Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1347430 | XP_003602457.1 | 98.283 | 233 | 4 | 0 | 1 | 233 | 1 | 233 | 4.60e-163 | 460 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1347430 | sp|P34091|RL6_MESCR | 79.741 | 232 | 47 | 0 | 2 | 233 | 3 | 234 | 8.94e-126 | 358 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1347430 | G7J9R6 | 98.283 | 233 | 4 | 0 | 1 | 233 | 1 | 233 | 2.19e-163 | 460 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001760 | Msa1347430 | 0.811110 | 8.245767e-51 | -8.615850e-47 |
| Msa0021290 | Msa1347430 | 0.805948 | 1.043230e-49 | -8.615850e-47 |
| Msa0708630 | Msa1347430 | 0.827701 | 1.352611e-54 | -8.615850e-47 |
| Msa0132460 | Msa1347430 | 0.828366 | 9.355747e-55 | -8.615850e-47 |
| Msa0182050 | Msa1347430 | 0.825752 | 3.950133e-54 | -8.615850e-47 |
| Msa1284060 | Msa1347430 | 0.855166 | 7.569086e-62 | -8.615850e-47 |
| Msa0377520 | Msa1347430 | 0.867626 | 1.191303e-65 | -8.615850e-47 |
| Msa0473390 | Msa1347430 | 0.997110 | 4.843826e-237 | -8.615850e-47 |
| Msa0315430 | Msa1347430 | 0.813367 | 2.652702e-51 | -8.615850e-47 |
| Msa1116940 | Msa1347430 | 0.822807 | 1.943765e-53 | -8.615850e-47 |
| Msa0517480 | Msa1347430 | 0.839405 | 1.615743e-57 | -8.615850e-47 |
| Msa0929680 | Msa1347430 | 0.826540 | 2.565550e-54 | -8.615850e-47 |
| Msa0929700 | Msa1347430 | 0.807661 | 4.533183e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1347430 | MtrunA17_Chr3g0129031 | 98.283 | 233 | 4 | 0 | 1 | 233 | 1 | 233 | 4.23e-167 | 460 |
| Msa1347430 | MtrunA17_Chr3g0129231 | 98.283 | 233 | 4 | 0 | 1 | 233 | 1 | 233 | 9.11e-167 | 459 |
| Msa1347430 | MtrunA17_Chr5g0448021 | 85.043 | 234 | 34 | 1 | 1 | 233 | 1 | 234 | 7.53e-142 | 396 |
| Msa1347430 | MtrunA17_Chr8g0383131 | 86.391 | 169 | 22 | 1 | 1 | 168 | 1 | 169 | 1.33e-101 | 293 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1347430 | AT1G74060.1 | 79.828 | 233 | 47 | 0 | 1 | 233 | 1 | 233 | 6.39e-121 | 343 |
| Msa1347430 | AT1G74050.1 | 79.828 | 233 | 47 | 0 | 1 | 233 | 1 | 233 | 1.32e-120 | 343 |
| Msa1347430 | AT1G18540.1 | 78.112 | 233 | 51 | 0 | 1 | 233 | 1 | 233 | 8.52e-114 | 325 |
Find 83 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTCTTGCTGGAAGATTTA+AGG | 0.132093 | tig0009740:+11757 | Msa1347430:CDS |
| TTTCTCAAACAGCTTCCTTC+TGG | 0.232559 | tig0009740:+11794 | Msa1347430:CDS |
| GGCTTCTCGGCCGGAGCTGC+AGG | 0.250032 | tig0009740:-10906 | Msa1347420:CDS |
| TTAGGTCCATTCAAGATTAA+TGG | 0.250233 | tig0009740:+13447 | Msa1347430:intron |
| AACCTGAGCTTAGTGGGTTT+TGG | 0.276883 | tig0009740:-10984 | Msa1347420:CDS |
| CAAGAGGACAAAATATATTA+AGG | 0.311546 | tig0009740:-14006 | None:intergenic |
| CTTCTTGCTGGAAGATTTAA+GGG | 0.311988 | tig0009740:+11758 | Msa1347430:CDS |
| TCTGGACTTCTTCTTGTTAC+CGG | 0.344596 | tig0009740:+11812 | Msa1347430:CDS |
| GGCTTCTTCACGTCGTCGGC+GGG | 0.353564 | tig0009740:-10942 | Msa1347420:CDS |
| TGGCTTCACACCTGCCTTCA+AGG | 0.355239 | tig0009740:-13824 | None:intergenic |
| CCCCTTGAGACGTGTGAATC+AGG | 0.357560 | tig0009740:+13473 | Msa1347430:CDS |
| ATTGTCTTCAACTAGGGTTT+AGG | 0.357564 | tig0009740:+10672 | Msa1347430:five_prime_UTR |
| GTATGGTATGCCAGCAATAA+AGG | 0.357845 | tig0009740:-14054 | None:intergenic |
| TGTATCACAAACGTGGTCTC+TGG | 0.360563 | tig0009740:+10829 | Msa1347430:CDS |
| CGAGTTCTTTGAGGCAGATA+AGG | 0.375748 | tig0009740:+13608 | Msa1347430:CDS |
| CAAGTCTGGAACACTGTCAA+TGG | 0.377541 | tig0009740:-13776 | None:intergenic |
| ACAGTGTTGATTCTTCTTGC+TGG | 0.383364 | tig0009740:+11746 | Msa1347430:CDS |
| CCGATACCCCTGATCAAGTC+AGG | 0.389802 | tig0009740:-10786 | Msa1347420:intron |
| GCCGTAACCCTGACTTGATC+AGG | 0.402373 | tig0009740:+10778 | Msa1347430:CDS |
| TTCAGGGCTTCTATTACTCC+AGG | 0.405045 | tig0009740:+11722 | Msa1347430:intron |
| GTGAATCAGGCTTATGTTAT+CGG | 0.407883 | tig0009740:+13486 | Msa1347430:CDS |
