AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0452710


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0452710 MtrunA17_Chr3g0097821 99.733 375 1 0 1 375 1 375 0.0 778
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0452710 AT2G31300.1 78.249 377 75 5 1 373 1 374 0.0 595
Msa0452710 AT2G30910.3 77.719 377 76 6 1 372 1 374 0.0 594
Msa0452710 AT2G30910.1 77.719 377 76 6 1 372 1 374 0.0 594
Msa0452710 AT2G30910.2 75.597 377 84 6 1 372 1 374 0.0 574
Msa0452710 AT2G31300.2 78.393 361 71 5 1 357 1 358 0.0 568

Find 112 sgRNAs with CRISPR-Local

Find 601 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAGAGACCAAAAGTGAATT+TGG 0.180831 3_3:+41799580 None:intergenic
AGTACATCTGATATGAAATT+TGG 0.233687 3_3:-41792836 Msa0452710:CDS
GTCGCGTTGTAGATTTAATT+TGG 0.254519 3_3:-41789834 Msa0452710:three_prime_UTR
CAGCATGATCAGGTAATATC+TGG 0.263285 3_3:-41796144 Msa0452710:CDS
GTCTCATATTCTATATGTTT+TGG 0.264007 3_3:-41789717 Msa0452710:three_prime_UTR
GGTTGGTTGGTTGGTTGGTT+GGG 0.282053 3_3:+41799477 None:intergenic
TATCAGTTCTCTGAAGCATT+TGG 0.292881 3_3:-41790376 Msa0452710:intron
AACATACCCAAATTCACTTT+TGG 0.297880 3_3:-41799587 Msa0452710:five_prime_UTR
CTTCAGTGACAAGTGTTTCA+TGG 0.301682 3_3:-41793975 Msa0452710:CDS
AATCACGGAACACGACATTC+TGG 0.316967 3_3:+41791996 None:intergenic
TTAATTTGGTTGTGAGGAAT+TGG 0.321207 3_3:-41789820 Msa0452710:three_prime_UTR
AACAAGGTTGGTTGGTTGGT+TGG 0.348811 3_3:+41799472 None:intergenic
AAGAATTGCTGTATGGGATT+TGG 0.350947 3_3:-41789935 Msa0452710:CDS
GTTTCTGAGAGAACGGTAAT+AGG 0.350950 3_3:-41791841 Msa0452710:CDS
TGATGTGGGTCCTTCTCCTT+TGG 0.364729 3_3:-41792020 Msa0452710:CDS
CGCAAGAATACCAACATTAT+CGG 0.368715 3_3:+41793948 None:intergenic
GTACCCATTCTGATCCTTCA+AGG 0.371878 3_3:+41795926 None:intergenic
TTTAGAGCCTCTCATATTCA+TGG 0.372749 3_3:-41789613 Msa0452710:three_prime_UTR
CTCTCATCATCTTGGACATT+CGG 0.378975 3_3:-41792483 Msa0452710:CDS
AGGTTGGTTGGTTGGTTGGT+TGG 0.380168 3_3:+41799476 None:intergenic
ATAGCATATACAAACAGTTT+TGG 0.380254 3_3:+41795289 None:intergenic
CTAGAAATTGAATATTGGTT+TGG 0.389879 3_3:-41789638 Msa0452710:three_prime_UTR
CTGCAGATGAAAGAGGAGTT+TGG 0.391042 3_3:-41791786 Msa0452710:intron
ATCAGTTCTCTGAAGCATTT+GGG 0.393609 3_3:-41790375 Msa0452710:intron
AGCTTGATCTCTCATCATCT+TGG 0.394251 3_3:-41792491 Msa0452710:CDS
ATGTGAACTTCATTATTGTT+TGG 0.396486 3_3:+41797274 None:intergenic
ATCGTTTCCCACACCATACT+TGG 0.404007 3_3:+41790336 None:intergenic
TTGTACCACAACGATCTTAA+GGG 0.408999 3_3:+41789562 None:intergenic
TTTGTACCACAACGATCTTA+AGG 0.419289 3_3:+41789561 None:intergenic
GAGAGACCAAAAGTGAATTT+GGG 0.419511 3_3:+41799581 None:intergenic
GTGCTGCTCTTTGTGTTCAA+TGG 0.424300 3_3:-41795876 Msa0452710:CDS
ATAGATTGGTCGAAGACAAA+TGG 0.455768 3_3:-41797249 Msa0452710:CDS
TGAAGTTCACATCTATAGAT+TGG 0.461455 3_3:-41797263 Msa0452710:CDS
GTATCATCTGGATCAAGATA+TGG 0.468909 3_3:-41791571 Msa0452710:CDS
TTCCCACACCATACTTGGAT+TGG 0.478929 3_3:+41790341 None:intergenic
AGGTAATATCTGGGATAGAC+TGG 0.489400 3_3:-41796134 Msa0452710:CDS
ATCATACCTCTTGGTGAGCA+TGG 0.490694 3_3:-41790109 Msa0452710:CDS
TGTGTTCAATGGAGTCCAAA+AGG 0.493426 3_3:-41795865 Msa0452710:intron
TGTAGTTCTATCATACCTCT+TGG 0.495135 3_3:-41790118 Msa0452710:intron
ATCACGGAACACGACATTCT+GGG 0.498335 3_3:+41791997 None:intergenic
ACACAGGCACTCACGAGTTC+CGG 0.498426 3_3:+41796073 None:intergenic
TAGATTGGTCGAAGACAAAT+GGG 0.500826 3_3:-41797248 Msa0452710:CDS
GGTGAACAAGGTTGGTTGGT+TGG 0.503055 3_3:+41799468 None:intergenic
AACAAGTTTGCAGTGGGAAG+TGG 0.503387 3_3:-41795314 Msa0452710:CDS
AAAGGTGCATGTTCTTCAAA+AGG 0.504464 3_3:-41797224 Msa0452710:intron
TTCACCAGATCTCACTCCGT+TGG 0.504549 3_3:-41799451 Msa0452710:five_prime_UTR
AATGCATCACTTGTCACGCT+TGG 0.505275 3_3:-41799377 Msa0452710:CDS
GAGCGGAAGACAGTATCATC+TGG 0.508128 3_3:-41791583 Msa0452710:CDS
ATTATGAGCAGGAAAACAAC+TGG 0.512153 3_3:-41795268 Msa0452710:intron
TGAGGAATTGGAAGTGGTCA+AGG 0.515676 3_3:-41789808 Msa0452710:three_prime_UTR
TGGATGGAAGAATTGCTGTA+TGG 0.522720 3_3:-41789942 Msa0452710:CDS
AATTTCATGCAATGAATCAC+TGG 0.522841 3_3:-41789685 Msa0452710:three_prime_UTR
GCAAGAATACCAACATTATC+GGG 0.523262 3_3:+41793949 None:intergenic
TACCAACTCTTGTTATCCTT+AGG 0.525803 3_3:-41795906 Msa0452710:CDS
AGAGTGGTTACTAGATTGAT+CGG 0.525825 3_3:+41799350 None:intergenic
TTGTATATGCTATTATGAGC+AGG 0.529086 3_3:-41795279 Msa0452710:CDS
AGATATGTCTGGAACCTTGA+AGG 0.529442 3_3:-41795940 Msa0452710:CDS
GGATGGAAGAATTGCTGTAT+GGG 0.529737 3_3:-41789941 Msa0452710:CDS
ATTATTTGTTTCTGAGAGAA+CGG 0.529928 3_3:-41791848 Msa0452710:CDS
CAATTTCTAGAAAATACCAT+TGG 0.530885 3_3:+41789651 None:intergenic
GAGCAGCACGGTTTAGCCTA+AGG 0.537294 3_3:+41795890 None:intergenic
CACTCACGAGTTCCGGTCGT+GGG 0.537342 3_3:+41796080 None:intergenic
GAACCTTGAAGGATCAGAAT+GGG 0.538758 3_3:-41795929 Msa0452710:CDS
GAAACCAACGGAGTGAGATC+TGG 0.539580 3_3:+41799447 None:intergenic
TACTCTGCACTTCCCATCCG+TGG 0.545713 3_3:+41792996 None:intergenic
ATGAGACTATGTCATCATAC+AGG 0.545906 3_3:+41789733 None:intergenic
TTTCTTACCTACATAAGCTA+GGG 0.545926 3_3:+41792434 None:intergenic
TGGTTGTGAGGAATTGGAAG+TGG 0.549209 3_3:-41789814 Msa0452710:three_prime_UTR
AGCCTAAGGATAACAAGAGT+TGG 0.549485 3_3:+41795904 None:intergenic
ATGGGATTTGGAAAATGAGC+AGG 0.551586 3_3:-41789923 Msa0452710:CDS
GTAGATTTAATTTGGTTGTG+AGG 0.554653 3_3:-41789826 Msa0452710:three_prime_UTR
GGTCGAAGACAAATGGGAAA+AGG 0.558159 3_3:-41797242 Msa0452710:CDS
GCAGAAAACAAGTTTGCAGT+GGG 0.561048 3_3:-41795320 Msa0452710:intron
ATCTGGTGAACAAGGTTGGT+TGG 0.561153 3_3:+41799464 None:intergenic
CCTGAAACTACAGGATTGGA+TGG 0.561224 3_3:-41789958 Msa0452710:intron
GAGTGGTTACTAGATTGATC+GGG 0.563409 3_3:+41799351 None:intergenic
GGCAGAAAACAAGTTTGCAG+TGG 0.567517 3_3:-41795321 Msa0452710:intron
GTATTCTGTGTTGAAACCAA+CGG 0.576313 3_3:+41799435 None:intergenic
GGAACCTTGAAGGATCAGAA+TGG 0.576474 3_3:-41795930 Msa0452710:CDS
GCACTCACGAGTTCCGGTCG+TGG 0.576792 3_3:+41796079 None:intergenic
AGCATGATCAGGTAATATCT+GGG 0.579626 3_3:-41796143 Msa0452710:CDS
TAGTTACTTCATCCCACGAC+CGG 0.580689 3_3:-41796092 Msa0452710:CDS
GGCCAATCCAAGTATGGTGT+GGG 0.581786 3_3:-41790343 Msa0452710:CDS
ACATTCTGGGCCAAAGGAGA+AGG 0.582007 3_3:+41792010 None:intergenic
AATAAGCTTATAATTCAAGA+AGG 0.583387 3_3:+41789899 None:intergenic
GAGAGAACGGTAATAGGTGT+GGG 0.585251 3_3:-41791835 Msa0452710:CDS
CTTGCGACAACATCCACGGA+TGG 0.586607 3_3:-41793009 Msa0452710:CDS
TGAGAGAACGGTAATAGGTG+TGG 0.589873 3_3:-41791836 Msa0452710:CDS
TGGATCAAGATATGGCTCAC+AGG 0.591647 3_3:-41791563 Msa0452710:intron
GGCAATACCCTAGCTTATGT+AGG 0.594026 3_3:-41792441 Msa0452710:intron
CAATTCCCTTAAGATCGTTG+TGG 0.597184 3_3:-41789567 None:intergenic
TGGCCAATCCAAGTATGGTG+TGG 0.598684 3_3:-41790344 Msa0452710:CDS
TTAAGGGAATTGAATATGAG+AGG 0.598892 3_3:+41789578 None:intergenic
ACTGGAAAATATATAACCAA+TGG 0.601287 3_3:-41789667 Msa0452710:three_prime_UTR
TTGCGACAACATCCACGGAT+GGG 0.605771 3_3:-41793008 Msa0452710:CDS
TAAGCTAGGGTATTGCCACT+TGG 0.608759 3_3:+41792447 None:intergenic
AACACGACATTCTGGGCCAA+AGG 0.611884 3_3:+41792004 None:intergenic
TCTTCTTGCGACAACATCCA+CGG 0.612313 3_3:-41793013 Msa0452710:CDS
GGAGTGAGATCTGGTGAACA+AGG 0.613891 3_3:+41799456 None:intergenic
ATCTGATATGAAATTTGGAG+AGG 0.617391 3_3:-41792831 Msa0452710:intron
AATGTATCCATGAATATGAG+AGG 0.623274 3_3:+41789606 None:intergenic
GTATGCAAGACAACAAGTAA+AGG 0.637743 3_3:+41799499 None:intergenic
GGGATATGATTGTAACCCAA+TGG 0.637775 3_3:-41791815 Msa0452710:CDS
CATCACGGAGAGGCAAATCA+CGG 0.642366 3_3:+41791981 None:intergenic
