AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1340910

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1340910 MtrunA17_Chr1g0208391 97.928 724 14 1 1 724 1 723 0.0 1458
Msa1340910 MtrunA17_Chr1g0198931 30.583 618 376 15 46 629 42 640 1.69e-85 284
Msa1340910 MtrunA17_Chr4g0039261 31.040 596 373 13 47 616 4 587 2.19e-83 278
Msa1340910 MtrunA17_Chr8g0359931 30.293 581 375 12 53 624 23 582 2.15e-82 274
Msa1340910 MtrunA17_Chr5g0408061 29.848 593 370 12 53 624 27 594 6.35e-81 270
Msa1340910 MtrunA17_Chr1g0176441 30.182 603 370 15 29 594 98 686 5.60e-79 268
Msa1340910 MtrunA17_Chr4g0050221 30.533 619 394 14 67 665 6 608 1.01e-78 264
Msa1340910 MtrunA17_Chr1g0200651 32.523 535 341 10 79 602 75 600 2.18e-78 264
Msa1340910 MtrunA17_Chr4g0039251 31.317 562 352 10 76 613 75 626 3.68e-78 265
Msa1340910 MtrunA17_Chr1g0176451 31.461 534 330 13 83 594 12 531 6.23e-78 261
Msa1340910 MtrunA17_Chr4g0050291 30.441 657 412 17 67 692 21 663 8.45e-76 257
Msa1340910 MtrunA17_Chr6g0477811 30.849 577 361 13 63 615 37 599 1.37e-75 258
Msa1340910 MtrunA17_Chr7g0267971 30.972 607 366 18 25 594 85 675 1.57e-75 258
Msa1340910 MtrunA17_Chr4g0050251 28.732 623 405 13 68 664 47 656 1.65e-69 241
Msa1340910 MtrunA17_Chr4g0050261 28.708 627 378 15 68 640 47 658 4.82e-67 235
Msa1340910 MtrunA17_Chr3g0102731 29.623 530 341 9 67 578 72 587 6.64e-64 223
Msa1340910 MtrunA17_Chr8g0384391 27.517 596 403 11 58 633 20 606 8.16e-64 224
Msa1340910 MtrunA17_Chr5g0446901 30.410 536 336 8 66 578 81 602 1.24e-63 223
Msa1340910 MtrunA17_Chr7g0262241 29.068 547 359 9 94 628 880 1409 1.29e-63 231
Msa1340910 MtrunA17_Chr7g0262241 25.350 572 361 13 94 614 162 718 2.56e-42 166
Msa1340910 MtrunA17_Chr1g0213091 27.719 570 370 10 82 614 110 674 1.98e-63 225
Msa1340910 MtrunA17_Chr2g0331081 28.090 534 345 10 94 608 891 1404 3.20e-61 223
Msa1340910 MtrunA17_Chr2g0331081 25.177 564 356 13 94 606 179 727 1.43e-33 139
Msa1340910 MtrunA17_Chr7g0263351 27.323 538 360 8 92 607 125 653 8.72e-61 218
Msa1340910 MtrunA17_Chr7g0261971 29.359 562 351 14 94 633 875 1412 1.27e-59 219
Msa1340910 MtrunA17_Chr7g0261971 25.789 570 361 14 94 614 158 714 1.83e-39 157
Msa1340910 MtrunA17_Chr8g0340651 27.458 539 346 9 94 610 905 1420 1.43e-59 218
Msa1340910 MtrunA17_Chr8g0340651 24.869 571 371 12 94 617 178 737 2.51e-36 147
Msa1340910 MtrunA17_Chr1g0171351 27.837 564 357 13 71 606 864 1405 2.66e-59 218
Msa1340910 MtrunA17_Chr1g0171351 26.178 573 351 16 89 607 171 725 3.20e-36 147
Msa1340910 MtrunA17_Chr2g0332221 26.961 612 381 15 42 607 776 1367 8.09e-59 216
Msa1340910 MtrunA17_Chr2g0332221 25.355 564 361 12 94 609 167 718 1.98e-37 150
Msa1340910 MtrunA17_Chr2g0332241 27.229 617 382 16 37 607 773 1368 8.88e-59 216
Msa1340910 MtrunA17_Chr2g0332241 25.383 587 375 14 94 632 167 738 4.87e-38 152
Msa1340910 MtrunA17_Chr2g0318061 36.875 320 183 6 92 404 29 336 9.53e-59 203
Msa1340910 MtrunA17_Chr2g0316301 28.288 555 353 13 92 632 71 594 1.22e-58 209
Msa1340910 MtrunA17_Chr2g0332211 28.545 536 338 11 94 607 939 1451 6.64e-58 213
Msa1340910 MtrunA17_Chr2g0332211 34.767 279 137 8 94 334 248 519 9.39e-36 145
Msa1340910 MtrunA17_Chr7g0265991 27.478 575 356 11 71 606 29 581 2.34e-57 206
Msa1340910 MtrunA17_Chr4g0039231 27.190 548 323 10 137 613 1 543 3.45e-57 206
Msa1340910 MtrunA17_Chr3g0104621 26.700 603 384 15 42 607 701 1282 4.90e-57 211
Msa1340910 MtrunA17_Chr3g0104621 23.792 559 371 13 94 607 56 604 3.27e-29 125
Msa1340910 MtrunA17_Chr4g0003981 27.715 534 345 10 94 607 866 1378 1.27e-56 209
Msa1340910 MtrunA17_Chr4g0003981 33.217 286 146 8 87 334 166 444 1.38e-35 145
Msa1340910 MtrunA17_Chr7g0262231 27.617 554 371 11 94 633 883 1420 3.62e-56 208
Msa1340910 MtrunA17_Chr7g0262231 25.217 575 358 14 94 614 162 718 6.10e-43 168
Msa1340910 MtrunA17_Chr7g0261951 27.667 553 372 8 94 633 879 1416 1.15e-55 207
Msa1340910 MtrunA17_Chr7g0261951 25.391 575 357 14 94 614 162 718 5.57e-38 152
Msa1340910 MtrunA17_Chr7g0262221 27.385 566 355 14 94 628 854 1394 4.73e-55 205
Msa1340910 MtrunA17_Chr7g0262221 26.834 518 325 16 94 575 163 662 1.97e-39 157
Msa1340910 MtrunA17_Chr4g0050201 28.409 528 352 12 156 667 22 539 7.91e-55 197
Msa1340910 MtrunA17_Chr1g0198291 29.735 528 340 12 94 606 894 1405 8.95e-55 204
Msa1340910 MtrunA17_Chr1g0198291 35.336 283 144 8 87 334 182 460 2.69e-34 141
Msa1340910 MtrunA17_Chr7g0265981 28.090 534 341 10 94 606 883 1394 1.79e-54 203
Msa1340910 MtrunA17_Chr7g0265981 27.013 559 354 15 94 607 184 733 7.97e-38 152
Msa1340910 MtrunA17_Chr3g0138261 27.179 585 371 14 55 607 821 1382 2.60e-54 202
Msa1340910 MtrunA17_Chr3g0138261 26.723 595 355 18 77 614 152 722 1.12e-39 158
Msa1340910 MtrunA17_Chr7g0262261 27.156 545 346 10 94 607 803 1327 3.61e-54 202
Msa1340910 MtrunA17_Chr7g0262261 25.394 571 362 13 94 614 133 689 5.02e-39 156
Msa1340910 MtrunA17_Chr7g0265971 27.106 546 345 9 94 606 875 1400 2.10e-53 200
Msa1340910 MtrunA17_Chr7g0265971 26.998 563 349 16 94 607 178 727 5.21e-41 162
Msa1340910 MtrunA17_Chr1g0148841 28.166 529 349 11 94 607 877 1389 1.01e-52 197
Msa1340910 MtrunA17_Chr1g0148841 27.759 580 341 18 87 609 159 717 1.17e-39 157
Msa1340910 MtrunA17_Chr5g0429871 25.738 610 380 13 44 606 595 1178 1.16e-52 197
Msa1340910 MtrunA17_Chr5g0429871 21.053 608 394 15 156 706 40 618 4.47e-21 99.0
Msa1340910 MtrunA17_Chr4g0003971 27.715 534 345 10 94 607 825 1337 1.29e-52 197
Msa1340910 MtrunA17_Chr4g0003971 26.353 573 344 19 94 609 161 712 4.42e-39 156
Msa1340910 MtrunA17_Chr4g0062871 27.087 539 342 10 94 607 844 1356 2.83e-52 196
Msa1340910 MtrunA17_Chr4g0062871 25.705 603 385 16 94 652 150 733 1.73e-36 148
Msa1340910 MtrunA17_Chr1g0202431 27.544 570 359 14 63 610 9 546 4.19e-52 191
Msa1340910 MtrunA17_Chr1g0148811 26.623 616 388 16 48 630 798 1382 8.18e-52 195
Msa1340910 MtrunA17_Chr1g0148811 27.431 576 348 17 87 609 147 705 6.73e-33 136
Msa1340910 MtrunA17_Chr7g0262251 26.412 549 347 12 94 607 827 1353 1.29e-51 194
Msa1340910 MtrunA17_Chr7g0262251 29.603 554 342 16 94 614 175 713 2.81e-48 184
Msa1340910 MtrunA17_Chr4g0026731 27.190 548 348 13 124 630 9 546 1.61e-51 189
Msa1340910 MtrunA17_Chr0c20g0493841 25.261 574 392 11 57 607 811 1370 9.44e-51 192
Msa1340910 MtrunA17_Chr0c20g0493841 26.290 620 375 16 71 628 138 737 3.34e-44 172
Msa1340910 MtrunA17_Chr3g0130331 26.549 565 390 11 91 638 55 611 1.67e-50 187
Msa1340910 MtrunA17_Chr4g0065231 25.800 531 350 9 94 607 75 578 4.33e-50 186
Msa1340910 MtrunA17_Chr7g0261981 27.355 552 336 16 94 628 861 1364 9.56e-48 182
Msa1340910 MtrunA17_Chr7g0261981 24.386 570 369 13 94 614 162 718 1.78e-38 154
Msa1340910 MtrunA17_Chr7g0262321 27.799 536 345 16 94 614 568 1076 2.63e-47 181
Msa1340910 MtrunA17_Chr7g0262321 24.675 462 296 16 183 614 9 448 3.55e-21 99.4
Msa1340910 MtrunA17_Chr7g0265961 26.257 537 330 11 94 606 831 1325 2.72e-46 178
Msa1340910 MtrunA17_Chr7g0265961 25.581 559 348 15 87 593 175 717 3.94e-35 144
Msa1340910 MtrunA17_Chr8g0393191 37.918 269 155 4 74 334 43 307 1.29e-45 175
Msa1340910 MtrunA17_Chr8g0393191 23.636 220 165 1 389 608 518 734 1.41e-12 71.2
Msa1340910 MtrunA17_Chr4g0004021 29.976 417 265 9 94 497 863 1265 6.23e-45 174
Msa1340910 MtrunA17_Chr4g0004021 32.867 286 147 8 87 334 164 442 4.63e-36 146
Msa1340910 MtrunA17_Chr5g0411621 37.302 252 150 5 94 343 51 296 1.18e-40 159
Msa1340910 MtrunA17_Chr7g0264441 36.090 266 159 5 71 333 260 517 1.88e-40 159
Msa1340910 MtrunA17_Chr1g0199471 35.510 245 151 4 92 333 515 755 5.57e-40 158
Msa1340910 MtrunA17_Chr1g0180971 35.102 245 152 4 92 333 411 651 5.32e-38 151
Msa1340910 MtrunA17_Chr7g0266001 25.714 560 360 14 94 607 63 612 1.46e-37 149
Msa1340910 MtrunA17_Chr4g0069211 25.161 620 370 18 71 628 138 725 2.81e-37 150
Msa1340910 MtrunA17_Chr4g0069211 31.048 248 156 4 55 290 797 1041 2.43e-27 119
Msa1340910 MtrunA17_Chr2g0327241 25.641 585 411 12 42 612 77 651 8.72e-36 144
Msa1340910 MtrunA17_Chr4g0028621 35.510 245 151 4 92 333 505 745 9.37e-35 142
Msa1340910 MtrunA17_Chr6g0472481 32.911 237 141 3 94 315 13 246 1.20e-32 127
Msa1340910 MtrunA17_Chr3g0093331 34.156 243 135 7 114 343 18 248 2.21e-29 117
Msa1340910 MtrunA17_Chr7g0215001 25.000 384 232 11 244 588 2 368 9.54e-26 109
Msa1340910 MtrunA17_Chr2g0318071 25.397 189 134 2 442 630 14 195 2.47e-16 79.3
Msa1340910 MtrunA17_Chr6g0463151 30.000 240 145 8 88 326 449 666 3.16e-16 83.6
Msa1340910 MtrunA17_Chr6g0472531 29.075 227 139 7 78 303 572 777 1.02e-15 81.6
Msa1340910 MtrunA17_Chr4g0047831 45.455 77 42 0 219 295 8 84 1.44e-15 72.8
Msa1340910 MtrunA17_Chr6g0471281 28.112 249 142 9 95 342 639 851 1.46e-15 81.3
Msa1340910 MtrunA17_Chr4g0069221 22.897 214 162 1 397 607 102 315 1.87e-15 79.0
Msa1340910 MtrunA17_Chr6g0463121 28.708 209 127 7 95 302 638 825 2.15e-14 77.4
Msa1340910 MtrunA17_Chr6g0463131 28.464 267 160 10 95 352 639 883 3.01e-14 77.0
Msa1340910 MtrunA17_Chr8g0390481 52.727 55 26 0 225 279 8 62 2.96e-13 65.5
Msa1340910 MtrunA17_Chr6g0463181 27.801 241 140 9 76 303 594 813 4.09e-13 73.6
Msa1340910 MtrunA17_Chr4g0061601 26.872 227 136 10 88 302 398 606 1.06e-12 71.6
Msa1340910 MtrunA17_Chr6g0463141 26.695 236 125 9 95 303 637 851 2.01e-12 71.2
Msa1340910 MtrunA17_Chr6g0452171 29.493 217 134 8 93 302 1036 1240 3.24e-12 70.5
Msa1340910 MtrunA17_Chr3g0123411 29.167 216 136 9 92 302 920 1123 3.28e-12 70.5
Msa1340910 MtrunA17_Chr7g0249091 26.609 233 134 7 94 302 100 319 4.48e-12 68.2
Msa1340910 MtrunA17_Chr3g0093091 27.650 217 136 7 92 302 635 836 5.26e-12 69.7
Msa1340910 MtrunA17_Chr4g0060431 28.571 210 117 7 105 302 628 816 1.22e-11 68.6
Msa1340910 MtrunA17_Chr6g0452061 28.571 217 136 8 93 302 545 749 1.65e-11 67.8
Msa1340910 MtrunA17_Chr8g0344651 26.000 250 165 9 58 302 1226 1460 1.81e-11 68.2
Msa1340910 MtrunA17_Chr4g0039221 43.284 67 38 0 72 138 7 73 2.04e-11 60.5
Msa1340910 MtrunA17_Chr7g0257341 21.864 279 204 5 50 327 1434 1699 2.25e-11 67.8
Msa1340910 MtrunA17_Chr6g0451881 28.821 229 135 9 93 305 1023 1239 4.08e-11 67.0
Msa1340910 MtrunA17_Chr6g0452111 28.571 217 136 8 93 302 1034 1238 5.85e-11 66.2
Msa1340910 MtrunA17_Chr6g0463201 26.761 213 134 7 95 306 643 834 6.22e-11 66.2