| AAAAGCATTGTCTTCAACTA+GGG | 0.425787 | tig0009740:+10666 | Msa1347430:five_prime_UTR |
| CAAAAGCATTGTCTTCAACT+AGG | 0.442339 | tig0009740:+10665 | Msa1347430:five_prime_UTR |
| ACTAGGGTTTAGGTTTAGAC+AGG | 0.445812 | tig0009740:+10682 | Msa1347430:five_prime_UTR |
| AACCGAAGAAATATCTACTT+TGG | 0.446745 | tig0009740:-13517 | None:intergenic |
| TACCAAAGTAGATATTTCTT+CGG | 0.451633 | tig0009740:+13515 | Msa1347430:CDS |
| AGAAGAATCAACACTGTCCC+TGG | 0.473766 | tig0009740:-11740 | None:intergenic |
| TGCCATTGCTATTGGTGTGA+TGG | 0.475430 | tig0009740:-10730 | Msa1347420:intron |
| GATCATCTTTCTTCTCCTGA+GGG | 0.477455 | tig0009740:-13723 | None:intergenic |
| AACTTAGGCGGCTTCTCGGC+CGG | 0.480002 | tig0009740:-10915 | Msa1347420:CDS |
| CGTCGCTAAGCCTGCAGCTC+CGG | 0.482998 | tig0009740:+10896 | Msa1347430:CDS |
| CCTGACTTGATCAGGGGTAT+CGG | 0.491288 | tig0009740:+10786 | Msa1347430:CDS |
| GCCATTGCTATTGGTGTGAT+GGG | 0.491348 | tig0009740:-10729 | Msa1347420:intron |
| GGGACTCCATTAATCTTGAA+TGG | 0.491418 | tig0009740:-13453 | None:intergenic |
| TGATCATCTTTCTTCTCCTG+AGG | 0.494574 | tig0009740:-13724 | None:intergenic |
| TGAAAACTTACCTAGGTGCC+AGG | 0.495019 | tig0009740:+13797 | Msa1347430:CDS |
| GTAAAACTTAGGCGGCTTCT+CGG | 0.498660 | tig0009740:-10919 | Msa1347420:CDS |
| CACATGAGTTGGTCTTCTAA+AGG | 0.499867 | tig0009740:+13845 | Msa1347430:CDS |
| GGGAGAGAGCGAGTTCTTTG+AGG | 0.505471 | tig0009740:+13599 | Msa1347430:CDS |
| ACGTGGTCTCTGGGCAATCA+AGG | 0.510085 | tig0009740:+10839 | Msa1347430:CDS |
| TTGCTATTGGTGTGATGGGA+TGG | 0.510238 | tig0009740:-10725 | Msa1347420:intron |
| ACCTGCCTTCAAGGAAAACC+TGG | 0.516282 | tig0009740:-13815 | None:intergenic |
| GGTGACGAACCTGAGCTTAG+TGG | 0.517641 | tig0009740:-10991 | Msa1347420:CDS |
| TGGCTTCTTCACGTCGTCGG+CGG | 0.523746 | tig0009740:-10943 | Msa1347420:CDS |
| CCCTGATCAAGTCAGGGTTA+CGG | 0.525127 | tig0009740:-10779 | Msa1347420:intron |
| CGGAGCTGCAGGCTTAGCGA+CGG | 0.526524 | tig0009740:-10895 | Msa1347420:CDS |
| GTATCACAAACGTGGTCTCT+GGG | 0.530303 | tig0009740:+10830 | Msa1347430:CDS |
| AGCCTGATTCACACGTCTCA+AGG | 0.531824 | tig0009740:-13475 | None:intergenic |
| GATCAAAAGACTGTCGATGC+TGG | 0.534143 | tig0009740:+13742 | Msa1347430:CDS |
| GGAGCTGCAGGCTTAGCGAC+GGG | 0.545817 | tig0009740:-10894 | Msa1347420:CDS |
| GTGACGAACCTGAGCTTAGT+GGG | 0.562791 | tig0009740:-10990 | Msa1347420:CDS |
| GCCTGATTCACACGTCTCAA+GGG | 0.568583 | tig0009740:-13474 | None:intergenic |
| CAGGCTTAGCGACGGGATCG+TGG | 0.569427 | tig0009740:-10887 | Msa1347420:CDS |
| CCGTAACCCTGACTTGATCA+GGG | 0.572652 | tig0009740:+10779 | Msa1347430:CDS |
| ATAAAACCAAATGGTTCAAG+AGG | 0.575071 | tig0009740:-14022 | None:intergenic |
| TGATGACAAGTATTTCTCAA+AGG | 0.576844 | tig0009740:+13554 | Msa1347430:CDS |
| TAGCGACGGGATCGTGGCGA+GGG | 0.582049 | tig0009740:-10881 | Msa1347420:CDS |
| AGCCAAAACCCACTAAGCTC+AGG | 0.582122 | tig0009740:+10982 | Msa1347430:CDS |
| GAGTGGCTTCTTCACGTCGT+CGG | 0.583036 | tig0009740:-10946 | Msa1347420:CDS |
| TCAAGGAAAACCTGGCACCT+AGG | 0.589414 | tig0009740:-13807 | None:intergenic |
| GGTTTAGGTTTAGACAGGGA+GGG | 0.590416 | tig0009740:+10687 | Msa1347430:five_prime_UTR |
| GGCTTGTGCTTGTTGCGGAG+TGG | 0.594085 | tig0009740:-10963 | Msa1347420:CDS |
| TTAGCGACGGGATCGTGGCG+AGG | 0.595917 | tig0009740:-10882 | Msa1347420:CDS |
| TTAGGTTTAGACAGGGAGGG+AGG | 0.598908 | tig0009740:+10690 | Msa1347430:five_prime_UTR |
| CTAGGGTTTAGGTTTAGACA+GGG | 0.599669 | tig0009740:+10683 | Msa1347430:five_prime_UTR |
| CCAGACTTGAAAACTTACCT+AGG | 0.601511 | tig0009740:+13790 | Msa1347430:CDS |
| CGATACCCCTGATCAAGTCA+GGG | 0.606077 | tig0009740:-10785 | Msa1347420:intron |
| CTTTAGAAGACCAACTCATG+TGG | 0.608084 | tig0009740:-13844 | None:intergenic |
| AGGTGTGAAGCCACATGAGT+TGG | 0.608147 | tig0009740:+13834 | Msa1347430:CDS |
| GTTCTTTGAGGCAGATAAGG+AGG | 0.609313 | tig0009740:+13611 | Msa1347430:CDS |
