Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0066680 | sp|Q84W65|SUFE1_ARATH | 71.525 | 295 | 71 | 4 | 145 | 426 | 77 | 371 | 2.39e-136 | 398 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0066680 | A0A072VGX0 | 96.601 | 353 | 12 | 0 | 77 | 429 | 1 | 353 | 0.0 | 693 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011060 | Msa0066680 | 0.814394 | 1.575845e-51 | -8.615850e-47 |
| Msa0048410 | Msa0066680 | 0.814368 | 1.596571e-51 | -8.615850e-47 |
| Msa0066680 | Msa0081700 | 0.816849 | 4.473643e-52 | -8.615850e-47 |
| Msa0066680 | Msa0174060 | 0.828991 | 6.607816e-55 | -8.615850e-47 |
| Msa0066680 | Msa0195030 | -0.802061 | 6.706886e-49 | -8.615850e-47 |
| Msa0066680 | Msa0225070 | 0.814575 | 1.436628e-51 | -8.615850e-47 |
| Msa0066680 | Msa0251920 | -0.818780 | 1.639397e-52 | -8.615850e-47 |
| Msa0066680 | Msa0290800 | -0.808567 | 2.906517e-50 | -8.615850e-47 |
| Msa0066680 | Msa0328870 | -0.821332 | 4.271100e-53 | -8.615850e-47 |
| Msa0066680 | Msa0331070 | 0.806181 | 9.318648e-50 | -8.615850e-47 |
| Msa0066680 | Msa0343230 | 0.805783 | 1.129942e-49 | -8.615850e-47 |
| Msa0066680 | Msa0422230 | 0.807079 | 6.022484e-50 | -8.615850e-47 |
| Msa0066680 | Msa0528830 | 0.811016 | 8.643722e-51 | -8.615850e-47 |
| Msa0066680 | Msa0533610 | 0.825049 | 5.793119e-54 | -8.615850e-47 |
| Msa0066680 | Msa0538050 | 0.824631 | 7.270990e-54 | -8.615850e-47 |
| Msa0066680 | Msa0569980 | 0.826437 | 2.714623e-54 | -8.615850e-47 |
| Msa0066680 | Msa0591840 | 0.825330 | 4.972493e-54 | -8.615850e-47 |
| Msa0066680 | Msa0610240 | 0.822884 | 1.865564e-53 | -8.615850e-47 |
| Msa0066680 | Msa0632040 | 0.824869 | 6.389695e-54 | -8.615850e-47 |
| Msa0066680 | Msa0658520 | 0.804884 | 1.743698e-49 | -8.615850e-47 |
| Msa0066680 | Msa0659020 | 0.818123 | 2.309827e-52 | -8.615850e-47 |
| Msa0066680 | Msa0662670 | 0.804987 | 1.659138e-49 | -8.615850e-47 |
| Msa0066680 | Msa0702020 | 0.811953 | 5.409163e-51 | -8.615850e-47 |
| Msa0066680 | Msa0703430 | 0.820963 | 5.194924e-53 | -8.615850e-47 |
| Msa0066680 | Msa0708870 | 0.807367 | 5.232101e-50 | -8.615850e-47 |
| Msa0066680 | Msa0733240 | 0.802054 | 6.730923e-49 | -8.615850e-47 |
| Msa0066680 | Msa0807870 | 0.820225 | 7.674892e-53 | -8.615850e-47 |
| Msa0066680 | Msa0898830 | 0.809137 | 2.195505e-50 | -8.615850e-47 |
| Msa0066680 | Msa0906100 | 0.801453 | 8.938422e-49 | -8.615850e-47 |
| Msa0066680 | Msa0934290 | 0.801997 | 6.913933e-49 | -8.615850e-47 |
| Msa0066680 | Msa0967900 | 0.806235 | 9.075999e-50 | -8.615850e-47 |
| Msa0066680 | Msa1014550 | 0.807171 | 5.758441e-50 | -8.615850e-47 |
| Msa0066680 | Msa1035790 | 0.810372 | 1.190864e-50 | -8.615850e-47 |
| Msa0066680 | Msa1055520 | 0.800587 | 1.343700e-48 | -8.615850e-47 |
| Msa0066680 | Msa1093190 | 0.801853 | 7.400723e-49 | -8.615850e-47 |
| Msa0066680 | Msa1128230 | 0.809400 | 1.927952e-50 | -8.615850e-47 |
| Msa0066680 | Msa1143060 | 0.802652 | 5.068339e-49 | -8.615850e-47 |
| Msa0066680 | Msa1145930 | 0.812805 | 3.523269e-51 | -8.615850e-47 |
| Msa0066680 | Msa1198830 | 0.801447 | 8.967442e-49 | -8.615850e-47 |
| Msa0066680 | Msa1202710 | 0.809963 | 1.459128e-50 | -8.615850e-47 |
| Msa0066680 | Msa1205270 | 0.802157 | 6.409660e-49 | -8.615850e-47 |
| Msa0066680 | Msa1209990 | 0.802143 | 6.452622e-49 | -8.615850e-47 |
| Msa0066680 | Msa1228600 | 0.808171 | 3.531061e-50 | -8.615850e-47 |
| Msa0066680 | Msa1298480 | 0.801327 | 9.487978e-49 | -8.615850e-47 |
| Msa0066680 | Msa1327690 | 0.837448 | 5.166700e-57 | -8.615850e-47 |
| Msa0066680 | Msa1340910 | 0.802770 | 4.791077e-49 | -8.615850e-47 |
| Msa0066680 | Msa1341390 | 0.836589 | 8.563654e-57 | -8.615850e-47 |
| Msa0066680 | Msa1364110 | -0.810335 | 1.213432e-50 | -8.615850e-47 |
| Msa0066680 | Msa1369220 | 0.824935 | 6.162109e-54 | -8.615850e-47 |
| Msa0066680 | Msa1377980 | 0.801158 | 1.027336e-48 | -8.615850e-47 |
| Msa0066680 | Msa1384410 | 0.848513 | 5.844830e-60 | -8.615850e-47 |
| Msa0066680 | Msa1408280 | 0.800376 | 1.483676e-48 | -8.615850e-47 |
| Msa0066680 | Msa1464470 | 0.812114 | 4.989357e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0066680 | MtrunA17_Chr1g0170001 | 96.601 | 353 | 12 | 0 | 77 | 429 | 1 | 353 | 0.0 | 693 |
| Msa0066680 | MtrunA17_Chr6g0481551 | 57.609 | 92 | 38 | 1 | 336 | 426 | 9 | 100 | 2.18e-31 | 115 |
| Msa0066680 | MtrunA17_Chr4g0058291 | 36.170 | 188 | 113 | 6 | 104 | 289 | 66 | 248 | 3.76e-20 | 93.2 |
| Msa0066680 | MtrunA17_Chr3g0123541 | 35.938 | 128 | 80 | 1 | 154 | 279 | 61 | 188 | 9.98e-19 | 84.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0066680 | AT4G26500.1 | 71.525 | 295 | 71 | 4 | 145 | 426 | 77 | 371 | 2.43e-137 | 398 |
| Msa0066680 | AT1G55805.1 | 71.591 | 88 | 24 | 1 | 339 | 425 | 68 | 155 | 2.92e-39 | 139 |
| Msa0066680 | AT1G67810.1 | 32.000 | 175 | 112 | 3 | 116 | 284 | 35 | 208 | 3.76e-17 | 81.3 |
| Msa0066680 | AT5G50210.1 | 32.812 | 192 | 124 | 4 | 100 | 289 | 35 | 223 | 1.33e-14 | 76.6 |
Find 113 sgRNAs with CRISPR-Local
Find 361 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTAGAGAATGTTGCAATTT+TGG | 0.161532 | 1_2:-30714847 | None:intergenic |
| CTTCAAGATGAGTTGGATTC+TGG | 0.176580 | 1_2:+30718848 | Msa0066680:CDS |
| CCAAGTTTAGGTGTTGATTT+TGG | 0.250352 | 1_2:+30718590 | Msa0066680:CDS |
| GAAGAGAAGCTGTTCGTATT+TGG | 0.258831 | 1_2:-30718144 | None:intergenic |
| TTAACCCCTTCTAGAAATAA+TGG | 0.260107 | 1_2:+30718419 | Msa0066680:CDS |
| GAAGAGGGAAAGTGAGAATT+TGG | 0.282002 | 1_2:-30717913 | None:intergenic |
| AGCTGTTCGTATTTGGCTTT+GGG | 0.314164 | 1_2:-30718137 | None:intergenic |
| ATAATATGTTAGGACAAAAT+TGG | 0.322025 | 1_2:+30714304 | Msa0066680:five_prime_UTR |
| AAGCTGTTCGTATTTGGCTT+TGG | 0.330510 | 1_2:-30718138 | None:intergenic |
| AAGGTTGTGTCTCTCAGGTT+TGG | 0.339683 | 1_2:+30718225 | Msa0066680:CDS |
| AGAGAGGTCTGAAACGTAAT+TGG | 0.340267 | 1_2:-30714885 | None:intergenic |
| CCCAAGATGCATTACAAAAT+CGG | 0.341009 | 1_2:-30718384 | None:intergenic |