Msa1340910 MtrunA17_Chr6g0452041 27.803 223 130 10 93 302 1035 1239 8.82e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1340910 AT2G01320.1 75.966 699 152 5 35 725 35 725 0.0 1081
Msa1340910 AT2G01320.4 75.966 699 152 5 35 725 35 725 0.0 1081
Msa1340910 AT2G01320.2 75.931 698 152 5 35 724 35 724 0.0 1079
Msa1340910 AT2G01320.3 75.897 697 152 5 35 723 35 723 0.0 1078
Msa1340910 AT2G01320.8 80.880 591 109 1 35 625 35 621 0.0 996
Msa1340910 AT2G01320.5 80.880 591 109 1 35 625 35 621 0.0 996
Msa1340910 AT2G01320.7 79.472 492 97 1 35 526 35 522 0.0 806
Msa1340910 AT2G01320.6 79.472 492 97 1 35 526 35 522 0.0 806
Msa1340910 AT3G25620.2 31.826 619 370 17 37 623 30 628 2.42e-92 302
Msa1340910 AT3G21090.1 31.336 584 363 11 76 633 27 598 3.68e-85 283
Msa1340910 AT1G51500.1 29.276 649 414 14 56 670 5 642 3.91e-83 278
Msa1340910 AT1G31770.1 31.986 569 354 11 71 623 50 601 4.53e-83 277
Msa1340910 AT4G27420.1 32.428 552 348 11 71 607 34 575 6.05e-83 276
Msa1340910 AT5G06530.2 30.498 623 377 16 37 614 110 721 1.30e-78 267
Msa1340910 AT5G06530.1 30.498 623 377 16 37 614 110 721 1.30e-78 267
Msa1340910 AT5G06530.3 31.434 579 352 13 37 578 110 680 7.77e-77 261
Msa1340910 AT1G51460.1 31.724 580 340 13 74 613 10 573 1.03e-76 260
Msa1340910 AT1G71960.1 31.707 533 345 11 84 607 72 594 1.41e-74 254
Msa1340910 AT1G17840.1 30.570 579 369 11 74 630 50 617 2.96e-72 249
Msa1340910 AT3G55100.1 29.094 574 377 11 52 607 5 566 5.87e-72 247
Msa1340910 AT3G55100.2 29.094 574 377 11 52 607 5 566 5.87e-72 247
Msa1340910 AT5G06530.4 32.657 493 299 10 111 578 1 485 1.06e-71 242
Msa1340910 AT3G55110.1 27.915 566 382 7 63 607 52 612 9.61e-69 239
Msa1340910 AT3G55090.1 28.526 624 378 12 46 614 46 656 1.92e-68 239
Msa1340910 AT3G13220.1 31.298 524 338 10 92 602 104 618 6.77e-67 234
Msa1340910 AT2G37360.1 28.076 577 365 13 75 614 112 675 2.60e-64 228
Msa1340910 AT3G25620.1 33.411 431 244 14 37 435 30 449 2.94e-64 221
Msa1340910 AT2G39350.1 28.673 565 346 12 94 614 109 660 3.76e-63 224
Msa1340910 AT3G55130.1 28.473 583 375 10 68 613 67 644 1.21e-62 223
Msa1340910 AT5G13580.1 28.468 555 360 9 88 614 102 647 3.72e-62 221
Msa1340910 AT3G16340.2 27.598 587 375 12 47 607 786 1348 8.71e-62 225
Msa1340910 AT3G16340.2 25.976 589 347 18 94 622 162 721 9.30e-36 146
Msa1340910 AT3G16340.1 27.598 587 375 12 47 607 791 1353 9.68e-62 225
Msa1340910 AT3G16340.1 25.976 589 352 17 94 622 162 726 2.16e-37 151
Msa1340910 AT3G53510.1 28.755 546 360 9 90 614 122 659 5.77e-61 218
Msa1340910 AT1G59870.1 27.660 564 362 13 70 607 863 1406 8.36e-61 223
Msa1340910 AT1G59870.1 27.544 570 335 16 94 606 186 734 1.57e-36 148
Msa1340910 AT2G13610.1 27.467 608 386 13 83 658 51 635 1.18e-60 216
Msa1340910 AT1G15210.1 26.500 600 386 15 43 607 800 1379 1.63e-59 219
Msa1340910 AT1G15210.1 27.130 575 333 19 94 607 184 733 1.22e-37 152
Msa1340910 AT3G53480.1 28.272 573 345 15 71 607 847 1389 4.14e-59 218
Msa1340910 AT3G53480.1 26.190 630 383 17 60 628 150 758 1.32e-42 167
Msa1340910 AT4G15230.3 28.723 564 360 16 66 607 796 1339 6.27e-59 217
Msa1340910 AT4G15230.3 26.395 663 421 20 71 679 130 779 1.44e-48 186
Msa1340910 AT4G15230.1 28.723 564 360 16 66 607 796 1339 6.27e-59 217
Msa1340910 AT4G15230.1 26.395 663 421 20 71 679 130 779 1.44e-48 186
Msa1340910 AT4G15230.4 28.723 564 360 16 66 607 717 1260 9.05e-59 216
Msa1340910 AT4G15230.4 26.395 663 421 20 71 679 51 700 2.16e-48 185
Msa1340910 AT5G19410.1 27.176 563 354 14 94 636 66 592 1.81e-58 209
Msa1340910 AT5G19410.2 27.176 563 354 14 94 636 75 601 2.91e-58 209
Msa1340910 AT1G66950.1 27.534 592 357 15 54 606 833 1391 8.64e-57 211
Msa1340910 AT1G66950.1 25.668 561 359 13 94 607 190 739 5.03e-38 153
Msa1340910 AT2G37280.4 29.000 600 354 19 54 616 634 1198 1.31e-56 210
Msa1340910 AT2G37280.4 26.655 574 354 13 106 628 8 565 2.54e-43 169
Msa1340910 AT1G15520.1 25.882 595 388 14 46 607 790 1364 1.45e-56 210
Msa1340910 AT1G15520.1 25.932 590 357 18 94 627 169 734 3.09e-38 154
Msa1340910 AT2G37280.3 29.000 600 354 19 54 616 821 1385 1.74e-56 209
Msa1340910 AT2G37280.3 25.811 647 379 16 67 628 122 752 2.22e-43 169
Msa1340910 AT2G37280.1 29.000 600 354 19 54 616 792 1356 1.97e-56 209
Msa1340910 AT2G37280.1 26.452 620 380 15 67 628 122 723 1.28e-46 179
Msa1340910 AT4G15215.1 27.788 565 364 15 66 607 786 1329 5.29e-56 208
Msa1340910 AT4G15215.1 25.888 676 422 19 45 665 104 755 2.70e-44 172
Msa1340910 AT4G15215.11 27.788 565 364 15 66 607 793 1336 5.46e-56 208
Msa1340910 AT4G15215.11 25.444 676 432 18 45 665 104 762 1.07e-44 174
Msa1340910 AT4G15215.9 27.788 565 364 15 66 607 790 1333 5.55e-56 208
Msa1340910 AT4G15215.9 25.444 676 432 18 45 665 101 759 9.96e-45 174
Msa1340910 AT4G15215.4 27.788 565 364 15 66 607 790 1333 5.55e-56 208
Msa1340910 AT4G15215.4 25.444 676 432 18 45 665 101 759 9.96e-45 174
Msa1340910 AT4G15215.5 27.788 565 364 15 66 607 790 1333 5.55e-56 208
Msa1340910 AT4G15215.5 25.444 676 432 18 45 665 101 759 9.96e-45 174
Msa1340910 AT4G15215.3 27.788 565 364 15 66 607 790 1333 5.55e-56 208
Msa1340910 AT4G15215.3 25.444 676 432 18 45 665 101 759 9.96e-45 174
Msa1340910 AT4G15215.2 27.788 565 364 15 66 607 790 1333 5.55e-56 208
Msa1340910 AT4G15215.2 25.444 676 432 18 45 665 101 759 9.96e-45 174
Msa1340910 AT4G15215.8 27.788 565 364 15 66 607 783 1326 5.74e-56 208
Msa1340910 AT4G15215.8 25.888 676 422 19 45 665 101 752 2.90e-44 172
Msa1340910 AT4G15215.10 27.788 565 364 15 66 607 783 1326 5.74e-56 208
Msa1340910 AT4G15215.10 25.888 676 422 19 45 665 101 752 2.90e-44 172
Msa1340910 AT4G15215.6 27.788 565 364 15 66 607 783 1326 5.74e-56 208
Msa1340910 AT4G15215.6 25.888 676 422 19 45 665 101 752 2.90e-44 172
Msa1340910 AT4G15215.7 27.788 565 364 15 66 607 783 1326 5.74e-56 208
Msa1340910 AT4G15215.7 25.888 676 422 19 45 665 101 752 2.90e-44 172
Msa1340910 AT5G52860.1 27.679 560 350 13 63 610 8 524 1.67e-55 200
Msa1340910 AT3G30842.1 27.129 634 387 18 71 663 818 1417 4.24e-55 205
Msa1340910 AT3G30842.1 24.561 570 356 17 94 608 161 711 2.39e-33 138
Msa1340910 AT4G15230.2 29.213 534 336 16 66 577 796 1309 4.30e-55 205
Msa1340910 AT4G15230.2 26.395 663 421 20 71 679 130 779 1.03e-48 186
Msa1340910 AT4G15233.3 26.750 557 374 13 71 611 735 1273 4.57e-55 205
Msa1340910 AT4G15233.3 26.382 633 394 18 59 636 57 672 5.59e-42 165
Msa1340910 AT4G15233.6 26.750 557 374 13 71 611 735 1273 4.57e-55 205
Msa1340910 AT4G15233.6 26.382 633 394 18 59 636 57 672 5.59e-42 165
Msa1340910 AT4G15233.1 26.750 557 374 13 71 611 797 1335 5.11e-55 205
Msa1340910 AT4G15233.1 26.409 621 387 17 71 636 129 734 5.93e-42 165
Msa1340910 AT2G36380.1 27.915 566 371 13 64 606 839 1390 5.53e-55 205
Msa1340910 AT2G36380.1 26.549 565 349 14 94 607 188 737 4.88e-39 156
Msa1340910 AT4G15233.8 26.750 557 374 13 71 611 788 1326 5.67e-55 205
Msa1340910 AT4G15233.8 26.382 633 385 19 59 636 119 725 3.41e-38 154
Msa1340910 AT4G15233.7 26.750 557 374 13 71 611 779 1317 5.91e-55 205
Msa1340910 AT4G15233.7 26.829 615 396 17 59 636 119 716 9.03e-44 171
Msa1340910 AT4G15236.1 27.110 557 372 14 71 611 795 1333 6.72e-55 205
Msa1340910 AT4G15236.1 27.273 627 374 19 71 636 127 732 1.41e-44 173
Msa1340910 AT2G37280.2 29.768 561 327 18 54 577 792 1322 8.29e-55 204
Msa1340910 AT2G37280.2 26.452 620 380 15 67 628 122 723 1.05e-46 180
Msa1340910 AT1G53270.1 28.064 563 368 13 61 616 20 552 7.50e-54 196
Msa1340910 AT2G26910.1 26.391 557 376 11 71 607 815 1357 1.50e-53 201
Msa1340910 AT2G26910.1 28.028 578 328 19 94 609 150 701 3.02e-35 144
Msa1340910 AT4G15233.5 27.205 533 355 12 95 611 677 1192 4.85e-53 199
Msa1340910 AT4G15233.5 26.829 615 396 17 59 636 57 654 7.86e-44 171
Msa1340910 AT4G15233.4 27.205 533 355 12 95 611 677 1192 4.85e-53 199
Msa1340910 AT4G15233.4 26.829 615 396 17 59 636 57 654 7.86e-44 171
Msa1340910 AT4G25750.1 27.533 523 337 11 93 611 29 513 2.10e-52 191
Msa1340910 AT4G15233.2 26.162 581 371 14 71 611 797 1359 3.86e-52 196
Msa1340910 AT4G15233.2 26.409 621 387 17 71 636 129 734 4.68e-42 166
Msa1340910 AT2G29940.1 25.256 586 397 10 48 607 795 1365 4.22e-52 196
Msa1340910 AT2G29940.1 24.301 572 354 17 94 607 175 725 5.43e-31 131
Msa1340910 AT1G15520.2 28.603 458 281 13 71 502 822 1259 2.54e-45 176
Msa1340910 AT1G15520.2 25.932 590 357 18 94 627 169 734 2.21e-38 154
Msa1340910 AT1G53390.1 37.860 243 144 4 94 333 523 761 3.65e-42 166
Msa1340910 AT2G37010.2 35.918 245 150 4 92 333 498 738 5.77e-41 162
Msa1340910 AT2G37010.1 35.918 245 150 4 92 333 498 738 5.77e-41 162
Msa1340910 AT5G60740.1 35.102 245 152 4 92 333 513 753 7.22e-35 143
Msa1340910 AT2G28070.2 26.395 466 321 10 68 520 108 564 5.25e-33 136
Msa1340910 AT2G28070.1 26.395 466 321 10 68 520 108 564 5.25e-33 136
Msa1340910 AT3G28380.1 31.799 239 131 10 94 316 1012 1234 1.38e-15 81.6
Msa1340910 AT3G28390.1 30.734 218 130 8 93 302 996 1200 1.48e-15 81.6
Msa1340910 AT3G28345.1 30.415 217 132 7 93 302 1011 1215 1.87e-14 78.2
Msa1340910 AT3G28360.1 29.493 217 132 7 94 302 998 1201 5.39e-14 76.6
Msa1340910 AT3G47790.1 27.155 232 148 6 77 302 589 805 6.66e-14 76.3
Msa1340910 AT5G61700.2 30.058 173 114 3 105 277 626 791 2.11e-13 74.3
Msa1340910 AT5G61700.4 30.058 173 114 3 105 277 626 791 2.11e-13 74.3
Msa1340910 AT1G27940.2 32.110 218 123 9 94 302 807 1008 2.63e-13 74.3
Msa1340910 AT1G27940.2 28.037 214 139 7 93 302 173 375 1.07e-11 68.9
Msa1340910 AT1G27940.1 32.110 218 123 9 94 302 1021 1222 4.28e-13 73.6
Msa1340910 AT1G27940.1 29.767 215 134 9 93 302 387 589 1.40e-11 68.9
Msa1340910 AT1G28010.1 32.710 214 127 8 94 302 1023 1224 6.57e-13 73.2
Msa1340910 AT1G28010.1 27.876 226 148 7 81 302 376 590 4.41e-12 70.5
Msa1340910 AT3G47790.3 28.502 207 125 5 77 275 589 780 7.31e-13 72.8
Msa1340910 AT3G28415.2 29.032 217 135 7 93 302 1000 1204 7.76e-13 72.8
Msa1340910 AT3G28415.1 29.032 217 135 7 93 302 992 1196 8.08e-13 72.8
Msa1340910 AT3G47790.2 28.230 209 123 6 77 275 470 661 8.24e-13 72.4
Msa1340910 AT5G39040.1 28.879 232 140 10 88 310 407 622 9.55e-13 72.0
Msa1340910 AT5G61740.1 28.436 211 142 5 92 302 605 806 1.09e-12 72.4
Msa1340910 AT5G61740.3 28.436 211 142 5 92 302 466 667 1.19e-12 72.0