TTGTCAGGTATCTTGGAGAG+CGG 0.646625 3_3:-41791600 Msa0452710:CDS
CTTGGACATTCGGAGTCAAG+TGG 0.649894 3_3:-41792473 Msa0452710:CDS
ATTGAACACAAAGAGCAGCA+CGG 0.658833 3_3:+41795878 None:intergenic
AATGTTCCATGCTCACCAAG+AGG 0.660956 3_3:+41790103 None:intergenic
TGAGATCTGGTGAACAAGGT+TGG 0.661288 3_3:+41799460 None:intergenic
TGCTGACCCACATCACGGAG+AGG 0.674971 3_3:+41791971 None:intergenic
GTGAGCATGGAACATTGACA+AGG 0.696012 3_3:-41790096 Msa0452710:CDS
GGAGTCAAGTGGTCACCAAG+TGG 0.703568 3_3:-41792462 Msa0452710:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATAATTAATTATTATTTT+GGG + chr3_3:41791996-41792015 None:intergenic 0.0%
!! TAAAAATAAATAAATTATAT+AGG + chr3_3:41793670-41793689 None:intergenic 0.0%
!!! ATATAATTTATTTATTTTTA+CGG - chr3_3:41793670-41793689 Msa0452710:intron 0.0%
!! GAAAAAAAATTATGATAATA+TGG + chr3_3:41792906-41792925 None:intergenic 10.0%
!!! GAATTAAATTAACATTTTTA+TGG - chr3_3:41793372-41793391 Msa0452710:intron 10.0%
!! AAATAAATAAATTATATAGG+TGG + chr3_3:41793667-41793686 None:intergenic 10.0%
!! TTAAATAAACTAATATATGT+AGG - chr3_3:41794097-41794116 Msa0452710:intron 10.0%
!! TAAATAAACTAATATATGTA+GGG - chr3_3:41794098-41794117 Msa0452710:intron 10.0%
!!! TTTTTCAGAAAAAAATAATA+TGG - chr3_3:41794263-41794282 Msa0452710:intron 10.0%
!! AAATTTCAAAAAAAAATCAT+TGG - chr3_3:41795103-41795122 Msa0452710:intron 10.0%
!! AATTTCAAAAAAAAATCATT+GGG - chr3_3:41795104-41795123 Msa0452710:intron 10.0%
!!! ATAAGAATATATTTTGATAT+AGG + chr3_3:41795781-41795800 None:intergenic 10.0%
!! AAATGAATTAAAAAATTTGT+TGG - chr3_3:41795944-41795963 Msa0452710:intron 10.0%
!! TATTAAAATAGTACTATTAA+AGG - chr3_3:41796904-41796923 Msa0452710:intron 10.0%
!!! TTTTTAAAAAAGAATACAAA+CGG + chr3_3:41796992-41797011 None:intergenic 10.0%
!!! TTCTTTTTTAAAAATATTTG+GGG - chr3_3:41796998-41797017 Msa0452710:intron 10.0%
!!! GTTTTAGAAAGAAAAAAAAA+GGG + chr3_3:41791203-41791222 None:intergenic 15.0%
!!! AGTTTTAGAAAGAAAAAAAA+AGG + chr3_3:41791204-41791223 None:intergenic 15.0%
!!! TTTAGACTTTTATATATCAT+TGG - chr3_3:41791732-41791751 Msa0452710:intron 15.0%
!! ATATTTGAATAATTCATAAG+AGG + chr3_3:41791836-41791855 None:intergenic 15.0%
!! AACTTATGTCTTTAATATTT+GGG + chr3_3:41792230-41792249 None:intergenic 15.0%
!! AAACTTATGTCTTTAATATT+TGG + chr3_3:41792231-41792250 None:intergenic 15.0%
!! AAATTCAATCATGATAATAT+TGG + chr3_3:41792760-41792779 None:intergenic 15.0%
!!! TTATAATAAAGCTTCTATTT+TGG - chr3_3:41792956-41792975 Msa0452710:intron 15.0%
!! TCAAAATCAATAATGTATAA+AGG + chr3_3:41793178-41793197 None:intergenic 15.0%
!! AATGTTAATTTAATTCTAGA+AGG + chr3_3:41793368-41793387 None:intergenic 15.0%
!! GAAATATTAAGACAATTATT+TGG + chr3_3:41793703-41793722 None:intergenic 15.0%
!! AATAATGTAAACATATGAAA+TGG + chr3_3:41794826-41794845 None:intergenic 15.0%
!!! TTTTTCTTTTTTAAAGAAAC+AGG + chr3_3:41794913-41794932 None:intergenic 15.0%
!! TTTCAAAAATAGTAAAGTAT+CGG + chr3_3:41796032-41796051 None:intergenic 15.0%
!! AAAAATTTATTGATGCTATT+AGG - chr3_3:41796928-41796947 Msa0452710:intron 15.0%
!!! TTTTAAAAAAGAATACAAAC+GGG + chr3_3:41796991-41797010 None:intergenic 15.0%
!!! TCTTTTTTAAAAATATTTGG+GGG - chr3_3:41796999-41797018 Msa0452710:intron 15.0%
!! ATGAAATTATTTAGAGAAAA+TGG - chr3_3:41797987-41798006 Msa0452710:intron 15.0%
!! TGAAATTATTTAGAGAAAAT+GGG - chr3_3:41797988-41798007 Msa0452710:intron 15.0%
!! TAATCAATGGTTATAATATT+TGG - chr3_3:41798317-41798336 Msa0452710:intron 15.0%
!! CTTAAAATAAATATGAACTT+TGG + chr3_3:41798507-41798526 None:intergenic 15.0%
!!! AATGTTAAAAAGTTTTAAAC+AGG - chr3_3:41798551-41798570 Msa0452710:intron 15.0%
!! ATACTAACATAAAATATGAT+TGG + chr3_3:41798580-41798599 None:intergenic 15.0%
!!! TTTTTCTTTCTGTTAAATTA+AGG - chr3_3:41798735-41798754 Msa0452710:intron 15.0%
!! ATATATAATATAACCAACTA+TGG + chr3_3:41798947-41798966 None:intergenic 15.0%
!!! ATTTTCTAGAAATTGAATAT+TGG - chr3_3:41799528-41799547 Msa0452710:intron 15.0%
!! TTAATATTGTTGCTAATGTT+AGG - chr3_3:41790130-41790149 Msa0452710:intron 20.0%
!!! ATTGTTTCTATAAACTATCT+TGG - chr3_3:41790424-41790443 Msa0452710:intron 20.0%
!!! GTTTTTGTCTAATTTTCATT+AGG + chr3_3:41790453-41790472 None:intergenic 20.0%
!! TATAAAATAATCTGTAACAG+TGG - chr3_3:41790806-41790825 Msa0452710:intron 20.0%
!! AACATTACTTGTGAAATATT+TGG + chr3_3:41791028-41791047 None:intergenic 20.0%
!! TTAGTCTAAAAACAACTATT+TGG + chr3_3:41791429-41791448 None:intergenic 20.0%
!!! AACCTATTATTTTGCTAATT+GGG + chr3_3:41791503-41791522 None:intergenic 20.0%
!! AATTAACTTAAAAGTTCAGA+AGG - chr3_3:41792151-41792170 Msa0452710:intron 20.0%
!! ACTTATGTCTTTAATATTTG+GGG + chr3_3:41792229-41792248 None:intergenic 20.0%
!! TAATGATGAAACAACTAATT+TGG - chr3_3:41792802-41792821 Msa0452710:intron 20.0%
!! ATAATGTATAAAGGAGAAAT+TGG + chr3_3:41793169-41793188 None:intergenic 20.0%
!!! TTAATTTAATTCTAGAAGGT+CGG + chr3_3:41793364-41793383 None:intergenic 20.0%
!! TGTAATGTAAATGTAAATAC+TGG - chr3_3:41793589-41793608 Msa0452710:intron 20.0%
!! GTAATGTAAATGTAAATACT+GGG - chr3_3:41793590-41793609 Msa0452710:intron 20.0%
!! TAATGTAAATGTAAATACTG+GGG - chr3_3:41793591-41793610 Msa0452710:intron 20.0%
!! TAAAACCATATAACTTCTAA+AGG + chr3_3:41793808-41793827 None:intergenic 20.0%
!!! CCATTTTAAAAGATTAGTTT+GGG + chr3_3:41794159-41794178 None:intergenic 20.0%
!!! TCCATTTTAAAAGATTAGTT+TGG + chr3_3:41794160-41794179 None:intergenic 20.0%
!! ATTCTATTTATATCAACTAG+AGG + chr3_3:41795074-41795093 None:intergenic 20.0%
!!! GAATATATTTTGATATAGGT+AGG + chr3_3:41795777-41795796 None:intergenic 20.0%
!! TTTGTAGTTAAAATGATGTA+AGG - chr3_3:41795834-41795853 Msa0452710:intron 20.0%
!! AAAAAATATCAGACACATAT+AGG - chr3_3:41795986-41796005 Msa0452710:intron 20.0%
!! CGTTAAAATATATTTGATGT+CGG - chr3_3:41796088-41796107 Msa0452710:CDS 20.0%
!! ATCTTGAAAATAAAGAGAAA+AGG + chr3_3:41796264-41796283 None:intergenic 20.0%
!!! TCTTGTTTTGAACTTTTAAT+AGG - chr3_3:41796484-41796503 Msa0452710:intron 20.0%
!! AACATGAAAAAGAAACATAT+AGG + chr3_3:41796810-41796829 None:intergenic 20.0%
!!! ATATATTTTGTTGATGATGT+GGG - chr3_3:41797137-41797156 Msa0452710:intron 20.0%
!! GAAAATATCAGTAAATCATT+CGG + chr3_3:41797266-41797285 None:intergenic 20.0%
!!! AATGATTTACTGATATTTTC+TGG - chr3_3:41797266-41797285 Msa0452710:CDS 20.0%
!! GAAATTATTTAGAGAAAATG+GGG - chr3_3:41797989-41798008 Msa0452710:intron 20.0%
!! AAATTATTTAGAGAAAATGG+GGG - chr3_3:41797990-41798009 Msa0452710:intron 20.0%
!!! TTATCTATAAAGGTTTTTTC+AGG + chr3_3:41798300-41798319 None:intergenic 20.0%
!! AAACCTTTATAGATAATCAA+TGG - chr3_3:41798304-41798323 Msa0452710:intron 20.0%
!!! TAACCATTGATTATCTATAA+AGG + chr3_3:41798310-41798329 None:intergenic 20.0%
!! AATAAGCTTATAATTCAAGA+AGG + chr3_3:41799275-41799294 None:intergenic 20.0%
! TTCAACACAGAATACAAAAA+TGG - chr3_3:41789744-41789763 Msa0452710:three_prime_UTR 25.0%
! AAACAAGGTTTGAATCAAAA+AGG + chr3_3:41789857-41789876 None:intergenic 25.0%
! AAAAACAACGAAATCAAACA+AGG + chr3_3:41789872-41789891 None:intergenic 25.0%
! TTCTAGATGTAGTTATGATT+TGG - chr3_3:41789919-41789938 Msa0452710:CDS 25.0%
! CTACTTATAGACGTATTATA+AGG - chr3_3:41790472-41790491 Msa0452710:intron 25.0%
!! TAAGCTTTTGTAAATGTTTG+TGG - chr3_3:41790503-41790522 Msa0452710:intron 25.0%
! CTTGTGAAATATTTGGTATA+CGG + chr3_3:41791021-41791040 None:intergenic 25.0%
!! TTGCGTATTTTCTAATTATG+AGG - chr3_3:41791082-41791101 Msa0452710:intron 25.0%
! TCTAATTATGAGGAAGAAAT+TGG - chr3_3:41791092-41791111 Msa0452710:intron 25.0%
! GAACTTGAAAATATTCGTAA+AGG - chr3_3:41791152-41791171 Msa0452710:intron 25.0%