| TCCCATCACACCAATAGCAA+TGG | 0.612369 | tig0009740:+10728 | Msa1347430:exon |
| GTAACAAGAAGAAGTCCAGA+AGG | 0.620622 | tig0009740:-11809 | None:intergenic |
| TCAGGGCTTCTATTACTCCA+GGG | 0.623428 | tig0009740:+11723 | Msa1347430:intron |
| GCTTCTTCACGTCGTCGGCG+GGG | 0.624269 | tig0009740:-10941 | Msa1347420:CDS |
| AGGGTTACGGCTCACTCTTG+CGG | 0.626952 | tig0009740:-10766 | Msa1347420:intron |
| TCGTCGGCGGGGTAAAACTT+AGG | 0.627965 | tig0009740:-10930 | Msa1347420:CDS |
| CCTGATTCACACGTCTCAAG+GGG | 0.635856 | tig0009740:-13473 | None:intergenic |
| GGGTTTAGGTTTAGACAGGG+AGG | 0.648737 | tig0009740:+10686 | Msa1347430:five_prime_UTR |
| TGGGCAATCAAGGCTAAGCA+CGG | 0.658739 | tig0009740:+10849 | Msa1347430:CDS |
| TCGGCGGGGTAAAACTTAGG+CGG | 0.660381 | tig0009740:-10927 | Msa1347420:CDS |
| CGTAACCCTGACTTGATCAG+GGG | 0.675659 | tig0009740:+10780 | Msa1347430:CDS |
| GCAATCAAGGCTAAGCACGG+TGG | 0.725321 | tig0009740:+10852 | Msa1347430:CDS |
| TCTGCTATGTATCACAAACG+TGG | 0.741302 | tig0009740:+10822 | Msa1347430:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATATTTATAATTACAGA+TGG | + | tig0009740:11362-11381 | Msa1347430:intron | 10.0% |
| !! | TATTGTCATATAAAATAATT+TGG | + | tig0009740:11918-11937 | Msa1347430:intron | 10.0% |
| !!! | AAATTTTATATGATATCTTC+AGG | + | tig0009740:11106-11125 | Msa1347430:intron | 15.0% |
| !! | ACAATTGTATATCTAATTAA+TGG | - | tig0009740:11292-11311 | None:intergenic | 15.0% |
| !! | CTCAAAATTAGAATAAAAAA+GGG | - | tig0009740:11563-11582 | None:intergenic | 15.0% |
| !! | TCTCAAAATTAGAATAAAAA+AGG | - | tig0009740:11564-11583 | None:intergenic | 15.0% |
| !! | TTTCTTAAAACAATAATTAC+CGG | - | tig0009740:11834-11853 | None:intergenic | 15.0% |
| !!! | TATATTTGTTTGTTGTATTA+TGG | + | tig0009740:11893-11912 | Msa1347430:intron | 15.0% |
| !!! | ATATTTGTTTGTTGTATTAT+GGG | + | tig0009740:11894-11913 | Msa1347430:intron | 15.0% |
| !! | TGTATTTGGTAAATATTATT+TGG | + | tig0009740:12001-12020 | Msa1347430:intron | 15.0% |
| !! | ATGTAAAGACTAAAAATATA+AGG | + | tig0009740:12290-12309 | Msa1347430:intron | 15.0% |
| !!! | AAATAGAAAATCTAGAATTA+TGG | - | tig0009740:12360-12379 | None:intergenic | 15.0% |
| !!! | ATAATTCTAGATTTTCTATT+TGG | + | tig0009740:12359-12378 | Msa1347430:intron | 15.0% |
| !!! | GACTAATTTTTTAATTCTTT+GGG | + | tig0009740:12454-12473 | Msa1347430:intron | 15.0% |
| !!! | ACTAATTTTTTAATTCTTTG+GGG | + | tig0009740:12455-12474 | Msa1347430:intron | 15.0% |
| !! | TATTTATTTATAGTTTCAAG+TGG | - | tig0009740:12502-12521 | None:intergenic | 15.0% |
| !! | ATTGATATGTTAAGATTAAA+AGG | + | tig0009740:12536-12555 | Msa1347430:intron | 15.0% |
| !!! | ATATACATTTTTTGTTTAGT+AGG | + | tig0009740:12690-12709 | Msa1347430:intron | 15.0% |
| !!! | AATTTTTAGAAATATTAGGA+TGG | - | tig0009740:12755-12774 | None:intergenic | 15.0% |
| !!! | CATGAATTTTTAGAAATATT+AGG | - | tig0009740:12759-12778 | None:intergenic | 15.0% |
| !! | TTAAAATTAAGAATCAAGTT+GGG | - | tig0009740:12827-12846 | None:intergenic | 15.0% |
| !! | ATTAAAATTAAGAATCAAGT+TGG | - | tig0009740:12828-12847 | None:intergenic | 15.0% |
| !! | AAAAAATCAATGATTTAACT+TGG | + | tig0009740:13025-13044 | Msa1347430:intron | 15.0% |
| !! | AAAGATATTATTAAGTGTAT+TGG | - | tig0009740:13258-13277 | None:intergenic | 15.0% |
| !! | AATATAGAAACTGTTGATAT+TGG | + | tig0009740:11489-11508 | Msa1347430:intron | 20.0% |
| !!! | TTGTTATACTACGTTTATTT+TGG | + | tig0009740:11592-11611 | Msa1347430:intron | 20.0% |
| !! | ATAAATCATTCAATTTGACA+AGG | - | tig0009740:11684-11703 | None:intergenic | 20.0% |
| !! | GTCAAATTGAATGATTTATT+TGG | + | tig0009740:11685-11704 | Msa1347430:intron | 20.0% |
| !!! | TGCTTATTTAAAGTTTGTTT+TGG | + | tig0009740:11975-11994 | Msa1347430:intron | 20.0% |
| !! | AATATAAGGTAGTACATTTA+TGG | + | tig0009740:12304-12323 | Msa1347430:intron | 20.0% |
| !!! | GGACTAATTTTTTAATTCTT+TGG | + | tig0009740:12453-12472 | Msa1347430:intron | 20.0% |