Msa1340910 AT5G61740.2 28.436 211 142 5 92 302 571 772 1.31e-12 72.0
Msa1340910 AT5G61700.1 24.739 287 187 8 32 302 541 814 3.81e-12 70.5
Msa1340910 AT4G28620.1 30.804 224 122 9 92 302 452 655 8.31e-12 69.3
Msa1340910 AT3G47730.1 28.947 190 113 6 95 277 547 721 3.36e-11 67.4
Msa1340910 AT3G47780.1 28.571 217 134 7 92 302 631 832 3.69e-11 67.4
Msa1340910 AT1G70610.1 30.275 218 130 8 94 302 472 676 3.82e-11 67.0
Msa1340910 AT4G28630.1 29.259 270 153 11 44 302 411 653 4.08e-11 67.0
Msa1340910 AT1G70610.2 31.193 218 128 9 94 302 291 495 4.28e-11 66.6
Msa1340910 AT5G58270.1 29.134 254 154 9 65 309 465 701 4.60e-11 66.6
Msa1340910 AT3G59140.1 27.885 208 128 7 95 301 620 806 6.08e-11 66.6

Find 168 sgRNAs with CRISPR-Local

Find 561 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATATACTTGTAAGCGTTTC+TGG 0.044002 tig0004652:-770 Msa1340910:intergenic
AAAATAGAATATTGTTATTT+TGG 0.124824 tig0004652:+7051 Msa1340910:CDS
ATGACAGTATTTATAGTATT+TGG 0.166521 tig0004652:+6248 Msa1340910:CDS
TGTTTCAAGTTGCTGGTATT+TGG 0.244607 tig0004652:-7111 Msa1340910:intergenic
GCTTCATTTGAGTGGTCTTT+TGG 0.245192 tig0004652:+726 Msa1340910:CDS
TTCAGGACTTGATGCCTTCC+AGG 0.251382 tig0004652:+2518 Msa1340910:intron
TTGACGTACTTCTCAAAATT+CGG 0.256412 tig0004652:+2702 Msa1340910:CDS
GAGAGGTCATCTAGAGTAAT+TGG 0.267154 tig0004652:-3721 Msa1340910:intergenic
ATTGCATCAGCAGTTATCTT+TGG 0.296267 tig0004652:+4422 Msa1340910:CDS
GGGAAGATTATTAGCAATAA+TGG 0.301474 tig0004652:+636 Msa1340910:CDS
AAAACAGCACCAAACATTAA+TGG 0.307584 tig0004652:-5555 Msa1340910:intergenic
TGTGTCTGATCAACTTGTTC+AGG 0.319549 tig0004652:-7182 Msa1340910:intergenic
GGGGCTGGTGGAAGCAATTT+CGG 0.321572 tig0004652:+3791 Msa1340910:CDS
CAGCTGATTACAAACCTTCT+AGG 0.327036 tig0004652:-7283 Msa1340910:intergenic
AGACAGAATGGGGTTGCTTC+AGG 0.329300 tig0004652:+4487 Msa1340910:CDS
GTTTCAAGTTGCTGGTATTT+GGG 0.340488 tig0004652:-7110 Msa1340910:intergenic
CTCCGACAACTTGCACTTGA+TGG 0.340538 tig0004652:+2561 Msa1340910:CDS
ATTATTGCTAATAATCTTCC+CGG 0.345391 tig0004652:-634 Msa1340910:intergenic
CTAGTGTTTCTCTGATTAGA+TGG 0.346078 tig0004652:+6321 Msa1340910:CDS
GAGGTGTTGTTTCAAGTTGC+TGG 0.349346 tig0004652:-7118 Msa1340910:intergenic
TTTAATAATTTATCTAATAC+AGG 0.353967 tig0004652:+7340 Msa1340910:three_prime_UTR
ATTGGCTCCTTTATCCTAGA+AGG 0.355202 tig0004652:+7269 Msa1340910:CDS
ATAATGGGACCTTCAGGTTC+AGG 0.359612 tig0004652:+652 Msa1340910:CDS
CATTCATTTGATATTCAAAC+TGG 0.364812 tig0004652:+6574 Msa1340910:CDS
GTCAGAAGAACTGTAGTCTA+TGG 0.365223 tig0004652:-3617 Msa1340910:intergenic
GATTTCCACGATGTCATTAT+CGG 0.365374 tig0004652:+7449 Msa1340910:three_prime_UTR
GCACTAGAGCGTCTTTCCTT+TGG 0.368579 tig0004652:+6996 Msa1340910:CDS
TTACAAACCTTCTAGGATAA+AGG 0.369600 tig0004652:-7276 Msa1340910:intergenic
CATCCTTGACCGAACTTTGT+TGG 0.376526 tig0004652:-4396 Msa1340910:intergenic
TTAGCAATAATGGGACCTTC+AGG 0.377039 tig0004652:+646 Msa1340910:CDS
CTTGTTTATGCTGGTCCTGC+TGG 0.379530 tig0004652:+2669 Msa1340910:CDS
CAGATAGGGGCCCAAGGAAT+AGG 0.379916 tig0004652:-5490 Msa1340910:intergenic
TTGCATCAGCAGTTATCTTT+GGG 0.380185 tig0004652:+4423 Msa1340910:CDS
TGATTGTGGTCTTGTTCTAT+AGG 0.381973 tig0004652:-7424 Msa1340910:intergenic
GGAATCCAGCGGAAGATGAT+TGG 0.386259 tig0004652:-6299 Msa1340910:intergenic
GAATCCAGCGGAAGATGATT+GGG 0.387932 tig0004652:-6298 Msa1340910:intergenic
ACATTGCTCAATGTTCTTGC+TGG 0.392961 tig0004652:+682 Msa1340910:CDS
GCAGCATTTCCATTAATGTT+TGG 0.393373 tig0004652:+5546 Msa1340910:CDS
CACACTTTCAGGGCCTTTCA+AGG 0.393817 tig0004652:+6508 Msa1340910:intron
TCTGAGTGGAGAAGCAAAAC+CGG 0.400838 tig0004652:+615 Msa1340910:CDS
TTCTAAAGGCTCCTATTCCT+TGG 0.402694 tig0004652:+5479 Msa1340910:CDS
AAATGTGGTTTACTGTGGTC+AGG 0.405439 tig0004652:-7140 Msa1340910:intergenic
TGACGTACTTCTCAAAATTC+GGG 0.406341 tig0004652:+2703 Msa1340910:CDS
TCTAGGATAAAGGAGCCAAT+AGG 0.407016 tig0004652:-7266 Msa1340910:intergenic
GACATATTCATCCCTCTCCT+TGG 0.420690 tig0004652:-990 Msa1340910:intergenic
AAGATGATTGGGGTATTCTC+AGG 0.423561 tig0004652:-6287 Msa1340910:intergenic
GTAAACTAACCTCATTAAAG+TGG 0.427499 tig0004652:-5601 Msa1340910:intergenic
GGGTCTTACCGTTGGTGCTA+TGG 0.427826 tig0004652:+6184 Msa1340910:CDS
CAATAGTTTAGAAAACAGAT+AGG 0.434808 tig0004652:-5505 Msa1340910:intergenic
GTCATTGCTGCTTCAGTGGT+TGG 0.441866 tig0004652:-6209 Msa1340910:intergenic
TGATATTCAAACTGGAGAAC+AGG 0.442204 tig0004652:+6582 Msa1340910:CDS
GGAAGATTATTAGCAATAAT+GGG 0.443325 tig0004652:+637 Msa1340910:CDS
ATGTGCATGCTTACCTGTTG+TGG 0.444270 tig0004652:-1672 Msa1340910:intergenic
TCTTAGACGGGCATGGATGC+AGG 0.446165 tig0004652:+3819 Msa1340910:CDS
ATCCTTTGCTGCATCTGCGA+TGG 0.450126 tig0004652:+6163 Msa1340910:CDS
TATGTTATCAGATTCTTAGC+TGG 0.450356 tig0004652:+7500 Msa1340910:three_prime_UTR
TCTAAAGGCTCCTATTCCTT+GGG 0.451188 tig0004652:+5480 Msa1340910:CDS
TCCTTTGCTGCATCTGCGAT+GGG 0.456795 tig0004652:+6164 Msa1340910:CDS
CTAGAAGGTTTGTAATCAGC+TGG 0.458537 tig0004652:+7284 Msa1340910:exon
TGGTCTTGTTCTATAGGAAA+AGG 0.460584 tig0004652:-7418 Msa1340910:intergenic
GAGCCAATAGGGTCTACTTC+AGG 0.462946 tig0004652:-7254 Msa1340910:intergenic
ATTTCGGTTGCTTCTTAGAC+GGG 0.462980 tig0004652:+3807 Msa1340910:CDS
GATGGTTCCCTTGTTTATGC+TGG 0.464541 tig0004652:+2660 Msa1340910:CDS
TCAACAATTGACCGTTCCTT+CGG 0.467438 tig0004652:-5447 Msa1340910:intergenic
CTTCCAGGCTGAGAAGGTTA+TGG 0.471980 tig0004652:+2533 Msa1340910:CDS
GACCATCAAGTGCAAGTTGT+CGG 0.473333 tig0004652:-2563 Msa1340910:intergenic
GTTGATAGAGAACGTTCTAA+AGG 0.474448 tig0004652:+5465 Msa1340910:CDS
AGAAAAGAAACGTTTATCCT+TGG 0.475014 tig0004652:+1604 Msa1340910:CDS
CTAGGATAAAGGAGCCAATA+GGG 0.475139 tig0004652:-7265 Msa1340910:intergenic
TCACCTGAAGTAGACCCTAT+TGG 0.475355 tig0004652:+7251 Msa1340910:CDS
TGTGCATGCTTACCTGTTGT+GGG 0.477043 tig0004652:-1671 Msa1340910:intergenic
CTTTGCATCAATGAATTTCG+TGG 0.478244 tig0004652:+6532 Msa1340910:CDS
ACTTCAATACAAGACAGAAT+GGG 0.479972 tig0004652:+4476 Msa1340910:CDS
GACTTCAATACAAGACAGAA+TGG 0.481217 tig0004652:+4475 Msa1340910:CDS
AATGGAAATGCTGCTCCAAT+GGG 0.482556 tig0004652:-5537 Msa1340910:intergenic
TAATGGAAATGCTGCTCCAA+TGG 0.483214 tig0004652:-5538 Msa1340910:intergenic
TAGGTTTGCTTATGTGAGAC+AGG 0.484656 tig0004652:+886 Msa1340910:intron
TTTCCATAACCTTCTCAGCC+TGG 0.491728 tig0004652:-2536 Msa1340910:intergenic
GGTTGCTTCTTAGACGGGCA+TGG 0.494016 tig0004652:+3812 Msa1340910:CDS
TATAAATACTGTCATAAGAG+AGG 0.495940 tig0004652:-6240 Msa1340910:intergenic
TTGTAAGCGTTTCTGGAACT+CGG 0.497619 tig0004652:-763 Msa1340910:intergenic
AATAGTTTAGAAAACAGATA+GGG 0.500330 tig0004652:-5504 Msa1340910:intergenic
TACTGTCATTGCTGCTTCAG+TGG 0.500515 tig0004652:-6213 Msa1340910:intergenic
CTTCTCACAGCTTACTGTGC+GGG 0.503628 tig0004652:+919 Msa1340910:CDS
GTAATAGTAAACTGTGACAG+TGG 0.505942 tig0004652:+7525 Msa1340910:three_prime_UTR
ACAGTATTTATAGTATTTGG+TGG 0.511010 tig0004652:+6251 Msa1340910:CDS
GTACCAACTTGGCTGACCTC+TGG 0.512144 tig0004652:-7212 Msa1340910:intergenic
TTTGCTGATGAACCCACAAC+AGG 0.513694 tig0004652:+1659 Msa1340910:CDS
TGGGATGGAGACGTGCCATT+GGG 0.515919 tig0004652:-5581 Msa1340910:intergenic
TTTGTTGGTAGGTGCATCAC+GGG 0.516639 tig0004652:-4381 Msa1340910:intergenic
TTTAGATTTGGGAAATTCTG+TGG 0.517328 tig0004652:+6125 Msa1340910:intron
AATTTCGGTTGCTTCTTAGA+CGG 0.519140 tig0004652:+3806 Msa1340910:CDS
TAATGGGACCTTCAGGTTCA+GGG 0.520677 tig0004652:+653 Msa1340910:CDS
GTCTACTTCAGGTGACTCAA+GGG 0.521782 tig0004652:-7243 Msa1340910:intergenic
GGTCTACTTCAGGTGACTCA+AGG 0.522974 tig0004652:-7244 Msa1340910:intergenic
TATTCAGTGATAGGAGTATG+TGG 0.523660 tig0004652:+7875 Msa1340910:three_prime_UTR
GTGGGATGGAGACGTGCCAT+TGG 0.524146 tig0004652:-5582 Msa1340910:intergenic
TTGCTGTACACTGATCCTCT+TGG 0.524353 tig0004652:-2612 Msa1340910:intergenic
CTTGACCGAACTTTGTTGGT+AGG 0.525984 tig0004652:-4392 Msa1340910:intergenic
ATGCACCTACCAACAAAGTT+CGG 0.534470 tig0004652:+4387 Msa1340910:CDS
GTCTGAAAATTGAAGCAGGC+AGG 0.534740 tig0004652:+7956 Msa1340910:three_prime_UTR
ATAAATACTGTCATAAGAGA+GGG 0.536052 tig0004652:-6239 Msa1340910:intergenic
GTCTCCATCCCACTTTAATG+AGG 0.538151 tig0004652:+5592 Msa1340910:CDS
CTGAGTGGAGAAGCAAAACC+GGG 0.541350 tig0004652:+616 Msa1340910:CDS
GACATTGTCTTGCTAACTGA+TGG 0.542803 tig0004652:+2642 Msa1340910:CDS
CTATTGGCTGAGGCTCCCAT+TGG 0.545153 tig0004652:+5522 Msa1340910:CDS
TCATCAGCAAATATAACAGA+TGG 0.545628 tig0004652:-1647 Msa1340910:intergenic
TGATGCCTTCCAGGCTGAGA+AGG 0.546117 tig0004652:+2527 Msa1340910:CDS
GCACCAGAGGTCAGCCAAGT+TGG 0.549417 tig0004652:+7209 Msa1340910:CDS
GTTGGTGATGCAAAAGTTCG+TGG 0.550805 tig0004652:+1569 Msa1340910:CDS
TGCAAGCAGTTCACATGCCA+AGG 0.551391 tig0004652:-1621 Msa1340910:intergenic
ATTGATGCAAAGTCCTTGAA+AGG 0.557199 tig0004652:-6521 Msa1340910:intergenic
CAGCAGGACCAGCATAAACA+AGG 0.557586 tig0004652:-2668 Msa1340910:intergenic
ACCCATCGCAGATGCAGCAA+AGG 0.561192 tig0004652:-6165 Msa1340910:intergenic
CTTTGTTGGTAGGTGCATCA+CGG 0.566118 tig0004652:-4382 Msa1340910:intergenic
CTAACCTCATTAAAGTGGGA+TGG 0.567877 tig0004652:-5596 Msa1340910:intergenic
GGGGCTCGTCCGTACCAACT+TGG 0.570358 tig0004652:-7223 Msa1340910:intergenic
TGATGTCTGAAAATTGAAGC+AGG 0.570520 tig0004652:+7952 Msa1340910:three_prime_UTR
ATACCCCAATCATCTTCCGC+TGG 0.572745 tig0004652:+6294 Msa1340910:CDS
GCTCACTTCTCAGTAACTGC+AGG 0.575153 tig0004652:-7396 Msa1340910:intergenic
TCACCTCGGCTTCATTTGAG+TGG 0.576603 tig0004652:+718 Msa1340910:CDS
AGAGGTCAGCCAAGTTGGTA+CGG 0.577813 tig0004652:+7214 Msa1340910:CDS
GTAGTCTATGGATATAAGAT+CGG 0.582458 tig0004652:-3605 Msa1340910:intergenic
CATATCTTCTGCCAAGGAGA+GGG 0.585936 tig0004652:+979 Msa1340910:CDS
GTTGTCTTCCCTGAACCTGA+AGG 0.588343 tig0004652:-661 Msa1340910:intergenic
TGCTGCTATAAACACAGCTA+TGG 0.591313 tig0004652:+5395 Msa1340910:CDS
GTAGAGTGATATCTTTGCAA+AGG 0.593191 tig0004652:+7369 Msa1340910:three_prime_UTR
AGATGATTGGGGTATTCTCA+GGG 0.593923 tig0004652:-6286 Msa1340910:intergenic
CATAACCTTCTCAGCCTGGA+AGG 0.596713 tig0004652:-2532 Msa1340910:intergenic
TAAACTAACCTCATTAAAGT+GGG 0.596839 tig0004652:-5600 Msa1340910:intergenic
GTCAATGGTTCATCACCAGC+AGG 0.597243 tig0004652:-2684 Msa1340910:intergenic