| TTTACGATTTCTTGAAGCTT+TGG | 0.349699 | 1_2:-30718092 | None:intergenic |
| CCTTCTGTGACCCCAAGTTT+AGG | 0.359965 | 1_2:+30718578 | Msa0066680:CDS |
| AGGGAGAGGGAAGAGGATAA+AGG | 0.373167 | 1_2:+30718646 | Msa0066680:CDS |
| CTCGCTGCTTTACTCGTTCA+AGG | 0.382796 | 1_2:+30718320 | Msa0066680:CDS |
| AGAGTTTCAAGGGAAGAGTT+TGG | 0.384288 | 1_2:+30718796 | Msa0066680:CDS |
| TAACCCCTTCTAGAAATAAT+GGG | 0.387357 | 1_2:+30718420 | Msa0066680:CDS |
| AGGTTGTGTCTCTCAGGTTT+GGG | 0.389742 | 1_2:+30718226 | Msa0066680:CDS |
| GCTTTATGTGGAAGCTGAAA+AGG | 0.393828 | 1_2:+30718484 | Msa0066680:CDS |
| CATTGTTGCTGGTATGTTCA+AGG | 0.398368 | 1_2:-30717844 | None:intergenic |
| TGATGACGAGAATGTTGAAT+TGG | 0.400400 | 1_2:+30718622 | Msa0066680:CDS |
| TGGGAGTGATTGGAAGGTGA+TGG | 0.400836 | 1_2:-30717994 | None:intergenic |
| GCTGGACATGCTGGTGTTAG+AGG | 0.402189 | 1_2:+30718731 | Msa0066680:CDS |
| ACCTGGATAATTTCATTAAC+GGG | 0.402796 | 1_2:-30718356 | None:intergenic |
| CGTTGTCTATGAAGCTGATT+CGG | 0.403821 | 1_2:+30718277 | Msa0066680:CDS |
| CTTTGGGTTCTTGCACGGAT+TGG | 0.404849 | 1_2:-30718121 | None:intergenic |
| AAGGGAAGAGTTTGGTTAAG+AGG | 0.410584 | 1_2:+30718804 | Msa0066680:CDS |
| ATTGGGATTCGAGGGGTTTG+AGG | 0.413363 | 1_2:-30718178 | None:intergenic |
| AATGGGTTAGATAGATAATT+CGG | 0.418309 | 1_2:-30714327 | None:intergenic |
| TCTTCAACTTCCAACTCAAT+AGG | 0.421778 | 1_2:-30718692 | None:intergenic |
| GGTTTGGGTCCGAGCCTACT+TGG | 0.423534 | 1_2:+30718241 | Msa0066680:CDS |
| GACCTGGATAATTTCATTAA+CGG | 0.427963 | 1_2:-30718357 | None:intergenic |
| ACTTCTGAATCTGACTCAAT+TGG | 0.431624 | 1_2:+30718509 | Msa0066680:CDS |
| CCAAAATCAACACCTAAACT+TGG | 0.437746 | 1_2:-30718590 | None:intergenic |
| GGGAGTGATTGGAAGGTGAT+GGG | 0.438845 | 1_2:-30717993 | None:intergenic |
| GCTCAGAAACATGCGTTCAA+TGG | 0.448135 | 1_2:-30714345 | None:intergenic |
| TTCGATGGGTTGAAGGGAAG+TGG | 0.449871 | 1_2:-30718060 | None:intergenic |
| GGAGTTCTTCGATGGGTTGA+AGG | 0.449918 | 1_2:-30718067 | None:intergenic |
| AATTGGGAGGGAGAGGGAAG+AGG | 0.450448 | 1_2:+30718639 | Msa0066680:CDS |
| GAAAGAGAAGAGGGTGTTTG+TGG | 0.454312 | 1_2:-30717967 | None:intergenic |
| AAAACCCATTATTTCTAGAA+GGG | 0.455596 | 1_2:-30718424 | None:intergenic |
| TGAACATGAAGAAAGGGAAT+TGG | 0.456159 | 1_2:-30717874 | None:intergenic |
| GTGGTTTCTAAAGAGTTTCA+AGG | 0.456838 | 1_2:+30718785 | Msa0066680:CDS |
| CTTTGGAGGGAGTTCTTCGA+TGG | 0.457099 | 1_2:-30718075 | None:intergenic |
| TAGCTTGCTTCAAGATGAGT+TGG | 0.460976 | 1_2:+30718841 | Msa0066680:CDS |
| TTGGTGGACATCATTGTTGC+TGG | 0.461061 | 1_2:-30717855 | None:intergenic |
| CTCAGAAACATGCGTTCAAT+GGG | 0.464978 | 1_2:-30714344 | None:intergenic |
| AGTCGAAGGTTGTGTCTCTC+AGG | 0.465822 | 1_2:+30718220 | Msa0066680:CDS |
| AAAGAGAAGAGGGTGTTTGT+GGG | 0.468262 | 1_2:-30717966 | None:intergenic |
| GGAACTTCAGCCTATTGAGT+TGG | 0.469218 | 1_2:+30718682 | Msa0066680:CDS |
| ATCGAAATGAACATGAAGAA+AGG | 0.469710 | 1_2:-30717881 | None:intergenic |
| AAAAGCACTTACGCTTTATG+TGG | 0.472832 | 1_2:+30718472 | Msa0066680:CDS |
| GATGATGATGATGGTGGTGG+TGG | 0.473775 | 1_2:-30718023 | None:intergenic |
| TTTGGCTTTGGGTTCTTGCA+CGG | 0.474908 | 1_2:-30718126 | None:intergenic |
| AACCGGCCGGAAAACGCCAC+TGG | 0.475501 | 1_2:+30714383 | Msa0066680:CDS |
| ACGGAGTATCTCACTGTTTG+CGG | 0.482377 | 1_2:-30714422 | None:intergenic |
| CGGATTCTGTTCTCACCAAA+GGG | 0.484901 | 1_2:+30718297 | Msa0066680:CDS |
| ACGATTTCTTGAAGCTTTGG+AGG | 0.485000 | 1_2:-30718089 | None:intergenic |
| CCAAGATGCATTACAAAATC+GGG | 0.485227 | 1_2:-30718383 | None:intergenic |
| GACACATTTCAATGTTAAAG+TGG | 0.486500 | 1_2:+30718766 | Msa0066680:CDS |
| AATGTTGAATTGGGAGGGAG+AGG | 0.486652 | 1_2:+30718632 | Msa0066680:CDS |
| TACGAACAGCTTCTCTTCTA+CGG | 0.489334 | 1_2:+30718149 | Msa0066680:CDS |
| TCGGATTCTGTTCTCACCAA+AGG | 0.495251 | 1_2:+30718296 | Msa0066680:CDS |
| GATGACGAGAATGTTGAATT+GGG | 0.497878 | 1_2:+30718623 | Msa0066680:CDS |
| GATAAAGGAAAAGCTTGAAA+AGG | 0.498122 | 1_2:+30718661 | Msa0066680:CDS |
| ACCGACTTCAGAAGGCGTCT+TGG | 0.500732 | 1_2:-30718894 | None:intergenic |
| AGAGTTTGGTTAAGAGGCAT+AGG | 0.503534 | 1_2:+30718810 | Msa0066680:CDS |
| TGAAGGGAAGTGGATGGAAG+TGG | 0.504888 | 1_2:-30718050 | None:intergenic |
| TTACAAAATCGGGTGTGACC+TGG | 0.509018 | 1_2:-30718373 | None:intergenic |
| CATCCTTCACCGACTTCAGA+AGG | 0.509950 | 1_2:-30718902 | None:intergenic |
| TCGAAATGAACATGAAGAAA+GGG | 0.512101 | 1_2:-30717880 | None:intergenic |
| GTTCTTGCACGGATTGGAAG+AGG | 0.512154 | 1_2:-30718115 | None:intergenic |
| CTTTATGTGGAAGCTGAAAA+GGG | 0.516712 | 1_2:+30718485 | Msa0066680:CDS |
| CAAAATCAACACCTAAACTT+GGG | 0.519100 | 1_2:-30718589 | None:intergenic |
| TATCAACATGCTGGACATGC+TGG | 0.527867 | 1_2:+30718722 | Msa0066680:CDS |
| ACATGAAGAAAGGGAATTGG+TGG | 0.538024 | 1_2:-30717871 | None:intergenic |
| TGGGTCCGAGCCTACTTGGA+TGG | 0.540763 | 1_2:+30718245 | Msa0066680:CDS |
| GAGTAAAGCAGCGAGCCCTT+TGG | 0.541289 | 1_2:-30718312 | None:intergenic |
| ATGTTGAATTGGGAGGGAGA+GGG | 0.542038 | 1_2:+30718633 | Msa0066680:CDS |
| AAACCCATTATTTCTAGAAG+GGG | 0.542885 | 1_2:-30718423 | None:intergenic |
| GATGGGTTTGAAAGAGAAGA+GGG | 0.545338 | 1_2:-30717976 | None:intergenic |
| ACCCGTTAATGAAATTATCC+AGG | 0.545924 | 1_2:+30718355 | Msa0066680:CDS |
| GCAGACTGAACGAACTCAAC+CGG | 0.547908 | 1_2:+30714366 | Msa0066680:CDS |
| CCTAAACTTGGGGTCACAGA+AGG | 0.548902 | 1_2:-30718578 | None:intergenic |
| CGATTTCTTGAAGCTTTGGA+GGG | 0.549690 | 1_2:-30718088 | None:intergenic |
| ATGGGTTGAAGGGAAGTGGA+TGG | 0.556200 | 1_2:-30718056 | None:intergenic |
| AGCTTTGTTGAGAATTCAAG+TGG | 0.556883 | 1_2:+30718554 | Msa0066680:CDS |
| GTTTCTTTCACCATCCAAGT+AGG | 0.562090 | 1_2:-30718255 | None:intergenic |
| ACGAGAATGTTGAATTGGGA+GGG | 0.562350 | 1_2:+30718627 | Msa0066680:CDS |
| GCCAAGACGCCTTCTGAAGT+CGG | 0.570403 | 1_2:+30718893 | Msa0066680:CDS |
| TGGTTTCTAAAGAGTTTCAA+GGG | 0.574771 | 1_2:+30718786 | Msa0066680:CDS |
