTCTCAG+GGG + chr1_4:18998677-18998696 None:intergenic 40.0%
TAATGCAACAGGGAACATAC+CGG + chr1_4:18998707-18998726 None:intergenic 40.0%
! CGTGCACTATGAAAGTATAC+AGG + chr1_4:18998979-18998998 None:intergenic 40.0%
! CATAGTGCACGTCGATTATT+TGG - chr1_4:18998988-18999007 Msa0154440:intron 40.0%
CTTGTTCTCTGACCTGATAT+GGG - chr1_4:18999011-18999030 Msa0154440:intron 40.0%
TTGTTCTCTGACCTGATATG+GGG - chr1_4:18999012-18999031 Msa0154440:intron 40.0%
ATCCTGAAATTCCCCATATC+AGG + chr1_4:18999026-18999045 None:intergenic 40.0%
GGGAATTTCAGGATAACACT+CGG - chr1_4:18999032-18999051 Msa0154440:intron 40.0%
! TAATCTGAAACGTGCAGAAC+GGG - chr1_4:18999081-18999100 Msa0154440:intron 40.0%
! GACAGCAATACCTGGAATTT+TGG + chr1_4:18999122-18999141 None:intergenic 40.0%
GCATTTATGACAGCAATACC+TGG + chr1_4:18999130-18999149 None:intergenic 40.0%
AGAGAACACACTGTCACTAT+AGG + chr1_4:18999181-18999200 None:intergenic 40.0%
! AAGTGGTCCATGGTTATTTC+TGG - chr1_4:18999291-18999310 Msa0154440:intron 40.0%
CGCTAAAAATAACTCTGCGA+AGG + chr1_4:18999326-18999345 None:intergenic 40.0%
TCATATGTAGGTACGTTTGG+TGG - chr1_4:18999370-18999389 Msa0154440:intron 40.0%
! GGTACGTTTGGTGGAATTAT+TGG - chr1_4:18999379-18999398 Msa0154440:CDS 40.0%
AATTTCTGTCAGACCAAAGG+GGG + chr1_4:18999592-18999611 None:intergenic 40.0%
ACCCTACTAGAGGTAGTAAA+AGG - chr1_4:18999745-18999764 Msa0154440:five_prime_UTR 40.0%
! CCCTTTTACTACCTCTAGTA+GGG + chr1_4:18999749-18999768 None:intergenic 40.0%
CCCTACTAGAGGTAGTAAAA+GGG - chr1_4:18999746-18999765 Msa0154440:five_prime_UTR 40.0%
! TCCCTTTTACTACCTCTAGT+AGG + chr1_4:18999750-18999769 None:intergenic 40.0%
AACAACGGTTATCGTGCAAA+TGG - chr1_4:18999955-18999974 Msa0154440:five_prime_UTR 40.0%
CAACTTTGTGGCTATACCTA+AGG - chr1_4:19000137-19000156 Msa0154440:intron 40.0%
TTGAACTTAAACTTGGGGAG+GGG + chr1_4:19000202-19000221 None:intergenic 40.0%
GATAATGACTCTACTTGTGC+AGG - chr1_4:19000308-19000327 Msa0154440:intron 40.0%
! ACTATTCACAAGGTTTGCTC+TGG + chr1_4:19000369-19000388 None:intergenic 40.0%
! TGAGGACAGGAAATTAGCTT+TGG - chr1_4:19000453-19000472 Msa0154440:intron 40.0%
!! GAGGACAGGAAATTAGCTTT+GGG - chr1_4:19000454-19000473 Msa0154440:intron 40.0%
CAATGTAGGAGCAGGTAAAG+AGG + chr1_4:18994928-18994947 None:intergenic 45.0%
TAAAGAGGCAATGTAGGAGC+AGG + chr1_4:18994936-18994955 None:intergenic 45.0%
!! TTAACAACTAGGGGTGTTCG+CGG - chr1_4:18994987-18995006 Msa0154440:three_prime_UTR 45.0%
!!! CCGCATGCTTTTTTATCTCG+CGG + chr1_4:18995052-18995071 None:intergenic 45.0%
! CCGCGAGATAAAAAAGCATG+CGG - chr1_4:18995049-18995068 Msa0154440:three_prime_UTR 45.0%