AGTTGTGCTGATACTAATGT+TGG 0.600492 tig0004652:+1551 Msa1340910:CDS
TTTCTCAAGGAGAAGGTAGG+TGG 0.600868 tig0004652:-7081 Msa1340910:intergenic
GTAGAAAGAGAATCAGCAAG+AGG 0.603459 tig0004652:+3749 Msa1340910:CDS
ACATATCTTCTGCCAAGGAG+AGG 0.603717 tig0004652:+978 Msa1340910:CDS
TCTGCGATGGGTCTTACCGT+TGG 0.603851 tig0004652:+6176 Msa1340910:CDS
CATCAGCAAATATAACAGAT+GGG 0.610028 tig0004652:-1646 Msa1340910:intergenic
TAGAAGGTTTGTAATCAGCT+GGG 0.614454 tig0004652:+7285 Msa1340910:exon
CATCTAATCAGAGAAACACT+AGG 0.617786 tig0004652:-6320 Msa1340910:intergenic
GACTGTGGGTGTATTTCCGA+AGG 0.619322 tig0004652:+5431 Msa1340910:CDS
TAAACCACATTTAAAACTCG+AGG 0.620655 tig0004652:+7151 Msa1340910:CDS
AAAGTTCGTGGAATCAGTGG+TGG 0.625280 tig0004652:+1581 Msa1340910:CDS
TGGGTGTATTTCCGAAGGAA+CGG 0.626301 tig0004652:+5436 Msa1340910:CDS
GGCTGCTCTCACAAAGACTG+TGG 0.628321 tig0004652:+5416 Msa1340910:CDS
TCACAACATATCTTCTGCCA+AGG 0.630599 tig0004652:+973 Msa1340910:CDS
AGAAAACAGATAGGGGCCCA+AGG 0.631313 tig0004652:-5496 Msa1340910:intergenic
GTCAGCTATCAGCGTCACCT+CGG 0.631548 tig0004652:+704 Msa1340910:CDS
ATAGTTTAGAAAACAGATAG+GGG 0.633834 tig0004652:-5503 Msa1340910:intergenic
CTACCAACAAAGTTCGGTCA+AGG 0.640251 tig0004652:+4393 Msa1340910:CDS
TCTTCTCACAGCTTACTGTG+CGG 0.642529 tig0004652:+918 Msa1340910:CDS
GGTTGGAACCATAGCACCAA+CGG 0.645318 tig0004652:-6192 Msa1340910:intergenic
AGACCACTCAAATGAAGCCG+AGG 0.647618 tig0004652:-721 Msa1340910:intergenic
CTTCAATACAAGACAGAATG+GGG 0.649068 tig0004652:+4477 Msa1340910:CDS
GCTGCTCTCACAAAGACTGT+GGG 0.651595 tig0004652:+5417 Msa1340910:CDS
TGCTCTATACATCAGCCAAG+AGG 0.652876 tig0004652:+2597 Msa1340910:CDS
ACTGAAGCAGCAATGACAGT+AGG 0.653407 tig0004652:+6215 Msa1340910:CDS
GCAAAAGTTCGTGGAATCAG+TGG 0.656069 tig0004652:+1578 Msa1340910:CDS
AGCAGGACCAGCATAAACAA+GGG 0.658756 tig0004652:-2667 Msa1340910:intergenic
AATCCAGCGGAAGATGATTG+GGG 0.662964 tig0004652:-6297 Msa1340910:intergenic
TCTACTTCAGGTGACTCAAG+GGG 0.666335 tig0004652:-7242 Msa1340910:intergenic
TAAATACTGTCATAAGAGAG+GGG 0.674895 tig0004652:-6238 Msa1340910:intergenic
GATTAACATGATCTGAGCAG+TGG 0.680131 tig0004652:-3567 Msa1340910:intergenic
GTTTGCTTATGTGAGACAGG+AGG 0.685622 tig0004652:+889 Msa1340910:CDS
TCAGACACATGAAGCACCAG+AGG 0.692257 tig0004652:+7196 Msa1340910:CDS
TGTGGTTTACTGTGGTCAGG+AGG 0.694950 tig0004652:-7137 Msa1340900:intergenic
GAGAAACACTAGGAATCCAG+CGG 0.705202 tig0004652:-6310 Msa1340900:intergenic
ATCGTGGAAATCAGTGATTG+TGG 0.725178 tig0004652:-7438 Msa1340900:intergenic
GATGTCCGATAATGACATCG+TGG 0.732959 tig0004652:-7454 Msa1340900:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTGAAAATAATTAAATATTA+TGG + tig0004652:5171-5190 Msa1340910:intron 10.0%
!! GAAAATAATTAAATATTATG+GGG + tig0004652:5173-5192 Msa1340910:intron 10.0%
!!! AAAATAGAATATTGTTATTT+TGG + tig0004652:7051-7070 Msa1340910:CDS 10.0%
!! TTTAATAATTTATCTAATAC+AGG + tig0004652:7340-7359 Msa1340910:three_prime_UTR 10.0%
!! AAAAATCATTGTATTAACTT+TGG + tig0004652:459-478 Msa1340910:intron 15.0%
!! TCAACTTATTATAAAGAAAT+CGG - tig0004652:2861-2880 Msa1340910:intergenic 15.0%
!! TTAATATCTTATTAGAAGTA+AGG + tig0004652:3450-3469 Msa1340910:intron 15.0%
!! TAATATCTTATTAGAAGTAA+GGG + tig0004652:3451-3470 Msa1340910:intron 15.0%
!!! TTGATAATTTTTTATGAAAC+AGG + tig0004652:3542-3561 Msa1340910:intron 15.0%
!!! ATTCAATTTTTAATCTACTA+CGG + tig0004652:4866-4885 Msa1340910:intron 15.0%
!!! CTATTAATCATTTGATTTTT+TGG + tig0004652:5035-5054 Msa1340910:intron 15.0%
!!! TTATTTTCAGTTTTAACTTA+GGG - tig0004652:5161-5180 Msa1340910:intergenic 15.0%
!!! ATTATTTTCAGTTTTAACTT+AGG - tig0004652:5162-5181 Msa1340910:intergenic 15.0%
!! GAGATAATTAAAATAAAAGA+TGG - tig0004652:5253-5272 Msa1340910:intergenic 15.0%
!! TAAATAAACAAAGTCATTTA+CGG - tig0004652:5779-5798 Msa1340910:intergenic 15.0%
!!! AATGACTTTGTTTATTTATT+TGG + tig0004652:5781-5800 Msa1340910:intron 15.0%
!!! ATGACTTTGTTTATTTATTT+GGG + tig0004652:5782-5801 Msa1340910:intron 15.0%
!! TTTGAACAATAAATAATTCT+TGG - tig0004652:5833-5852 Msa1340910:intergenic 15.0%
!! AAATTAGTTATATAATGAGA+TGG - tig0004652:6095-6114 Msa1340910:intergenic 15.0%
!!! TTATTTTGACATTTTAGATT+TGG + tig0004652:6113-6132 Msa1340910:intron 15.0%
!!! TATTTTGACATTTTAGATTT+GGG + tig0004652:6114-6133 Msa1340910:intron 15.0%
!!! CATTTTGAAACAAATTTTTT+TGG - tig0004652:7630-7649 Msa1340910:intergenic 15.0%
!! AAATTATCCTTATTAACTAT+TGG - tig0004652:7757-7776 Msa1340910:intergenic 15.0%
!! AATAGTTAATAAGGATAATT+TGG + tig0004652:7756-7775 Msa1340910:intron 15.0%
!! AACAATTAATATTGTTCCAA+CGG - tig0004652:338-357 Msa1340910:intergenic 20.0%
!!! AATTTTGATTTTGTTGATGA+TGG + tig0004652:548-567 Msa1340910:intron 20.0%
!!! AGATTTGATTTGAAATGAAT+AGG + tig0004652:573-592 Msa1340910:intron 20.0%
!!! AATTTTCATTTTTGGAACTT+GGG - tig0004652:1229-1248 Msa1340910:intergenic 20.0%
!!! TAATTTTCATTTTTGGAACT+TGG - tig0004652:1230-1249 Msa1340910:intergenic 20.0%
!!! TCGATAGTAATTTTCATTTT+TGG - tig0004652:1237-1256 Msa1340910:intergenic 20.0%
!!! AATTTTCATTTTTGGAACTT+GGG - tig0004652:1229-1248 Msa1340910:intergenic 20.0%
!!! TAATTTTCATTTTTGGAACT+TGG - tig0004652:1230-1249 Msa1340910:intergenic 20.0%
!!! TCGATAGTAATTTTCATTTT+TGG - tig0004652:1237-1256 Msa1340910:intergenic 20.0%
!! TCAAACTTTGATTATGATAT+AGG + tig0004652:1717-1736 Msa1340910:intron 20.0%
!! CAAACTTTGATTATGATATA+GGG + tig0004652:1718-1737 Msa1340910:intron 20.0%
!!! TATTGAGTTTTAAATTGCTA+GGG - tig0004652:2088-2107 Msa1340910:intergenic 20.0%
!! TGCATATATTATTACACTAT+AGG - tig0004652:2312-2331 Msa1340910:intergenic 20.0%
!!! AAGAGTATATGAAGTTATTT+GGG - tig0004652:2817-2836 Msa1340910:intergenic 20.0%
!!! TAAGAGTATATGAAGTTATT+TGG - tig0004652:2818-2837 Msa1340910:intergenic 20.0%
!!! ATTTTGTTTAACATTTGTCA+TGG + tig0004652:3490-3509 Msa1340910:intron 20.0%
!! TATAAAGACAATATGTGATA+TGG - tig0004652:4210-4229 Msa1340910:intergenic 20.0%
!!! TTTTAAGTTCCAAAACTATA+AGG - tig0004652:4272-4291 Msa1340910:intergenic 20.0%
!!! TATAGTTTTGGAACTTAAAA+AGG + tig0004652:4272-4291 Msa1340910:intron 20.0%
!!! ATAGTTTTGGAACTTAAAAA+GGG + tig0004652:4273-4292 Msa1340910:intron 20.0%
!! ACATATTTATATAGTAGAAG+AGG - tig0004652:4674-4693 Msa1340910:intergenic 20.0%
!! AAATATGTATTGTATGTGTA+AGG + tig0004652:4686-4705 Msa1340910:intron 20.0%
!! TATTAAATTGTTCTTCTACT+AGG + tig0004652:4965-4984 Msa1340910:intron 20.0%
!! AATAGTTTAGAAAACAGATA+GGG - tig0004652:5507-5526 Msa1340910:intergenic 20.0%
!!! ATTTCATTTTGCTTGTTTTT+TGG + tig0004652:5671-5690 Msa1340910:intron 20.0%
!!! TTTCATTTTGCTTGTTTTTT+GGG + tig0004652:5672-5691 Msa1340910:intron 20.0%
!! ATGACAGTATTTATAGTATT+TGG + tig0004652:6248-6267 Msa1340910:CDS 20.0%
!!! TTCTGATTTTTTAACAATCA+AGG + tig0004652:6353-6372 Msa1340910:intron 20.0%
!!! TCTGATTTTTTAACAATCAA+GGG + tig0004652:6354-6373 Msa1340910:intron 20.0%
!! TAAATTTATCGCTTATTTGA+TGG - tig0004652:6809-6828 Msa1340910:intergenic 20.0%
!! AATTTAACTCAAAACACAAA+TGG - tig0004652:6855-6874 Msa1340910:intergenic 20.0%
!! TTTCTTGGATAATATAAGAT+TGG + tig0004652:6903-6922 Msa1340910:intron 20.0%
!!! TATAAGATTGGTTGTTTAAT+TGG + tig0004652:6915-6934 Msa1340910:intron 20.0%
!!! ATAAGATTGGTTGTTTAATT+GGG + tig0004652:6916-6935 Msa1340910:intron 20.0%
!!! GCTTGATGATTATTATTTTT+TGG - tig0004652:7479-7498 Msa1340910:intergenic 20.0%
!! AAACTAACCAATAGTTAATA+AGG + tig0004652:7747-7766 Msa1340910:intron 20.0%
!! AATGATTAAAAGAAAGAGAA+TGG - tig0004652:7790-7809 Msa1340910:intergenic 20.0%
!!! AGTATTTTTTATTCAGTGAT+AGG + tig0004652:7866-7885 Msa1340910:three_prime_UTR 20.0%
!! TTTTTGCTTAAAAATCTGAG+TGG + tig0004652:601-620 Msa1340910:CDS 25.0%
! ATTATTGCTAATAATCTTCC+CGG - tig0004652:637-656 Msa1340910:intergenic 25.0%
! GGAAGATTATTAGCAATAAT+GGG + tig0004652:637-656 Msa1340910:CDS 25.0%
! TTCAATCATGAATCTGATAT+AGG - tig0004652:1460-1479 Msa1340910:intergenic 25.0%
! TCAATAAGAAATTCATCTTG+TGG + tig0004652:1760-1779 Msa1340910:intron 25.0%
! AGTTAGTTAATTTAGACAGT+TGG - tig0004652:2024-2043 Msa1340910:intergenic 25.0%
! AGAAGCAATCCAAAAATTAA+GGG - tig0004652:2057-2076 Msa1340910:intergenic 25.0%
!!! CTATTGAGTTTTAAATTGCT+AGG - tig0004652:2089-2108 Msa1340910:intergenic 25.0%
!!! TTCATATTGATTCCTTACAA+AGG + tig0004652:2133-2152 Msa1340910:intron 25.0%
!!! TCATATTGATTCCTTACAAA+GGG + tig0004652:2134-2153 Msa1340910:intron 25.0%
!!! TTTTTTGTGTTGAATCACAA+TGG + tig0004652:2228-2247 Msa1340910:intron 25.0%
!! TTTTTGTGTTGAATCACAAT+GGG + tig0004652:2229-2248 Msa1340910:intron 25.0%
! AAGAATCATCAAAAGAAGAA+AGG - tig0004652:2347-2366 Msa1340910:intergenic 25.0%
! TAACTTCATGACAAAATTAG+TGG - tig0004652:2496-2515 Msa1340910:intergenic 25.0%
! AAGACAGCAAAAAGTAAATA+AGG - tig0004652:2741-2760 Msa1340910:intergenic 25.0%
! CTGTCTTACATTCTTAATTT+GGG + tig0004652:2754-2773 Msa1340910:intron 25.0%
!! TGTCTTACATTCTTAATTTG+GGG + tig0004652:2755-2774 Msa1340910:intron 25.0%
!! TTGGAGTACTTAAGAAATTA+TGG + tig0004652:2791-2810 Msa1340910:intron 25.0%
! CTTCTATAATCTAGATTTCT+TGG - tig0004652:2947-2966 Msa1340910:intergenic 25.0%
! AATATCAAGCTAAAACTTGA+TGG - tig0004652:3011-3030 Msa1340910:intergenic 25.0%
!! TGATATTGATAATACCATTG+TGG + tig0004652:3024-3043 Msa1340910:intron 25.0%
! GTAAACCTTAGATATTGATA+AGG - tig0004652:3113-3132 Msa1340910:intergenic 25.0%
!!! CAATATCTAAGGTTTACTTT+TGG + tig0004652:3116-3135 Msa1340910:intron 25.0%
! GATATTAACAATAAACAGCA+TGG - tig0004652:3438-3457 Msa1340910:intergenic 25.0%
! TGTCTTTCTACTTATTGAAA+TGG + tig0004652:3859-3878 Msa1340910:intron 25.0%
! AGTATTAAAGTGAGTGTTAA+AGG + tig0004652:4060-4079 Msa1340910:intron 25.0%
!!! ATAGGTAGTTAGTAGTTTTA+TGG + tig0004652:4621-4640 Msa1340910:intron 25.0%
!! TACCTTAGACATGATTTTAT+TGG + tig0004652:5096-5115 Msa1340910:intron 25.0%
! ATAGTTTAGAAAACAGATAG+GGG - tig0004652:5506-5525 Msa1340910:intergenic 25.0%
! CAATAGTTTAGAAAACAGAT+AGG - tig0004652:5508-5527 Msa1340910:intergenic 25.0%
!! CTATCTGTTTTCTAAACTAT+TGG + tig0004652:5506-5525 Msa1340910:CDS 25.0%
! TAAACTAACCTCATTAAAGT+GGG - tig0004652:5603-5622 Msa1340910:intergenic 25.0%
!! ACTTTGTTTATTTATTTGGG+CGG + tig0004652:5785-5804 Msa1340910:intron 25.0%
! TTTATTGTTCAAAATCCCAA+AGG + tig0004652:5840-5859 Msa1340910:intron 25.0%