| TGATGGGTTTGAAAGAGAAG+AGG | 0.578500 | 1_2:-30717977 | None:intergenic |
| TTTCACCATCCAAGTAGGCT+CGG | 0.579472 | 1_2:-30718250 | None:intergenic |
| AACAGTGAGATACTCCGTCC+AGG | 0.580566 | 1_2:+30714427 | Msa0066680:CDS |
| GAGTTCTTCGATGGGTTGAA+GGG | 0.581123 | 1_2:-30718066 | None:intergenic |
| ACGCCTTCTGAAGTCGGTGA+AGG | 0.585013 | 1_2:+30718899 | Msa0066680:CDS |
| AACGCCACTGGAGTTTGTCG+TGG | 0.587509 | 1_2:+30714395 | Msa0066680:CDS |
| TTTGGAGGGAGTTCTTCGAT+GGG | 0.593786 | 1_2:-30718074 | None:intergenic |
| GATGTGTCTTATCAACATGC+TGG | 0.597053 | 1_2:+30718713 | Msa0066680:CDS |
| AACATTCTCGTCATCAACCT+CGG | 0.597911 | 1_2:-30718615 | None:intergenic |
| CTGGACATGCTGGTGTTAGA+GGG | 0.601848 | 1_2:+30718732 | Msa0066680:CDS |
| AGTTTGTGGTCAAACTCTAG+TGG | 0.626522 | 1_2:-30714910 | None:intergenic |
| ACTAAAGACAACAAAGTCGA+AGG | 0.628037 | 1_2:+30718206 | Msa0066680:CDS |
| AAAATCAACACCTAAACTTG+GGG | 0.630526 | 1_2:-30718588 | None:intergenic |
| CTAAACTTGGGGTCACAGAA+GGG | 0.633009 | 1_2:-30718577 | None:intergenic |
| ACGCCACTGGAGTTTGTCGT+GGG | 0.641241 | 1_2:+30714396 | Msa0066680:CDS |
| ACTGAACGAACTCAACCGGC+CGG | 0.646636 | 1_2:+30714370 | Msa0066680:CDS |
| GACGAGAATGTTGAATTGGG+AGG | 0.654890 | 1_2:+30718626 | Msa0066680:CDS |
| TCAAACTCTAGTGGTTAGAG+AGG | 0.677834 | 1_2:-30714901 | None:intergenic |
| CTGCCCACGACAAACTCCAG+TGG | 0.680592 | 1_2:-30714399 | None:intergenic |
| GCTGGTGTTAGAGGGAGCGA+TGG | 0.680792 | 1_2:+30718740 | Msa0066680:CDS |
| AGAGAGAAGGAAAACCTGGA+CGG | 0.687559 | 1_2:-30714441 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTAATAGAATTGAATTA+TGG | + | chr1_2:30714614-30714633 | Msa0066680:intron | 10.0% |
| !! | ATTTAATAGAATTGAATTAT+GGG | + | chr1_2:30714615-30714634 | Msa0066680:intron | 10.0% |
| !! | GAAATAAATAAAAACAAAAT+TGG | + | chr1_2:30716763-30716782 | Msa0066680:intron | 10.0% |
| !!! | AATTATGTTTTGAAGTAAAT+AGG | + | chr1_2:30715151-30715170 | Msa0066680:intron | 15.0% |
| !! | AAGTGTATTAAATATATGTT+TGG | + | chr1_2:30715182-30715201 | Msa0066680:intron | 15.0% |
| !! | AGTGTATTAAATATATGTTT+GGG | + | chr1_2:30715183-30715202 | Msa0066680:intron | 15.0% |
| !! | TGATACTAAAATAAGTTATT+TGG | - | chr1_2:30715211-30715230 | None:intergenic | 15.0% |
| !! | AACTACTTTATCTTAATAAT+AGG | + | chr1_2:30715345-30715364 | Msa0066680:intron | 15.0% |
| !! | ACTACTTTATCTTAATAATA+GGG | + | chr1_2:30715346-30715365 | Msa0066680:intron | 15.0% |
| !! | CTTTAAACATGTTATAATTA+TGG | - | chr1_2:30716532-30716551 | None:intergenic | 15.0% |
| !! | GGTGTAAAAAATAATAAAAA+TGG | + | chr1_2:30716736-30716755 | Msa0066680:intron | 15.0% |
| !! | ATAATATGTTAGGACAAAAT+TGG | + | chr1_2:30714304-30714323 | Msa0066680:five_prime_UTR | 20.0% |
| !!! | AGTGAAAATTCATATTTTGA+TGG | + | chr1_2:30714707-30714726 | Msa0066680:intron | 20.0% |
| !!! | ATATTTTGATGGAACTATTA+CGG | + | chr1_2:30714718-30714737 | Msa0066680:intron | 20.0% |
| !!! | TTTTGCATAACTTTCTATTA+TGG | + | chr1_2:30715120-30715139 | Msa0066680:intron | 20.0% |
| !! | ATTAAGATAAAGTAGTTTAG+AGG | - | chr1_2:30715342-30715361 | None:intergenic | 20.0% |
| !! | AAATGTTATACTTGAGTTTA+AGG | - | chr1_2:30715511-30715530 | None:intergenic | 20.0% |
| !!! | TTTATGATGCAATGAAATTT+TGG | + | chr1_2:30715610-30715629 | Msa0066680:intron | 20.0% |
| !!! | TTATGATGCAATGAAATTTT+GGG | + | chr1_2:30715611-30715630 | Msa0066680:intron | 20.0% |
| !! | TTAATGAATAACTCATGAAA+TGG | + | chr1_2:30715922-30715941 | Msa0066680:intron | 20.0% |
| !!! | TAAACATAATCCACATTTTT+GGG | + | chr1_2:30716066-30716085 | Msa0066680:intron | 20.0% |
| !! | TTCTTTGTATTTAACATATC+CGG | + | chr1_2:30716238-30716257 | Msa0066680:intron | 20.0% |
| !! | ATAATAGAGTTAAAAAACCA+AGG | + | chr1_2:30716873-30716892 | Msa0066680:intron | 20.0% |
| !! | TAATAGAGTTAAAAAACCAA+GGG | + | chr1_2:30716874-30716893 | Msa0066680:intron | 20.0% |
| !!! | AACTAAAATACCATTTTGAT+TGG | + | chr1_2:30717083-30717102 | Msa0066680:intron | 20.0% |
| !!! | TATCCTATTTTGTAAACTTT+AGG | - | chr1_2:30717580-30717599 | None:intergenic | 20.0% |
| !! | TAAAGTTTACAAAATAGGAT+AGG | + | chr1_2:30717579-30717598 | Msa0066680:intron | 20.0% |
| !!! | ACTATTTTAAGACACTTTTA+TGG | + | chr1_2:30717626-30717645 | Msa0066680:intron | 20.0% |
| !!! | GTTGTCTTTAGTTTTAAATT+GGG | - | chr1_2:30718198-30718217 | None:intergenic | 20.0% |
| !!! | TGTTGTCTTTAGTTTTAAAT+TGG | - | chr1_2:30718199-30718218 | None:intergenic | 20.0% |
| !!! | AATGGGTTAGATAGATAATT+CGG | - | chr1_2:30714330-30714349 | None:intergenic | 25.0% |
| !!! | ATCAAGGTTTTATTGTAACT+TGG | + | chr1_2:30714544-30714563 | Msa0066680:intron | 25.0% |
| !!! | CTGATATTTTCTTCTAGTTT+AGG | + | chr1_2:30714761-30714780 | Msa0066680:intron | 25.0% |
| !!! | TATTTTCTTCTAGTTTAGGA+AGG | + | chr1_2:30714765-30714784 | Msa0066680:intron | 25.0% |
| ! | TTATCAACAAGTTATCATGA+TGG | - | chr1_2:30715020-30715039 | None:intergenic | 25.0% |
| ! | TATGTGTACATATGTATGTT+TGG | + | chr1_2:30715063-30715082 | Msa0066680:intron | 25.0% |
| ! | TCTAACTTAAGATTAAAACC+AGG | - | chr1_2:30715310-30715329 | None:intergenic | 25.0% |
| ! | ATAAAGTAGTTTAGAGGTTT+AGG | - | chr1_2:30715336-30715355 | None:intergenic | 25.0% |
| ! | ATATGTGACAACTAAACAAA+GGG | - | chr1_2:30715436-30715455 | None:intergenic | 25.0% |
| ! | AATATGTGACAACTAAACAA+AGG | - | chr1_2:30715437-30715456 | None:intergenic | 25.0% |
| !! | TATGATGCAATGAAATTTTG+GGG | + | chr1_2:30715612-30715631 | Msa0066680:intron | 25.0% |
| ! | ACAAAATAGATATGACTCAA+AGG | - | chr1_2:30715715-30715734 | None:intergenic | 25.0% |
| !! | TGTATGCATCATATCTATTT+TGG | + | chr1_2:30715732-30715751 | Msa0066680:intron | 25.0% |
| !! | GTATGCATCATATCTATTTT+GGG | + | chr1_2:30715733-30715752 | Msa0066680:intron | 25.0% |
| !! | TATGCATCATATCTATTTTG+GGG | + | chr1_2:30715734-30715753 | Msa0066680:intron | 25.0% |
| !! | CTAAACATAATCCACATTTT+TGG | + | chr1_2:30716065-30716084 | Msa0066680:intron | 25.0% |
| !!! | ATTTTTGGGAGATTTTTTCT+GGG | + | chr1_2:30716080-30716099 | Msa0066680:intron | 25.0% |