| !! | TAATCTTAACATATCAATCA+AGG | - | tig0009740:12534-12553 | None:intergenic | 20.0% |
| !!! | ATTTCTAAAAATTCATGTAG+AGG | + | tig0009740:12762-12781 | Msa1347430:intron | 20.0% |
| !!! | TAAAATTAAGAATCAAGTTG+GGG | - | tig0009740:12826-12845 | None:intergenic | 20.0% |
| !!! | TTTTAATTGCACTGTTTATT+AGG | + | tig0009740:12841-12860 | Msa1347430:intron | 20.0% |
| !!! | TAAACCTACTTTTTTTATCT+GGG | + | tig0009740:13083-13102 | Msa1347430:intron | 20.0% |
| !! | TTATGCTCTATTTATTTCAA+TGG | + | tig0009740:13153-13172 | Msa1347430:intron | 20.0% |
| !! | TATGCTCTATTTATTTCAAT+GGG | + | tig0009740:13154-13173 | Msa1347430:intron | 20.0% |
| !!! | TTAATAATATCTTTTGCTCA+TGG | + | tig0009740:13264-13283 | Msa1347430:intron | 20.0% |
| !!! | ATAATTCTAGTTGTTTTATC+TGG | + | tig0009740:13318-13337 | Msa1347430:intron | 20.0% |
| !!! | TAATTCTAGTTGTTTTATCT+GGG | + | tig0009740:13319-13338 | Msa1347430:intron | 20.0% |
| !!! | TGTTTTTTTGCTTGTTATTT+TGG | + | tig0009740:13888-13907 | Msa1347430:three_prime_UTR | 20.0% |
| !!! | AACATAGAATACAAGTTTTT+CGG | - | tig0009740:13974-13993 | None:intergenic | 20.0% |
| !! | CTAAAAATCATAAAACCAAA+TGG | - | tig0009740:14034-14053 | None:intergenic | 20.0% |
| ! | TTATCAGTAGAAATGAACAA+TGG | - | tig0009740:11015-11034 | None:intergenic | 25.0% |
| ! | CTCAAAATTGCAACAAAAAA+AGG | - | tig0009740:11039-11058 | None:intergenic | 25.0% |
| ! | TTTATATGATATCTTCAGGT+TGG | + | tig0009740:11110-11129 | Msa1347430:intron | 25.0% |
| !!! | TTGTTTTGTCTGTTAAAACT+GGG | + | tig0009740:11179-11198 | Msa1347430:intron | 25.0% |
| !!! | AAGATGTGGTGTTTTTTTAA+TGG | + | tig0009740:11245-11264 | Msa1347430:intron | 25.0% |
| ! | TAGATATACAATTGTATCCA+AGG | + | tig0009740:11297-11316 | Msa1347430:intron | 25.0% |
| ! | TATTTATAATTACAGATGGC+TGG | + | tig0009740:11366-11385 | Msa1347430:intron | 25.0% |
| !!! | TAGTTGTAAAGTTTTGGAAA+TGG | - | tig0009740:11416-11435 | None:intergenic | 25.0% |
| !! | ACAGTTTAGTTGTAAAGTTT+TGG | - | tig0009740:11422-11441 | None:intergenic | 25.0% |
| ! | CAGTTATATACATAAAATGC+TGG | - | tig0009740:11871-11890 | None:intergenic | 25.0% |
| !!! | GTTTGTTTTGGATTTGTATT+TGG | + | tig0009740:11987-12006 | Msa1347430:intron | 25.0% |
| ! | TTTCCATTGAAAATTACATG+AGG | + | tig0009740:12090-12109 | Msa1347430:intron | 25.0% |
| ! | TAAAAGCTATGTAAAGAAGT+TGG | + | tig0009740:12204-12223 | Msa1347430:intron | 25.0% |
| ! | ATTATGGTCTGCAATATAAA+AGG | - | tig0009740:12344-12363 | None:intergenic | 25.0% |
| ! | CAACAAAGAAAACGATAATT+GGG | + | tig0009740:12432-12451 | Msa1347430:intron | 25.0% |
| ! | GTGGATCAATATGTAATTAA+AGG | - | tig0009740:12483-12502 | None:intergenic | 25.0% |
| ! | GTAAATTAAGACTAGAGATT+AGG | + | tig0009740:12600-12619 | Msa1347430:intron | 25.0% |
| ! | GAAAGATATTAGTATTACCA+TGG | - | tig0009740:12731-12750 | None:intergenic | 25.0% |
| !! | TATACATTTTCATCACACTA+TGG | - | tig0009740:12993-13012 | None:intergenic | 25.0% |
| !!! | CTAAACCTACTTTTTTTATC+TGG | + | tig0009740:13082-13101 | Msa1347430:intron | 25.0% |
| ! | AATAAATAGAGCATAACCTA+TGG | - | tig0009740:13149-13168 | None:intergenic | 25.0% |
| ! | TACCAAAGTAGATATTTCTT+CGG | + | tig0009740:13515-13534 | Msa1347430:CDS | 25.0% |
| !!! | TGTTTGTTGAGTTGATATTT+TGG | + | tig0009740:13636-13655 | Msa1347430:intron | 25.0% |
| !!! | TTACAATGCTTTTGCTTTTT+AGG | + | tig0009740:13687-13706 | Msa1347430:intron | 25.0% |
| !!! | TTTTGCTTTTTAGGACAAAA+AGG | + | tig0009740:13696-13715 | Msa1347430:intron | 25.0% |
| ! | CAAGAGGACAAAATATATTA+AGG | - | tig0009740:14009-14028 | None:intergenic | 25.0% |
| !!! | TTTGTTGTTTGAAATCAGTA+TGG | - | tig0009740:14074-14093 | None:intergenic | 25.0% |
| !!! | TACTGATTTCAAACAACAAA+AGG | + | tig0009740:14074-14093 | Msa1347430:intron | 25.0% |
| !! | ACTGATTTCAAACAACAAAA+GGG | + | tig0009740:14075-14094 | Msa1347430:intron | 25.0% |
| !! | AAAAGCATTGTCTTCAACTA+GGG | + | tig0009740:10666-10685 | Msa1347430:five_prime_UTR | 30.0% |