! ATAAATACTGTCATAAGAGA+GGG - tig0004652:6242-6261 Msa1340910:intergenic 25.0%
! TATAAATACTGTCATAAGAG+AGG - tig0004652:6243-6262 Msa1340910:intergenic 25.0%
! ACAGTATTTATAGTATTTGG+TGG + tig0004652:6251-6270 Msa1340910:CDS 25.0%
!!! CTGATTTTTTAACAATCAAG+GGG + tig0004652:6355-6374 Msa1340910:intron 25.0%
!! TAATGTTCTGTTTCTTAGTT+CGG - tig0004652:6404-6423 Msa1340910:intergenic 25.0%
!!! TAAATTAAGTTGGTATCCAT+TGG - tig0004652:6486-6505 Msa1340910:intergenic 25.0%
! AAAGTGTGCATAAATTAAGT+TGG - tig0004652:6496-6515 Msa1340910:intergenic 25.0%
! TTAATTTATGCACACTTTCA+GGG + tig0004652:6498-6517 Msa1340910:intron 25.0%
! CATTCATTTGATATTCAAAC+TGG + tig0004652:6574-6593 Msa1340910:CDS 25.0%
! CAGGTAAATTTAAAAGATTG+CGG - tig0004652:6615-6634 Msa1340910:intergenic 25.0%
!!! ATATATTATGAGTTTTGACC+AGG + tig0004652:6659-6678 Msa1340910:intron 25.0%
!! CTTTGGAAAAAGTACAATTA+GGG + tig0004652:7013-7032 Msa1340910:CDS 25.0%
!! ATTTTAAGCAGTTTCATGTT+TGG + tig0004652:7551-7570 Msa1340910:three_prime_UTR 25.0%
! GGAAAAAGTTATTATTGCAT+TGG - tig0004652:7670-7689 Msa1340910:intergenic 25.0%
!!! TTCAAAATGAGTGTCATTTT+AGG - tig0004652:7838-7857 Msa1340910:intergenic 25.0%
!!! AAATGACACTCATTTTGAAA+CGG + tig0004652:7839-7858 Msa1340910:intron 25.0%
! TGATTTGAAATGAATAGGTG+AGG + tig0004652:578-597 Msa1340910:intron 30.0%
GGGAAGATTATTAGCAATAA+TGG + tig0004652:636-655 Msa1340910:CDS 30.0%
! TTGTTTGATACGAATTTGCT+GGG + tig0004652:802-821 Msa1340910:intron 30.0%
! TTGATGATCGATTGAATTGT+TGG + tig0004652:856-875 Msa1340910:intron 30.0%
!! TTGAATTGTTGGTTTGATGT+AGG + tig0004652:867-886 Msa1340910:intron 30.0%
! AACAATCTCCTTTTCAAAAC+AGG + tig0004652:1013-1032 Msa1340910:CDS 30.0%
AATTCATCAATCTTCAAGGA+AGG - tig0004652:1127-1146 Msa1340910:intergenic 30.0%
CCTTGAAGATTGATGAATTT+CGG + tig0004652:1128-1147 Msa1340910:intron 30.0%
TTGACAACTGCTATTATATC+TGG + tig0004652:1165-1184 Msa1340910:intron 30.0%
AATTCATCAATCTTCAAGGA+AGG - tig0004652:1127-1146 Msa1340910:intergenic 30.0%
CCTTGAAGATTGATGAATTT+CGG + tig0004652:1128-1147 Msa1340910:intron 30.0%
TTGACAACTGCTATTATATC+TGG + tig0004652:1165-1184 Msa1340910:intron 30.0%
! TGAAAATGTGTTAGTCTCAT+TGG + tig0004652:1476-1495 Msa1340910:intron 30.0%
AGAAAAGAAACGTTTATCCT+TGG + tig0004652:1604-1623 Msa1340910:CDS 30.0%
CATCAGCAAATATAACAGAT+GGG - tig0004652:1649-1668 Msa1340910:intergenic 30.0%
TCATCAGCAAATATAACAGA+TGG - tig0004652:1650-1669 Msa1340910:intergenic 30.0%
CTAGATTGTTTGTACACATT+AGG + tig0004652:1807-1826 Msa1340910:intron 30.0%
TCTTTACTCTATTAGCATGT+GGG - tig0004652:1835-1854 Msa1340910:intergenic 30.0%
TTCTTTACTCTATTAGCATG+TGG - tig0004652:1836-1855 Msa1340910:intergenic 30.0%
ACTGAAAATGAACAGAATGA+AGG + tig0004652:1876-1895 Msa1340910:intron 30.0%
CTGAAAATGAACAGAATGAA+GGG + tig0004652:1877-1896 Msa1340910:intron 30.0%
GTTGTGAAAAAAAGAACCAT+TGG - tig0004652:1913-1932 Msa1340910:intergenic 30.0%
ACAAGAGTTTGATCATTCAA+AGG - tig0004652:1952-1971 Msa1340910:intergenic 30.0%
AGTTGGAATAGTTAGTTACT+CGG - tig0004652:2007-2026 Msa1340910:intergenic 30.0%
ATCCAAAAATTAAGGGATCA+TGG - tig0004652:2050-2069 Msa1340910:intergenic 30.0%
GAGAAGCAATCCAAAAATTA+AGG - tig0004652:2058-2077 Msa1340910:intergenic 30.0%
!! CAATATGAAGTGTCGTAAAT+TGG - tig0004652:2122-2141 Msa1340910:intergenic 30.0%
TAGTGTAAAATCAACTCCTT+GGG - tig0004652:2174-2193 Msa1340910:intergenic 30.0%
TTAGTGTAAAATCAACTCCT+TGG - tig0004652:2175-2194 Msa1340910:intergenic 30.0%
!! TTGCACCATTTGATTTGTTT+AGG + tig0004652:2197-2216 Msa1340910:intron 30.0%
!! TGCACCATTTGATTTGTTTA+GGG + tig0004652:2198-2217 Msa1340910:intron 30.0%
! TTTGTCATGAAGTTACTTTC+AGG + tig0004652:2501-2520 Msa1340910:intron 30.0%
!! AATTTTGAGAAGTACGTCAA+TGG - tig0004652:2702-2721 Msa1340910:intergenic 30.0%
TTGACGTACTTCTCAAAATT+CGG + tig0004652:2702-2721 Msa1340910:CDS 30.0%
GCTGTCTTACATTCTTAATT+TGG + tig0004652:2753-2772 Msa1340910:intron 30.0%
AAGAATATCGTTTACCACAA+TGG - tig0004652:3041-3060 Msa1340910:intergenic 30.0%
ATTGTGGTAAACGATATTCT+TGG + tig0004652:3040-3059 Msa1340910:intron 30.0%
AGTCTCCTTATCAATATCTA+AGG + tig0004652:3105-3124 Msa1340910:intron 30.0%
! GAAGAGCATAATCTCAAAAT+TGG + tig0004652:3175-3194 Msa1340910:intron 30.0%
! TATATTTCTAACTTTCTGCG+AGG + tig0004652:3204-3223 Msa1340910:intron 30.0%
CAGAAATTAAATGCAGAACA+TGG - tig0004652:3243-3262 Msa1340910:intergenic 30.0%
ATACCTATATCTTGTGTAGT+AGG + tig0004652:3267-3286 Msa1340910:intron 30.0%
TTACCTACTACACAAGATAT+AGG - tig0004652:3273-3292 Msa1340910:intergenic 30.0%
!!! TGCTTTAGCTTTTATTTGAG+AGG + tig0004652:3296-3315 Msa1340910:intron 30.0%
!!! GCTTTAGCTTTTATTTGAGA+GGG + tig0004652:3297-3316 Msa1340910:intron 30.0%
! TGTTAATCCTGCAGAATTTT+TGG + tig0004652:3582-3601 Msa1340910:CDS 30.0%
GTAGTCTATGGATATAAGAT+CGG - tig0004652:3608-3627 Msa1340910:intergenic 30.0%
GTGTTTATTCCTCTCAAAAA+AGG + tig0004652:3641-3660 Msa1340910:CDS 30.0%
TTATTGAAATGGCTGAACTT+GGG + tig0004652:3870-3889 Msa1340910:intron 30.0%
CTATTGGAAGAAATTCATGT+GGG - tig0004652:4021-4040 Msa1340910:intergenic 30.0%
TCTATTGGAAGAAATTCATG+TGG - tig0004652:4022-4041 Msa1340910:intergenic 30.0%
ACAAGACATAATCACAAAAG+TGG + tig0004652:4113-4132 Msa1340910:intron 30.0%
GTCTTTATATTCTTTACCTC+TGG + tig0004652:4221-4240 Msa1340910:intron 30.0%
!! ATTAGACAGCCTTATAGTTT+TGG + tig0004652:4260-4279 Msa1340910:intron 30.0%
GATGATTTATATCTTGCAGT+CGG + tig0004652:4295-4314 Msa1340910:intron 30.0%
!!! TTATCTTTGGGTCAGTTTTT+TGG + tig0004652:4435-4454 Msa1340910:CDS 30.0%
ACTTCAATACAAGACAGAAT+GGG + tig0004652:4476-4495 Msa1340910:CDS 30.0%
TACATAATAATGCGTATGAC+AGG - tig0004652:4554-4573 Msa1340910:intergenic 30.0%
!!! GTTAGTAGTTTTATGGAGTT+AGG + tig0004652:4628-4647 Msa1340910:intron 30.0%
!! AGTTTTATGGAGTTAGGAAA+TGG + tig0004652:4634-4653 Msa1340910:intron 30.0%
ATAATTACTCCTATTCGAGA+AGG - tig0004652:4773-4792 Msa1340910:intergenic 30.0%
TATGCACATTCGTATATCAT+TGG + tig0004652:4912-4931 Msa1340910:intron 30.0%
TACAAATACATACTTGCAGA+AGG - tig0004652:5069-5088 Msa1340910:intergenic 30.0%
GTCCAATAAAATCATGTCTA+AGG - tig0004652:5101-5120 Msa1340910:intergenic 30.0%
! TCAAGCTCTTAAAGTATTAG+TGG + tig0004652:5121-5140 Msa1340910:intron 30.0%
ACTAAAATGACAGTTTCACT+TGG + tig0004652:5330-5349 Msa1340910:intron 30.0%
GAATGTCATCCATGTAATTA+AGG - tig0004652:5369-5388 Msa1340910:intergenic 30.0%
AAAACAGCACCAAACATTAA+TGG - tig0004652:5558-5577 Msa1340910:intergenic 30.0%
GTAAACTAACCTCATTAAAG+TGG - tig0004652:5604-5623 Msa1340910:intergenic 30.0%
!! ATGAGGTTAGTTTACTTAGT+TGG + tig0004652:5609-5628 Msa1340910:intron 30.0%
!!! GTAGTGTAGGTTGATTTTTT+TGG + tig0004652:5694-5713 Msa1340910:intron 30.0%
! TTACGGATTATGCGAAAATT+TGG - tig0004652:5762-5781 Msa1340910:intergenic 30.0%
! ATAGGGGTATACATATACAT+AGG + tig0004652:5864-5883 Msa1340910:intron 30.0%
CAAAAAAAGAAAATCGCAAG+AGG + tig0004652:5977-5996 Msa1340910:intron 30.0%
TTTAGATTTGGGAAATTCTG+TGG + tig0004652:6125-6144 Msa1340910:intron 30.0%
TAAATACTGTCATAAGAGAG+GGG - tig0004652:6241-6260 Msa1340910:intergenic 30.0%
! AATGTTCTGTTTCTTAGTTC+GGG - tig0004652:6403-6422 Msa1340910:intergenic 30.0%
ACAGAACATTATTGAGTCAA+AGG + tig0004652:6413-6432 Msa1340910:intron 30.0%
CAGAACATTATTGAGTCAAA+GGG + tig0004652:6414-6433 Msa1340910:intron 30.0%
CTTAATTTATGCACACTTTC+AGG + tig0004652:6497-6516 Msa1340910:intron 30.0%
! CGCAATCTTTTAAATTTACC+TGG + tig0004652:6613-6632 Msa1340910:intron 30.0%
TATCAAACAATCTTAGTTCC+AGG - tig0004652:6634-6653 Msa1340910:intergenic 30.0%
AAAACACAAATGGTTGAATG+GGG - tig0004652:6845-6864 Msa1340910:intergenic 30.0%
CAAAACACAAATGGTTGAAT+GGG - tig0004652:6846-6865 Msa1340910:intergenic 30.0%
TCAAAACACAAATGGTTGAA+TGG - tig0004652:6847-6866 Msa1340910:intergenic 30.0%
!! TGTCCATTTTTCTATTTCAC+AGG + tig0004652:6974-6993 Msa1340910:intron 30.0%
!!! CCTAATTGTACTTTTTCCAA+AGG - tig0004652:7015-7034 Msa1340910:intergenic 30.0%
! CCTTTGGAAAAAGTACAATT+AGG + tig0004652:7012-7031 Msa1340910:CDS 30.0%
!! GTTTTAAATGTGGTTTACTG+TGG - tig0004652:7148-7167 Msa1340910:intergenic 30.0%
! TAAACCACATTTAAAACTCG+AGG + tig0004652:7151-7170 Msa1340910:CDS 30.0%
!! TTACAAACCTTCTAGGATAA+AGG - tig0004652:7279-7298 Msa1340910:intergenic 30.0%
TATGTTATCAGATTCTTAGC+TGG + tig0004652:7500-7519 Msa1340910:three_prime_UTR 30.0%
! CTTCAATTTTCAGACATCAT+TGG - tig0004652:7951-7970 Msa1340910:intergenic 30.0%
ACTTCAGAAGGAAACGATAA+TGG + tig0004652:95-114 Msa1340910:exon 35.0%
!! GAAACGATAATGGTGGTTTT+TGG + tig0004652:105-124 Msa1340910:exon 35.0%
AGAGAAGGAATAGAAACTCA+CGG - tig0004652:385-404 Msa1340910:intergenic 35.0%
CTTTCTGCAAATGCTGAATT+TGG + tig0004652:403-422 Msa1340910:intron 35.0%
CTGAATTTGGTTACTCTGAA+GGG + tig0004652:416-435 Msa1340910:intron 35.0%
!! CACGTAGTTCTGTTACTTTA+TGG + tig0004652:504-523 Msa1340910:intron 35.0%
CATATACTTGTAAGCGTTTC+TGG - tig0004652:773-792 Msa1340910:intergenic 35.0%
GTTGTTTGATACGAATTTGC+TGG + tig0004652:801-820 Msa1340910:intron 35.0%
ACGATATAGAAAAACTCACC+AGG - tig0004652:1039-1058 Msa1340910:intergenic 35.0%
!! AATCTTCAAGGAAGGTATCA+AGG - tig0004652:1119-1138 Msa1340910:intergenic 35.0%
CCGAAATTCATCAATCTTCA+AGG - tig0004652:1131-1150 Msa1340910:intergenic 35.0%
CAGTTGTCAATCATGATTGA+AGG - tig0004652:1155-1174 Msa1340910:intergenic 35.0%
TGGTTTATGCCTTCCATATT+TGG + tig0004652:1185-1204 Msa1340910:intron 35.0%
!!! ATTTTTGGAACTTGGGAGAA+AGG - tig0004652:1222-1241 Msa1340910:intergenic 35.0%
CCGAAATTCATCAATCTTCA+AGG - tig0004652:1131-1150 Msa1340910:intergenic 35.0%
CAGTTGTCAATCATGATTGA+AGG - tig0004652:1155-1174 Msa1340910:intergenic 35.0%
TGGTTTATGCCTTCCATATT+TGG + tig0004652:1185-1204 Msa1340910:intron 35.0%
!!! ATTTTTGGAACTTGGGAGAA+AGG - tig0004652:1222-1241 Msa1340910:intergenic 35.0%
GTTACTTATCTTACTCCCTT+TGG + tig0004652:1509-1528 Msa1340910:intron 35.0%
! AGTTGTGCTGATACTAATGT+TGG + tig0004652:1551-1570 Msa1340910:CDS 35.0%
GAAGGGAAATATATCTCCAA+TGG + tig0004652:1894-1913 Msa1340910:intron 35.0%
CAAAAATTAAGGGATCATGG+AGG - tig0004652:2047-2066 Msa1340910:intergenic 35.0%
! CTCCATGATCCCTTAATTTT+TGG + tig0004652:2045-2064 Msa1340910:intron 35.0%
!! TATGAAGTGTCGTAAATTGG+AGG - tig0004652:2119-2138 Msa1340910:intergenic 35.0%