| ! | TACAAAGAATGCTGATAAAA+TGG | - | chr1_2:30716227-30716246 | None:intergenic | 25.0% |
| !!! | ACAATCAAGGTTCTAAAAAA+CGG | + | chr1_2:30716335-30716354 | Msa0066680:intron | 25.0% |
| !! | AGACATTAAAGTGTCAAAAA+TGG | + | chr1_2:30716715-30716734 | Msa0066680:intron | 25.0% |
| ! | TCCAAATTTAATTCCTACAT+AGG | + | chr1_2:30716827-30716846 | Msa0066680:intron | 25.0% |
| ! | ACTCTATTATTTAGATCTTG+TGG | - | chr1_2:30716863-30716882 | None:intergenic | 25.0% |
| !!! | GGTTTTAGAAAATTCAAAAG+TGG | - | chr1_2:30717040-30717059 | None:intergenic | 25.0% |
| !!! | GTATTTTAGTTTGTGAGATT+TGG | - | chr1_2:30717074-30717093 | None:intergenic | 25.0% |
| ! | AAGCTAGAAAGATTATAGAA+AGG | - | chr1_2:30717436-30717455 | None:intergenic | 25.0% |
| ! | TAATTATACCATGTCATTCA+TGG | + | chr1_2:30717459-30717478 | Msa0066680:intron | 25.0% |
| ! | AAAATATACCATGAATGACA+TGG | - | chr1_2:30717470-30717489 | None:intergenic | 25.0% |
| !! | TTAAATTTTTCTGTTCCAGA+AGG | - | chr1_2:30717494-30717513 | None:intergenic | 25.0% |
| ! | CTTATTACTTCGTAGTTAAT+AGG | - | chr1_2:30717527-30717546 | None:intergenic | 25.0% |
| ! | ACTACGAAGTAATAAGATAA+AGG | + | chr1_2:30717531-30717550 | Msa0066680:intron | 25.0% |
| !!! | TATTTTGTAAACTTTAGGAG+TGG | - | chr1_2:30717575-30717594 | None:intergenic | 25.0% |
| ! | ACTCCTAAAGTTTACAAAAT+AGG | + | chr1_2:30717574-30717593 | Msa0066680:intron | 25.0% |
| ! | TTAAAATAGTTGACTACCTA+GGG | - | chr1_2:30717616-30717635 | None:intergenic | 25.0% |
| ! | AACAAAATTTAAACAAACCC+AGG | - | chr1_2:30717798-30717817 | None:intergenic | 25.0% |
| !!! | GGGTTTGTTTAAATTTTGTT+TGG | + | chr1_2:30717798-30717817 | Msa0066680:intron | 25.0% |
| !!! | TGTTTAAATTTTGTTTGGTC+CGG | + | chr1_2:30717803-30717822 | Msa0066680:intron | 25.0% |
| !!! | AGAGTTATTTTTGTTGAAGA+GGG | - | chr1_2:30717931-30717950 | None:intergenic | 25.0% |
| !!! | TAGAGTTATTTTTGTTGAAG+AGG | - | chr1_2:30717932-30717951 | None:intergenic | 25.0% |
| !!! | AAAACCCATTATTTCTAGAA+GGG | - | chr1_2:30718427-30718446 | None:intergenic | 25.0% |
| !!! | AAAAACCCATTATTTCTAGA+AGG | - | chr1_2:30718428-30718447 | None:intergenic | 25.0% |
| !! | ACGATTTAGTTTGATAGCAT+AGG | + | chr1_2:30714520-30714539 | Msa0066680:intron | 30.0% |
| AAGAAAATATCAGCTAGAAG+TGG | - | chr1_2:30714754-30714773 | None:intergenic | 30.0% | |
| ! | GTAGAGAATGTTGCAATTTT+GGG | - | chr1_2:30714849-30714868 | None:intergenic | 30.0% |
| ! | TACATATGTATGTTTGGCTT+TGG | + | chr1_2:30715069-30715088 | Msa0066680:intron | 30.0% |
| ATCATGATATAACCCATTGT+TGG | + | chr1_2:30715097-30715116 | Msa0066680:intron | 30.0% | |
| AGTTATGCAAAACCAACAAT+GGG | - | chr1_2:30715112-30715131 | None:intergenic | 30.0% | |
| AAGTTATGCAAAACCAACAA+TGG | - | chr1_2:30715113-30715132 | None:intergenic | 30.0% | |
| TCAAAGCTTCATGGTAATAT+AGG | - | chr1_2:30715378-30715397 | None:intergenic | 30.0% | |
| !!! | TAGTTTTAGTCAAAGCTTCA+TGG | - | chr1_2:30715387-30715406 | None:intergenic | 30.0% |
| ! | AGTTTAAGGTTTATCTGGAT+AGG | - | chr1_2:30715497-30715516 | None:intergenic | 30.0% |
| ! | ACTTGAGTTTAAGGTTTATC+TGG | - | chr1_2:30715502-30715521 | None:intergenic | 30.0% |
| CTTTGATAAGAGACAAATTC+AGG | - | chr1_2:30715581-30715600 | None:intergenic | 30.0% | |
| ACTAAAGCATACATTCTTCA+TGG | - | chr1_2:30715777-30715796 | None:intergenic | 30.0% | |
| ATCTTTGAGTCTTGAGTATT+TGG | + | chr1_2:30715849-30715868 | Msa0066680:intron | 30.0% | |
| GAAAAAATCTCCCAAAAATG+TGG | - | chr1_2:30716079-30716098 | None:intergenic | 30.0% | |
| !! | CATTTTTGGGAGATTTTTTC+TGG | + | chr1_2:30716079-30716098 | Msa0066680:intron | 30.0% |
| TTTGTATTTAACATATCCGG+AGG | + | chr1_2:30716241-30716260 | Msa0066680:intron | 30.0% | |
| ATAAGATACAGATTTCACCA+AGG | - | chr1_2:30716296-30716315 | None:intergenic | 30.0% | |
| GAAATCTGTATCTTATAGCA+AGG | + | chr1_2:30716300-30716319 | Msa0066680:intron | 30.0% | |
| GCCTATGTAGGAATTAAATT+TGG | - | chr1_2:30716831-30716850 | None:intergenic | 30.0% | |
| !!! | ACTGAATTTTCAAGTCAGAA+CGG | + | chr1_2:30717185-30717204 | Msa0066680:intron | 30.0% |
| ATTTCTTTCTCAGCGTTAAA+AGG | + | chr1_2:30717289-30717308 | Msa0066680:intron | 30.0% | |
| TTTCTTTCTCAGCGTTAAAA+GGG | + | chr1_2:30717290-30717309 | Msa0066680:intron | 30.0% | |
| !!! | TGACCAAGGTTTTAAAAAAC+GGG | - | chr1_2:30717376-30717395 | None:intergenic | 30.0% |
| !!! | GTGACCAAGGTTTTAAAAAA+CGG | - | chr1_2:30717377-30717396 | None:intergenic | 30.0% |
| AAAGATTATAGAAAGGACCT+CGG | - | chr1_2:30717429-30717448 | None:intergenic | 30.0% | |
| ! | TCATGGTATATTTTTCCTTC+TGG | + | chr1_2:30717476-30717495 | Msa0066680:intron | 30.0% |
| CTTAAAATAGTTGACTACCT+AGG | - | chr1_2:30717617-30717636 | None:intergenic | 30.0% | |
| ! | AATTTTCCTGTGTTTATTGC+AGG | + | chr1_2:30717712-30717731 | Msa0066680:intron | 30.0% |
| TCGAAATGAACATGAAGAAA+GGG | - | chr1_2:30717883-30717902 | None:intergenic | 30.0% | |
| ATCGAAATGAACATGAAGAA+AGG | - | chr1_2:30717884-30717903 | None:intergenic | 30.0% | |
| TTTACGATTTCTTGAAGCTT+TGG | - | chr1_2:30718095-30718114 | None:intergenic | 30.0% | |
| !!! | AGTTTTAAATTGGGATTCGA+GGG | - | chr1_2:30718189-30718208 | None:intergenic | 30.0% |
| !!! | TAGTTTTAAATTGGGATTCG+AGG | - | chr1_2:30718190-30718209 | None:intergenic | 30.0% |
| ACCTGGATAATTTCATTAAC+GGG | - | chr1_2:30718359-30718378 | None:intergenic | 30.0% | |
| GACCTGGATAATTTCATTAA+CGG | - | chr1_2:30718360-30718379 | None:intergenic | 30.0% | |
| ! | TTAACCCCTTCTAGAAATAA+TGG | + | chr1_2:30718419-30718438 | Msa0066680:CDS | 30.0% |
| ! | TAACCCCTTCTAGAAATAAT+GGG | + | chr1_2:30718420-30718439 | Msa0066680:CDS | 30.0% |
| !! | AAACCCATTATTTCTAGAAG+GGG | - | chr1_2:30718426-30718445 | None:intergenic | 30.0% |
| AAAATCAACACCTAAACTTG+GGG | - | chr1_2:30718591-30718610 | None:intergenic | 30.0% | |
| CAAAATCAACACCTAAACTT+GGG | - | chr1_2:30718592-30718611 | None:intergenic | 30.0% | |
| GATAAAGGAAAAGCTTGAAA+AGG | + | chr1_2:30718661-30718680 | Msa0066680:CDS | 30.0% | |