! AAAAAAAAAGGGACAAAAAG+AGG + chr3_3:41791192-41791211 None:intergenic 25.0%
!!! TTCTAAAACTCTCAAATAAG+AGG - chr3_3:41791214-41791233 Msa0452710:intron 25.0%
!! TCTAAAACTCTCAAATAAGA+GGG - chr3_3:41791215-41791234 Msa0452710:intron 25.0%
!!! ATTGTTTGCCACTTTTAAAA+GGG + chr3_3:41791392-41791411 None:intergenic 25.0%
!!! AATTGTTTGCCACTTTTAAA+AGG + chr3_3:41791393-41791412 None:intergenic 25.0%
! TAAAAGTGGCAAACAATTAT+TGG - chr3_3:41791395-41791414 Msa0452710:intron 25.0%
!!! CAACCTATTATTTTGCTAAT+TGG + chr3_3:41791504-41791523 None:intergenic 25.0%
! ATAGTCATTGAACAGAATAA+AGG + chr3_3:41791700-41791719 None:intergenic 25.0%
! ATGTGAACTTCATTATTGTT+TGG + chr3_3:41791900-41791919 None:intergenic 25.0%
! ATGAAGATAAAATAACAGTG+TGG - chr3_3:41792069-41792088 Msa0452710:intron 25.0%
! ACATGTTAGTAGTGATTTAA+AGG + chr3_3:41792129-41792148 None:intergenic 25.0%
! TCATTGTATTGAAATACATC+AGG + chr3_3:41792452-41792471 None:intergenic 25.0%
! TTAATCATTCACTTAAATCG+CGG - chr3_3:41792549-41792568 Msa0452710:intron 25.0%
! TTAATAATATTTCATGAGCC+AGG + chr3_3:41792607-41792626 None:intergenic 25.0%
! TTATAAACAAAAATGCGTCA+GGG + chr3_3:41792785-41792804 None:intergenic 25.0%
! ATTATAAACAAAAATGCGTC+AGG + chr3_3:41792786-41792805 None:intergenic 25.0%
!!! AATAAAGCTTCTATTTTGGT+TGG - chr3_3:41792960-41792979 Msa0452710:intron 25.0%
!!! TTTTGCCTTTAGAAGTTATA+TGG - chr3_3:41793800-41793819 Msa0452710:intron 25.0%
!! ATAGCATATACAAACAGTTT+TGG + chr3_3:41793885-41793904 None:intergenic 25.0%
!!! TATGTAGGGTGATTTTTTAT+TGG - chr3_3:41794112-41794131 Msa0452710:intron 25.0%
!!! TGATTTTTTATTGGTTTGCA+AGG - chr3_3:41794121-41794140 Msa0452710:intron 25.0%
!!! TTTTAAAAGATTAGTTTGGG+TGG + chr3_3:41794156-41794175 None:intergenic 25.0%
!!! CCCAAACTAATCTTTTAAAA+TGG - chr3_3:41794156-41794175 Msa0452710:intron 25.0%
! TAAATGGTTAAGTAATACCA+AGG + chr3_3:41794212-41794231 None:intergenic 25.0%
! CTTAACCATTTAAATTGATG+AGG - chr3_3:41794220-41794239 Msa0452710:intron 25.0%
! CTATACCTCATCAATTTAAA+TGG + chr3_3:41794228-41794247 None:intergenic 25.0%
!!! TGTTTTGATTTTGTAGGAAA+AGG + chr3_3:41794322-41794341 None:intergenic 25.0%
! TTTCCTACAAAATCAAAACA+TGG - chr3_3:41794322-41794341 Msa0452710:intron 25.0%
! ATAATTTATATTACCTCTGC+AGG - chr3_3:41795139-41795158 Msa0452710:intron 25.0%
! AAACAACAATCACAGTAATA+AGG + chr3_3:41795453-41795472 None:intergenic 25.0%
! ATTACAATTGTGCTTATAGT+TGG - chr3_3:41795875-41795894 Msa0452710:CDS 25.0%
!! GTATTTTCCACCTTTATAAA+AGG - chr3_3:41796195-41796214 Msa0452710:intron 25.0%
! AGTACATCTGATATGAAATT+TGG - chr3_3:41796335-41796354 Msa0452710:intron 25.0%
!! AACTTAAAAAGTATGTACTC+AGG + chr3_3:41796415-41796434 None:intergenic 25.0%
! AAAGTACATTATACATCCTT+TGG - chr3_3:41796600-41796619 Msa0452710:intron 25.0%
! AAAATGACTAAATAAGCAGA+AGG + chr3_3:41796635-41796654 None:intergenic 25.0%
!! TTTTATACTAGCTGAAGTTA+TGG - chr3_3:41796778-41796797 Msa0452710:intron 25.0%
! TTTATACTAGCTGAAGTTAT+GGG - chr3_3:41796779-41796798 Msa0452710:intron 25.0%
! ATGAAAAAGAAACATATAGG+TGG + chr3_3:41796807-41796826 None:intergenic 25.0%
! GTAATAGCAATAAATACAGT+TGG + chr3_3:41797099-41797118 None:intergenic 25.0%
!! TGTATTTATTGCTATTACAC+AGG - chr3_3:41797101-41797120 Msa0452710:intron 25.0%
!!! GATATATTTTGTTGATGATG+TGG - chr3_3:41797136-41797155 Msa0452710:intron 25.0%
!!! TCTATCCATTTAGTTTTTCA+TGG - chr3_3:41797232-41797251 Msa0452710:CDS 25.0%
!!! ATTATTTGTTTCTGAGAGAA+CGG - chr3_3:41797323-41797342 Msa0452710:intron 25.0%
! TTCAGATATTTGTCTTTCTA+AGG - chr3_3:41797419-41797438 Msa0452710:intron 25.0%
!!! ATATTTGTCTTTCTAAGGTT+TGG - chr3_3:41797424-41797443 Msa0452710:intron 25.0%
! AAAGAGAATTCAAAACAAGT+TGG + chr3_3:41797475-41797494 None:intergenic 25.0%
!! TAATGAAATTGACTTCTAAC+TGG + chr3_3:41797687-41797706 None:intergenic 25.0%
! AAGCTTGAGAATAAGAATAT+CGG - chr3_3:41797800-41797819 Msa0452710:intron 25.0%
! AGATATCCAAATGAAACTAA+TGG + chr3_3:41797851-41797870 None:intergenic 25.0%
! AGTTTCATTTGGATATCTAA+TGG - chr3_3:41797853-41797872 Msa0452710:intron 25.0%
!!! ATCAGAAGTTGTCATTTTTA+AGG - chr3_3:41797961-41797980 Msa0452710:intron 25.0%
!!! ACATGAATTATGTGTTTTAG+AGG + chr3_3:41798036-41798055 None:intergenic 25.0%
! ATCGATGATATTATTTCAGT+TGG + chr3_3:41798060-41798079 None:intergenic 25.0%
!! TACTTTTACAGTGTAAAAAG+AGG + chr3_3:41798130-41798149 None:intergenic 25.0%
!!! GTTAAGAAATAGTGGATAAA+CGG + chr3_3:41798224-41798243 None:intergenic 25.0%
!!! TAAAGGTTTTTTCAGGTTTA+AGG + chr3_3:41798293-41798312 None:intergenic 25.0%
! GTCTATTCAAATAATCAAAC+AGG + chr3_3:41798429-41798448 None:intergenic 25.0%
! AAAGACAGAATTTGGTAAAA+CGG + chr3_3:41798775-41798794 None:intergenic 25.0%
! AACTGATAAAAGACAGAATT+TGG + chr3_3:41798783-41798802 None:intergenic 25.0%
!! GAAAAAGTACAAGATCATTA+GGG + chr3_3:41798921-41798940 None:intergenic 25.0%
! ATAATATAACCAACTATGGT+TGG + chr3_3:41798943-41798962 None:intergenic 25.0%
!! ATTTTATTCCTTGCCAATTT+CGG - chr3_3:41799164-41799183 Msa0452710:intron 25.0%
!! GTCTCATATTCTATATGTTT+TGG - chr3_3:41799454-41799473 Msa0452710:five_prime_UTR 25.0%
! ACTGGAAAATATATAACCAA+TGG - chr3_3:41799504-41799523 Msa0452710:five_prime_UTR 25.0%
!! CAATTTCTAGAAAATACCAT+TGG + chr3_3:41799523-41799542 None:intergenic 25.0%
!! CTAGAAATTGAATATTGGTT+TGG - chr3_3:41799533-41799552 Msa0452710:intron 25.0%
! AACATACCCAAATTCACTTT+TGG - chr3_3:41789584-41789603 Msa0452710:three_prime_UTR 30.0%
! AACATACCCAAATTCACTTT+TGG - chr3_3:41789584-41789603 Msa0452710:three_prime_UTR 30.0%
AACACAGAATACAAAAATGG+CGG - chr3_3:41789747-41789766 Msa0452710:three_prime_UTR 30.0%
TTGTAGATGTTAGATGAAAG+TGG - chr3_3:41790009-41790028 Msa0452710:intron 30.0%
!!! GTGGAAGATTTTTAACTTGT+TGG - chr3_3:41790028-41790047 Msa0452710:intron 30.0%
GAGAATGTTATTGTTTGAGT+GGG - chr3_3:41790152-41790171 Msa0452710:intron 30.0%
AGTTAGTAGAAGTGATTAAG+AGG - chr3_3:41790340-41790359 Msa0452710:CDS 30.0%
GTTAGTAGAAGTGATTAAGA+GGG - chr3_3:41790341-41790360 Msa0452710:CDS 30.0%
CGAATTTGGAAGAACTTATA+TGG + chr3_3:41790550-41790569 None:intergenic 30.0%
TATAAGTTCTTCCAAATTCG+CGG - chr3_3:41790550-41790569 Msa0452710:intron 30.0%
! TGCAAACATGTAATTTGCAT+TGG - chr3_3:41790658-41790677 Msa0452710:intron 30.0%
! GCAAACATGTAATTTGCATT+GGG - chr3_3:41790659-41790678 Msa0452710:intron 30.0%
AATTTGCATTGGGAAATGTT+TGG - chr3_3:41790669-41790688 Msa0452710:intron 30.0%
GAAGTGCAGTTGTAAAAATT+CGG + chr3_3:41790723-41790742 None:intergenic 30.0%
! TTTTATAGAGTCAGAAACCA+AGG + chr3_3:41790793-41790812 None:intergenic 30.0%
AATGATAAGGTGAACTTCAA+AGG + chr3_3:41790844-41790863 None:intergenic 30.0%
! TTTGAAGTTCACCTTATCAT+TGG - chr3_3:41790843-41790862 Msa0452710:intron 30.0%
TTGAAGTTCACCTTATCATT+GGG - chr3_3:41790844-41790863 Msa0452710:intron 30.0%
AGAAAATACGCAATACTCTT+CGG + chr3_3:41791075-41791094 None:intergenic 30.0%
AAATTGGAAAGTCAAGTAGT+AGG - chr3_3:41791108-41791127 Msa0452710:intron 30.0%
! TTCAAGTTCATCCAAACAAA+GGG + chr3_3:41791141-41791160 None:intergenic 30.0%
!! TTTCAAGTTCATCCAAACAA+AGG + chr3_3:41791142-41791161 None:intergenic 30.0%
TTATGTTAGCTGGATATGTT+TGG + chr3_3:41791276-41791295 None:intergenic 30.0%
TAAAACCACATAATTGAGCT+AGG + chr3_3:41791319-41791338 None:intergenic 30.0%
!!! TTGTTTGCCACTTTTAAAAG+GGG + chr3_3:41791391-41791410 None:intergenic 30.0%
GTCCCAATTAGCAAAATAAT+AGG - chr3_3:41791498-41791517 Msa0452710:intron 30.0%
!! TTGTTGCTTTATGACCAAAT+TGG - chr3_3:41791578-41791597 Msa0452710:CDS 30.0%
ACATTGAAGATGATAAAAGC+TGG + chr3_3:41791792-41791811 None:intergenic 30.0%
! AATAATTCATAAGAGGTGTG+TGG + chr3_3:41791829-41791848 None:intergenic 30.0%