GACTCCCTAAACAAATCAAA+TGG - tig0004652:2205-2224 Msa1340910:intergenic 35.0%
TTTCTAACACTGACCTATAC+TGG + tig0004652:2254-2273 Msa1340910:intron 35.0%
TTCTAACACTGACCTATACT+GGG + tig0004652:2255-2274 Msa1340910:intron 35.0%
! CTTTGAAAATTGACCACACA+TGG - tig0004652:2444-2463 Msa1340910:intergenic 35.0%
TGACGTACTTCTCAAAATTC+GGG + tig0004652:2703-2722 Msa1340910:CDS 35.0%
!! CTAGATTTCTTGGCTTTTCA+AGG - tig0004652:2937-2956 Msa1340910:intergenic 35.0%
! AGTCAAGCCACTATTTTATG+TGG + tig0004652:3140-3159 Msa1340910:intron 35.0%
TCGTACACCACATAAAATAG+TGG - tig0004652:3150-3169 Msa1340910:intergenic 35.0%
! ACTATTTTATGTGGTGTACG+AGG + tig0004652:3149-3168 Msa1340910:intron 35.0%
! CTATTTTATGTGGTGTACGA+GGG + tig0004652:3150-3169 Msa1340910:intron 35.0%
GAGAAAGAGATCATGTGTTT+GGG - tig0004652:3416-3435 Msa1340910:intergenic 35.0%
TCCTCTCAAAAAAGGATCAA+TGG + tig0004652:3649-3668 Msa1340910:CDS 35.0%
CCTCTCAAAAAAGGATCAAT+GGG + tig0004652:3650-3669 Msa1340910:CDS 35.0%
!! TTCTCTTTCTACTTTTCGAG+AGG - tig0004652:3741-3760 Msa1340910:intergenic 35.0%
AATTTCGGTTGCTTCTTAGA+CGG + tig0004652:3806-3825 Msa1340910:CDS 35.0%
CTTATTGAAATGGCTGAACT+TGG + tig0004652:3869-3888 Msa1340910:intron 35.0%
TTCTACACTCAGTCTTCTAT+TGG - tig0004652:4037-4056 Msa1340910:intergenic 35.0%
GTGTTAAAGGAAGACTTATG+AGG + tig0004652:4073-4092 Msa1340910:intron 35.0%
TGTCTAATATCTAGTGACCA+GGG - tig0004652:4248-4267 Msa1340910:intergenic 35.0%
ATTGCATCAGCAGTTATCTT+TGG + tig0004652:4422-4441 Msa1340910:CDS 35.0%
TTGCATCAGCAGTTATCTTT+GGG + tig0004652:4423-4442 Msa1340910:CDS 35.0%
GACTTCAATACAAGACAGAA+TGG + tig0004652:4475-4494 Msa1340910:CDS 35.0%
CTTCAATACAAGACAGAATG+GGG + tig0004652:4477-4496 Msa1340910:CDS 35.0%
CCTATGAGAAATAATCTTGC+AGG - tig0004652:4531-4550 Msa1340910:intergenic 35.0%
! CCTGCAAGATTATTTCTCAT+AGG + tig0004652:4528-4547 Msa1340910:intron 35.0%
TTTATGGAGTTAGGAAATGG+TGG + tig0004652:4637-4656 Msa1340910:intron 35.0%
AATAGGTCTCCATAGAAATG+GGG - tig0004652:4750-4769 Msa1340910:intergenic 35.0%
GAATAGGTCTCCATAGAAAT+GGG - tig0004652:4751-4770 Msa1340910:intergenic 35.0%
GACCATCAATTAATTGTGCT+GGG + tig0004652:5195-5214 Msa1340910:intron 35.0%
ATCCCAGCACAATTAATTGA+TGG - tig0004652:5200-5219 Msa1340910:intergenic 35.0%
GAACTCAAGTCTACTAGATT+AGG - tig0004652:5231-5250 Msa1340910:intergenic 35.0%
GTTTGCCTTCCTTAATTACA+TGG + tig0004652:5357-5376 Msa1340910:intron 35.0%
GTCATCCATGTAATTAAGGA+AGG - tig0004652:5365-5384 Msa1340910:intergenic 35.0%
ATTACATGGATGACATTCAC+AGG + tig0004652:5371-5390 Msa1340910:intron 35.0%
! GTTGATAGAGAACGTTCTAA+AGG + tig0004652:5465-5484 Msa1340910:CDS 35.0%
!! GTTTTCTAAACTATTGGCTG+AGG + tig0004652:5512-5531 Msa1340910:CDS 35.0%
GCAGCATTTCCATTAATGTT+TGG + tig0004652:5546-5565 Msa1340910:CDS 35.0%
TATACAGTGTCATGCAAGAA+AGG + tig0004652:5725-5744 Msa1340910:intron 35.0%
TTGTTTATTTATTTGGGCGG+TGG + tig0004652:5788-5807 Msa1340910:intron 35.0%
! TTCAAAATCCCAAAGGCATA+GGG + tig0004652:5847-5866 Msa1340910:intron 35.0%
CATCTAATCAGAGAAACACT+AGG - tig0004652:6323-6342 Msa1340910:intergenic 35.0%
CTAGTGTTTCTCTGATTAGA+TGG + tig0004652:6321-6340 Msa1340910:CDS 35.0%
ATTGATGCAAAGTCCTTGAA+AGG - tig0004652:6524-6543 Msa1340910:intergenic 35.0%
CTTTGCATCAATGAATTTCG+TGG + tig0004652:6532-6551 Msa1340910:CDS 35.0%
TGATATTCAAACTGGAGAAC+AGG + tig0004652:6582-6601 Msa1340910:CDS 35.0%
!! AGTGAAAGCATTTCTATTCC+AGG - tig0004652:6780-6799 Msa1340910:intergenic 35.0%
GATATACTGTCGATGTTTCT+TGG + tig0004652:6888-6907 Msa1340910:intron 35.0%
GTGCCTGTGAAATAGAAAAA+TGG - tig0004652:6980-6999 Msa1340910:intergenic 35.0%
!! ATTTGGGCTTGTTTTTCTCA+AGG - tig0004652:7097-7116 Msa1340910:intergenic 35.0%
!! GTTTCAAGTTGCTGGTATTT+GGG - tig0004652:7113-7132 Msa1340910:intergenic 35.0%
!! TGTTTCAAGTTGCTGGTATT+TGG - tig0004652:7114-7133 Msa1340910:intergenic 35.0%
!!! AACTCCTCGAGTTTTAAATG+TGG - tig0004652:7158-7177 Msa1340910:intergenic 35.0%
TAGAAGGTTTGTAATCAGCT+GGG + tig0004652:7285-7304 Msa1340910:exon 35.0%
GTAGAGTGATATCTTTGCAA+AGG + tig0004652:7369-7388 Msa1340910:three_prime_UTR 35.0%
!! TGGTCTTGTTCTATAGGAAA+AGG - tig0004652:7421-7440 Msa1340910:intergenic 35.0%
!! TGATTGTGGTCTTGTTCTAT+AGG - tig0004652:7427-7446 Msa1340910:intergenic 35.0%
GATTTCCACGATGTCATTAT+CGG + tig0004652:7449-7468 Msa1340910:three_prime_UTR 35.0%
GTAATAGTAAACTGTGACAG+TGG + tig0004652:7525-7544 Msa1340910:three_prime_UTR 35.0%
!! AAGCGACACTCATTTTGAAA+CGG - tig0004652:7604-7623 Msa1340910:intergenic 35.0%
! AATTGGAGGGTACAATTGAA+AGG - tig0004652:7691-7710 Msa1340910:intergenic 35.0%
! TATTCAGTGATAGGAGTATG+TGG + tig0004652:7875-7894 Msa1340910:three_prime_UTR 35.0%
TGATGTCTGAAAATTGAAGC+AGG + tig0004652:7952-7971 Msa1340910:three_prime_UTR 35.0%
CGAACAGAGAAATGAGAATG+AGG - tig0004652:34-53 None:intergenic 40.0%
GTCACTTCAGAAACTTCAGA+AGG + tig0004652:83-102 Msa1340910:five_prime_UTR 40.0%
! TCAGAAGGAAACGATAATGG+TGG + tig0004652:98-117 Msa1340910:exon 40.0%
AAGGTTCATCAAATCGTCAC+CGG + tig0004652:135-154 Msa1340910:CDS 40.0%
GATACGAACAAGGAAAGAGA+CGG - tig0004652:202-221 Msa1340910:intergenic 40.0%
TCAGCATTTGCAGAAAGAGA+AGG - tig0004652:400-419 Msa1340910:intergenic 40.0%
GCTGAATTTGGTTACTCTGA+AGG + tig0004652:415-434 Msa1340910:intron 40.0%
! TTAGCAATAATGGGACCTTC+AGG + tig0004652:646-665 Msa1340910:CDS 40.0%
ACATTGCTCAATGTTCTTGC+TGG + tig0004652:682-701 Msa1340910:CDS 40.0%
! GCTTCATTTGAGTGGTCTTT+TGG + tig0004652:726-745 Msa1340910:CDS 40.0%
!!! AGTGGTCTTTTGGAGTTCAA+TGG + tig0004652:736-755 Msa1340910:CDS 40.0%
!! TTGTAAGCGTTTCTGGAACT+CGG - tig0004652:766-785 Msa1340910:intergenic 40.0%
! TAGGTTTGCTTATGTGAGAC+AGG + tig0004652:886-905 Msa1340910:intron 40.0%
TCACAACATATCTTCTGCCA+AGG + tig0004652:973-992 Msa1340910:CDS 40.0%
AGCAAGCATCCAAATATGGA+AGG - tig0004652:1197-1216 Msa1340910:intergenic 40.0%
!! CTTCAAGGAAGGTATCAAGT+AGG - tig0004652:1288-1307 Msa1340910:intergenic 40.0%
AGCAAGCATCCAAATATGGA+AGG - tig0004652:1197-1216 Msa1340910:intergenic 40.0%
TTAAGCACACAGATGCCAAA+GGG - tig0004652:1527-1546 Msa1340910:intergenic 40.0%
CATGCAGAATTGCTTTGCAT+TGG + tig0004652:1692-1711 Msa1340910:intron 40.0%
AATAGTTAGTTACTCGGAGG+GGG - tig0004652:2001-2020 Msa1340910:intergenic 40.0%
GAATAGTTAGTTACTCGGAG+GGG - tig0004652:2002-2021 Msa1340910:intergenic 40.0%
GGAATAGTTAGTTACTCGGA+GGG - tig0004652:2003-2022 Msa1340910:intergenic 40.0%
TGGAATAGTTAGTTACTCGG+AGG - tig0004652:2004-2023 Msa1340910:intergenic 40.0%
GCAGGAAAATACCCTTTGTA+AGG - tig0004652:2148-2167 Msa1340910:intergenic 40.0%
TCTAACACTGACCTATACTG+GGG + tig0004652:2256-2275 Msa1340910:intron 40.0%
!! ACACTATAGGTTGATGCACA+AGG - tig0004652:2299-2318 Msa1340910:intergenic 40.0%
GACATTGTCTTGCTAACTGA+TGG + tig0004652:2642-2661 Msa1340910:CDS 40.0%
TAAGTACTCCAACACTTGAG+AGG - tig0004652:2783-2802 Msa1340910:intergenic 40.0%
GTTGACTGAACAAATGCAGA+AGG - tig0004652:3394-3413 Msa1340910:intergenic 40.0%
GGAGAAAGAGATCATGTGTT+TGG - tig0004652:3417-3436 Msa1340910:intergenic 40.0%
GATTAACATGATCTGAGCAG+TGG - tig0004652:3570-3589 Msa1340910:intergenic 40.0%
GTCAGAAGAACTGTAGTCTA+TGG - tig0004652:3620-3639 Msa1340910:intergenic 40.0%
!!! CCCATTGATCCTTTTTTGAG+AGG - tig0004652:3653-3672 Msa1340910:intergenic 40.0%
! GAGAGGTCATCTAGAGTAAT+TGG - tig0004652:3724-3743 Msa1340910:intergenic 40.0%
GTAGAAAGAGAATCAGCAAG+AGG + tig0004652:3749-3768 Msa1340910:CDS 40.0%
AGGACTGTAGCAAAAACGAA+AGG + tig0004652:3769-3788 Msa1340910:CDS 40.0%
GGACTGTAGCAAAAACGAAA+GGG + tig0004652:3770-3789 Msa1340910:CDS 40.0%
GACTGTAGCAAAAACGAAAG+GGG + tig0004652:3771-3790 Msa1340910:CDS 40.0%
ACTGTAGCAAAAACGAAAGG+GGG + tig0004652:3772-3791 Msa1340910:CDS 40.0%
ATTTCGGTTGCTTCTTAGAC+GGG + tig0004652:3807-3826 Msa1340910:CDS 40.0%
ATTGCATGATGAGTAGTGCT+AGG + tig0004652:3896-3915 Msa1340910:intron 40.0%
ATAACAGAGCGAGTGTTAGA+AGG - tig0004652:3940-3959 Msa1340910:intergenic 40.0%
TCTAACACTCGCTCTGTTAT+TGG + tig0004652:3940-3959 Msa1340910:intron 40.0%
CTAACACTCGCTCTGTTATT+GGG + tig0004652:3941-3960 Msa1340910:intron 40.0%
TGTTATTGGGCAAAACCACA+TGG + tig0004652:3954-3973 Msa1340910:intron 40.0%
GTTATTGGGCAAAACCACAT+GGG + tig0004652:3955-3974 Msa1340910:intron 40.0%
TAGGTCCCACATAAATTGTG+GGG - tig0004652:3981-4000 Msa1340910:intergenic 40.0%
GTAGGTCCCACATAAATTGT+GGG - tig0004652:3982-4001 Msa1340910:intergenic 40.0%
!! GGACCTACCTCTAAAATTGT+GGG + tig0004652:3994-4013 Msa1340910:intron 40.0%
CTGTCTAATATCTAGTGACC+AGG - tig0004652:4249-4268 Msa1340910:intergenic 40.0%
TATATCTTGCAGTCGGTGTA+TGG + tig0004652:4302-4321 Msa1340910:intron 40.0%
TCATGATTCTCTGTCTGACT+AGG + tig0004652:4355-4374 Msa1340910:intron 40.0%
ATGCACCTACCAACAAAGTT+CGG + tig0004652:4387-4406 Msa1340910:CDS 40.0%
!!! TGGGTCAGTTTTTTGGAGAA+TGG + tig0004652:4442-4461 Msa1340910:CDS 40.0%
!!! GGGTCAGTTTTTTGGAGAAT+GGG + tig0004652:4443-4462 Msa1340910:CDS 40.0%
TAGTCTTTCCCCCATTTCTA+TGG + tig0004652:4738-4757 Msa1340910:intron 40.0%
ATAGGTCTCCATAGAAATGG+GGG - tig0004652:4749-4768 Msa1340910:intergenic 40.0%
GGAATAGGTCTCCATAGAAA+TGG - tig0004652:4752-4771 Msa1340910:intergenic 40.0%
AGACCTATTCCTTCTCGAAT+AGG + tig0004652:4761-4780 Msa1340910:intron 40.0%
ACTCCTATTCGAGAAGGAAT+AGG - tig0004652:4767-4786 Msa1340910:intergenic 40.0%
! CGTGCTGTTAATATGCATCA+CGG + tig0004652:4814-4833 Msa1340910:intron 40.0%
! TCGTATATCATTGGCTGTTG+TGG + tig0004652:4921-4940 Msa1340910:intron 40.0%
! TTTTTAGATGCCATGCTGTG+TGG + tig0004652:5005-5024 Msa1340910:intron 40.0%
GGACCATCAATTAATTGTGC+TGG + tig0004652:5194-5213 Msa1340910:intron 40.0%
TGCTGCTATAAACACAGCTA+TGG + tig0004652:5395-5414 Msa1340910:CDS 40.0%
TCAACAATTGACCGTTCCTT+CGG - tig0004652:5450-5469 Msa1340910:intergenic 40.0%
! TTCTAAAGGCTCCTATTCCT+TGG + tig0004652:5479-5498 Msa1340910:CDS 40.0%
TCTAAAGGCTCCTATTCCTT+GGG + tig0004652:5480-5499 Msa1340910:CDS 40.0%
AATGGAAATGCTGCTCCAAT+GGG - tig0004652:5540-5559 Msa1340910:intergenic 40.0%
TAATGGAAATGCTGCTCCAA+TGG - tig0004652:5541-5560 Msa1340910:intergenic 40.0%
!!! TGGTGCTGTTTTATACCCAA+TGG + tig0004652:5566-5585 Msa1340910:CDS 40.0%
CTAACCTCATTAAAGTGGGA+TGG - tig0004652:5599-5618 Msa1340910:intergenic 40.0%
!!! GCTTGTTTTTTGGGTAGTGT+AGG + tig0004652:5681-5700 Msa1340910:intron 40.0%