| GACACATTTCAATGTTAAAG+TGG | + | chr1_2:30718766-30718785 | Msa0066680:CDS | 30.0% | |
| ! | TGGTTTCTAAAGAGTTTCAA+GGG | + | chr1_2:30718786-30718805 | Msa0066680:CDS | 30.0% |
| TTCGAGAAAGAAAAGAGAGA+AGG | - | chr1_2:30714457-30714476 | None:intergenic | 35.0% | |
| CACGTAACAGTAGAAGAAAA+GGG | - | chr1_2:30714483-30714502 | None:intergenic | 35.0% | |
| ! | GTTTGATAGCATAGGAATCA+AGG | + | chr1_2:30714528-30714547 | Msa0066680:intron | 35.0% |
| AAAATATCAGCTAGAAGTGG+AGG | - | chr1_2:30714751-30714770 | None:intergenic | 35.0% | |
| ! | CGTAGAGAATGTTGCAATTT+TGG | - | chr1_2:30714850-30714869 | None:intergenic | 35.0% |
| TCCCTCACACTGTTTAAATT+CGG | + | chr1_2:30714982-30715001 | Msa0066680:intron | 35.0% | |
| GAAGGAAAGAGTTTAAATCC+TGG | + | chr1_2:30715289-30715308 | Msa0066680:intron | 35.0% | |
| TGTCACATATTCAACGCTTA+AGG | + | chr1_2:30715446-30715465 | Msa0066680:intron | 35.0% | |
| ACATATTCAACGCTTAAGGA+AGG | + | chr1_2:30715450-30715469 | Msa0066680:intron | 35.0% | |
| !! | TTTTGCTACTTGAAACCATG+AGG | + | chr1_2:30715637-30715656 | Msa0066680:intron | 35.0% |
| TCTTGAGTATTTGGCTAATG+TGG | + | chr1_2:30715858-30715877 | Msa0066680:intron | 35.0% | |
| ! | ACTCATGAAATGGTTTTTGC+TGG | + | chr1_2:30715932-30715951 | Msa0066680:intron | 35.0% |
| TTGAGGATGTTCCTAAGTAT+GGG | - | chr1_2:30715976-30715995 | None:intergenic | 35.0% | |
| TTTGAGGATGTTCCTAAGTA+TGG | - | chr1_2:30715977-30715996 | None:intergenic | 35.0% | |
| ACCTTTACTTACTAGGTGTT+GGG | - | chr1_2:30716108-30716127 | None:intergenic | 35.0% | |
| AACCTTTACTTACTAGGTGT+TGG | - | chr1_2:30716109-30716128 | None:intergenic | 35.0% | |
| TGCAGAAACCTTTACTTACT+AGG | - | chr1_2:30716115-30716134 | None:intergenic | 35.0% | |
| CTCTGATCTAATAGAAGTTC+TGG | + | chr1_2:30716147-30716166 | Msa0066680:intron | 35.0% | |
| ! | GCCAGATTTTTGTTAACCAT+GGG | + | chr1_2:30716169-30716188 | Msa0066680:intron | 35.0% |
| TCCCATGGTTAACAAAAATC+TGG | - | chr1_2:30716173-30716192 | None:intergenic | 35.0% | |
| TGATAAAATGGAGCAAATGG+GGG | - | chr1_2:30716215-30716234 | None:intergenic | 35.0% | |
| CTGATAAAATGGAGCAAATG+GGG | - | chr1_2:30716216-30716235 | None:intergenic | 35.0% | |
| GCTGATAAAATGGAGCAAAT+GGG | - | chr1_2:30716217-30716236 | None:intergenic | 35.0% | |
| TGCTGATAAAATGGAGCAAA+TGG | - | chr1_2:30716218-30716237 | None:intergenic | 35.0% | |
| !!! | CGTTTTGGGTTCAAATACAT+GGG | - | chr1_2:30716270-30716289 | None:intergenic | 35.0% |
| CCATGTATTTGAACCCAAAA+CGG | + | chr1_2:30716268-30716287 | Msa0066680:intron | 35.0% | |
| ! | GTATCTTATAGCAAGGCTTT+TGG | + | chr1_2:30716307-30716326 | Msa0066680:intron | 35.0% |
| ! | AAGGGTGCAGATATGAAAAA+GGG | + | chr1_2:30716892-30716911 | Msa0066680:intron | 35.0% |
| !! | TGAGATTTGGTGAACATTTG+AGG | - | chr1_2:30717061-30717080 | None:intergenic | 35.0% |
| GCGTGAAAATCCAATCAAAA+TGG | - | chr1_2:30717096-30717115 | None:intergenic | 35.0% | |
| TTCTTTCTCAGCGTTAAAAG+GGG | + | chr1_2:30717291-30717310 | Msa0066680:intron | 35.0% | |
| TTAGCTTACAATTGTGACCA+AGG | - | chr1_2:30717390-30717409 | None:intergenic | 35.0% | |
| ACAATTGTAAGCTAACCAGA+TGG | + | chr1_2:30717395-30717414 | Msa0066680:intron | 35.0% | |
| ! | CACTTTTATGGTTAAAGCTG+AGG | + | chr1_2:30717638-30717657 | Msa0066680:intron | 35.0% |
| ACAGGAAAATTAGTGCAGTT+TGG | - | chr1_2:30717703-30717722 | None:intergenic | 35.0% | |
| TCTTTACCTGCAATAAACAC+AGG | - | chr1_2:30717721-30717740 | None:intergenic | 35.0% | |
| !! | GCTTTTTCCTTGGAATTTAC+CGG | - | chr1_2:30717825-30717844 | None:intergenic | 35.0% |
| !! | TATGTTCAAGGCTTTTTCCT+TGG | - | chr1_2:30717835-30717854 | None:intergenic | 35.0% |
| TGAACATGAAGAAAGGGAAT+TGG | - | chr1_2:30717877-30717896 | None:intergenic | 35.0% | |
| !! | GTTTTAAATTGGGATTCGAG+GGG | - | chr1_2:30718188-30718207 | None:intergenic | 35.0% |
| ACTAAAGACAACAAAGTCGA+AGG | + | chr1_2:30718206-30718225 | Msa0066680:CDS | 35.0% | |
| ACCCGTTAATGAAATTATCC+AGG | + | chr1_2:30718355-30718374 | Msa0066680:CDS | 35.0% | |
| CCAAGATGCATTACAAAATC+GGG | - | chr1_2:30718386-30718405 | None:intergenic | 35.0% | |
| CCCAAGATGCATTACAAAAT+CGG | - | chr1_2:30718387-30718406 | None:intergenic | 35.0% | |
| ! | CCGATTTTGTAATGCATCTT+GGG | + | chr1_2:30718384-30718403 | Msa0066680:CDS | 35.0% |
| !! | AAAAGCACTTACGCTTTATG+TGG | + | chr1_2:30718472-30718491 | Msa0066680:CDS | 35.0% |
| CTTTATGTGGAAGCTGAAAA+GGG | + | chr1_2:30718485-30718504 | Msa0066680:CDS | 35.0% | |
| ACTTCTGAATCTGACTCAAT+TGG | + | chr1_2:30718509-30718528 | Msa0066680:CDS | 35.0% | |
| !! | AGCTTTGTTGAGAATTCAAG+TGG | + | chr1_2:30718554-30718573 | Msa0066680:CDS | 35.0% |
| CCAAAATCAACACCTAAACT+TGG | - | chr1_2:30718593-30718612 | None:intergenic | 35.0% | |
| !!! | CCAAGTTTAGGTGTTGATTT+TGG | + | chr1_2:30718590-30718609 | Msa0066680:CDS | 35.0% |
| ! | TGATGACGAGAATGTTGAAT+TGG | + | chr1_2:30718622-30718641 | Msa0066680:CDS | 35.0% |
| GATGACGAGAATGTTGAATT+GGG | + | chr1_2:30718623-30718642 | Msa0066680:CDS | 35.0% | |
| TCTTCAACTTCCAACTCAAT+AGG | - | chr1_2:30718695-30718714 | None:intergenic | 35.0% | |
| ! | GTGGTTTCTAAAGAGTTTCA+AGG | + | chr1_2:30718785-30718804 | Msa0066680:CDS | 35.0% |
| CTCAGAAACATGCGTTCAAT+GGG | - | chr1_2:30714347-30714366 | None:intergenic | 40.0% | |
| GAAAAGAGAGAAGGAAAACC+TGG | - | chr1_2:30714448-30714467 | None:intergenic | 40.0% | |
| GCACGTAACAGTAGAAGAAA+AGG | - | chr1_2:30714484-30714503 | None:intergenic | 40.0% | |
| TATTGCATGCCATGTGTTTG+AGG | + | chr1_2:30714646-30714665 | Msa0066680:intron | 40.0% | |
| CATGCATTTCCTCAAACACA+TGG | - | chr1_2:30714658-30714677 | None:intergenic | 40.0% | |
| ! | GAGAATGTTGCAATTTTGGG+TGG | - | chr1_2:30714846-30714865 | None:intergenic | 40.0% |
| ! | AGAGAGGTCTGAAACGTAAT+TGG | - | chr1_2:30714888-30714907 | None:intergenic | 40.0% |
| TCAAACTCTAGTGGTTAGAG+AGG | - | chr1_2:30714904-30714923 | None:intergenic | 40.0% | |
| AGTTTGTGGTCAAACTCTAG+TGG | - | chr1_2:30714913-30714932 | None:intergenic | 40.0% | |