| TAACAGATCCAAAATAAACG+TGG | - | tig0009740:11068-11087 | None:intergenic | 30.0% | |
| AATCACAATAACTCCACAAA+GGG | - | tig0009740:11153-11172 | None:intergenic | 30.0% | |
| !!! | CTTGTTTTGTCTGTTAAAAC+TGG | + | tig0009740:11178-11197 | Msa1347430:intron | 30.0% |
| TGATGACTGAGTTAATATAG+TGG | + | tig0009740:11334-11353 | Msa1347430:intron | 30.0% | |
| TAGAAACTGTTGATATTGGT+AGG | + | tig0009740:11493-11512 | Msa1347430:intron | 30.0% | |
| TCAATAGAATTGAAAAACGC+TGG | - | tig0009740:11536-11555 | None:intergenic | 30.0% | |
| ! | ACACCTCATGTAATTTTCAA+TGG | - | tig0009740:12096-12115 | None:intergenic | 30.0% |
| TTAGTGGTTACTTATAGGAA+AGG | - | tig0009740:12132-12151 | None:intergenic | 30.0% | |
| AACTCTTAGTGGTTACTTAT+AGG | - | tig0009740:12137-12156 | None:intergenic | 30.0% | |
| CTAAACATTTCAACTCTTAG+TGG | - | tig0009740:12148-12167 | None:intergenic | 30.0% | |
| !!! | AGGTTGGTTTTTTTCAAAAC+AGG | - | tig0009740:12239-12258 | None:intergenic | 30.0% |
| AACAGGTCAAACAATAACTA+AGG | - | tig0009740:12259-12278 | None:intergenic | 30.0% | |
| TTACATAGCGTTACAAAAAC+AGG | - | tig0009740:12276-12295 | None:intergenic | 30.0% | |
| ! | CTATTTGGTTTCTTGTACTT+TGG | + | tig0009740:12374-12393 | Msa1347430:intron | 30.0% |
| ! | CCAATTATCGTTTTCTTTGT+TGG | - | tig0009740:12434-12453 | None:intergenic | 30.0% |
| CCAACAAAGAAAACGATAAT+TGG | + | tig0009740:12431-12450 | Msa1347430:intron | 30.0% | |
| TATAACTTTACCAACTTCCA+TGG | + | tig0009740:12573-12592 | Msa1347430:intron | 30.0% | |
| AGTATGTTCAAATCTAGAGA+CGG | - | tig0009740:12875-12894 | None:intergenic | 30.0% | |
| AGACATGACAATATCGAATT+TGG | + | tig0009740:12922-12941 | Msa1347430:intron | 30.0% | |
| ATGACAATATCGAATTTGGT+TGG | + | tig0009740:12926-12945 | Msa1347430:intron | 30.0% | |
| ACATCCCAGATAAAAAAAGT+AGG | - | tig0009740:13090-13109 | None:intergenic | 30.0% | |
| GGGATGTGTTTAAATATACT+AGG | + | tig0009740:13103-13122 | Msa1347430:intron | 30.0% | |
| ATTAATCTTGAATGGACCTA+AGG | - | tig0009740:13448-13467 | None:intergenic | 30.0% | |
| TTAGGTCCATTCAAGATTAA+TGG | + | tig0009740:13447-13466 | Msa1347430:intron | 30.0% | |
| AACCGAAGAAATATCTACTT+TGG | - | tig0009740:13520-13539 | None:intergenic | 30.0% | |
| TGATGACAAGTATTTCTCAA+AGG | + | tig0009740:13554-13573 | Msa1347430:CDS | 30.0% | |
| !! | TTTTGGTTGTTTGTCAAACT+AGG | + | tig0009740:13905-13924 | Msa1347430:three_prime_UTR | 30.0% |
| ATAAAACCAAATGGTTCAAG+AGG | - | tig0009740:14025-14044 | None:intergenic | 30.0% | |
| !!! | TGATTTTTAGCCTTTATTGC+TGG | + | tig0009740:14044-14063 | Msa1347430:three_prime_UTR | 30.0% |
| !! | CAAAAGCATTGTCTTCAACT+AGG | + | tig0009740:10665-10684 | Msa1347430:five_prime_UTR | 35.0% |
| ATTGTCTTCAACTAGGGTTT+AGG | + | tig0009740:10672-10691 | Msa1347430:five_prime_UTR | 35.0% | |
| ! | AGTAACTGCCACGTTTATTT+TGG | + | tig0009740:11057-11076 | Msa1347430:intron | 35.0% |
| GAAATTTAATTCCCCCTTTG+TGG | + | tig0009740:11137-11156 | Msa1347430:intron | 35.0% | |
| ATCACAATAACTCCACAAAG+GGG | - | tig0009740:11152-11171 | None:intergenic | 35.0% | |
| GAATCACAATAACTCCACAA+AGG | - | tig0009740:11154-11173 | None:intergenic | 35.0% | |
| ! | TTTTGTCTGTTAAAACTGGG+TGG | + | tig0009740:11182-11201 | Msa1347430:intron | 35.0% |
| GCTGATGTTTGATTAAGATG+TGG | + | tig0009740:11231-11250 | Msa1347430:intron | 35.0% | |
| ATATTAGTTGCTACCAATGC+TGG | - | tig0009740:11474-11493 | None:intergenic | 35.0% | |
| GCAATCAGTCAATAAACAAG+AGG | - | tig0009740:11662-11681 | None:intergenic | 35.0% | |
| !! | TGGTACCTGAATTTGTTTTC+AGG | + | tig0009740:11705-11724 | Msa1347430:intron | 35.0% |
| !! | GGTACCTGAATTTGTTTTCA+GGG | + | tig0009740:11706-11725 | Msa1347430:intron | 35.0% |
| TCTTCTTGCTGGAAGATTTA+AGG | + | tig0009740:11757-11776 | Msa1347430:CDS | 35.0% | |
| CTTCTTGCTGGAAGATTTAA+GGG | + | tig0009740:11758-11777 | Msa1347430:CDS | 35.0% | |