!! CGCATTGGTTTGGTTTGGTT+TGG + chr1_4:18995114-18995133 None:intergenic 45.0%
!! CAAACCGCATTGGTTTGGTT+TGG + chr1_4:18995119-18995138 None:intergenic 45.0%
CAAACCAAACCAATGCGGTT+TGG - chr1_4:18995117-18995136 Msa0154440:three_prime_UTR 45.0%
!! CAATCCAAACCGCATTGGTT+TGG + chr1_4:18995124-18995143 None:intergenic 45.0%
! CAAACCAATGCGGTTTGGAT+TGG - chr1_4:18995122-18995141 Msa0154440:three_prime_UTR 45.0%
!! CAATGCGGTTTGGATTGGTT+CGG - chr1_4:18995127-18995146 Msa0154440:three_prime_UTR 45.0%
!! TTGGATTGGTTCGGTTTGTG+CGG - chr1_4:18995136-18995155 Msa0154440:three_prime_UTR 45.0%
!! TCTTGCGGTTTGGTTTGGTT+TGG - chr1_4:18995518-18995537 Msa0154440:CDS 45.0%
!! CGGTTTGGTTTGGTTTGGTT+CGG - chr1_4:18995523-18995542 Msa0154440:CDS 45.0%
!! GCACTTGGTTCGGATGAATT+CGG + chr1_4:18995606-18995625 None:intergenic 45.0%
GAATTCATCCGAACCAAGTG+CGG - chr1_4:18995605-18995624 Msa0154440:CDS 45.0%
GCAAAAAACCGCACTTGGTT+CGG + chr1_4:18995616-18995635 None:intergenic 45.0%
!!! GAACCAAGTGCGGTTTTTTG+CGG - chr1_4:18995615-18995634 Msa0154440:CDS 45.0%
AAACCGCAAAAAACCGCACT+TGG + chr1_4:18995621-18995640 None:intergenic 45.0%
GGACAAAGACCGTATGTTGA+TGG - chr1_4:18997208-18997227 Msa0154440:intron 45.0%
! GTATGTTGATGGAGCTGGAA+AGG - chr1_4:18997219-18997238 Msa0154440:CDS 45.0%
TGTTGCAATCTCAGCTTCCT+TGG + chr1_4:18997321-18997340 None:intergenic 45.0%
GCAACACTAATAGCTGCACT+CGG - chr1_4:18997335-18997354 Msa0154440:CDS 45.0%
CAACACTAATAGCTGCACTC+GGG - chr1_4:18997336-18997355 Msa0154440:CDS 45.0%
AACACTAATAGCTGCACTCG+GGG - chr1_4:18997337-18997356 Msa0154440:CDS 45.0%
GGAACATGATATGAGCTCTC+CGG - chr1_4:18997358-18997377 Msa0154440:intron 45.0%
GCATCTTCGTGGTCTTCAAA+AGG - chr1_4:18997849-18997868 Msa0154440:CDS 45.0%
AATGAGGTGCATTCTCTCTG+TGG - chr1_4:18998031-18998050 Msa0154440:CDS 45.0%
CATTCTCTCTGTGGTGTTCT+TGG - chr1_4:18998040-18998059 Msa0154440:CDS 45.0%
TCTCTGTGGTGTTCTTGGAT+TGG - chr1_4:18998045-18998064 Msa0154440:CDS 45.0%
!! TGTTGAAAGAGCGCCTCTTT+CGG + chr1_4:18998433-18998452 None:intergenic 45.0%
GCTTGTTCTCTGACCTGATA+TGG - chr1_4:18999010-18999029 Msa0154440:intron 45.0%
GACCTGATATGGGGAATTTC+AGG - chr1_4:18999021-18999040 Msa0154440:intron 45.0%
ATAACACTCGGTACAGTGCT+GGG - chr1_4:18999044-18999063 Msa0154440:intron 45.0%
ACTGTCACTATAGGTCCACT+TGG + chr1_4:18999172-18999191 None:intergenic 45.0%
GTGTGTTCTCTTTCCAGCAA+TGG - chr1_4:18999190-18999209 Msa0154440:intron 45.0%
TGATGGGGTAAGCTTCAAAG+TGG - chr1_4:18999274-18999293 Msa0154440:intron 45.0%
GTAAGCTTCAAAGTGGTCCA+TGG - chr1_4:18999281-18999300 Msa0154440:intron 45.0%