| CATATCTTGCACGAAGTTTG+TGG | - | chr1_2:30714927-30714946 | None:intergenic | 40.0% | |
| CGTTAGTGAAGATATGCCTT+TGG | + | chr1_2:30714954-30714973 | Msa0066680:intron | 40.0% | |
| CCCGAATTTAAACAGTGTGA+GGG | - | chr1_2:30714986-30715005 | None:intergenic | 40.0% | |
| CCCTCACACTGTTTAAATTC+GGG | + | chr1_2:30714983-30715002 | Msa0066680:intron | 40.0% | |
| ACCCGAATTTAAACAGTGTG+AGG | - | chr1_2:30714987-30715006 | None:intergenic | 40.0% | |
| GGAAGGAAAATTGAGAACTC+CGG | + | chr1_2:30715467-30715486 | Msa0066680:intron | 40.0% | |
| GTTTATCTGGATAGGAACAC+CGG | - | chr1_2:30715489-30715508 | None:intergenic | 40.0% | |
| GATGATGCATACATTCCTCA+TGG | - | chr1_2:30715655-30715674 | None:intergenic | 40.0% | |
| ! | CATGAAATGGTTTTTGCTGG+TGG | + | chr1_2:30715935-30715954 | Msa0066680:intron | 40.0% |
| AGCTATGGTGGTATAGTTTG+AGG | - | chr1_2:30715993-30716012 | None:intergenic | 40.0% | |
| CATGAGAAGAAAAGCTATGG+TGG | - | chr1_2:30716005-30716024 | None:intergenic | 40.0% | |
| GGTCATGAGAAGAAAAGCTA+TGG | - | chr1_2:30716008-30716027 | None:intergenic | 40.0% | |
| CTCTTCAACTGTCAAGTGAT+AGG | - | chr1_2:30716029-30716048 | None:intergenic | 40.0% | |
| ACCCAACACCTAGTAAGTAA+AGG | + | chr1_2:30716104-30716123 | Msa0066680:intron | 40.0% | |
| ! | GGCCAGATTTTTGTTAACCA+TGG | + | chr1_2:30716168-30716187 | Msa0066680:intron | 40.0% |
| !!! | CCGTTTTGGGTTCAAATACA+TGG | - | chr1_2:30716271-30716290 | None:intergenic | 40.0% |
| ! | TTTCACCAAGGTTCCGTTTT+GGG | - | chr1_2:30716284-30716303 | None:intergenic | 40.0% |
| ! | ATTTCACCAAGGTTCCGTTT+TGG | - | chr1_2:30716285-30716304 | None:intergenic | 40.0% |
| !! | GCTTTTGGTAGTCACAATCA+AGG | + | chr1_2:30716322-30716341 | Msa0066680:intron | 40.0% |
| !! | AAGGTTCTAAAAAACGGTCG+CGG | + | chr1_2:30716341-30716360 | Msa0066680:intron | 40.0% |
| TGGCTCAGCTAGAATAAATC+TGG | + | chr1_2:30716783-30716802 | Msa0066680:intron | 40.0% | |
| !! | CTTTTTCATATCTGCACCCT+TGG | - | chr1_2:30716893-30716912 | None:intergenic | 40.0% |
| ! | CAAGGGTGCAGATATGAAAA+AGG | + | chr1_2:30716891-30716910 | Msa0066680:intron | 40.0% |
| AGGGTGCAGATATGAAAAAG+GGG | + | chr1_2:30716893-30716912 | Msa0066680:intron | 40.0% | |
| GTGCAAAAGCAACAGCATAT+AGG | + | chr1_2:30716917-30716936 | Msa0066680:intron | 40.0% | |
| AGCATATAGGACAAAACTGC+AGG | + | chr1_2:30716930-30716949 | Msa0066680:intron | 40.0% | |
| ATATAGGACAAAACTGCAGG+TGG | + | chr1_2:30716933-30716952 | Msa0066680:intron | 40.0% | |
| TATAGGACAAAACTGCAGGT+GGG | + | chr1_2:30716934-30716953 | Msa0066680:intron | 40.0% | |
| ACGTGAAGAAAGGAAGAAGA+AGG | - | chr1_2:30716994-30717013 | None:intergenic | 40.0% | |
| GTTGTACTTCACGTGAAGAA+AGG | - | chr1_2:30717004-30717023 | None:intergenic | 40.0% | |
| AGCGTTAAAAGGGGCAAAAA+CGG | + | chr1_2:30717300-30717319 | Msa0066680:intron | 40.0% | |
| AAAAGGGGCAAAAACGGTAA+CGG | + | chr1_2:30717306-30717325 | Msa0066680:intron | 40.0% | |
| CAAAAACGGCCGTTACAAAT+CGG | - | chr1_2:30717344-30717363 | None:intergenic | 40.0% | |
| !!! | ATTTGTAACGGCCGTTTTTG+TGG | + | chr1_2:30717344-30717363 | Msa0066680:intron | 40.0% |
| !!! | CGTCCCGTTTTTTAAAACCT+TGG | + | chr1_2:30717370-30717389 | Msa0066680:intron | 40.0% |
| ATAGGAAGTTTAGAAGCCCT+AGG | + | chr1_2:30717597-30717616 | Msa0066680:intron | 40.0% | |
| CGTAACATCAGCTCATTGAT+TGG | + | chr1_2:30717742-30717761 | Msa0066680:intron | 40.0% | |
| CATTGTTGCTGGTATGTTCA+AGG | - | chr1_2:30717847-30717866 | None:intergenic | 40.0% | |
| ACATGAAGAAAGGGAATTGG+TGG | - | chr1_2:30717874-30717893 | None:intergenic | 40.0% | |
| GAAGAGGGAAAGTGAGAATT+TGG | - | chr1_2:30717916-30717935 | None:intergenic | 40.0% | |
| !! | AAAGAGAAGAGGGTGTTTGT+GGG | - | chr1_2:30717969-30717988 | None:intergenic | 40.0% |
| ! | GATGGGTTTGAAAGAGAAGA+GGG | - | chr1_2:30717979-30717998 | None:intergenic | 40.0% |
| !! | TGATGGGTTTGAAAGAGAAG+AGG | - | chr1_2:30717980-30717999 | None:intergenic | 40.0% |
| ! | TTTTGTTGGGAGTGATTGGA+AGG | - | chr1_2:30718003-30718022 | None:intergenic | 40.0% |
| ! | AGTGGTGATGATGATGATGA+TGG | - | chr1_2:30718035-30718054 | None:intergenic | 40.0% |
| !! | CGATTTCTTGAAGCTTTGGA+GGG | - | chr1_2:30718091-30718110 | None:intergenic | 40.0% |
| ! | ACGATTTCTTGAAGCTTTGG+AGG | - | chr1_2:30718092-30718111 | None:intergenic | 40.0% |
| !! | AGCTGTTCGTATTTGGCTTT+GGG | - | chr1_2:30718140-30718159 | None:intergenic | 40.0% |
| ! | AAGCTGTTCGTATTTGGCTT+TGG | - | chr1_2:30718141-30718160 | None:intergenic | 40.0% |
| GAAGAGAAGCTGTTCGTATT+TGG | - | chr1_2:30718147-30718166 | None:intergenic | 40.0% | |
| TACGAACAGCTTCTCTTCTA+CGG | + | chr1_2:30718149-30718168 | Msa0066680:CDS | 40.0% | |
| GTTTCTTTCACCATCCAAGT+AGG | - | chr1_2:30718258-30718277 | None:intergenic | 40.0% | |
| CGTTGTCTATGAAGCTGATT+CGG | + | chr1_2:30718277-30718296 | Msa0066680:CDS | 40.0% | |
| ! | TTACTCGTTCAAGGCTTTTC+AGG | + | chr1_2:30718329-30718348 | Msa0066680:CDS | 40.0% |
| ! | CCCGATTTTGTAATGCATCT+TGG | + | chr1_2:30718383-30718402 | Msa0066680:CDS | 40.0% |
| GCTTTATGTGGAAGCTGAAA+AGG | + | chr1_2:30718484-30718503 | Msa0066680:CDS | 40.0% | |
| AACATTCTCGTCATCAACCT+CGG | - | chr1_2:30718618-30718637 | None:intergenic | 40.0% | |
| ACGAGAATGTTGAATTGGGA+GGG | + | chr1_2:30718627-30718646 | Msa0066680:CDS | 40.0% | |
| GATGTGTCTTATCAACATGC+TGG | + | chr1_2:30718713-30718732 | Msa0066680:CDS | 40.0% | |
| AGAGTTTCAAGGGAAGAGTT+TGG | + | chr1_2:30718796-30718815 | Msa0066680:CDS | 40.0% | |
| AAGGGAAGAGTTTGGTTAAG+AGG | + | chr1_2:30718804-30718823 | Msa0066680:CDS | 40.0% | |
| ! | AGAGTTTGGTTAAGAGGCAT+AGG | + | chr1_2:30718810-30718829 | Msa0066680:CDS | 40.0% |
| !! | TAGCTTGCTTCAAGATGAGT+TGG | + | chr1_2:30718841-30718860 | Msa0066680:CDS | 40.0% |
| ! | CTTCAAGATGAGTTGGATTC+TGG | + | chr1_2:30718848-30718867 | Msa0066680:CDS | 40.0% |
| GCTCAGAAACATGCGTTCAA+TGG | - | chr1_2:30714348-30714367 | None:intergenic | 45.0% | |
| ! | ACGGAGTATCTCACTGTTTG+CGG | - | chr1_2:30714425-30714444 | None:intergenic | 45.0% |