TGAAGTTCACATCTATAGAT+TGG - chr3_3:41791908-41791927 Msa0452710:intron 30.0%
AACTATAAAGTAGCATTCAC+AGG - chr3_3:41792190-41792209 Msa0452710:intron 30.0%
AAGTTTGTGACAACACAAAA+AGG - chr3_3:41792245-41792264 Msa0452710:intron 30.0%
!! TCAAAGTACTGAGCAAATAT+GGG - chr3_3:41792287-41792306 Msa0452710:intron 30.0%
TTCTTCAGACTTAAAGTTCA+TGG + chr3_3:41792333-41792352 None:intergenic 30.0%
TAATCATTCACTTAAATCGC+GGG - chr3_3:41792550-41792569 Msa0452710:intron 30.0%
! GAAGTGTGTAAAAAGCTTTT+AGG + chr3_3:41792631-41792650 None:intergenic 30.0%
TCATGATAATATTGGCATCA+AGG + chr3_3:41792752-41792771 None:intergenic 30.0%
GATGAAACAACTAATTTGGT+TGG - chr3_3:41792806-41792825 Msa0452710:intron 30.0%
TAATAGTTTCCAAGCAAGTA+TGG - chr3_3:41792837-41792856 Msa0452710:CDS 30.0%
AATATGTTGGGATAATCAAC+AGG + chr3_3:41793725-41793744 None:intergenic 30.0%
!! TGCATTGCTGAATTTTGTTT+TGG - chr3_3:41793829-41793848 Msa0452710:intron 30.0%
TTGTATATGCTATTATGAGC+AGG - chr3_3:41793892-41793911 Msa0452710:intron 30.0%
! TAGTTTTTATGTTTGCACTC+TGG - chr3_3:41793994-41794013 Msa0452710:CDS 30.0%
ACTATGGTCAACAAAGATAA+TGG + chr3_3:41794025-41794044 None:intergenic 30.0%
!!! CATCCATGTTTTGATTTTGT+AGG + chr3_3:41794328-41794347 None:intergenic 30.0%
! AGGTTGAGTTAACGATATTT+TGG + chr3_3:41795039-41795058 None:intergenic 30.0%
! TATATGTTTTGTCAGCTACT+AGG - chr3_3:41795348-41795367 Msa0452710:intron 30.0%
ACTTGTGATCATAACAAGTA+GGG - chr3_3:41795609-41795628 Msa0452710:intron 30.0%
TAAGGAAGATGTATTGTATC+CGG - chr3_3:41795852-41795871 Msa0452710:intron 30.0%
CTATAAGCACAATTGTAATC+CGG + chr3_3:41795874-41795893 None:intergenic 30.0%
! ATCTACACCTTTTATAAAGG+TGG + chr3_3:41796205-41796224 None:intergenic 30.0%
! TGCATCTACACCTTTTATAA+AGG + chr3_3:41796208-41796227 None:intergenic 30.0%
GATAATAACAACTCTGAATG+TGG - chr3_3:41796234-41796253 Msa0452710:intron 30.0%
TTGATGTTTGCATGTCAAAT+TGG - chr3_3:41796294-41796313 Msa0452710:intron 30.0%
ATCTGATATGAAATTTGGAG+AGG - chr3_3:41796340-41796359 Msa0452710:intron 30.0%
CAAAATCAACAAATCACATG+AGG + chr3_3:41796384-41796403 None:intergenic 30.0%
GGATGTATAATGTACTTTAC+AGG + chr3_3:41796598-41796617 None:intergenic 30.0%
TTTCTTACCTACATAAGCTA+GGG + chr3_3:41796740-41796759 None:intergenic 30.0%
! TTTTCTTACCTACATAAGCT+AGG + chr3_3:41796741-41796760 None:intergenic 30.0%
! TTGATGCTATTAGGTTTTCA+TGG - chr3_3:41796937-41796956 Msa0452710:intron 30.0%
TAAAAAACCATGGTTACTTG+TGG - chr3_3:41797030-41797049 Msa0452710:intron 30.0%
TGGAAACTTTGTATCTTGTT+TGG - chr3_3:41797050-41797069 Msa0452710:intron 30.0%
AACTAAATGGATAGAAAGAG+TGG + chr3_3:41797227-41797246 None:intergenic 30.0%
GAAGACCATGAAAAACTAAA+TGG + chr3_3:41797240-41797259 None:intergenic 30.0%
!!! TTACTGATATTTTCTGGAAC+TGG - chr3_3:41797272-41797291 Msa0452710:CDS 30.0%
!!! TTGTTTTGAATTCTCTTTCC+AGG - chr3_3:41797477-41797496 Msa0452710:intron 30.0%
! TGGAAGAGAAGTTAGTATTT+TGG - chr3_3:41797500-41797519 Msa0452710:intron 30.0%
GGAAAAAACACAACAAAAGA+AGG + chr3_3:41797541-41797560 None:intergenic 30.0%
!!! TTTGTTGTGTTTTTTCCTCT+AGG - chr3_3:41797544-41797563 Msa0452710:intron 30.0%
!!! TTGTTGTGTTTTTTCCTCTA+GGG - chr3_3:41797545-41797564 Msa0452710:intron 30.0%
ACAGGTAAACTACATTTCTT+AGG - chr3_3:41797626-41797645 Msa0452710:intron 30.0%
CTAATGTGAGAAAATTGAAG+AGG - chr3_3:41797720-41797739 Msa0452710:intron 30.0%
AGCTTGAGAATAAGAATATC+GGG - chr3_3:41797801-41797820 Msa0452710:intron 30.0%
! TCATCGATTGTAGTTGTATT+AGG - chr3_3:41798072-41798091 Msa0452710:intron 30.0%
TTAGGTCAAACTAGTGAAAT+CGG - chr3_3:41798090-41798109 Msa0452710:intron 30.0%
ACGGTCTTCATTATATTATG+AGG + chr3_3:41798205-41798224 None:intergenic 30.0%
! ATCCACTATTTCTTAACTTC+AGG - chr3_3:41798227-41798246 Msa0452710:intron 30.0%
!! GGTTATAATATTTGGTTCTG+CGG - chr3_3:41798325-41798344 Msa0452710:intron 30.0%
!! CGAAATTTTGTAGCTACTTT+AGG + chr3_3:41798623-41798642 None:intergenic 30.0%
AACTCGTATAAACTAAGCTT+TGG + chr3_3:41798681-41798700 None:intergenic 30.0%
! GGAAAAAGTACAAGATCATT+AGG + chr3_3:41798922-41798941 None:intergenic 30.0%
TTCGATTGAAAGTAGATTTC+AGG - chr3_3:41798980-41798999 Msa0452710:intron 30.0%
AATTGGCAAGGAATAAAATC+AGG + chr3_3:41799163-41799182 None:intergenic 30.0%
!! GTAGATTTAATTTGGTTGTG+AGG - chr3_3:41799345-41799364 Msa0452710:intron 30.0%
! TTAATTTGGTTGTGAGGAAT+TGG - chr3_3:41799351-41799370 Msa0452710:intron 30.0%
AATTTCATGCAATGAATCAC+TGG - chr3_3:41799486-41799505 Msa0452710:five_prime_UTR 30.0%
AATGTATCCATGAATATGAG+AGG + chr3_3:41799568-41799587 None:intergenic 30.0%
TTAAGGGAATTGAATATGAG+AGG + chr3_3:41799596-41799615 None:intergenic 30.0%
GAGAGACCAAAAGTGAATTT+GGG + chr3_3:41789593-41789612 None:intergenic 35.0%
AGAGAGACCAAAAGTGAATT+TGG + chr3_3:41789594-41789613 None:intergenic 35.0%
GAGAGACCAAAAGTGAATTT+GGG + chr3_3:41789593-41789612 None:intergenic 35.0%
AGAGAGACCAAAAGTGAATT+TGG + chr3_3:41789594-41789613 None:intergenic 35.0%
GTATGCAAGACAACAAGTAA+AGG + chr3_3:41789675-41789694 None:intergenic 35.0%
GTATTCTGTGTTGAAACCAA+CGG + chr3_3:41789739-41789758 None:intergenic 35.0%
AGAGTGGTTACTAGATTGAT+CGG + chr3_3:41789824-41789843 None:intergenic 35.0%
AAAAGGAAAGAAGAGAAGAG+TGG + chr3_3:41789840-41789859 None:intergenic 35.0%
ATGCAGCTATGATCTTTGTT+TGG - chr3_3:41789974-41789993 Msa0452710:intron 35.0%
TTCGTGTGTGTGATTTGAAT+CGG - chr3_3:41790074-41790093 Msa0452710:intron 35.0%
GGAGAATGTTATTGTTTGAG+TGG - chr3_3:41790151-41790170 Msa0452710:intron 35.0%
TGTATTACTCACATAGACAC+CGG - chr3_3:41790188-41790207 Msa0452710:intron 35.0%
TTGAATGTACTCACATGTGT+CGG - chr3_3:41790268-41790287 Msa0452710:intron 35.0%
!! GAAGTGATTAAGAGGGTATT+TGG - chr3_3:41790348-41790367 Msa0452710:CDS 35.0%
ACTACTAGATTAGAGCTCAT+AGG - chr3_3:41790375-41790394 Msa0452710:intron 35.0%
CTACTAGATTAGAGCTCATA+GGG - chr3_3:41790376-41790395 Msa0452710:intron 35.0%
! GCTTTTGTAAATGTTTGTGG+AGG - chr3_3:41790506-41790525 Msa0452710:intron 35.0%
ATAAGTTCTTCCAAATTCGC+GGG - chr3_3:41790551-41790570 Msa0452710:intron 35.0%
TGGGAAATGTTTGGATGAAA+AGG - chr3_3:41790678-41790697 Msa0452710:intron 35.0%
GGGAAATGTTTGGATGAAAA+GGG - chr3_3:41790679-41790698 Msa0452710:intron 35.0%
GGAAATGTTTGGATGAAAAG+GGG - chr3_3:41790680-41790699 Msa0452710:intron 35.0%
! AATCTGTAACAGTGGTAATG+AGG - chr3_3:41790814-41790833 Msa0452710:intron 35.0%
GTTATTCCTTCCCAATGATA+AGG + chr3_3:41790857-41790876 None:intergenic 35.0%
!! TATTCGTAAAGGCGTAGTTT+TGG - chr3_3:41791163-41791182 Msa0452710:intron 35.0%
TCGCAACTAATTATGTTAGC+TGG + chr3_3:41791286-41791305 None:intergenic 35.0%
AAAAGCCTAGCTCAATTATG+TGG - chr3_3:41791311-41791330 Msa0452710:intron 35.0%
TTTAAAAGGGGGAAAACATG+TGG + chr3_3:41791379-41791398 None:intergenic 35.0%
!! TGTTTTCCCCCTTTTAAAAG+TGG - chr3_3:41791381-41791400 Msa0452710:intron 35.0%
!!! TGTTTGCCACTTTTAAAAGG+GGG + chr3_3:41791390-41791409 None:intergenic 35.0%
TTATGACCAAATTGGAGACT+TGG - chr3_3:41791586-41791605 Msa0452710:CDS 35.0%
TTTACAAAGACTAAGTGTGG+AGG + chr3_3:41791612-41791631 None:intergenic 35.0%
! TCCACACTTAGTCTTTGTAA+AGG - chr3_3:41791611-41791630 Msa0452710:intron 35.0%
TCCTTTACAAAGACTAAGTG+TGG + chr3_3:41791615-41791634 None:intergenic 35.0%
! ATAAGAGGTGTGTGGTAAAT+TGG + chr3_3:41791821-41791840 None:intergenic 35.0%
! ATAGATTGGTCGAAGACAAA+TGG - chr3_3:41791922-41791941 Msa0452710:intron 35.0%
! TAGATTGGTCGAAGACAAAT+GGG - chr3_3:41791923-41791942 Msa0452710:intron 35.0%
! AAAGGTGCATGTTCTTCAAA+AGG - chr3_3:41791947-41791966 Msa0452710:intron 35.0%
AATAACAGTGTGGACATGTT+AGG - chr3_3:41792079-41792098 Msa0452710:intron 35.0%