CTCTTCTTCTCTCTGTTGTC+TGG + chr1_4:18999420-18999439 None:intergenic 45.0%
AAGAAGAGAAGAGACGACAG+AGG - chr1_4:18999432-18999451 Msa0154440:exon 45.0%
AGAAGAGAAGAGACGACAGA+GGG - chr1_4:18999433-18999452 Msa0154440:exon 45.0%
TCCTACTCTGGTCGTCATAA+CGG - chr1_4:19000075-19000094 Msa0154440:intron 45.0%
TACTGCACCTCTCAACTTTG+TGG - chr1_4:19000125-19000144 Msa0154440:intron 45.0%
GGTATAGCCACAAAGTTGAG+AGG + chr1_4:19000135-19000154 None:intergenic 45.0%
AGTGGGATAGCTGACATTTG+AGG - chr1_4:19000435-19000454 Msa0154440:intron 45.0%
GATAGCTGACATTTGAGGAC+AGG - chr1_4:19000440-19000459 Msa0154440:intron 45.0%
!! GCTTTGGGAAGTGTTGATAC+AGG - chr1_4:19000469-19000488 Msa0154440:intron 45.0%
!! TGGGAAGTGTTGATACAGGT+AGG - chr1_4:19000473-19000492 Msa0154440:intron 45.0%
!! GGGAAGTGTTGATACAGGTA+GGG - chr1_4:19000474-19000493 Msa0154440:intron 45.0%
GATACAGGTAGGGACAGTTA+AGG - chr1_4:19000484-19000503 Msa0154440:intron 45.0%
!! GCATGCGGTTTGGTTTGGTT+CGG - chr1_4:18995064-18995083 Msa0154440:three_prime_UTR 50.0%
CGAACCAATCCAAACCGCAT+TGG + chr1_4:18995129-18995148 None:intergenic 50.0%
! GACTTTTGCACTAAACCGCG+CGG + chr1_4:18995581-18995600 None:intergenic 50.0%
CGATATTGGAGAGAGCGAGA+AGG - chr1_4:18997187-18997206 Msa0154440:intron 50.0%
! AGACCGTATGTTGATGGAGC+TGG - chr1_4:18997214-18997233 Msa0154440:intron 50.0%
TCATCAATCCCTTGCAGCCA+AGG - chr1_4:18997301-18997320 Msa0154440:CDS 50.0%
GCTTGCATCTGTCACACCAT+TGG - chr1_4:18997642-18997661 Msa0154440:CDS 50.0%
TCCAAGTTTGCATGGGACTC+AGG - chr1_4:18998096-18998115 Msa0154440:intron 50.0%
ACCTGAGTCCCATGCAAACT+TGG + chr1_4:18998100-18998119 None:intergenic 50.0%
AAGTTTGCATGGGACTCAGG+TGG - chr1_4:18998099-18998118 Msa0154440:intron 50.0%
TCAGGGGCAGTACTTGTATC+AGG + chr1_4:18998661-18998680 None:intergenic 50.0%
GTGGCTGTTTGCTTGTGAAG+AGG - chr1_4:18998909-18998928 Msa0154440:intron 50.0%
GATAACACTCGGTACAGTGC+TGG - chr1_4:18999043-18999062 Msa0154440:intron 50.0%
GGCTGTCTTAACCCTACTAG+AGG - chr1_4:18999735-18999754 Msa0154440:five_prime_UTR 50.0%
ATTGAGTTCCGTCGAGGTGT+AGG + chr1_4:19000021-19000040 None:intergenic 50.0%
TCCGTTATGACGACCAGAGT+AGG + chr1_4:19000079-19000098 None:intergenic 50.0%
TTAAACTTGGGGAGGGGACT+CGG + chr1_4:19000196-19000215 None:intergenic 50.0%
ACATGGACAGTGAGACTGAG+TGG - chr1_4:19000417-19000436 Msa0154440:intron 50.0%
CATGGACAGTGAGACTGAGT+GGG - chr1_4:19000418-19000437 Msa0154440:intron 50.0%
ACCAAGTGTCAGTGTCGTGT+TGG + chr1_4:19000765-19000784 None:intergenic 50.0%