! GTTCAAAATCCCAAAGGCAT+AGG + tig0004652:5846-5865 Msa1340910:intron 40.0%
! TCAAAATCCCAAAGGCATAG+GGG + tig0004652:5848-5867 Msa1340910:intron 40.0%
ATGTATACCCCTATGCCTTT+GGG - tig0004652:5858-5877 Msa1340910:intergenic 40.0%
TATGTATACCCCTATGCCTT+TGG - tig0004652:5859-5878 Msa1340910:intergenic 40.0%
! AGATGATTGGGGTATTCTCA+GGG - tig0004652:6289-6308 Msa1340910:intergenic 40.0%
! AAGATGATTGGGGTATTCTC+AGG - tig0004652:6290-6309 Msa1340910:intergenic 40.0%
TTGTCAGACTCTCATACCAA+TGG + tig0004652:6467-6486 Msa1340910:intron 40.0%
GTGAATAAACTGAACCTGTG+AGG + tig0004652:6695-6714 Msa1340910:intron 40.0%
AACTGATATCATAGCCTCAC+AGG - tig0004652:6712-6731 Msa1340910:intergenic 40.0%
TACTGTAATTTAGCTGCTCC+TGG + tig0004652:6759-6778 Msa1340910:intron 40.0%
! GTTTTTCTCAAGGAGAAGGT+AGG - tig0004652:7087-7106 Msa1340910:intergenic 40.0%
!! GCTTGTTTTTCTCAAGGAGA+AGG - tig0004652:7091-7110 Msa1340910:intergenic 40.0%
AAATGTGGTTTACTGTGGTC+AGG - tig0004652:7143-7162 Msa1340910:intergenic 40.0%
! TGTGTCTGATCAACTTGTTC+AGG - tig0004652:7185-7204 Msa1340910:intergenic 40.0%
CTAGGATAAAGGAGCCAATA+GGG - tig0004652:7268-7287 Msa1340910:intergenic 40.0%
! TCTAGGATAAAGGAGCCAAT+AGG - tig0004652:7269-7288 Msa1340910:intergenic 40.0%
! ATTGGCTCCTTTATCCTAGA+AGG + tig0004652:7269-7288 Msa1340910:CDS 40.0%
CAGCTGATTACAAACCTTCT+AGG - tig0004652:7286-7305 Msa1340910:intergenic 40.0%
CTAGAAGGTTTGTAATCAGC+TGG + tig0004652:7284-7303 Msa1340910:exon 40.0%
ATCGTGGAAATCAGTGATTG+TGG - tig0004652:7441-7460 Msa1340910:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - tig0004652:7843-7862 Msa1340910:intergenic 40.0%
CGTGCTGAGTATTAATTGGA+GGG - tig0004652:7704-7723 Msa1340910:intergenic 40.0%
GTAGCGTGCTGAGTATTAAT+TGG - tig0004652:7708-7727 Msa1340910:intergenic 40.0%
!!! TGACACTCATTTTGAAACGG+AGG + tig0004652:7842-7861 Msa1340910:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + tig0004652:7843-7862 Msa1340910:intron 40.0%
!!! CGATAATGGTGGTTTTTGGC+TGG + tig0004652:109-128 Msa1340910:exon 45.0%
!!! GGTGGTTTTTGGCTGGAAAA+AGG + tig0004652:116-135 Msa1340910:CDS 45.0%
GTGCAGAGAAGATACGAACA+AGG - tig0004652:212-231 Msa1340910:intergenic 45.0%
GACGATGCTTCAATCAACGA+CGG + tig0004652:270-289 Msa1340910:CDS 45.0%
!! TTGTTCCAACGGATTGTGAC+CGG - tig0004652:327-346 Msa1340910:intergenic 45.0%
ATAGAAACTCACGGACTTGG+AGG - tig0004652:376-395 Msa1340910:intergenic 45.0%
GGAATAGAAACTCACGGACT+TGG - tig0004652:379-398 Msa1340910:intergenic 45.0%
TCTGAGTGGAGAAGCAAAAC+CGG + tig0004652:615-634 Msa1340910:CDS 45.0%
! ATAATGGGACCTTCAGGTTC+AGG + tig0004652:652-671 Msa1340910:CDS 45.0%
! TAATGGGACCTTCAGGTTCA+GGG + tig0004652:653-672 Msa1340910:CDS 45.0%
GTTTGCTTATGTGAGACAGG+AGG + tig0004652:889-908 Msa1340910:CDS 45.0%
TCTTCTCACAGCTTACTGTG+CGG + tig0004652:918-937 Msa1340910:CDS 45.0%
ACATATCTTCTGCCAAGGAG+AGG + tig0004652:978-997 Msa1340910:CDS 45.0%
CATATCTTCTGCCAAGGAGA+GGG + tig0004652:979-998 Msa1340910:CDS 45.0%
GACATATTCATCCCTCTCCT+TGG - tig0004652:993-1012 Msa1340910:intergenic 45.0%
! TCTCCTTTTCAAAACAGGCC+TGG + tig0004652:1018-1037 Msa1340910:CDS 45.0%
!!! TCACCAGGCCTGTTTTGAAA+AGG - tig0004652:1024-1043 Msa1340910:intergenic 45.0%
TTCAGTCGCAAAGTAGTTGC+TGG + tig0004652:1068-1087 Msa1340910:intron 45.0%
CTTAAGCACACAGATGCCAA+AGG - tig0004652:1528-1547 Msa1340910:intergenic 45.0%
CTTTGGCATCTGTGTGCTTA+AGG + tig0004652:1526-1545 Msa1340910:intron 45.0%
!! GTTGGTGATGCAAAAGTTCG+TGG + tig0004652:1569-1588 Msa1340910:CDS 45.0%
GCAAAAGTTCGTGGAATCAG+TGG + tig0004652:1578-1597 Msa1340910:CDS 45.0%
AAAGTTCGTGGAATCAGTGG+TGG + tig0004652:1581-1600 Msa1340910:CDS 45.0%
TTTGCTGATGAACCCACAAC+AGG + tig0004652:1659-1678 Msa1340910:CDS 45.0%
TGTGCATGCTTACCTGTTGT+GGG - tig0004652:1674-1693 Msa1340910:intergenic 45.0%
ATGTGCATGCTTACCTGTTG+TGG - tig0004652:1675-1694 Msa1340910:intergenic 45.0%
TTCACAACTGAGCACTTGCT+TGG + tig0004652:1925-1944 Msa1340910:intron 45.0%
! GGTATTTTCCTGCATACCCA+AGG + tig0004652:2155-2174 Msa1340910:intron 45.0%
AATCAACTCCTTGGGTATGC+AGG - tig0004652:2166-2185 Msa1340910:intergenic 45.0%
CTAACACTGACCTATACTGG+GGG + tig0004652:2257-2276 Msa1340910:intron 45.0%
TAACACTGACCTATACTGGG+GGG + tig0004652:2258-2277 Msa1340910:intron 45.0%
TTTCCATAACCTTCTCAGCC+TGG - tig0004652:2539-2558 Msa1340910:intergenic 45.0%
GACCATCAAGTGCAAGTTGT+CGG - tig0004652:2566-2585 Msa1340910:intergenic 45.0%
TGCTCTATACATCAGCCAAG+AGG + tig0004652:2597-2616 Msa1340910:CDS 45.0%
TTGCTGTACACTGATCCTCT+TGG - tig0004652:2615-2634 Msa1340910:intergenic 45.0%
! GATGGTTCCCTTGTTTATGC+TGG + tig0004652:2660-2679 Msa1340910:CDS 45.0%
AGCAGGACCAGCATAAACAA+GGG - tig0004652:2670-2689 Msa1340910:intergenic 45.0%
AGATCGGCCAAAAATTCTGC+AGG - tig0004652:3592-3611 Msa1340910:intergenic 45.0%
ATGGGCCCCACAATTTATGT+GGG + tig0004652:3973-3992 Msa1340910:intron 45.0%
GGTAGGTCCCACATAAATTG+TGG - tig0004652:3983-4002 Msa1340910:intergenic 45.0%
!! GGGACCTACCTCTAAAATTG+TGG + tig0004652:3993-4012 Msa1340910:intron 45.0%
!! GGTCCCACAATTTTAGAGGT+AGG - tig0004652:4000-4019 Msa1340910:intergenic 45.0%
! TGTGGGTCCCACAATTTTAG+AGG - tig0004652:4004-4023 Msa1340910:intergenic 45.0%
TATTCTTTACCTCTGGACCC+TGG + tig0004652:4228-4247 Msa1340910:intron 45.0%
! TTTGTTGGTAGGTGCATCAC+GGG - tig0004652:4384-4403 Msa1340910:intergenic 45.0%
! CTTTGTTGGTAGGTGCATCA+CGG - tig0004652:4385-4404 Msa1340910:intergenic 45.0%
CTTGACCGAACTTTGTTGGT+AGG - tig0004652:4395-4414 Msa1340910:intergenic 45.0%
CTACCAACAAAGTTCGGTCA+AGG + tig0004652:4393-4412 Msa1340910:CDS 45.0%
CATCCTTGACCGAACTTTGT+TGG - tig0004652:4399-4418 Msa1340910:intergenic 45.0%
TAGTCAAAAGCCACACAGCA+TGG - tig0004652:5018-5037 Msa1340910:intergenic 45.0%
TGGGTGTATTTCCGAAGGAA+CGG + tig0004652:5436-5455 Msa1340910:CDS 45.0%
GTCTCCATCCCACTTTAATG+AGG + tig0004652:5592-5611 Msa1340910:CDS 45.0%
GAAAAGAGACAGCGACATAG+AGG - tig0004652:6016-6035 Msa1340910:intergenic 45.0%
! TACTGTCATTGCTGCTTCAG+TGG - tig0004652:6216-6235 Msa1340910:intergenic 45.0%
ACTGAAGCAGCAATGACAGT+AGG + tig0004652:6215-6234 Msa1340910:CDS 45.0%
AATCCAGCGGAAGATGATTG+GGG - tig0004652:6300-6319 Msa1340910:intergenic 45.0%
GAATCCAGCGGAAGATGATT+GGG - tig0004652:6301-6320 Msa1340910:intergenic 45.0%
GAGAAACACTAGGAATCCAG+CGG - tig0004652:6313-6332 Msa1340910:intergenic 45.0%
TTCAAACTGGAGAACAGGTG+AGG + tig0004652:6587-6606 Msa1340910:intron 45.0%
TTCACTTCACTCATACGTCC+TGG - tig0004652:6680-6699 Msa1340910:intergenic 45.0%
TTTCTCAAGGAGAAGGTAGG+TGG - tig0004652:7084-7103 Msa1340910:intergenic 45.0%
!! GAGGTGTTGTTTCAAGTTGC+TGG - tig0004652:7121-7140 Msa1340910:intergenic 45.0%
TCTACTTCAGGTGACTCAAG+GGG - tig0004652:7245-7264 Msa1340910:intergenic 45.0%
GTCTACTTCAGGTGACTCAA+GGG - tig0004652:7246-7265 Msa1340910:intergenic 45.0%
TCACCTGAAGTAGACCCTAT+TGG + tig0004652:7251-7270 Msa1340910:CDS 45.0%
GATGTCCGATAATGACATCG+TGG - tig0004652:7457-7476 Msa1340910:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - tig0004652:7601-7620 Msa1340910:intergenic 45.0%
GCGTGCTGAGTATTAATTGG+AGG - tig0004652:7705-7724 Msa1340910:intergenic 45.0%
GTCTGAAAATTGAAGCAGGC+AGG + tig0004652:7956-7975 Msa1340910:three_prime_UTR 45.0%
!! ATATTATATATACTTTATAT+AGG + tig0004652:4603-4622 Msa1340910:intron 5.0%
!! TGAAAATAATTAAATATTAT+GGG + tig0004652:5172-5191 Msa1340910:intron 5.0%
!! CATCAAATCGTCACCGGCTT+CGG + tig0004652:141-160 Msa1340910:CDS 50.0%
AACAAGGAAAGAGACGGCGA+CGG - tig0004652:196-215 Msa1340910:intergenic 50.0%
GTTCGTATCTTCTCTGCACC+CGG + tig0004652:213-232 Msa1340910:CDS 50.0%
TCATCGTCATCGTCGTTCTC+CGG - tig0004652:252-271 Msa1340910:intergenic 50.0%
TTCCACCGGAAAGGTTACTC+CGG + tig0004652:305-324 Msa1340910:CDS 50.0%
TGTGACCGGAGTAACCTTTC+CGG - tig0004652:313-332 Msa1340910:intergenic 50.0%
TTACTCCGGTCACAATCCGT+TGG + tig0004652:319-338 Msa1340910:CDS 50.0%
CTGAGTGGAGAAGCAAAACC+GGG + tig0004652:616-635 Msa1340910:CDS 50.0%
GTTGTCTTCCCTGAACCTGA+AGG - tig0004652:664-683 Msa1340910:intergenic 50.0%
TCACCTCGGCTTCATTTGAG+TGG + tig0004652:718-737 Msa1340910:CDS 50.0%
AGACCACTCAAATGAAGCCG+AGG - tig0004652:724-743 Msa1340910:intergenic 50.0%
CTTCTCACAGCTTACTGTGC+GGG + tig0004652:919-938 Msa1340910:CDS 50.0%
GGCGAGCAAGCATCCAAATA+TGG - tig0004652:1201-1220 Msa1340910:intergenic 50.0%
GGCGAGCAAGCATCCAAATA+TGG - tig0004652:1201-1220 Msa1340910:intergenic 50.0%
TGCAAGCAGTTCACATGCCA+AGG - tig0004652:1624-1643 Msa1340910:intergenic 50.0%
AACACTGACCTATACTGGGG+GGG + tig0004652:2259-2278 Msa1340910:intron 50.0%
CATGGCAGCAGTAAATGGCA+AGG - tig0004652:2426-2445 Msa1340910:intergenic 50.0%
CCACACATGGCAGCAGTAAA+TGG - tig0004652:2431-2450 Msa1340910:intergenic 50.0%
CCATTTACTGCTGCCATGTG+TGG + tig0004652:2428-2447 Msa1340910:intron 50.0%
TGGAGAGAGAGAGAGAGAGA+GGG - tig0004652:2476-2495 Msa1340910:intergenic 50.0%
TTCAGGACTTGATGCCTTCC+AGG + tig0004652:2518-2537 Msa1340910:intron 50.0%
CATAACCTTCTCAGCCTGGA+AGG - tig0004652:2535-2554 Msa1340910:intergenic 50.0%
CTTCCAGGCTGAGAAGGTTA+TGG + tig0004652:2533-2552 Msa1340910:CDS 50.0%
CTCCGACAACTTGCACTTGA+TGG + tig0004652:2561-2580 Msa1340910:CDS 50.0%
CAGCAGGACCAGCATAAACA+AGG - tig0004652:2671-2690 Msa1340910:intergenic 50.0%
CTTGTTTATGCTGGTCCTGC+TGG + tig0004652:2669-2688 Msa1340910:CDS 50.0%
GTCAATGGTTCATCACCAGC+AGG - tig0004652:2687-2706 Msa1340910:intergenic 50.0%
TTGGGGATCCTCTCAAGTGT+TGG + tig0004652:2772-2791 Msa1340910:intron 50.0%
TAGCAAAAACGAAAGGGGGC+TGG + tig0004652:3776-3795 Msa1340910:CDS 50.0%
CATAAATTGTGGGGCCCATG+TGG - tig0004652:3972-3991 Msa1340910:intergenic 50.0%
CATGGGCCCCACAATTTATG+TGG + tig0004652:3972-3991 Msa1340910:intron 50.0%
AGACAGAATGGGGTTGCTTC+AGG + tig0004652:4487-4506 Msa1340910:CDS 50.0%
GCTGCTCTCACAAAGACTGT+GGG + tig0004652:5417-5436 Msa1340910:CDS 50.0%
GACTGTGGGTGTATTTCCGA+AGG + tig0004652:5431-5450 Msa1340910:CDS 50.0%
AGAAAACAGATAGGGGCCCA+AGG - tig0004652:5499-5518 Msa1340910:intergenic 50.0%
TTTGTGTCTTTGTCGTCGCG+AGG + tig0004652:6046-6065 Msa1340910:intron 50.0%
TTGTGTCTTTGTCGTCGCGA+GGG + tig0004652:6047-6066 Msa1340910:intron 50.0%
ATCCTTTGCTGCATCTGCGA+TGG + tig0004652:6163-6182 Msa1340910:CDS 50.0%
TCCTTTGCTGCATCTGCGAT+GGG + tig0004652:6164-6183 Msa1340910:CDS 50.0%