!! GTCAAAGTACTGAGCAAATA+TGG - chr3_3:41792286-41792305 Msa0452710:intron 35.0%
TCAATACAATGAACTGAGAG+CGG - chr3_3:41792460-41792479 Msa0452710:CDS 35.0%
! AAGCTTTTTACACACTTCCT+TGG - chr3_3:41792633-41792652 Msa0452710:intron 35.0%
AATCCTATTCACTCAGATTG+CGG + chr3_3:41792683-41792702 None:intergenic 35.0%
AAGGTTGTCAAAATCGTAAC+TGG + chr3_3:41792733-41792752 None:intergenic 35.0%
CAATGAATTCCATACTTGCT+TGG + chr3_3:41792849-41792868 None:intergenic 35.0%
CAAGCAAGTATGGAATTCAT+TGG - chr3_3:41792847-41792866 Msa0452710:CDS 35.0%
! TTTCTTTTACCAGCATGATC+AGG - chr3_3:41793017-41793036 Msa0452710:CDS 35.0%
AGCATGATCAGGTAATATCT+GGG - chr3_3:41793028-41793047 Msa0452710:intron 35.0%
TCCAATGTTCAAAATCACAC+AGG + chr3_3:41793117-41793136 None:intergenic 35.0%
! GTTTTCTTGCTAGATATGTC+TGG - chr3_3:41793220-41793239 Msa0452710:intron 35.0%
! TACCAACTCTTGTTATCCTT+AGG - chr3_3:41793265-41793284 Msa0452710:intron 35.0%
! GGAATGTGTTTCATACCTTT+TGG + chr3_3:41793324-41793343 None:intergenic 35.0%
CTTTCAACTCTTAGATGACT+TGG + chr3_3:41793401-41793420 None:intergenic 35.0%
CCACTAAGTTTAATCCAACA+GGG + chr3_3:41793451-41793470 None:intergenic 35.0%
TCCACTAAGTTTAATCCAAC+AGG + chr3_3:41793452-41793471 None:intergenic 35.0%
! AACTTAGTGGATGTGATTGA+AGG - chr3_3:41793461-41793480 Msa0452710:intron 35.0%
! AGCCAAAGTCTTTTATGTCT+TGG - chr3_3:41793559-41793578 Msa0452710:intron 35.0%
! GCCAAAGTCTTTTATGTCTT+GGG - chr3_3:41793560-41793579 Msa0452710:intron 35.0%
ACCCAAGACATAAAAGACTT+TGG + chr3_3:41793564-41793583 None:intergenic 35.0%
ATTATGAGCAGGAAAACAAC+TGG - chr3_3:41793903-41793922 Msa0452710:intron 35.0%
! AACTTGGTGAATGAAGTGTT+AGG + chr3_3:41793942-41793961 None:intergenic 35.0%
TTTCAGGGTGCAAATAAACT+TGG + chr3_3:41793958-41793977 None:intergenic 35.0%
TTTGCACCCTGAAAATATGA+TGG - chr3_3:41793964-41793983 Msa0452710:CDS 35.0%
! GCACAACCATCATATTTTCA+GGG + chr3_3:41793973-41793992 None:intergenic 35.0%
! ATGGTCAACAAAGATAATGG+TGG + chr3_3:41794022-41794041 None:intergenic 35.0%
ACAGTCAAGACTCAAAACTA+TGG + chr3_3:41794041-41794060 None:intergenic 35.0%
GTGACTAGAATTCAACTTTG+AGG - chr3_3:41794295-41794314 Msa0452710:intron 35.0%
TTGTGATCTTGTTGAGAATG+TGG - chr3_3:41794424-41794443 Msa0452710:intron 35.0%
GAGATTGATGAAGAATCTCA+TGG - chr3_3:41794466-41794485 Msa0452710:intron 35.0%
CTATCAATTTCTCTTCGCAA+TGG + chr3_3:41794493-41794512 None:intergenic 35.0%
CACGAACATGAAATGAACAA+AGG + chr3_3:41794662-41794681 None:intergenic 35.0%
ATTTATATTACCTCTGCAGG+TGG - chr3_3:41795142-41795161 Msa0452710:intron 35.0%
TTTATATTACCTCTGCAGGT+GGG - chr3_3:41795143-41795162 Msa0452710:intron 35.0%
GCAAGAATACCAACATTATC+GGG + chr3_3:41795225-41795244 None:intergenic 35.0%
CGCAAGAATACCAACATTAT+CGG + chr3_3:41795226-41795245 None:intergenic 35.0%
CACTTGTGATCATAACAAGT+AGG - chr3_3:41795608-41795627 Msa0452710:intron 35.0%
GTTCAAAGTCGAATTGGTTA+CGG - chr3_3:41795719-41795738 Msa0452710:intron 35.0%
TATGTAACTATCCGTGTCTT+TGG + chr3_3:41795747-41795766 None:intergenic 35.0%
CAGTCAAAAGAAAAACAACG+TGG + chr3_3:41796133-41796152 None:intergenic 35.0%
AGAAAATTCTCTCCTCTTAC+TGG - chr3_3:41796755-41796774 Msa0452710:intron 35.0%
GCTAGTATAAAACCAGTAAG+AGG + chr3_3:41796770-41796789 None:intergenic 35.0%
AGATGACAACTAAACCTCAA+TGG + chr3_3:41796877-41796896 None:intergenic 35.0%
GGCAGATTCTTAAAAAACCA+TGG - chr3_3:41797020-41797039 Msa0452710:intron 35.0%
AAAGTTTCCACAAGTAACCA+TGG + chr3_3:41797040-41797059 None:intergenic 35.0%
! TATCTTGTTTGGTCTGTTTG+TGG - chr3_3:41797061-41797080 Msa0452710:intron 35.0%
!! TCTGTTTGTGGTTTTACTTG+TGG - chr3_3:41797073-41797092 Msa0452710:intron 35.0%
!!! TCACTGTATGACTTGTTTTC+AGG - chr3_3:41797299-41797318 Msa0452710:intron 35.0%
! TTTTGAATTCTCTTTCCAGG+TGG - chr3_3:41797480-41797499 Msa0452710:intron 35.0%
!!! TGTTGTGTTTTTTCCTCTAG+GGG - chr3_3:41797546-41797565 Msa0452710:intron 35.0%
GTATCATCTGGATCAAGATA+TGG - chr3_3:41797600-41797619 Msa0452710:intron 35.0%
TGAGAAAATTGAAGAGGTTG+TGG - chr3_3:41797726-41797745 Msa0452710:intron 35.0%
! GCTTAAATTAGTCTCATGCT+AGG + chr3_3:41797784-41797803 None:intergenic 35.0%
TCTCTGTTTGCAAAAGTAAC+AGG + chr3_3:41797928-41797947 None:intergenic 35.0%
CTCCTGAAGTTAAGAAATAG+TGG + chr3_3:41798232-41798251 None:intergenic 35.0%
AGTTGAGGTTTAGCATTATC+TGG - chr3_3:41798267-41798286 Msa0452710:intron 35.0%
! TTCCTCATGCCTTTCTTTTA+TGG - chr3_3:41798377-41798396 Msa0452710:intron 35.0%
TGTGCTTAGCCATAAAAGAA+AGG + chr3_3:41798389-41798408 None:intergenic 35.0%
! TCTTTTATGGCTAAGCACAT+TGG - chr3_3:41798390-41798409 Msa0452710:intron 35.0%
!! TATCAGTTCTCTGAAGCATT+TGG - chr3_3:41798795-41798814 Msa0452710:intron 35.0%
!! ATCAGTTCTCTGAAGCATTT+GGG - chr3_3:41798796-41798815 Msa0452710:intron 35.0%
!! GAAGCATTTGGGAAGTTTTA+TGG - chr3_3:41798807-41798826 Msa0452710:intron 35.0%
! TTTTATGGCCAATCCAAGTA+TGG - chr3_3:41798822-41798841 Msa0452710:intron 35.0%
GTTGAAACTTCAAAAACACG+TGG - chr3_3:41798861-41798880 Msa0452710:intron 35.0%
!!! GTACTTTTTCCAACCATAGT+TGG - chr3_3:41798931-41798950 Msa0452710:intron 35.0%
!!! GTGACTGATGTGTTTTTTTC+CGG - chr3_3:41799028-41799047 Msa0452710:intron 35.0%
! TGTAGTTCTATCATACCTCT+TGG - chr3_3:41799053-41799072 Msa0452710:intron 35.0%
AAGAATTGCTGTATGGGATT+TGG - chr3_3:41799236-41799255 Msa0452710:intron 35.0%
TTAGTAATTGTCCCATCTTC+TGG - chr3_3:41799293-41799312 Msa0452710:intron 35.0%
TAGTAATTGTCCCATCTTCT+GGG - chr3_3:41799294-41799313 Msa0452710:intron 35.0%
! AGAGATTTTACCCAGAAGAT+GGG + chr3_3:41799307-41799326 None:intergenic 35.0%
! TAGAGATTTTACCCAGAAGA+TGG + chr3_3:41799308-41799327 None:intergenic 35.0%
GTCGCGTTGTAGATTTAATT+TGG - chr3_3:41799337-41799356 Msa0452710:intron 35.0%
ATGAGACTATGTCATCATAC+AGG + chr3_3:41799441-41799460 None:intergenic 35.0%
! TTTAGAGCCTCTCATATTCA+TGG - chr3_3:41799558-41799577 Msa0452710:intron 35.0%
GAGTGGTTACTAGATTGATC+GGG + chr3_3:41789823-41789842 None:intergenic 40.0%
ATCTTAGATTCCCGCGAATT+TGG + chr3_3:41790564-41790583 None:intergenic 40.0%
AATGTTTGGATGAAAAGGGG+AGG - chr3_3:41790683-41790702 Msa0452710:intron 40.0%
ATGTTTGGATGAAAAGGGGA+GGG - chr3_3:41790684-41790703 Msa0452710:intron 40.0%
TTTCCCTCCTATTGTAGACA+GGG - chr3_3:41790755-41790774 Msa0452710:intron 40.0%
AGTTCACCTTATCATTGGGA+AGG - chr3_3:41790848-41790867 Msa0452710:intron 40.0%
TACTAGAATGAGTACATGGC+AGG + chr3_3:41791052-41791071 None:intergenic 40.0%
TCGGTACTAGAATGAGTACA+TGG + chr3_3:41791056-41791075 None:intergenic 40.0%
TAGGTCTCTTTCCCTTTGTT+TGG - chr3_3:41791127-41791146 Msa0452710:intron 40.0%
TGGAGGAAATTGCAGTAGAA+AGG + chr3_3:41791252-41791271 None:intergenic 40.0%
GTTAGCTGGATATGTTTGGA+TGG + chr3_3:41791272-41791291 None:intergenic 40.0%
! ATAGTTACCTCCTTTTGCAG+TGG - chr3_3:41791863-41791882 Msa0452710:intron 40.0%
! TTCTTCAAAAGGTACACTGC+TGG - chr3_3:41791958-41791977 Msa0452710:intron 40.0%
TTCTAGATGTGAGCACAGTT+AGG - chr3_3:41792029-41792048 Msa0452710:CDS 40.0%
TCTAGATGTGAGCACAGTTA+GGG - chr3_3:41792030-41792049 Msa0452710:CDS 40.0%
AAGAACTAATGCTTGCGTCT+CGG - chr3_3:41792393-41792412 Msa0452710:intron 40.0%
TGTCATCTCTCACACCATAA+AGG + chr3_3:41792419-41792438 None:intergenic 40.0%
AGAGACTATAGTTGAGTGAG+AGG - chr3_3:41792500-41792519 Msa0452710:CDS 40.0%
GAGACTATAGTTGAGTGAGA+GGG - chr3_3:41792501-41792520 Msa0452710:CDS 40.0%
! TGCGGTATATACGGATTGAA+GGG + chr3_3:41792665-41792684 None:intergenic 40.0%
! TTGCGGTATATACGGATTGA+AGG + chr3_3:41792666-41792685 None:intergenic 40.0%
CACTCAGATTGCGGTATATA+CGG + chr3_3:41792674-41792693 None:intergenic 40.0%