| TGAAAATTACATGAGGTGTG+TGG | + | tig0009740:12097-12116 | Msa1347430:intron | 35.0% | |
| GGTCAAACAATAACTAAGGT+TGG | - | tig0009740:12255-12274 | None:intergenic | 35.0% | |
| AGTCTTAATTTACACCTCCA+TGG | - | tig0009740:12593-12612 | None:intergenic | 35.0% | |
| CCTGTGACAAGCATATTAAT+AGG | - | tig0009740:12649-12668 | None:intergenic | 35.0% | |
| CCTATTAATATGCTTGTCAC+AGG | + | tig0009740:12646-12665 | Msa1347430:intron | 35.0% | |
| GGTCAGAGTAAAAAATTCCA+TGG | + | tig0009740:12711-12730 | Msa1347430:intron | 35.0% | |
| !! | TCAAATCTAGAGACGGATTA+GGG | - | tig0009740:12868-12887 | None:intergenic | 35.0% |
| ! | TTCAAATCTAGAGACGGATT+AGG | - | tig0009740:12869-12888 | None:intergenic | 35.0% |
| CTAGATTTGAACATACTCGA+TGG | + | tig0009740:12878-12897 | Msa1347430:intron | 35.0% | |
| CGATGGTCTATTAGTGAAAT+AGG | + | tig0009740:12895-12914 | Msa1347430:intron | 35.0% | |
| ATTCATCACACTAAGGTAAG+AGG | - | tig0009740:12954-12973 | None:intergenic | 35.0% | |
| CAACTCAATTCATCACACTA+AGG | - | tig0009740:12961-12980 | None:intergenic | 35.0% | |
| TGGAGATGTATAACTAGGTT+TGG | - | tig0009740:13129-13148 | None:intergenic | 35.0% | |
| ACCTAGTTATACATCTCCAT+AGG | + | tig0009740:13130-13149 | Msa1347430:intron | 35.0% | |
| ACCTATGGAGATGTATAACT+AGG | - | tig0009740:13134-13153 | None:intergenic | 35.0% | |
| GTTAACTCAATCATCATCTG+TGG | - | tig0009740:13197-13216 | None:intergenic | 35.0% | |
| GAAGATTTGTCAAAGATGAG+TGG | - | tig0009740:13407-13426 | None:intergenic | 35.0% | |
| TTGTTCACTCTCATTACCTT+AGG | + | tig0009740:13429-13448 | Msa1347430:intron | 35.0% | |
| GTGAATCAGGCTTATGTTAT+CGG | + | tig0009740:13486-13505 | Msa1347430:CDS | 35.0% | |
| ! | TTTTGTCCTCTTGAACCATT+TGG | + | tig0009740:14016-14035 | Msa1347430:three_prime_UTR | 35.0% |
| !!! | TCAGTTTTGCAAAGTACTGA+AGG | - | tig0009740:14115-14134 | None:intergenic | 35.0% |
| ! | ACTAGGGTTTAGGTTTAGAC+AGG | + | tig0009740:10682-10701 | Msa1347430:five_prime_UTR | 40.0% |
| ! | CTAGGGTTTAGGTTTAGACA+GGG | + | tig0009740:10683-10702 | Msa1347430:five_prime_UTR | 40.0% |
| !!! | GTTTTTGGTGCCATTGCTAT+TGG | - | tig0009740:10741-10760 | Msa1347420:intron | 40.0% |
| !!! | ACTCTTGCGGTTCTTGTTTT+TGG | - | tig0009740:10756-10775 | Msa1347420:intron | 40.0% |
| TCTGCTATGTATCACAAACG+TGG | + | tig0009740:10822-10841 | Msa1347430:CDS | 40.0% | |
| TCACAATAACTCCACAAAGG+GGG | - | tig0009740:11151-11170 | None:intergenic | 40.0% | |
| TTTCTTCCTGCATTAGTGCT+GGG | + | tig0009740:11209-11228 | Msa1347430:intron | 40.0% | |
| !! | TGAAGAAAGAGTACCAGCAT+TGG | + | tig0009740:11458-11477 | Msa1347430:intron | 40.0% |
| TATTGGTAGGAACTAAGCTC+AGG | + | tig0009740:11506-11525 | Msa1347430:intron | 40.0% | |
| GAAGCCCTGAAAACAAATTC+AGG | - | tig0009740:11713-11732 | None:intergenic | 40.0% | |
| !! | ACAGTGTTGATTCTTCTTGC+TGG | + | tig0009740:11746-11765 | Msa1347430:CDS | 40.0% |
| TTTCTCAAACAGCTTCCTTC+TGG | + | tig0009740:11794-11813 | Msa1347430:CDS | 40.0% | |
| GTAACAAGAAGAAGTCCAGA+AGG | - | tig0009740:11812-11831 | None:intergenic | 40.0% | |
| TCTGGACTTCTTCTTGTTAC+CGG | + | tig0009740:11812-11831 | Msa1347430:CDS | 40.0% | |
| GCTATGTAAAGAAGTTGGAC+AGG | + | tig0009740:12209-12228 | Msa1347430:intron | 40.0% | |
| GGTAGTACATTTATGGATGC+AGG | + | tig0009740:12311-12330 | Msa1347430:intron | 40.0% | |
| AACTTTACCAACTTCCATGG+AGG | + | tig0009740:12576-12595 | Msa1347430:intron | 40.0% | |
| ATTTACACCTCCATGGAAGT+TGG | - | tig0009740:12586-12605 | None:intergenic | 40.0% | |
| TGTCCGAACTTGAACTTTAC+TGG | + | tig0009740:12623-12642 | Msa1347430:intron | 40.0% | |
| ! | AGGCCAGTAAAGTTCAAGTT+CGG | - | tig0009740:12629-12648 | None:intergenic | 40.0% |
| TTTCCATTGTGTATGTCCAC+TGG | + | tig0009740:13055-13074 | Msa1347430:intron | 40.0% | |
| CTCATGGTTTCCATTGTCTA+TGG | + | tig0009740:13280-13299 | Msa1347430:intron | 40.0% | |
| ATGCAAGTGACCATAGACAA+TGG | - | tig0009740:13293-13312 | None:intergenic | 40.0% | |