GGTGATGTGGTGATTAGAGC+TGG - chr1_4:19000829-19000848 Msa0154440:five_prime_UTR 50.0%
TTGCACTAAACCGCGCGGTT+CGG + chr1_4:18995576-18995595 None:intergenic 55.0%
CTCAGCTTCCTTGGCTGCAA+GGG + chr1_4:18997312-18997331 None:intergenic 55.0%
TCTCAGCTTCCTTGGCTGCA+AGG + chr1_4:18997313-18997332 None:intergenic 55.0%
GATGTGAGTGTCAGCAGCAC+AGG - chr1_4:18997775-18997794 Msa0154440:intron 55.0%
!! CTTTCTGAAGTCGGTCCGAC+TGG + chr1_4:18997997-18998016 None:intergenic 55.0%
TTTGCAGGCTTCGGCAGAAG+TGG - chr1_4:18998540-18998559 Msa0154440:intron 55.0%
CGTGCAAATGGCAACAGCGT+CGG - chr1_4:18999967-18999986 Msa0154440:intron 55.0%
!! AATGGCAACAGCGTCGGCTA+TGG - chr1_4:18999973-18999992 Msa0154440:intron 55.0%
!! AACAGCGTCGGCTATGGCAA+TGG - chr1_4:18999979-18999998 Msa0154440:intron 55.0%
GTCGGCTATGGCAATGGCAA+TGG - chr1_4:18999985-19000004 Msa0154440:intron 55.0%
CTATGCCTCCTACACCTCGA+CGG - chr1_4:19000010-19000029 Msa0154440:intron 55.0%
CCTCGACGGAACTCAATGAG+CGG - chr1_4:19000024-19000043 Msa0154440:intron 55.0%
TAAACTTGGGGAGGGGACTC+GGG + chr1_4:19000195-19000214 None:intergenic 55.0%
GCCAACACGACACTGACACT+TGG - chr1_4:19000761-19000780 Msa0154440:five_prime_UTR 55.0%
!! AACTAGGGGTGTTCGCGGTG+CGG - chr1_4:18994992-18995011 Msa0154440:three_prime_UTR 60.0%
!! GTTCGCGGTGCGGTTTGGTT+CGG - chr1_4:18995002-18995021 Msa0154440:three_prime_UTR 60.0%
!! CTAAACCGCGCGGTTCGGTT+CGG + chr1_4:18995571-18995590 None:intergenic 60.0%
GTGAGTGTCAGCAGCACAGG+TGG - chr1_4:18997778-18997797 Msa0154440:intron 60.0%
GAGTTCCGTCGAGGTGTAGG+AGG + chr1_4:19000018-19000037 None:intergenic 60.0%
CCGCTCATTGAGTTCCGTCG+AGG + chr1_4:19000027-19000046 None:intergenic 60.0%
TGACGACCAGAGTAGGAGCG+CGG + chr1_4:19000072-19000091 None:intergenic 60.0%
!! GCGCGGTTCGGTTCGGTTTG+CGG + chr1_4:18995564-18995583 None:intergenic 65.0%
GCAAACCGAACCGAACCGCG+CGG - chr1_4:18995563-18995582 Msa0154440:CDS 65.0%
! ACTCGGTACAGTGCTGGGCG+AGG - chr1_4:18999049-18999068 Msa0154440:intron 65.0%
CACACACCGCGCTCCTACTC+TGG - chr1_4:19000063-19000082 Msa0154440:intron 65.0%
TTGGGGAGGGGACTCGGGTT+CGG + chr1_4:19000190-19000209 None:intergenic 65.0%
! GGGGTGTTCGCGGTGCGGTT+TGG - chr1_4:18994997-18995016 Msa0154440:three_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 18994832 19000852 18994832 ID=Msa0154440;Name=Msa0154440
chr1_4 mRNA 18994832 19000852 18994832 ID=Msa0154440-mRNA-1;Parent=Msa0154440;Name=Msa0154440-mRNA-1;_AED=0.05;_eAED=0.05;_QI=687|1|1|1|0.83|0.69|13|542|609
chr1_4 exon 18994832 18995354 18994832 ID=Msa0154440-mRNA-1:exon:6982;Parent=Msa0154440-mRNA-1