ATACCGCAATCTGAGTGAAT+AGG - chr3_3:41792677-41792696 Msa0452710:intron 40.0%
GCAATCTGAGTGAATAGGAT+TGG - chr3_3:41792682-41792701 Msa0452710:intron 40.0%
TCTGAGTGAATAGGATTGGA+AGG - chr3_3:41792686-41792705 Msa0452710:intron 40.0%
AAGACTGCCAAAATGGCAAT+CGG + chr3_3:41792878-41792897 None:intergenic 40.0%
CAGATATTACCTGATCATGC+TGG + chr3_3:41793029-41793048 None:intergenic 40.0%
CAGCATGATCAGGTAATATC+TGG - chr3_3:41793027-41793046 Msa0452710:intron 40.0%
! AGGTAATATCTGGGATAGAC+TGG - chr3_3:41793037-41793056 Msa0452710:intron 40.0%
! GCCTGTGTGATTTTGAACAT+TGG - chr3_3:41793113-41793132 Msa0452710:intron 40.0%
! AACATTGGACTTTTCACCCT+TGG - chr3_3:41793128-41793147 Msa0452710:intron 40.0%
! AGATATGTCTGGAACCTTGA+AGG - chr3_3:41793231-41793250 Msa0452710:intron 40.0%
GAACCTTGAAGGATCAGAAT+GGG - chr3_3:41793242-41793261 Msa0452710:intron 40.0%
AGCCTAAGGATAACAAGAGT+TGG + chr3_3:41793270-41793289 None:intergenic 40.0%
ATTGAACACAAAGAGCAGCA+CGG + chr3_3:41793296-41793315 None:intergenic 40.0%
TGTGTTCAATGGAGTCCAAA+AGG - chr3_3:41793306-41793325 Msa0452710:intron 40.0%
TAGAAGGTCGGAACAAAACT+GGG + chr3_3:41793352-41793371 None:intergenic 40.0%
CCCTGTTGGATTAAACTTAG+TGG - chr3_3:41793448-41793467 Msa0452710:intron 40.0%
ACAACGGCTTAACTAGAGTT+AGG + chr3_3:41793496-41793515 None:intergenic 40.0%
!! AGGGTAGTAATGGGCAAAAT+TGG + chr3_3:41793634-41793653 None:intergenic 40.0%
! AATTTTGCCCATTACTACCC+TGG - chr3_3:41793633-41793652 Msa0452710:intron 40.0%
GCAGAAAACAAGTTTGCAGT+GGG - chr3_3:41793851-41793870 Msa0452710:intron 40.0%
! CGCACAACCATCATATTTTC+AGG + chr3_3:41793974-41793993 None:intergenic 40.0%
TATGATTTATGACAGGCCCA+TGG - chr3_3:41794871-41794890 Msa0452710:intron 40.0%
ATGATTTATGACAGGCCCAT+GGG - chr3_3:41794872-41794891 Msa0452710:intron 40.0%
ACTGCTTTGATGAGCAGTTT+GGG - chr3_3:41795012-41795031 Msa0452710:intron 40.0%
!! TATCAACTAGAGGTGTCTGT+GGG + chr3_3:41795064-41795083 None:intergenic 40.0%
!! ATATCAACTAGAGGTGTCTG+TGG + chr3_3:41795065-41795084 None:intergenic 40.0%
CTTCAGTGACAAGTGTTTCA+TGG - chr3_3:41795196-41795215 Msa0452710:intron 40.0%
GTGATCATAACAAGTAGGGA+TGG - chr3_3:41795613-41795632 Msa0452710:intron 40.0%
AGCTTGATGTTGTGAACACA+TGG + chr3_3:41795671-41795690 None:intergenic 40.0%
TTTGCATGTCAAATTGGCAC+AGG - chr3_3:41796300-41796319 Msa0452710:intron 40.0%
TTGCATGTCAAATTGGCACA+GGG - chr3_3:41796301-41796320 Msa0452710:intron 40.0%
TGCATCAGTCTTCAAACAGT+GGG + chr3_3:41796455-41796474 None:intergenic 40.0%
TTGCATCAGTCTTCAAACAG+TGG + chr3_3:41796456-41796475 None:intergenic 40.0%
AGCTTGATCTCTCATCATCT+TGG - chr3_3:41796680-41796699 Msa0452710:intron 40.0%
CTCTCATCATCTTGGACATT+CGG - chr3_3:41796688-41796707 Msa0452710:intron 40.0%
CTTGATGTGAGTTTCCATTG+AGG - chr3_3:41796860-41796879 Msa0452710:intron 40.0%
!!! CTGATATTTTCTGGAACTGG+TGG - chr3_3:41797275-41797294 Msa0452710:CDS 40.0%
! GTTTCTGAGAGAACGGTAAT+AGG - chr3_3:41797330-41797349 Msa0452710:intron 40.0%
GGGATATGATTGTAACCCAA+TGG - chr3_3:41797356-41797375 Msa0452710:intron 40.0%
CATCTGCAGCAAAAACCATT+GGG + chr3_3:41797374-41797393 None:intergenic 40.0%
TCATCTGCAGCAAAAACCAT+TGG + chr3_3:41797375-41797394 None:intergenic 40.0%
! GTTTTTGCTGCAGATGAAAG+AGG - chr3_3:41797378-41797397 Msa0452710:intron 40.0%
ATACTAACTTCTCTTCCACC+TGG + chr3_3:41797498-41797517 None:intergenic 40.0%
GAAAAAAACAGTCAGCTCGA+GGG - chr3_3:41797823-41797842 Msa0452710:intron 40.0%
AAAAAAACAGTCAGCTCGAG+GGG - chr3_3:41797824-41797843 Msa0452710:intron 40.0%
! CTTTTGCAAACAGAGATGCA+TGG - chr3_3:41797932-41797951 Msa0452710:intron 40.0%
CACATGACATTACTCAGTTG+AGG - chr3_3:41798252-41798271 Msa0452710:intron 40.0%
! AGCCATAAAAGAAAGGCATG+AGG + chr3_3:41798382-41798401 None:intergenic 40.0%
GGTATGATAGAACTACAAGC+CGG + chr3_3:41799050-41799069 None:intergenic 40.0%
!! GTTTTAGCACATCAGGTTAG+TGG - chr3_3:41799099-41799118 Msa0452710:intron 40.0%
TGATACTTCCCTGAAACTAC+AGG - chr3_3:41799204-41799223 Msa0452710:intron 40.0%
CATCCAATCCTGTAGTTTCA+GGG + chr3_3:41799215-41799234 None:intergenic 40.0%
TGGATGGAAGAATTGCTGTA+TGG - chr3_3:41799229-41799248 Msa0452710:intron 40.0%
GGATGGAAGAATTGCTGTAT+GGG - chr3_3:41799230-41799249 Msa0452710:intron 40.0%
ATGGGATTTGGAAAATGAGC+AGG - chr3_3:41799248-41799267 Msa0452710:intron 40.0%
! AACAAGGTTGGTTGGTTGGT+TGG + chr3_3:41789702-41789721 None:intergenic 45.0%
! ATCTGGTGAACAAGGTTGGT+TGG + chr3_3:41789710-41789729 None:intergenic 45.0%
TGAGATCTGGTGAACAAGGT+TGG + chr3_3:41789714-41789733 None:intergenic 45.0%
AATGCATCACTTGTCACGCT+TGG - chr3_3:41789794-41789813 Msa0452710:three_prime_UTR 45.0%
GTCAGTTTCAGTATCGTGTC+CGG + chr3_3:41790210-41790229 None:intergenic 45.0%
TCAGATGCACCTTTGATCAG+AGG - chr3_3:41790305-41790324 Msa0452710:CDS 45.0%
GAAGAACCTGAGTGACAGAA+AGG - chr3_3:41790589-41790608 Msa0452710:intron 45.0%
CAGAAAGGAGCTAGAAGTTG+TGG - chr3_3:41790604-41790623 Msa0452710:intron 45.0%
! TCTGGAGTGAAGCAATGTGT+AGG - chr3_3:41790628-41790647 Msa0452710:intron 45.0%
CTTTCCCTCCTATTGTAGAC+AGG - chr3_3:41790754-41790773 Msa0452710:intron 45.0%
TTCCCTCCTATTGTAGACAG+GGG - chr3_3:41790756-41790775 Msa0452710:intron 45.0%
TCTTCTCCCCTGTCTACAAT+AGG + chr3_3:41790765-41790784 None:intergenic 45.0%
TGTAGACAGGGGAGAAGAAA+AGG - chr3_3:41790767-41790786 Msa0452710:intron 45.0%
AGCTGGATATGTTTGGATGG+AGG + chr3_3:41791269-41791288 None:intergenic 45.0%
CAAAATGCGACCACTGCAAA+AGG + chr3_3:41791876-41791895 None:intergenic 45.0%
GGTCGAAGACAAATGGGAAA+AGG - chr3_3:41791929-41791948 Msa0452710:intron 45.0%
CTAGATGTGAGCACAGTTAG+GGG - chr3_3:41792031-41792050 Msa0452710:CDS 45.0%
GAGTGAGAGGGAAAGATACT+CGG - chr3_3:41792513-41792532 Msa0452710:intron 45.0%
! GGTATATACGGATTGAAGGG+GGG + chr3_3:41792662-41792681 None:intergenic 45.0%
! CGGTATATACGGATTGAAGG+GGG + chr3_3:41792663-41792682 None:intergenic 45.0%
! GCGGTATATACGGATTGAAG+GGG + chr3_3:41792664-41792683 None:intergenic 45.0%
!! GGATTGTCCGATTGCCATTT+TGG - chr3_3:41792868-41792887 Msa0452710:intron 45.0%
GGGTATGAAGACTGCCAAAA+TGG + chr3_3:41792885-41792904 None:intergenic 45.0%
TAGTTACTTCATCCCACGAC+CGG - chr3_3:41793079-41793098 Msa0452710:intron 45.0%
GGAACCTTGAAGGATCAGAA+TGG - chr3_3:41793241-41793260 Msa0452710:intron 45.0%
GTACCCATTCTGATCCTTCA+AGG + chr3_3:41793248-41793267 None:intergenic 45.0%
! GTGCTGCTCTTTGTGTTCAA+TGG - chr3_3:41793295-41793314 Msa0452710:intron 45.0%
TCGGAACAAAACTGGGACAT+GGG + chr3_3:41793345-41793364 None:intergenic 45.0%
CTAGAAGGTCGGAACAAAAC+TGG + chr3_3:41793353-41793372 None:intergenic 45.0%
GTGAAAACTCTTGTCCCTGT+TGG - chr3_3:41793434-41793453 Msa0452710:intron 45.0%
!! AGTAATGGGCAAAATTGGCC+TGG + chr3_3:41793629-41793648 None:intergenic 45.0%
!! GAAAGCACCAGGGTAGTAAT+GGG + chr3_3:41793643-41793662 None:intergenic 45.0%
!! TGAAAGCACCAGGGTAGTAA+TGG + chr3_3:41793644-41793663 None:intergenic 45.0%
!! TATAGGTGGTGAAAGCACCA+GGG + chr3_3:41793653-41793672 None:intergenic 45.0%
!! ATATAGGTGGTGAAAGCACC+AGG + chr3_3:41793654-41793673 None:intergenic 45.0%
GGCAGAAAACAAGTTTGCAG+TGG - chr3_3:41793850-41793869 Msa0452710:intron 45.0%
AACAAGTTTGCAGTGGGAAG+TGG - chr3_3:41793857-41793876 Msa0452710:intron 45.0%
GAAACCAGTGTCAACACAGA+CGG + chr3_3:41794585-41794604 None:intergenic 45.0%
TTGTGTACAGTTGAGCCCAT+GGG + chr3_3:41794890-41794909 None:intergenic 45.0%
! TACCCAACCTGTTGATGAGT+GGG - chr3_3:41794941-41794960 Msa0452710:intron 45.0%
AACCCACTCATCAACAGGTT+GGG + chr3_3:41794946-41794965 None:intergenic 45.0%
AATCCAACCCACTCATCAAC+AGG + chr3_3:41794951-41794970 None:intergenic 45.0%
!! TGTTGATGAGTGGGTTGGAT+TGG - chr3_3:41794950-41794969 Msa0452710:intron 45.0%