| GATTTGTCAAAGATGAGTGG+AGG | - | tig0009740:13404-13423 | None:intergenic | 40.0% | |
| GGGACTCCATTAATCTTGAA+TGG | - | tig0009740:13456-13475 | None:intergenic | 40.0% | |
| ATCCCAGAAAAAGACGAAGA+AGG | + | tig0009740:13578-13597 | Msa1347430:CDS | 40.0% | |
| TCCCAGAAAAAGACGAAGAA+GGG | + | tig0009740:13579-13598 | Msa1347430:CDS | 40.0% | |
| ! | TCCCTTCTTCGTCTTTTTCT+GGG | - | tig0009740:13583-13602 | None:intergenic | 40.0% |
| GATCATCTTTCTTCTCCTGA+GGG | - | tig0009740:13726-13745 | None:intergenic | 40.0% | |
| TGATCATCTTTCTTCTCCTG+AGG | - | tig0009740:13727-13746 | None:intergenic | 40.0% | |
| !!! | CCTAGGTAAGTTTTCAAGTC+TGG | - | tig0009740:13793-13812 | None:intergenic | 40.0% |
| CCAGACTTGAAAACTTACCT+AGG | + | tig0009740:13790-13809 | Msa1347430:CDS | 40.0% | |
| ! | CTTTAGAAGACCAACTCATG+TGG | - | tig0009740:13847-13866 | None:intergenic | 40.0% |
| !! | CACATGAGTTGGTCTTCTAA+AGG | + | tig0009740:13845-13864 | Msa1347430:CDS | 40.0% |
| GTATGGTATGCCAGCAATAA+AGG | - | tig0009740:14057-14076 | None:intergenic | 40.0% | |
| ! | GGTTTAGGTTTAGACAGGGA+GGG | + | tig0009740:10687-10706 | Msa1347430:five_prime_UTR | 45.0% |
| ! | TTGCTATTGGTGTGATGGGA+TGG | - | tig0009740:10728-10747 | Msa1347420:intron | 45.0% |
| TCCCATCACACCAATAGCAA+TGG | + | tig0009740:10728-10747 | Msa1347430:exon | 45.0% | |
| ! | GCCATTGCTATTGGTGTGAT+GGG | - | tig0009740:10732-10751 | Msa1347420:intron | 45.0% |
| ! | TGCCATTGCTATTGGTGTGA+TGG | - | tig0009740:10733-10752 | Msa1347420:intron | 45.0% |
| TGTATCACAAACGTGGTCTC+TGG | + | tig0009740:10829-10848 | Msa1347430:CDS | 45.0% | |
| GTATCACAAACGTGGTCTCT+GGG | + | tig0009740:10830-10849 | Msa1347430:CDS | 45.0% | |
| GTAAAACTTAGGCGGCTTCT+CGG | - | tig0009740:10922-10941 | Msa1347420:CDS | 45.0% | |
| !!! | GTTTTGGCTTGTGCTTGTTG+CGG | - | tig0009740:10971-10990 | Msa1347420:CDS | 45.0% |
| !!! | AACCTGAGCTTAGTGGGTTT+TGG | - | tig0009740:10987-11006 | Msa1347420:CDS | 45.0% |
| TGTCTGTTAAAACTGGGTGG+TGG | + | tig0009740:11185-11204 | Msa1347430:intron | 45.0% | |
| GTCTGTTAAAACTGGGTGGT+GGG | + | tig0009740:11186-11205 | Msa1347430:intron | 45.0% | |
| GTTTCTTCCTGCATTAGTGC+TGG | + | tig0009740:11208-11227 | Msa1347430:intron | 45.0% | |
| TTCAGGGCTTCTATTACTCC+AGG | + | tig0009740:11722-11741 | Msa1347430:intron | 45.0% | |
| TCAGGGCTTCTATTACTCCA+GGG | + | tig0009740:11723-11742 | Msa1347430:intron | 45.0% | |
| AGAAGAATCAACACTGTCCC+TGG | - | tig0009740:11743-11762 | None:intergenic | 45.0% | |
| AGGTGAGCAGAGTTATGTGT+TGG | + | tig0009740:12782-12801 | Msa1347430:intron | 45.0% | |
| GGTGAGCAGAGTTATGTGTT+GGG | + | tig0009740:12783-12802 | Msa1347430:intron | 45.0% | |
| GTGAGCAGAGTTATGTGTTG+GGG | + | tig0009740:12784-12803 | Msa1347430:intron | 45.0% | |
| TGAGCAGAGTTATGTGTTGG+GGG | + | tig0009740:12785-12804 | Msa1347430:intron | 45.0% | |
| ATGCCAGTGGACATACACAA+TGG | - | tig0009740:13061-13080 | None:intergenic | 45.0% | |
| AAGTAGGTTTAGCATGCCAG+TGG | - | tig0009740:13074-13093 | None:intergenic | 45.0% | |
| ! | CTCCCTTCTTCGTCTTTTTC+TGG | - | tig0009740:13584-13603 | None:intergenic | 45.0% |
| !! | CGAGTTCTTTGAGGCAGATA+AGG | + | tig0009740:13608-13627 | Msa1347430:CDS | 45.0% |
| !! | GTTCTTTGAGGCAGATAAGG+AGG | + | tig0009740:13611-13630 | Msa1347430:CDS | 45.0% |
| GATCAAAAGACTGTCGATGC+TGG | + | tig0009740:13742-13761 | Msa1347430:CDS | 45.0% | |
| ! | CAAGTCTGGAACACTGTCAA+TGG | - | tig0009740:13779-13798 | None:intergenic | 45.0% |
| TGAAAACTTACCTAGGTGCC+AGG | + | tig0009740:13797-13816 | Msa1347430:CDS | 45.0% | |
| ! | GGGTTTAGGTTTAGACAGGG+AGG | + | tig0009740:10686-10705 | Msa1347430:five_prime_UTR | 50.0% |
| TTAGGTTTAGACAGGGAGGG+AGG | + | tig0009740:10690-10709 | Msa1347430:five_prime_UTR | 50.0% | |
| CCCTGATCAAGTCAGGGTTA+CGG | - | tig0009740:10782-10801 | Msa1347420:intron | 50.0% | |
| ! | CCGTAACCCTGACTTGATCA+GGG | + | tig0009740:10779-10798 | Msa1347430:CDS | 50.0% |