chr1_4 exon 18995450 18995825 18995450 ID=Msa0154440-mRNA-1:exon:6981;Parent=Msa0154440-mRNA-1
chr1_4 exon 18996230 18996304 18996230 ID=Msa0154440-mRNA-1:exon:6980;Parent=Msa0154440-mRNA-1
chr1_4 exon 18996404 18996477 18996404 ID=Msa0154440-mRNA-1:exon:6979;Parent=Msa0154440-mRNA-1
chr1_4 exon 18996554 18996641 18996554 ID=Msa0154440-mRNA-1:exon:6978;Parent=Msa0154440-mRNA-1
chr1_4 exon 18996727 18996878 18996727 ID=Msa0154440-mRNA-1:exon:6977;Parent=Msa0154440-mRNA-1
chr1_4 exon 18996978 18997137 18996978 ID=Msa0154440-mRNA-1:exon:6976;Parent=Msa0154440-mRNA-1
chr1_4 exon 18997217 18997372 18997217 ID=Msa0154440-mRNA-1:exon:6975;Parent=Msa0154440-mRNA-1
chr1_4 exon 18997471 18997686 18997471 ID=Msa0154440-mRNA-1:exon:6974;Parent=Msa0154440-mRNA-1
chr1_4 exon 18997808 18998080 18997808 ID=Msa0154440-mRNA-1:exon:6973;Parent=Msa0154440-mRNA-1
chr1_4 exon 18998305 18998508 18998305 ID=Msa0154440-mRNA-1:exon:6972;Parent=Msa0154440-mRNA-1
chr1_4 exon 18999375 18999974 18999375 ID=Msa0154440-mRNA-1:exon:6971;Parent=Msa0154440-mRNA-1
chr1_4 exon 19000691 19000852 19000691 ID=Msa0154440-mRNA-1:exon:6970;Parent=Msa0154440-mRNA-1
chr1_4 five_prime_UTR 19000691 19000852 19000691 ID=Msa0154440-mRNA-1:five_prime_utr;Parent=Msa0154440-mRNA-1
chr1_4 five_prime_UTR 18999450 18999974 18999450 ID=Msa0154440-mRNA-1:five_prime_utr;Parent=Msa0154440-mRNA-1
chr1_4 CDS 18999375 18999449 18999375 ID=Msa0154440-mRNA-1:cds;Parent=Msa0154440-mRNA-1
chr1_4 CDS 18998305 18998508 18998305 ID=Msa0154440-mRNA-1:cds;Parent=Msa0154440-mRNA-1
chr1_4 CDS 18997808 18998080 18997808 ID=Msa0154440-mRNA-1:cds;Parent=Msa0154440-mRNA-1
chr1_4 CDS 18997471 18997686 18997471 ID=Msa0154440-mRNA-1:cds;Parent=Msa0154440-mRNA-1
chr1_4 CDS 18997217 18997372 18997217 ID=Msa0154440-mRNA-1:cds;Parent=Msa0154440-mRNA-1
chr1_4 CDS 18996978 18997137 18996978 ID=Msa0154440-mRNA-1:cds;Parent=Msa0154440-mRNA-1
chr1_4 CDS 18996727 18996878 18996727 ID=Msa0154440-mRNA-1:cds;Parent=Msa0154440-mRNA-1
chr1_4 CDS 18996554 18996641 18996554 ID=Msa0154440-mRNA-1:cds;Parent=Msa0154440-mRNA-1
chr1_4 CDS 18996404 18996477 18996404 ID=Msa0154440-mRNA-1:cds;Parent=Msa0154440-mRNA-1
chr1_4 CDS 18996230 18996304 18996230 ID=Msa0154440-mRNA-1:cds;Parent=Msa0154440-mRNA-1
chr1_4 CDS 18995469 18995825 18995469 ID=Msa0154440-mRNA-1:cds;Parent=Msa0154440-mRNA-1
chr1_4 three_prime_UTR 18995450 18995468 18995450 ID=Msa0154440-mRNA-1:three_prime_utr;Parent=Msa0154440-mRNA-1
chr1_4 three_prime_UTR 18994832 18995354 18994832 ID=Msa0154440-mRNA-1:three_prime_utr;Parent=Msa0154440-mRNA-1