TGCTCATCAAAGCAGTGGAT+GGG + chr3_3:41795008-41795027 None:intergenic 45.0%
CAAACTGCTCATCAAAGCAG+TGG + chr3_3:41795013-41795032 None:intergenic 45.0%
CACTGCTTTGATGAGCAGTT+TGG - chr3_3:41795011-41795030 Msa0452710:intron 45.0%
TCATGGCATCCCGATAATGT+TGG - chr3_3:41795213-41795232 Msa0452710:intron 45.0%
GCTACTAGGATGCACTTGAT+TGG - chr3_3:41795362-41795381 Msa0452710:intron 45.0%
CCAATTCGACTTTGAACGCA+CGG + chr3_3:41795716-41795735 None:intergenic 45.0%
TGGTTACGGTTCCAAAGACA+CGG - chr3_3:41795733-41795752 Msa0452710:intron 45.0%
TCTTCTTGCGACAACATCCA+CGG - chr3_3:41796158-41796177 Msa0452710:intron 45.0%
GCATCAGTCTTCAAACAGTG+GGG + chr3_3:41796454-41796473 None:intergenic 45.0%
!! CAGAAGGTACTCAGATCCAA+AGG + chr3_3:41796619-41796638 None:intergenic 45.0%
!! TAAGCTAGGGTATTGCCACT+TGG + chr3_3:41796727-41796746 None:intergenic 45.0%
GGCAATACCCTAGCTTATGT+AGG - chr3_3:41796730-41796749 Msa0452710:intron 45.0%
ATCACGGAACACGACATTCT+GGG + chr3_3:41797177-41797196 None:intergenic 45.0%
AATCACGGAACACGACATTC+TGG + chr3_3:41797178-41797197 None:intergenic 45.0%
TGAGAGAACGGTAATAGGTG+TGG - chr3_3:41797335-41797354 Msa0452710:intron 45.0%
GAGAGAACGGTAATAGGTGT+GGG - chr3_3:41797336-41797355 Msa0452710:intron 45.0%
CTGCAGATGAAAGAGGAGTT+TGG - chr3_3:41797385-41797404 Msa0452710:intron 45.0%
!! TTTCCTCTAGGGGTTTTGTC+AGG - chr3_3:41797556-41797575 Msa0452710:intron 45.0%
ATACCTGACAAAACCCCTAG+AGG + chr3_3:41797562-41797581 None:intergenic 45.0%
!! AGGGGTTTTGTCAGGTATCT+TGG - chr3_3:41797564-41797583 Msa0452710:intron 45.0%
TTGTCAGGTATCTTGGAGAG+CGG - chr3_3:41797571-41797590 Msa0452710:intron 45.0%
TGGATCAAGATATGGCTCAC+AGG - chr3_3:41797608-41797627 Msa0452710:intron 45.0%
AAGAGGTTGTGGCATGAAAC+TGG - chr3_3:41797737-41797756 Msa0452710:intron 45.0%
AGTCTCATGCTAGGAAGATC+AGG + chr3_3:41797775-41797794 None:intergenic 45.0%
GGAAAAAAACAGTCAGCTCG+AGG - chr3_3:41797822-41797841 Msa0452710:intron 45.0%
AAAAAACAGTCAGCTCGAGG+GGG - chr3_3:41797825-41797844 Msa0452710:intron 45.0%
! AGGGGGCCATTAGTTTCATT+TGG - chr3_3:41797842-41797861 Msa0452710:intron 45.0%
TTCCCACACCATACTTGGAT+TGG + chr3_3:41798833-41798852 None:intergenic 45.0%
ATCGTTTCCCACACCATACT+TGG + chr3_3:41798838-41798857 None:intergenic 45.0%
ATCATACCTCTTGGTGAGCA+TGG - chr3_3:41799062-41799081 Msa0452710:intron 45.0%
AATGTTCCATGCTCACCAAG+AGG + chr3_3:41799071-41799090 None:intergenic 45.0%
GTGAGCATGGAACATTGACA+AGG - chr3_3:41799075-41799094 Msa0452710:intron 45.0%
!! ACAAGGCGTTTTAGCACATC+AGG - chr3_3:41799092-41799111 Msa0452710:intron 45.0%
TTAGCACATCAGGTTAGTGG+TGG - chr3_3:41799102-41799121 Msa0452710:intron 45.0%
TAGCACATCAGGTTAGTGGT+GGG - chr3_3:41799103-41799122 Msa0452710:intron 45.0%
! TCAGGTTAGTGGTGGGAAAA+TGG - chr3_3:41799110-41799129 Msa0452710:intron 45.0%
CCAAAGCAACTAGCCGAAAT+TGG + chr3_3:41799180-41799199 None:intergenic 45.0%
! CCAATTTCGGCTAGTTGCTT+TGG - chr3_3:41799177-41799196 Msa0452710:intron 45.0%
CTTCCCTGAAACTACAGGAT+TGG - chr3_3:41799209-41799228 Msa0452710:intron 45.0%
CCATCCAATCCTGTAGTTTC+AGG + chr3_3:41799216-41799235 None:intergenic 45.0%
CCTGAAACTACAGGATTGGA+TGG - chr3_3:41799213-41799232 Msa0452710:intron 45.0%
TGGTTGTGAGGAATTGGAAG+TGG - chr3_3:41799357-41799376 Msa0452710:intron 45.0%
TGAGGAATTGGAAGTGGTCA+AGG - chr3_3:41799363-41799382 Msa0452710:CDS 45.0%
!! ATATATATTATAAATAGAAA+AGG - chr3_3:41790897-41790916 Msa0452710:intron 5.0%
!!! CATATAATTAATTATTATTT+TGG + chr3_3:41791997-41792016 None:intergenic 5.0%
!! AAAAAAAATTATGATAATAT+GGG + chr3_3:41792905-41792924 None:intergenic 5.0%
!! AATAATAATAATAATATGTT+GGG + chr3_3:41793737-41793756 None:intergenic 5.0%
!! TAATAATAATAATAATATGT+TGG + chr3_3:41793738-41793757 None:intergenic 5.0%
!! AAAAAATTGTAAAATATTAA+GGG + chr3_3:41795477-41795496 None:intergenic 5.0%
!! AAAAAAATTGTAAAATATTA+AGG + chr3_3:41795478-41795497 None:intergenic 5.0%
!!! TATTCTTTTTTAAAAATATT+TGG - chr3_3:41796996-41797015 Msa0452710:intron 5.0%
!!! ATTCTTTTTTAAAAATATTT+GGG - chr3_3:41796997-41797016 Msa0452710:intron 5.0%
! GGTTGGTTGGTTGGTTGGTT+GGG + chr3_3:41789697-41789716 None:intergenic 50.0%
! AGGTTGGTTGGTTGGTTGGT+TGG + chr3_3:41789698-41789717 None:intergenic 50.0%
! GGTGAACAAGGTTGGTTGGT+TGG + chr3_3:41789706-41789725 None:intergenic 50.0%
GGAGTGAGATCTGGTGAACA+AGG + chr3_3:41789718-41789737 None:intergenic 50.0%
TTCACCAGATCTCACTCCGT+TGG - chr3_3:41789720-41789739 Msa0452710:three_prime_UTR 50.0%
GAAACCAACGGAGTGAGATC+TGG + chr3_3:41789727-41789746 None:intergenic 50.0%
! GCACCTTTGATCAGAGGTGT+CGG - chr3_3:41790311-41790330 Msa0452710:CDS 50.0%
CTAGCTCCTTTCTGTCACTC+AGG + chr3_3:41790598-41790617 None:intergenic 50.0%
GGAGCTAGAAGTTGTGGTTC+TGG - chr3_3:41790610-41790629 Msa0452710:intron 50.0%
CTCCCCTGTCTACAATAGGA+GGG + chr3_3:41790761-41790780 None:intergenic 50.0%
TCTCCCCTGTCTACAATAGG+AGG + chr3_3:41790762-41790781 None:intergenic 50.0%
TGGAGGCCAAGTCTCCAATT+TGG + chr3_3:41791595-41791614 None:intergenic 50.0%
AATGCGACCACTGCAAAAGG+AGG + chr3_3:41791873-41791892 None:intergenic 50.0%
GAGGGAAAGATACTCGGACT+AGG - chr3_3:41792519-41792538 Msa0452710:intron 50.0%
! TGGACTTTTCACCCTTGGTC+TGG - chr3_3:41793133-41793152 Msa0452710:intron 50.0%
! GGACTTTTCACCCTTGGTCT+GGG - chr3_3:41793134-41793153 Msa0452710:intron 50.0%
GTCGGAACAAAACTGGGACA+TGG + chr3_3:41793346-41793365 None:intergenic 50.0%
GCGTCAGACAAGCATGACAA+CGG + chr3_3:41793512-41793531 None:intergenic 50.0%
GTTACCGCGCTCTTAAATGC+TGG - chr3_3:41794186-41794205 Msa0452710:intron 50.0%
AAGGCCAGCATTTAAGAGCG+CGG + chr3_3:41794193-41794212 None:intergenic 50.0%
! TATGCCGTCTGTGTTGACAC+TGG - chr3_3:41794578-41794597 Msa0452710:intron 50.0%
GTTGTGTACAGTTGAGCCCA+TGG + chr3_3:41794891-41794910 None:intergenic 50.0%
! GTACCCAACCTGTTGATGAG+TGG - chr3_3:41794940-41794959 Msa0452710:intron 50.0%
CAACCCACTCATCAACAGGT+TGG + chr3_3:41794947-41794966 None:intergenic 50.0%
! CAACCTGTTGATGAGTGGGT+TGG - chr3_3:41794945-41794964 Msa0452710:intron 50.0%
ATCAAAGCAGTGGATGGGAC+TGG + chr3_3:41795003-41795022 None:intergenic 50.0%
CTGCTCATCAAAGCAGTGGA+TGG + chr3_3:41795009-41795028 None:intergenic 50.0%
!! ACTAGAGGTGTCTGTGGGTT+AGG + chr3_3:41795059-41795078 None:intergenic 50.0%
CCGTGCGTTCAAAGTCGAAT+TGG - chr3_3:41795713-41795732 Msa0452710:intron 50.0%
TTGCGACAACATCCACGGAT+GGG - chr3_3:41796163-41796182 Msa0452710:intron 50.0%
CTTGGACATTCGGAGTCAAG+TGG - chr3_3:41796698-41796717 Msa0452710:intron 50.0%
TGATGTGGGTCCTTCTCCTT+TGG - chr3_3:41797151-41797170 Msa0452710:intron 50.0%
ACATTCTGGGCCAAAGGAGA+AGG + chr3_3:41797164-41797183 None:intergenic 50.0%
AACACGACATTCTGGGCCAA+AGG + chr3_3:41797170-41797189 None:intergenic 50.0%
CATCACGGAGAGGCAAATCA+CGG + chr3_3:41797193-41797212 None:intergenic 50.0%
! TGATTTGCCTCTCCGTGATG+TGG - chr3_3:41797193-41797212 Msa0452710:intron 50.0%
GATTTGCCTCTCCGTGATGT+GGG - chr3_3:41797194-41797213 Msa0452710:intron 50.0%
GAGCGGAAGACAGTATCATC+TGG - chr3_3:41797588-41797607 Msa0452710:intron 50.0%
TGGCCAATCCAAGTATGGTG+TGG - chr3_3:41798827-41798846 Msa0452710:intron 50.0%
GGCCAATCCAAGTATGGTGT+GGG - chr3_3:41798828-41798847 Msa0452710:intron 50.0%
GCAACTAGCCGAAATTGGCA+AGG + chr3_3:41799175-41799194 None:intergenic 50.0%
!! CACATGTGTCGGTGTCGTGT+TGG - chr3_3:41790279-41790298 Msa0452710:intron 55.0%
! GCACCGACACCTCTGATCAA+AGG + chr3_3:41790317-41790336 None:intergenic 55.0%
CAGGGGAGAAGAAAAGGCCT+TGG - chr3_3:41790773-41790792 Msa0452710:intron 55.0%
TGCTTGCGTCTCGGCCTTTA+TGG - chr3_3:41792402-41792421 Msa0452710:intron 55.0%