GGTTGGAACCATAGCACCAA+CGG - tig0004652:6195-6214 Msa1340910:intergenic 50.0%
! GTCATTGCTGCTTCAGTGGT+TGG - tig0004652:6212-6231 Msa1340910:intergenic 50.0%
ATACCCCAATCATCTTCCGC+TGG + tig0004652:6294-6313 Msa1340910:CDS 50.0%
GGAATCCAGCGGAAGATGAT+TGG - tig0004652:6302-6321 Msa1340910:intergenic 50.0%
CACACTTTCAGGGCCTTTCA+AGG + tig0004652:6508-6527 Msa1340910:intron 50.0%
! GCACTAGAGCGTCTTTCCTT+TGG + tig0004652:6996-7015 Msa1340910:CDS 50.0%
TGTGGTTTACTGTGGTCAGG+AGG - tig0004652:7140-7159 Msa1340910:intergenic 50.0%
! TCAGACACATGAAGCACCAG+AGG + tig0004652:7196-7215 Msa1340910:CDS 50.0%
!! AGAGGTCAGCCAAGTTGGTA+CGG + tig0004652:7214-7233 Msa1340910:CDS 50.0%
GGTCTACTTCAGGTGACTCA+AGG - tig0004652:7247-7266 Msa1340910:intergenic 50.0%
GAGCCAATAGGGTCTACTTC+AGG - tig0004652:7257-7276 Msa1340910:intergenic 50.0%
GCTCACTTCTCAGTAACTGC+AGG - tig0004652:7399-7418 Msa1340910:intergenic 50.0%
GGTGAAACTCCTCCTTCCAC+CGG + tig0004652:291-310 Msa1340910:CDS 55.0%
AACTCCTCCTTCCACCGGAA+AGG + tig0004652:296-315 Msa1340910:CDS 55.0%
GTAACCTTTCCGGTGGAAGG+AGG - tig0004652:303-322 Msa1340910:intergenic 55.0%
GGAGTAACCTTTCCGGTGGA+AGG - tig0004652:306-325 Msa1340910:intergenic 55.0%
GTCAGCTATCAGCGTCACCT+CGG + tig0004652:704-723 Msa1340910:CDS 55.0%
ACACTGACCTATACTGGGGG+GGG + tig0004652:2260-2279 Msa1340910:intron 55.0%
GGAGAGAGAGAGAGAGAGAG+GGG - tig0004652:2475-2494 Msa1340910:intergenic 55.0%
GTGGAGAGAGAGAGAGAGAG+AGG - tig0004652:2477-2496 Msa1340910:intergenic 55.0%
TGATGCCTTCCAGGCTGAGA+AGG + tig0004652:2527-2546 Msa1340910:CDS 55.0%
CAAAAACGAAAGGGGGCTGG+TGG + tig0004652:3779-3798 Msa1340910:CDS 55.0%
! GGGGCTGGTGGAAGCAATTT+CGG + tig0004652:3791-3810 Msa1340910:CDS 55.0%
GGTTGCTTCTTAGACGGGCA+TGG + tig0004652:3812-3831 Msa1340910:CDS 55.0%
TCTTAGACGGGCATGGATGC+AGG + tig0004652:3819-3838 Msa1340910:CDS 55.0%
ATCTAGTGACCAGGGTCCAG+AGG - tig0004652:4240-4259 Msa1340910:intergenic 55.0%
GGCTGCTCTCACAAAGACTG+TGG + tig0004652:5416-5435 Msa1340910:CDS 55.0%
CAGATAGGGGCCCAAGGAAT+AGG - tig0004652:5493-5512 Msa1340910:intergenic 55.0%
! CTATTGGCTGAGGCTCCCAT+TGG + tig0004652:5522-5541 Msa1340910:CDS 55.0%
! TGGGATGGAGACGTGCCATT+GGG - tig0004652:5584-5603 Msa1340910:intergenic 55.0%
ACCCATCGCAGATGCAGCAA+AGG - tig0004652:6168-6187 Msa1340910:intergenic 55.0%
TCTGCGATGGGTCTTACCGT+TGG + tig0004652:6176-6195 Msa1340910:CDS 55.0%
!! GGGTCTTACCGTTGGTGCTA+TGG + tig0004652:6184-6203 Msa1340910:CDS 55.0%
GTACCAACTTGGCTGACCTC+TGG - tig0004652:7215-7234 Msa1340910:intergenic 55.0%
!! CAAATCGTCACCGGCTTCGG+CGG + tig0004652:144-163 Msa1340910:CDS 60.0%
TCGTTCTCCGGCAAGAGAGC+GGG - tig0004652:240-259 Msa1340910:intergenic 60.0%
GTCGTTCTCCGGCAAGAGAG+CGG - tig0004652:241-260 Msa1340910:intergenic 60.0%
GACCGGAGTAACCTTTCCGG+TGG - tig0004652:310-329 Msa1340910:intergenic 60.0%
CACTGACCTATACTGGGGGG+GGG + tig0004652:2261-2280 Msa1340910:intron 60.0%
ACTGACCTATACTGGGGGGG+GGG + tig0004652:2262-2281 Msa1340910:intron 60.0%
GTGGGATGGAGACGTGCCAT+TGG - tig0004652:5585-5604 Msa1340910:intergenic 60.0%
GCACCAGAGGTCAGCCAAGT+TGG + tig0004652:7209-7228 Msa1340910:CDS 60.0%
GAAAGAGACGGCGACGGCGA+CGG - tig0004652:190-209 Msa1340910:intergenic 65.0%
CTGACCTATACTGGGGGGGG+GGG + tig0004652:2263-2282 Msa1340910:intron 65.0%
TGACCTATACTGGGGGGGGG+GGG + tig0004652:2264-2283 Msa1340910:intron 65.0%
GGGGCTCGTCCGTACCAACT+TGG - tig0004652:7226-7245 Msa1340910:intergenic 65.0%
!! GTCACCGGCTTCGGCGGAAG+CGG + tig0004652:150-169 Msa1340910:CDS 70.0%
AAGGCCGCTTCCGCCGAAGC+CGG - tig0004652:157-176 Msa1340910:intergenic 70.0%
ACCCGGTCCCGCTCTCTTGC+CGG + tig0004652:230-249 Msa1340910:CDS 70.0%
TCCGGCAAGAGAGCGGGACC+GGG - tig0004652:234-253 Msa1340910:intergenic 70.0%
CTCCGGCAAGAGAGCGGGAC+CGG - tig0004652:235-254 Msa1340910:intergenic 70.0%
GACCTATACTGGGGGGGGGG+GGG + tig0004652:2265-2284 Msa1340910:intron 70.0%
ACCTATACTGGGGGGGGGGG+GGG + tig0004652:2266-2285 Msa1340910:intron 70.0%
GGCTTCGGCGGAAGCGGCCT+TGG + tig0004652:156-175 Msa1340910:CDS 75.0%
CCTATACTGGGGGGGGGGGG+GGG + tig0004652:2267-2286 Msa1340910:intron 75.0%
CTATACTGGGGGGGGGGGGG+GGG + tig0004652:2268-2287 Msa1340910:intron 75.0%
TATACTGGGGGGGGGGGGGG+GGG + tig0004652:2269-2288 Msa1340910:intron 75.0%
! CGGCGACGGCGAGCTGGCCA+AGG - tig0004652:176-195 Msa1340910:intergenic 80.0%
! CCCCCCCCCCCCCCCAGTAT+AGG - tig0004652:2270-2289 Msa1340910:intergenic 80.0%
! ATACTGGGGGGGGGGGGGGG+GGG + tig0004652:2270-2289 Msa1340910:intron 80.0%
! CGGCGACGGCGACGGCGAGC+TGG - tig0004652:182-201 Msa1340910:intergenic 85.0%
! TACTGGGGGGGGGGGGGGGG+GGG + tig0004652:2271-2290 Msa1340910:intron 85.0%
Chromosome Type Strat End Strand Name
tig0004652 gene 4 7986 4 ID=Msa1340910;Name=Msa1340910
tig0004652 mRNA 4 7986 4 ID=Msa1340910-mRNA-1;Parent=Msa1340910;Name=Msa1340910-mRNA-1;_AED=0.09;_eAED=0.09;_QI=110|1|1|1|0.90|0.83|12|412|725
tig0004652 exon 4 383 4 ID=Msa1340910-mRNA-1:exon:2904;Parent=Msa1340910-mRNA-1
tig0004652 exon 595 785 595 ID=Msa1340910-mRNA-1:exon:2905;Parent=Msa1340910-mRNA-1
tig0004652 exon 889 1039 889 ID=Msa1340910-mRNA-1:exon:2906;Parent=Msa1340910-mRNA-1
tig0004652 exon 1548 1680 1548 ID=Msa1340910-mRNA-1:exon:2907;Parent=Msa1340910-mRNA-1
tig0004652 exon 2523 2724 2523 ID=Msa1340910-mRNA-1:exon:2908;Parent=Msa1340910-mRNA-1
tig0004652 exon 3564 3840 3564 ID=Msa1340910-mRNA-1:exon:2909;Parent=Msa1340910-mRNA-1
tig0004652 exon 4377 4508 4377 ID=Msa1340910-mRNA-1:exon:2910;Parent=Msa1340910-mRNA-1
tig0004652 exon 5393 5613 5393 ID=Msa1340910-mRNA-1:exon:2911;Parent=Msa1340910-mRNA-1
tig0004652 exon 6130 6342 6130 ID=Msa1340910-mRNA-1:exon:2912;Parent=Msa1340910-mRNA-1
tig0004652 exon 6519 6603 6519 ID=Msa1340910-mRNA-1:exon:2913;Parent=Msa1340910-mRNA-1
tig0004652 exon 6996 7587 6996 ID=Msa1340910-mRNA-1:exon:2914;Parent=Msa1340910-mRNA-1
tig0004652 exon 7864 7986 7864 ID=Msa1340910-mRNA-1:exon:2915;Parent=Msa1340910-mRNA-1
tig0004652 five_prime_UTR 4 113 4 ID=Msa1340910-mRNA-1:five_prime_utr;Parent=Msa1340910-mRNA-1
tig0004652 CDS 114 383 114 ID=Msa1340910-mRNA-1:cds;Parent=Msa1340910-mRNA-1
tig0004652 CDS 595 785 595 ID=Msa1340910-mRNA-1:cds;Parent=Msa1340910-mRNA-1
tig0004652 CDS 889 1039 889 ID=Msa1340910-mRNA-1:cds;Parent=Msa1340910-mRNA-1
tig0004652 CDS 1548 1680 1548 ID=Msa1340910-mRNA-1:cds;Parent=Msa1340910-mRNA-1
tig0004652 CDS 2523 2724 2523 ID=Msa1340910-mRNA-1:cds;Parent=Msa1340910-mRNA-1
tig0004652 CDS 3564 3840 3564 ID=Msa1340910-mRNA-1:cds;Parent=Msa1340910-mRNA-1
tig0004652 CDS 4377 4508 4377 ID=Msa1340910-mRNA-1:cds;Parent=Msa1340910-mRNA-1
tig0004652 CDS 5393 5613 5393 ID=Msa1340910-mRNA-1:cds;Parent=Msa1340910-mRNA-1
tig0004652 CDS 6130 6342 6130 ID=Msa1340910-mRNA-1:cds;Parent=Msa1340910-mRNA-1
tig0004652 CDS 6519 6603 6519 ID=Msa1340910-mRNA-1:cds;Parent=Msa1340910-mRNA-1
tig0004652 CDS 6996 7298 6996 ID=Msa1340910-mRNA-1:cds;Parent=Msa1340910-mRNA-1
tig0004652 three_prime_UTR 7299 7587 7299 ID=Msa1340910-mRNA-1:three_prime_utr;Parent=Msa1340910-mRNA-1
tig0004652 three_prime_UTR 7864 7986 7864 ID=Msa1340910-mRNA-1:three_prime_utr;Parent=Msa1340910-mRNA-1
Gene Sequence

>Msa1340910

ATGGTGGTTTTTGGCTGGAAAAAGGTTCATCAAATCGTCACCGGCTTCGGCGGAAGCGGCCTTGGCCAGCTCGCCGTCGCCGTCGCCGTCTCTTTCCTTGTTCGTATCTTCTCTGCACCCGGTCCCGCTCTCTTGCCGGAGAACGACGATGACGATGACGATGCTTCAATCAACGACGGTGAAACTCCTCCTTCCACCGGAAAGGTTACTCCGGTCACAATCCGTTGGAACAATATTAATTGTTCACTTTCTGATAAATCCTCCAAGTCCGTGAGGTTTTTGCTTAAAAATCTGAGTGGAGAAGCAAAACCGGGAAGATTATTAGCAATAATGGGACCTTCAGGTTCAGGGAAGACAACATTGCTCAATGTTCTTGCTGGTCAGCTATCAGCGTCACCTCGGCTTCATTTGAGTGGTCTTTTGGAGTTCAATGGAAAGCCGAGTTCCAGAAACGCTTACAAGTTTGCTTATGTGAGACAGGAGGATCTCTTCTTCTCACAGCTTACTGTGCGGGAAACATTGTCTCTTGCTATAGAATTACAGCTTCACAACATATCTTCTGCCAAGGAGAGGGATGAATATGTCAACAATCTCCTTTTCAAAACAGGCCTGGTCAGTTGTGCTGATACTAATGTTGGTGATGCAAAAGTTCGTGGAATCAGTGGTGGAGAAAAGAAACGTTTATCCTTGGCATGTGAACTGCTTGCAAGCCCATCTGTTATATTTGCTGATGAACCCACAACAGGACTTGATGCCTTCCAGGCTGAGAAGGTTATGGAAACTCTCCGACAACTTGCACTTGATGGTCATACTGTAATATGCTCTATACATCAGCCAAGAGGATCAGTGTACAGCAAATTCGACGACATTGTCTTGCTAACTGATGGTTCCCTTGTTTATGCTGGTCCTGCTGGTGATGAACCATTGACGTACTTCTCAAAATTCGGGTACCACTGCTCAGATCATGTTAATCCTGCAGAATTTTTGGCCGATCTTATATCCATAGACTACAGTTCTTCTGACAGTGTTTATTCCTCTCAAAAAAGGATCAATGGGCTTGTTGAGTCATTCTCACTAAGACGATCTACAATAATATATGCTACTCCAATTACTCTAGATGACCTCTCGAAAAGTAGAAAGAGAATCAGCAAGAGGACTGTAGCAAAAACGAAAGGGGGCTGGTGGAAGCAATTTCGGTTGCTTCTTAGACGGGCATGGATGCAGGCTTCCCGTGATGCACCTACCAACAAAGTTCGGTCAAGGATGTCAATTGCATCAGCAGTTATCTTTGGGTCAGTTTTTTGGAGAATGGGAAAATCTCAGACTTCAATACAAGACAGAATGGGGTTGCTTCAGGTTGCTGCTATAAACACAGCTATGGCTGCTCTCACAAAGACTGTGGGTGTATTTCCGAAGGAACGGTCAATTGTTGATAGAGAACGTTCTAAAGGCTCCTATTCCTTGGGCCCCTATCTGTTTTCTAAACTATTGGCTGAGGCTCCCATTGGAGCAGCATTTCCATTAATGTTTGGTGCTGTTTTATACCCAATGGCACGTCTCCATCCCACTTTAATGAGATTTGGGAAATTCTGTGGAATCGTTACTGCAGAATCCTTTGCTGCATCTGCGATGGGTCTTACCGTTGGTGCTATGGTTCCAACCACTGAAGCAGCAATGACAGTAGGCCCCTCTCTTATGACAGTATTTATAGTATTTGGTGGCTACTATGTCAACCCTGAGAATACCCCAATCATCTTCCGCTGGATTCCTAGTGTTTCTCTGATTAGATGGGCCTTTCAAGGACTTTGCATCAATGAATTTCGTGGTCTTCAATTTGATCATCAGCATTCATTTGATATTCAAACTGGAGAACAGGCACTAGAGCGTCTTTCCTTTGGAAAAAGTACAATTAGGGATACACTGCTAGCGCAAAATAGAATATTGTTATTTTGGTATTGTACCACCTACCTTCTCCTTGAGAAAAACAAGCCCAAATACCAGCAACTTGAAACAACACCTCCTGACCACAGTAAACCACATTTAAAACTCGAGGAGTTAAATCCTGAACAAGTTGATCAGACACATGAAGCACCAGAGGTCAGCCAAGTTGGTACGGACGAGCCCCTTGAGTCACCTGAAGTAGACCCTATTGGCTCCTTTATCCTAGAAGGTTTGTAA
Protein sequence

>Msa1340910

MVVFGWKKVHQIVTGFGGSGLGQLAVAVAVSFLVRIFSAPGPALLPENDDDDDDASINDGETPPSTGKVTPVTIRWNNINCSLSDKSSKSVRFLLKNLSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLSASPRLHLSGLLEFNGKPSSRNAYKFAYVRQEDLFFSQLTVRETLSLAIELQLHNISSAKERDEYVNNLLFKTGLVSCADTNVGDAKVRGISGGEKKRLSLACELLASPSVIFADEPTTGLDAFQAEKVMETLRQLALDGHTVICSIHQPRGSVYSKFDDIVLLTDGSLVYAGPAGDEPLTYFSKFGYHCSDHVNPAEFLADLISIDYSSSDSVYSSQKRINGLVESFSLRRSTIIYATPITLDDLSKSRKRISKRTVAKTKGGWWKQFRLLLRRAWMQASRDAPTNKVRSRMSIASAVIFGSVFWRMGKSQTSIQDRMGLLQVAAINTAMAALTKTVGVFPKERSIVDRERSKGSYSLGPYLFSKLLAEAPIGAAFPLMFGAVLYPMARLHPTLMRFGKFCGIVTAESFAASAMGLTVGAMVPTTEAAMTVGPSLMTVFIVFGGYYVNPENTPIIFRWIPSVSLIRWAFQGLCINEFRGLQFDHQHSFDIQTGEQALERLSFGKSTIRDTLLAQNRILLFWYCTTYLLLEKNKPKYQQLETTPPDHSKPHLKLEELNPEQVDQTHEAPEVSQVGTDEPLESPEVDPIGSFILEGL*