| AGAGAGAAGGAAAACCTGGA+CGG | - | chr1_2:30714444-30714463 | None:intergenic | 45.0% | |
| !! | TGTTGCAATTTTGGGTGGCT+CGG | - | chr1_2:30714841-30714860 | None:intergenic | 45.0% |
| TGTTACCTCATGACAGCATG+TGG | - | chr1_2:30715269-30715288 | None:intergenic | 45.0% | |
| TGCTGTCATGAGGTAACAGA+AGG | + | chr1_2:30715271-30715290 | Msa0066680:intron | 45.0% | |
| ATGGAAGGTTGAGAATCCCA+TGG | - | chr1_2:30716188-30716207 | None:intergenic | 45.0% | |
| TTGAACCCAAAACGGAACCT+TGG | + | chr1_2:30716276-30716295 | Msa0066680:intron | 45.0% | |
| CGTTAAGGTTGTCGCGATTT+CGG | + | chr1_2:30716379-30716398 | Msa0066680:intron | 45.0% | |
| GGACGCTGCGATACAAATAA+CGG | + | chr1_2:30716409-30716428 | Msa0066680:intron | 45.0% | |
| TGGACCACTTGATGCATCAA+GGG | + | chr1_2:30716803-30716822 | Msa0066680:intron | 45.0% | |
| GGGTGCAGATATGAAAAAGG+GGG | + | chr1_2:30716894-30716913 | Msa0066680:intron | 45.0% | |
| GGTGCAGATATGAAAAAGGG+GGG | + | chr1_2:30716895-30716914 | Msa0066680:intron | 45.0% | |
| TTCAAGTCAGAACGGCGTAA+CGG | + | chr1_2:30717193-30717212 | Msa0066680:intron | 45.0% | |
| !! | TTACAAATCGGTATCGGCAG+CGG | - | chr1_2:30717332-30717351 | None:intergenic | 45.0% |
| !! | CTGCCGATACCGATTTGTAA+CGG | + | chr1_2:30717332-30717351 | Msa0066680:intron | 45.0% |
| ACGGGACGTTACCACAAAAA+CGG | - | chr1_2:30717358-30717377 | None:intergenic | 45.0% | |
| ACCAGATGGTTCATAAACCG+AGG | + | chr1_2:30717409-30717428 | Msa0066680:intron | 45.0% | |
| ACCTCGGTTTATGAACCATC+TGG | - | chr1_2:30717413-30717432 | None:intergenic | 45.0% | |
| ACGAGAAGAACCTGGAACTT+GGG | + | chr1_2:30717771-30717790 | Msa0066680:intron | 45.0% | |
| GTTTGGTCCGGTAAATTCCA+AGG | + | chr1_2:30717815-30717834 | Msa0066680:intron | 45.0% | |
| ! | TTGGTGGACATCATTGTTGC+TGG | - | chr1_2:30717858-30717877 | None:intergenic | 45.0% |
| !! | GAAAGAGAAGAGGGTGTTTG+TGG | - | chr1_2:30717970-30717989 | None:intergenic | 45.0% |
| !!! | GTGGTTTTGTTGGGAGTGAT+TGG | - | chr1_2:30718007-30718026 | None:intergenic | 45.0% |
| !!! | ATGGTGGTGGTGGTTTTGTT+GGG | - | chr1_2:30718016-30718035 | None:intergenic | 45.0% |
| !! | GATGATGATGATGATGGTGG+TGG | - | chr1_2:30718029-30718048 | None:intergenic | 45.0% |
| !! | GGTGATGATGATGATGATGG+TGG | - | chr1_2:30718032-30718051 | None:intergenic | 45.0% |
| !! | GAGTTCTTCGATGGGTTGAA+GGG | - | chr1_2:30718069-30718088 | None:intergenic | 45.0% |
| TTTGGAGGGAGTTCTTCGAT+GGG | - | chr1_2:30718077-30718096 | None:intergenic | 45.0% | |
| !! | TTTGGCTTTGGGTTCTTGCA+CGG | - | chr1_2:30718129-30718148 | None:intergenic | 45.0% |
| AAGGTTGTGTCTCTCAGGTT+TGG | + | chr1_2:30718225-30718244 | Msa0066680:CDS | 45.0% | |
| AGGTTGTGTCTCTCAGGTTT+GGG | + | chr1_2:30718226-30718245 | Msa0066680:CDS | 45.0% | |
| TTTCACCATCCAAGTAGGCT+CGG | - | chr1_2:30718253-30718272 | None:intergenic | 45.0% | |
| TCGGATTCTGTTCTCACCAA+AGG | + | chr1_2:30718296-30718315 | Msa0066680:CDS | 45.0% | |
| CGGATTCTGTTCTCACCAAA+GGG | + | chr1_2:30718297-30718316 | Msa0066680:CDS | 45.0% | |
| TTACAAAATCGGGTGTGACC+TGG | - | chr1_2:30718376-30718395 | None:intergenic | 45.0% | |
| CTAAACTTGGGGTCACAGAA+GGG | - | chr1_2:30718580-30718599 | None:intergenic | 45.0% | |
| !!! | AGGTGTTGATTTTGGTTCCG+AGG | + | chr1_2:30718598-30718617 | Msa0066680:CDS | 45.0% |
| GACGAGAATGTTGAATTGGG+AGG | + | chr1_2:30718626-30718645 | Msa0066680:CDS | 45.0% | |
| AATGTTGAATTGGGAGGGAG+AGG | + | chr1_2:30718632-30718651 | Msa0066680:CDS | 45.0% | |
| ATGTTGAATTGGGAGGGAGA+GGG | + | chr1_2:30718633-30718652 | Msa0066680:CDS | 45.0% | |
| GGAACTTCAGCCTATTGAGT+TGG | + | chr1_2:30718682-30718701 | Msa0066680:CDS | 45.0% | |
| TATCAACATGCTGGACATGC+TGG | + | chr1_2:30718722-30718741 | Msa0066680:CDS | 45.0% | |
| !! | AAAAAAAATAATAATATGTT+AGG | + | chr1_2:30714294-30714313 | Msa0066680:five_prime_UTR | 5.0% |
| GCAGACTGAACGAACTCAAC+CGG | + | chr1_2:30714366-30714385 | Msa0066680:CDS | 50.0% | |
| ! | CAAACTCCAGTGGCGTTTTC+CGG | - | chr1_2:30714392-30714411 | None:intergenic | 50.0% |
| AACAGTGAGATACTCCGTCC+AGG | + | chr1_2:30714427-30714446 | Msa0066680:CDS | 50.0% | |
| CTTCTACTGTTACGTGCGTG+AGG | + | chr1_2:30714487-30714506 | Msa0066680:intron | 50.0% | |
| AGTGTGAGGGAGCAATCCAA+AGG | - | chr1_2:30714973-30714992 | None:intergenic | 50.0% | |
| TGCTTCCACATGCTGTCATG+AGG | + | chr1_2:30715261-30715280 | Msa0066680:intron | 50.0% | |
| ! | GCAAATGGGGGAAGTATGGA+AGG | - | chr1_2:30716203-30716222 | None:intergenic | 50.0% |
| TGGAGCAAATGGGGGAAGTA+TGG | - | chr1_2:30716207-30716226 | None:intergenic | 50.0% | |
| ! | TCAAATACATGGGCTGCCTC+CGG | - | chr1_2:30716260-30716279 | None:intergenic | 50.0% |
| TGTCGCGATTTCGGCTGTAA+CGG | + | chr1_2:30716388-30716407 | Msa0066680:intron | 50.0% | |
| CTGGACCACTTGATGCATCA+AGG | + | chr1_2:30716802-30716821 | Msa0066680:intron | 50.0% | |
| GGACCACTTGATGCATCAAG+GGG | + | chr1_2:30716804-30716823 | Msa0066680:intron | 50.0% | |
| TGGCTGTGATGAGCCTATGT+AGG | - | chr1_2:30716843-30716862 | None:intergenic | 50.0% | |
| GGCGTTCAGTAACGCTGTAA+CGG | + | chr1_2:30717252-30717271 | Msa0066680:intron | 50.0% | |
| CGGCCGTTACAAATCGGTAT+CGG | - | chr1_2:30717338-30717357 | None:intergenic | 50.0% | |
| ! | GGCTTTTGACGAGAAGAACC+TGG | + | chr1_2:30717763-30717782 | Msa0066680:intron | 50.0% |
| GACGAGAAGAACCTGGAACT+TGG | + | chr1_2:30717770-30717789 | Msa0066680:intron | 50.0% | |
| GGGAGTGATTGGAAGGTGAT+GGG | - | chr1_2:30717996-30718015 | None:intergenic | 50.0% | |
| TGGGAGTGATTGGAAGGTGA+TGG | - | chr1_2:30717997-30718016 | None:intergenic | 50.0% | |
| !!! | GATGGTGGTGGTGGTTTTGT+TGG | - | chr1_2:30718017-30718036 | None:intergenic | 50.0% |
| !! | GATGATGATGATGGTGGTGG+TGG | - | chr1_2:30718026-30718045 | None:intergenic | 50.0% |
| TGAAGGGAAGTGGATGGAAG+TGG | - | chr1_2:30718053-30718072 | None:intergenic | 50.0% | |
| ! | ATGGGTTGAAGGGAAGTGGA+TGG | - | chr1_2:30718059-30718078 | None:intergenic | 50.0% |