GGGTTTACCAGCTCGACTGT+CGG - chr3_3:41792570-41792589 Msa0452710:intron 55.0%
ACACAGGCACTCACGAGTTC+CGG + chr3_3:41793101-41793120 None:intergenic 55.0%
GCAACAGTCACCCAGACCAA+GGG + chr3_3:41793147-41793166 None:intergenic 55.0%
GAGCAGCACGGTTTAGCCTA+AGG + chr3_3:41793284-41793303 None:intergenic 55.0%
CTGGGGTTTGATCCTCTACC+AGG - chr3_3:41793608-41793627 Msa0452710:intron 55.0%
! GGGCAAAATTGGCCTGGTAG+AGG + chr3_3:41793623-41793642 None:intergenic 55.0%
! GCGCTCTTAAATGCTGGCCT+TGG - chr3_3:41794192-41794211 Msa0452710:intron 55.0%
! GTTTGCTAACCCACCTGCAG+AGG + chr3_3:41795155-41795174 None:intergenic 55.0%
CTTGCGACAACATCCACGGA+TGG - chr3_3:41796162-41796181 Msa0452710:intron 55.0%
TACTCTGCACTTCCCATCCG+TGG + chr3_3:41796178-41796197 None:intergenic 55.0%
GGAGTCAAGTGGTCACCAAG+TGG - chr3_3:41796709-41796728 Msa0452710:intron 55.0%
GTGGATGCTGACCCACATCA+CGG + chr3_3:41797208-41797227 None:intergenic 55.0%
CACTCACGAGTTCCGGTCGT+GGG + chr3_3:41793094-41793113 None:intergenic 60.0%
GGCAACAGTCACCCAGACCA+AGG + chr3_3:41793148-41793167 None:intergenic 60.0%
TGCTGACCCACATCACGGAG+AGG + chr3_3:41797203-41797222 None:intergenic 60.0%
TGGCCCATGCCCGATCAATG+CGG - chr3_3:41797444-41797463 Msa0452710:intron 60.0%
! CAGCCGCATTGATCGGGCAT+GGG + chr3_3:41797450-41797469 None:intergenic 60.0%
CATGCCCGATCAATGCGGCT+GGG - chr3_3:41797449-41797468 Msa0452710:intron 60.0%
! TTGGCCCAGCCGCATTGATC+GGG + chr3_3:41797456-41797475 None:intergenic 60.0%
! GTTGGCCCAGCCGCATTGAT+CGG + chr3_3:41797457-41797476 None:intergenic 60.0%
!! AGCAGCACCGACAGTCGAGC+TGG + chr3_3:41792580-41792599 None:intergenic 65.0%
!! AGCTCGACTGTCGGTGCTGC+TGG - chr3_3:41792579-41792598 Msa0452710:intron 65.0%
!! GCTCGACTGTCGGTGCTGCT+GGG - chr3_3:41792580-41792599 Msa0452710:intron 65.0%
!! CTCGACTGTCGGTGCTGCTG+GGG - chr3_3:41792581-41792600 Msa0452710:intron 65.0%
GGATTGAAGGGGGGTCGCCA+AGG + chr3_3:41792653-41792672 None:intergenic 65.0%
GCACTCACGAGTTCCGGTCG+TGG + chr3_3:41793095-41793114 None:intergenic 65.0%
! CCAGCCGCATTGATCGGGCA+TGG + chr3_3:41797451-41797470 None:intergenic 65.0%
CCATGCCCGATCAATGCGGC+TGG - chr3_3:41797448-41797467 Msa0452710:intron 65.0%
!! CTGTCGGTGCTGCTGGGGCC+TGG - chr3_3:41792586-41792605 Msa0452710:intron 75.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 41789570 41799623 41789570 ID=Msa0452710;Name=Msa0452710
chr3_3 mRNA 41789570 41799623 41789570 ID=Msa0452710-mRNA-1;Parent=Msa0452710;Name=Msa0452710-mRNA-1;_AED=0.16;_eAED=0.16;_QI=161|1|1|1|0.87|0.76|17|316|375
chr3_3 exon 41789570 41789877 41789570 ID=Msa0452710-mRNA-1:exon:7646;Parent=Msa0452710-mRNA-1
chr3_3 exon 41789898 41789967 41789898 ID=Msa0452710-mRNA-1:exon:7645;Parent=Msa0452710-mRNA-1
chr3_3 exon 41790080 41790135 41790080 ID=Msa0452710-mRNA-1:exon:7644;Parent=Msa0452710-mRNA-1
chr3_3 exon 41790286 41790392 41790286 ID=Msa0452710-mRNA-1:exon:7643;Parent=Msa0452710-mRNA-1
chr3_3 exon 41791564 41791627 41791564 ID=Msa0452710-mRNA-1:exon:7642;Parent=Msa0452710-mRNA-1
chr3_3 exon 41791787 41791872 41791787 ID=Msa0452710-mRNA-1:exon:7641;Parent=Msa0452710-mRNA-1
chr3_3 exon 41791982 41792070 41791982 ID=Msa0452710-mRNA-1:exon:7640;Parent=Msa0452710-mRNA-1
chr3_3 exon 41792442 41792523 41792442 ID=Msa0452710-mRNA-1:exon:7639;Parent=Msa0452710-mRNA-1
chr3_3 exon 41792832 41792871 41792832 ID=Msa0452710-mRNA-1:exon:7638;Parent=Msa0452710-mRNA-1
chr3_3 exon 41792964 41793037 41792964 ID=Msa0452710-mRNA-1:exon:7637;Parent=Msa0452710-mRNA-1
chr3_3 exon 41793963 41794032 41793963 ID=Msa0452710-mRNA-1:exon:7636;Parent=Msa0452710-mRNA-1
chr3_3 exon 41795269 41795338 41795269 ID=Msa0452710-mRNA-1:exon:7635;Parent=Msa0452710-mRNA-1
chr3_3 exon 41795866 41795960 41795866 ID=Msa0452710-mRNA-1:exon:7634;Parent=Msa0452710-mRNA-1
chr3_3 exon 41796087 41796163 41796087 ID=Msa0452710-mRNA-1:exon:7633;Parent=Msa0452710-mRNA-1
chr3_3 exon 41797225 41797310 41797225 ID=Msa0452710-mRNA-1:exon:7632;Parent=Msa0452710-mRNA-1
chr3_3 exon 41799361 41799543 41799361 ID=Msa0452710-mRNA-1:exon:7631;Parent=Msa0452710-mRNA-1
chr3_3 exon 41799576 41799623 41799576 ID=Msa0452710-mRNA-1:exon:7630;Parent=Msa0452710-mRNA-1
chr3_3 five_prime_UTR 41799576 41799623 41799576 ID=Msa0452710-mRNA-1:five_prime_utr;Parent=Msa0452710-mRNA-1
chr3_3 five_prime_UTR 41799431 41799543 41799431 ID=Msa0452710-mRNA-1:five_prime_utr;Parent=Msa0452710-mRNA-1
chr3_3 CDS 41799361 41799430 41799361 ID=Msa0452710-mRNA-1:cds;Parent=Msa0452710-mRNA-1
chr3_3 CDS 41797225 41797310 41797225 ID=Msa0452710-mRNA-1:cds;Parent=Msa0452710-mRNA-1
chr3_3 CDS 41796087 41796163 41796087 ID=Msa0452710-mRNA-1:cds;Parent=Msa0452710-mRNA-1
chr3_3 CDS 41795866 41795960 41795866 ID=Msa0452710-mRNA-1:cds;Parent=Msa0452710-mRNA-1
chr3_3 CDS 41795269 41795338 41795269 ID=Msa0452710-mRNA-1:cds;Parent=Msa0452710-mRNA-1
chr3_3 CDS 41793963 41794032 41793963 ID=Msa0452710-mRNA-1:cds;Parent=Msa0452710-mRNA-1
chr3_3 CDS 41792964 41793037 41792964 ID=Msa0452710-mRNA-1:cds;Parent=Msa0452710-mRNA-1
chr3_3 CDS 41792832 41792871 41792832 ID=Msa0452710-mRNA-1:cds;Parent=Msa0452710-mRNA-1
chr3_3 CDS 41792442 41792523 41792442 ID=Msa0452710-mRNA-1:cds;Parent=Msa0452710-mRNA-1
chr3_3 CDS 41791982 41792070 41791982 ID=Msa0452710-mRNA-1:cds;Parent=Msa0452710-mRNA-1
chr3_3 CDS 41791787 41791872 41791787 ID=Msa0452710-mRNA-1:cds;Parent=Msa0452710-mRNA-1
chr3_3 CDS 41791564 41791627 41791564 ID=Msa0452710-mRNA-1:cds;Parent=Msa0452710-mRNA-1
chr3_3 CDS 41790286 41790392 41790286 ID=Msa0452710-mRNA-1:cds;Parent=Msa0452710-mRNA-1
chr3_3 CDS 41790080 41790135 41790080 ID=Msa0452710-mRNA-1:cds;Parent=Msa0452710-mRNA-1
chr3_3 CDS 41789906 41789967 41789906 ID=Msa0452710-mRNA-1:cds;Parent=Msa0452710-mRNA-1
chr3_3 three_prime_UTR 41789898 41789905 41789898 ID=Msa0452710-mRNA-1:three_prime_utr;Parent=Msa0452710-mRNA-1
chr3_3 three_prime_UTR 41789570 41789877 41789570 ID=Msa0452710-mRNA-1:three_prime_utr;Parent=Msa0452710-mRNA-1
Gene Sequence

>Msa0452710

ATGGCGGTGATGTCTGTTCATCAATTCGCTCAATGCATCACTTGTCACGCTTGGAGTCCCGATCAATCTATGGTCGCATTTTGTCCAAACAATAATGAAGTTCACATCTATAGATTGGTCGAAGACAAATGGGAAAAGGTGCATGTTCTTCAAAAGCATGATCAGGTAATATCTGGGATAGACTGGAGTGCAAGATCAAATAGAATAGTTACTTCATCCCACGACCGGAACTCATATGTCTGGAACCTTGAAGGATCAGAATGGGTACCAACTCTTGTTATCCTTAGGCTAAACCGTGCTGCTCTTTGTGTTCAATGGAGTCCAAAAGAAAACAAGTTTGCAGTGGGAAGTGGTGCCAAAACTGTTTGTATATGCTATTATGAGCAGGAAAACAACTGGTGGGTTAGCAAACTTATCAGAAAAAGACACGATTCTTCAGTGACAAGTGTTTCATGGCATCCCGATAATATTCTTCTTGCGACAACATCCACGGATGGGAAGTGCAGAGTATTTTCCACCTTTATAAAAGGTGTAGATGCAAAGGATTCAAAAAAGAGTACATCTGATATGAAATTTGGAGAGTTGATTGTTCAGCTTGATCTCTCATCATCTTGGACATTCGGAGTCAAGTGGTCACCAAGTGGCAATACCCTAGCTTATGTAGGTCATAATTCAATGATATATTTTGTTGATGATGTGGGTCCTTCTCCTTTGGCCCAGAATGTCGTGTTCCGTGATTTGCCTCTCCGTGATGTATTATTTGTTTCTGAGAGAACGGTAATAGGTGTGGGATATGATTGTAACCCAATGGTTTTTGCTGCAGATGAAAGAGGAGTTTGGGGTTTTGTCAGGTATCTTGGAGAGCGGAAGACAGTATCATCTGGATCAAGATATGGCTCACAGTTCTCTGAAGCATTTGGGAAGTTTTATGGCCAATCCAAGTATGGTGTGGGAAACGATGCTGTTGAAACTTCAAAAACACGTGGATCAGTTCATGATAACTGTATAAATTCTATCATACCTCTTGGTGAGCATGGAACATTGACAAGGCGTTTTAGCACATCAGGATTGGATGGAAGAATTGCTGTATGGGATTTGGAAAATGAGCAGGACCTTCTTGAATTATAA

Protein sequence

>Msa0452710

MAVMSVHQFAQCITCHAWSPDQSMVAFCPNNNEVHIYRLVEDKWEKVHVLQKHDQVISGIDWSARSNRIVTSSHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVSWHPDNILLATTSTDGKCRVFSTFIKGVDAKDSKKSTSDMKFGELIVQLDLSSSWTFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQNVVFRDLPLRDVLFVSERTVIGVGYDCNPMVFAADERGVWGFVRYLGERKTVSSGSRYGSQFSEAFGKFYGQSKYGVGNDAVETSKTRGSVHDNCINSIIPLGEHGTLTRRFSTSGLDGRIAVWDLENEQDLLEL*