Gene Sequence

>Msa0154440

ATGTTGGCCATTGGAAGTCCTATCACTAGTATCCATATAAGCACTACTTGCACTTCTTTGCTCAAAGAACTTGAGCAAATATGGAACGATATTGGAGAGAGCGAGAAGGACAAAGACCGTATGTTGATGGAGCTGGAAAGGGAATGCTTAGATGTTTATAGGAGAAAGGTTGACGAGGCTGCCAACATCAAAGCACGCTTTCATCAATCCCTTGCAGCCAAGGAAGCTGAGATTGCAACACTAATAGCTGCACTCGGGGAACATGATATGAGCTCTCCGATTAAGATGGAAAAGATATCTGCATCGCTGAAAGAGAAGCTTGCATCTGTCACACCATTGGTCGAAGAATTGAAGAAGAAAAAAGAAGAAAGGTTGAAACAGTTAGCAGATATTAAAACTCAGATAGAAAAGATAAGCGGTGAGATTTGTGGAATCCATACTGTCAATGATGATGTGAGTGTCAGCAGCACAGGTGGTGTAGACGAACAAGACTTGTCACTTAGAAGACTTAATGAATATCAAACGCATCTTCGTGGTCTTCAAAAGGAAAAGTCGGACCGACTTCAGAAAGTCTTGCAATGTGTGAATGAGGTGCATTCTCTCTGTGGTGTTCTTGGATTGGATTTCGGCCAAACAGTAGATGATGTACATCCAAGTTTGCATGGGACTCAGGTGGAACAATCGACTAATATTAGCAATAGCACATTGGAAGGTCTAGAGAAGACCATTCTCAAGTTAAAAGCAGAAAGGAAATCTAGAGTACAGAAGTTGAAGGACGTTGTCGCTAACCTATTCGAACTTTGGAATTTGATGGACACTTCAAAAGAAGAGAGAAACTCTTTTCTGAGGAATACTTCTATTGTCACAACTTCAGAATCAGAAATCACCGAAAGAGGCGCTCTTTCAACAGAGATAATAGAGAAGGCTTCGGCAGAAGTGGAAAGACTTGCTAAACTAAAAGCGAGTAGAATGAAAGAACTCGTATTTAAGAAGAGGTTGGAGTTAGAGGAAATATGTAGATTGACTCATATTGAACCTGATACAAGTACTGCCCCTGAGAAAGCTAGTGCATTAATAGATTCCGGCTTGGTTGATCCTTGTGAACTATTAGCTAACATTGAATCACAAATAGTAAAGGCAAAAGATGAAGCTTTGAGTAGAAGAGAAGTAACAGATAGGATTGATAAGTGGCTGTTTGCTTGTGAAGAGGAAAATTGGCTCGACGAATATAGCCAAGATAACACTCGGTACAGTGCTGGGCGAGGTGCTCACATTAATCTGAAACGTGCAGAACGGGCAAGAGTAACTATAACCAAAATTCCAGCAATGGTTGACAATCTTATAAGCAAAACACTAGCATGGGAAGATGAAAAGAAGACTTGTTTTCTATATGATGGGGTACGTTTGGTGGAATTATTGGATGATTACAAACTGACCAGACAACAGAGAGAAGAAGAGAAGAGACGACAGAGGGACCAAAAGAAGATGCAAGATCTACTCCTAAATCAAAAGGAAGCCATATATGGGTCTAAACCTAGTCCAAAAAAAACTAACAGCTTTAGAAAGACAAACAACGGTTATCGTGCAAATGGCAACAGCGTCGGCTATGGCAATGGCAATGGATCTATGCCTCCTACACCTCGACGGAACTCAATGAGCGGTACAACATCTGAACTACACACACCGCGCTCCTACTCTGGTCGTCATAACGGATACTTCAACGAAATGAGAAGATTGTCTACTGCACCTCTCAACTTTGTGGCTATACCTAAGGAAGATACAATGTCATATAGTTGCAGTTCCGAACCCGAGTCCCCTCCCCAAGTTTAA
Protein sequence

>Msa0154440

MLAIGSPITSIHISTTCTSLLKELEQIWNDIGESEKDKDRMLMELERECLDVYRRKVDEAANIKARFHQSLAAKEAEIATLIAALGEHDMSSPIKMEKISASLKEKLASVTPLVEELKKKKEERLKQLADIKTQIEKISGEICGIHTVNDDVSVSSTGGVDEQDLSLRRLNEYQTHLRGLQKEKSDRLQKVLQCVNEVHSLCGVLGLDFGQTVDDVHPSLHGTQVEQSTNISNSTLEGLEKTILKLKAERKSRVQKLKDVVANLFELWNLMDTSKEERNSFLRNTSIVTTSESEITERGALSTEIIEKASAEVERLAKLKASRMKELVFKKRLELEEICRLTHIEPDTSTAPEKASALIDSGLVDPCELLANIESQIVKAKDEALSRREVTDRIDKWLFACEEENWLDEYSQDNTRYSAGRGAHINLKRAERARVTITKIPAMVDNLISKTLAWEDEKKTCFLYDGVRLVELLDDYKLTRQQREEEKRRQRDQKKMQDLLLNQKEAIYGSKPSPKKTNSFRKTNNGYRANGNSVGYGNGNGSMPPTPRRNSMSGTTSELHTPRSYSGRHNGYFNEMRRLSTAPLNFVAIPKEDTMSYSCSSEPESPPQV*