| !! | TTCGATGGGTTGAAGGGAAG+TGG | - | chr1_2:30718063-30718082 | None:intergenic | 50.0% |
| !! | GGAGTTCTTCGATGGGTTGA+AGG | - | chr1_2:30718070-30718089 | None:intergenic | 50.0% |
| ! | CTTTGGAGGGAGTTCTTCGA+TGG | - | chr1_2:30718078-30718097 | None:intergenic | 50.0% |
| !! | GTTCTTGCACGGATTGGAAG+AGG | - | chr1_2:30718118-30718137 | None:intergenic | 50.0% |
| ! | CTTTGGGTTCTTGCACGGAT+TGG | - | chr1_2:30718124-30718143 | None:intergenic | 50.0% |
| ATTGGGATTCGAGGGGTTTG+AGG | - | chr1_2:30718181-30718200 | None:intergenic | 50.0% | |
| AGTCGAAGGTTGTGTCTCTC+AGG | + | chr1_2:30718220-30718239 | Msa0066680:CDS | 50.0% | |
| ! | CTCGCTGCTTTACTCGTTCA+AGG | + | chr1_2:30718320-30718339 | Msa0066680:CDS | 50.0% |
| CCTAAACTTGGGGTCACAGA+AGG | - | chr1_2:30718581-30718600 | None:intergenic | 50.0% | |
| CCTTCTGTGACCCCAAGTTT+AGG | + | chr1_2:30718578-30718597 | Msa0066680:CDS | 50.0% | |
| AGGGAGAGGGAAGAGGATAA+AGG | + | chr1_2:30718646-30718665 | Msa0066680:CDS | 50.0% | |
| ! | CTGGACATGCTGGTGTTAGA+GGG | + | chr1_2:30718732-30718751 | Msa0066680:CDS | 50.0% |
| !! | CATCCTTCACCGACTTCAGA+AGG | - | chr1_2:30718905-30718924 | None:intergenic | 50.0% |
| ACTGAACGAACTCAACCGGC+CGG | + | chr1_2:30714370-30714389 | Msa0066680:CDS | 55.0% | |
| AACGCCACTGGAGTTTGTCG+TGG | + | chr1_2:30714395-30714414 | Msa0066680:CDS | 55.0% | |
| ACGCCACTGGAGTTTGTCGT+GGG | + | chr1_2:30714396-30714415 | Msa0066680:CDS | 55.0% | |
| !! | GCAATTTTGGGTGGCTCGGA+TGG | - | chr1_2:30714837-30714856 | None:intergenic | 55.0% |
| ! | GTTTTTGCTGGTGGCACTCC+CGG | + | chr1_2:30715944-30715963 | Msa0066680:intron | 55.0% |
| TCCTAAGTATGGGCCTCAGC+CGG | - | chr1_2:30715966-30715985 | None:intergenic | 55.0% | |
| GGACCCCTTGATGCATCAAG+TGG | - | chr1_2:30716810-30716829 | None:intergenic | 55.0% | |
| CTTCCTTCCTTGTTGACCGC+GGG | - | chr1_2:30716961-30716980 | None:intergenic | 55.0% | |
| CCTTCCTTCCTTGTTGACCG+CGG | - | chr1_2:30716962-30716981 | None:intergenic | 55.0% | |
| CGGTCAACAAGGAAGGAAGG+AGG | + | chr1_2:30716962-30716981 | Msa0066680:intron | 55.0% | |
| AGAACCTGGAACTTGGGACC+TGG | + | chr1_2:30717777-30717796 | Msa0066680:intron | 55.0% | |
| GAACCTGGAACTTGGGACCT+GGG | + | chr1_2:30717778-30717797 | Msa0066680:intron | 55.0% | |
| AAACCCAGGTCCCAAGTTCC+AGG | - | chr1_2:30717784-30717803 | None:intergenic | 55.0% | |
| GAGTAAAGCAGCGAGCCCTT+TGG | - | chr1_2:30718315-30718334 | None:intergenic | 55.0% | |
| AATTGGGAGGGAGAGGGAAG+AGG | + | chr1_2:30718639-30718658 | Msa0066680:CDS | 55.0% | |
| ! | GCTGGACATGCTGGTGTTAG+AGG | + | chr1_2:30718731-30718750 | Msa0066680:CDS | 55.0% |
| !! | GCCAAGACGCCTTCTGAAGT+CGG | + | chr1_2:30718893-30718912 | Msa0066680:CDS | 55.0% |
| !! | ACCGACTTCAGAAGGCGTCT+TGG | - | chr1_2:30718897-30718916 | None:intergenic | 55.0% |
| !! | ACGCCTTCTGAAGTCGGTGA+AGG | + | chr1_2:30718899-30718918 | Msa0066680:CDS | 55.0% |
| CTGCCCACGACAAACTCCAG+TGG | - | chr1_2:30714402-30714421 | None:intergenic | 60.0% | |
| CCTAAGTATGGGCCTCAGCC+GGG | - | chr1_2:30715965-30715984 | None:intergenic | 60.0% | |
| AAAACTGCAGGTGGGACCCG+CGG | + | chr1_2:30716942-30716961 | Msa0066680:intron | 60.0% | |
| CCGCGGTCAACAAGGAAGGA+AGG | + | chr1_2:30716959-30716978 | Msa0066680:intron | 60.0% | |
| AACGGCGTAACGGCGTTTCG+CGG | + | chr1_2:30717203-30717222 | Msa0066680:intron | 60.0% | |
| ACGACCGCGAAACGCCGTTA+CGG | - | chr1_2:30717229-30717248 | None:intergenic | 60.0% | |
| ACGGCGTTTCGCGGTCGTAA+CGG | + | chr1_2:30717231-30717250 | Msa0066680:intron | 60.0% | |
| GGTTTGGGTCCGAGCCTACT+TGG | + | chr1_2:30718241-30718260 | Msa0066680:CDS | 60.0% | |
| TGGGTCCGAGCCTACTTGGA+TGG | + | chr1_2:30718245-30718264 | Msa0066680:CDS | 60.0% | |
| ! | GCTGGTGTTAGAGGGAGCGA+TGG | + | chr1_2:30718740-30718759 | Msa0066680:CDS | 60.0% |
| AACCGGCCGGAAAACGCCAC+TGG | + | chr1_2:30714383-30714402 | Msa0066680:CDS | 65.0% | |
| ! | CTCCAGTGGCGTTTTCCGGC+CGG | - | chr1_2:30714388-30714407 | None:intergenic | 65.0% |
| CCCGGCTGAGGCCCATACTT+AGG | + | chr1_2:30715962-30715981 | Msa0066680:intron | 65.0% | |
| TCGCGATCGCGGTCGCGTTA+AGG | + | chr1_2:30716364-30716383 | Msa0066680:intron | 65.0% | |
| GGACCCGCGGTCAACAAGGA+AGG | + | chr1_2:30716955-30716974 | Msa0066680:intron | 65.0% | |
| ACGGCGTTTCGCGGCCGTAA+CGG | + | chr1_2:30717212-30717231 | Msa0066680:intron | 65.0% | |
| AACGGTCGCGGTCGCGATCG+CGG | + | chr1_2:30716353-30716372 | Msa0066680:intron | 70.0% | |
| GGTGGGACCCGCGGTCAACA+AGG | + | chr1_2:30716951-30716970 | Msa0066680:intron | 70.0% | |
| GCGGCCGTAACGGCGTTTCG+CGG | + | chr1_2:30717222-30717241 | Msa0066680:intron | 70.0% | |
| GCTGGTGGCACTCCCGGCTG+AGG | + | chr1_2:30715950-30715969 | Msa0066680:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 30714266 | 30718925 | 30714266 | ID=Msa0066680;Name=Msa0066680 |
| chr1_2 | mRNA | 30714266 | 30718925 | 30714266 | ID=Msa0066680-mRNA-1;Parent=Msa0066680;Name=Msa0066680-mRNA-1;_AED=0.15;_eAED=0.15;_QI=90|0|0.25|0.75|1|1|4|0|429 |
| chr1_2 | exon | 30714266 | 30714448 | 30714266 | ID=Msa0066680-mRNA-1:exon:10196;Parent=Msa0066680-mRNA-1 |
| chr1_2 | exon | 30714819 | 30714917 | 30714819 | ID=Msa0066680-mRNA-1:exon:10197;Parent=Msa0066680-mRNA-1 |
| chr1_2 | exon | 30717734 | 30717742 | 30717734 | ID=Msa0066680-mRNA-1:exon:10198;Parent=Msa0066680-mRNA-1 |
| chr1_2 | exon | 30717837 | 30718925 | 30717837 | ID=Msa0066680-mRNA-1:exon:10199;Parent=Msa0066680-mRNA-1 |
| chr1_2 | five_prime_UTR | 30714266 | 30714355 | 30714266 | ID=Msa0066680-mRNA-1:five_prime_utr;Parent=Msa0066680-mRNA-1 |
| chr1_2 | CDS | 30714356 | 30714448 | 30714356 | ID=Msa0066680-mRNA-1:cds;Parent=Msa0066680-mRNA-1 |
| chr1_2 | CDS | 30714819 | 30714917 | 30714819 | ID=Msa0066680-mRNA-1:cds;Parent=Msa0066680-mRNA-1 |
| chr1_2 | CDS | 30717734 | 30717742 | 30717734 | ID=Msa0066680-mRNA-1:cds;Parent=Msa0066680-mRNA-1 |
| chr1_2 | CDS | 30717837 | 30718925 | 30717837 | ID=Msa0066680-mRNA-1:cds;Parent=Msa0066680-mRNA-1 |
| Gene Sequence |
| Protein sequence |