| ! | CGTAACCCTGACTTGATCAG+GGG | + | tig0009740:10780-10799 | Msa1347430:CDS | 50.0% |
| CGATACCCCTGATCAAGTCA+GGG | - | tig0009740:10788-10807 | Msa1347420:intron | 50.0% | |
| ! | CCTGACTTGATCAGGGGTAT+CGG | + | tig0009740:10786-10805 | Msa1347430:CDS | 50.0% |
| TGGGCAATCAAGGCTAAGCA+CGG | + | tig0009740:10849-10868 | Msa1347430:CDS | 50.0% | |
| AGCCAAAACCCACTAAGCTC+AGG | + | tig0009740:10982-11001 | Msa1347430:CDS | 50.0% | |
| GTGACGAACCTGAGCTTAGT+GGG | - | tig0009740:10993-11012 | Msa1347420:CDS | 50.0% | |
| TCAACAAGCTGAACGAGCCT+TGG | - | tig0009740:11317-11336 | None:intergenic | 50.0% | |
| CCTGATTCACACGTCTCAAG+GGG | - | tig0009740:13476-13495 | None:intergenic | 50.0% | |
| GCCTGATTCACACGTCTCAA+GGG | - | tig0009740:13477-13496 | None:intergenic | 50.0% | |
| AGCCTGATTCACACGTCTCA+AGG | - | tig0009740:13478-13497 | None:intergenic | 50.0% | |
| TCAAGGAAAACCTGGCACCT+AGG | - | tig0009740:13810-13829 | None:intergenic | 50.0% | |
| ! | AGGTGCCAGGTTTTCCTTGA+AGG | + | tig0009740:13810-13829 | Msa1347430:CDS | 50.0% |
| ACCTGCCTTCAAGGAAAACC+TGG | - | tig0009740:13818-13837 | None:intergenic | 50.0% | |
| AGGTGTGAAGCCACATGAGT+TGG | + | tig0009740:13834-13853 | Msa1347430:CDS | 50.0% | |
| AGGGTTACGGCTCACTCTTG+CGG | - | tig0009740:10769-10788 | Msa1347420:intron | 55.0% | |
| ! | GCCGTAACCCTGACTTGATC+AGG | + | tig0009740:10778-10797 | Msa1347430:CDS | 55.0% |
| CCGATACCCCTGATCAAGTC+AGG | - | tig0009740:10789-10808 | Msa1347420:intron | 55.0% | |
| ACGTGGTCTCTGGGCAATCA+AGG | + | tig0009740:10839-10858 | Msa1347430:CDS | 55.0% | |
| GCAATCAAGGCTAAGCACGG+TGG | + | tig0009740:10852-10871 | Msa1347430:CDS | 55.0% | |
| TCGGCGGGGTAAAACTTAGG+CGG | - | tig0009740:10930-10949 | Msa1347420:CDS | 55.0% | |
| TCGTCGGCGGGGTAAAACTT+AGG | - | tig0009740:10933-10952 | Msa1347420:CDS | 55.0% | |
| GAGTGGCTTCTTCACGTCGT+CGG | - | tig0009740:10949-10968 | Msa1347420:CDS | 55.0% | |
| GGTGACGAACCTGAGCTTAG+TGG | - | tig0009740:10994-11013 | Msa1347420:CDS | 55.0% | |
| CATCAGCCCAGCACTAATGC+AGG | - | tig0009740:11218-11237 | None:intergenic | 55.0% | |
| CCCCTTGAGACGTGTGAATC+AGG | + | tig0009740:13473-13492 | Msa1347430:CDS | 55.0% | |
| GGGAGAGAGCGAGTTCTTTG+AGG | + | tig0009740:13599-13618 | Msa1347430:CDS | 55.0% | |
| !! | GGACAAAAAGGTGCTCCCTC+AGG | + | tig0009740:13708-13727 | Msa1347430:intron | 55.0% |
| ! | GCCAGGTTTTCCTTGAAGGC+AGG | + | tig0009740:13814-13833 | Msa1347430:CDS | 55.0% |
| TGGCTTCACACCTGCCTTCA+AGG | - | tig0009740:13827-13846 | None:intergenic | 55.0% | |
| AACTTAGGCGGCTTCTCGGC+CGG | - | tig0009740:10918-10937 | Msa1347420:CDS | 60.0% | |
| TGGCTTCTTCACGTCGTCGG+CGG | - | tig0009740:10946-10965 | Msa1347420:CDS | 60.0% | |
| ! | GGCTTGTGCTTGTTGCGGAG+TGG | - | tig0009740:10966-10985 | Msa1347420:CDS | 60.0% |
| TAGCGACGGGATCGTGGCGA+GGG | - | tig0009740:10884-10903 | Msa1347420:CDS | 65.0% | |
| TTAGCGACGGGATCGTGGCG+AGG | - | tig0009740:10885-10904 | Msa1347420:CDS | 65.0% | |
| CAGGCTTAGCGACGGGATCG+TGG | - | tig0009740:10890-10909 | Msa1347420:CDS | 65.0% | |
| GGAGCTGCAGGCTTAGCGAC+GGG | - | tig0009740:10897-10916 | Msa1347420:CDS | 65.0% | |
| CGGAGCTGCAGGCTTAGCGA+CGG | - | tig0009740:10898-10917 | Msa1347420:CDS | 65.0% | |
| CGTCGCTAAGCCTGCAGCTC+CGG | + | tig0009740:10896-10915 | Msa1347430:CDS | 65.0% | |
| GCTTCTTCACGTCGTCGGCG+GGG | - | tig0009740:10944-10963 | Msa1347420:CDS | 65.0% | |
| GGCTTCTTCACGTCGTCGGC+GGG | - | tig0009740:10945-10964 | Msa1347420:CDS | 65.0% | |
| GGCTTCTCGGCCGGAGCTGC+AGG | - | tig0009740:10909-10928 | Msa1347420:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0009740 | gene | 10648 | 14184 | 10648 | ID=Msa1347430;Name=Msa1347430 |
| tig0009740 | mRNA | 10648 | 14184 | 10648 | ID=Msa1347430-mRNA-1;Parent=Msa1347430;Name=Msa1347430-mRNA-1;_AED=0.05;_eAED=0.05;_QI=99|1|1|1|0.75|0.6|5|290|233 |
| tig0009740 | exon | 10648 | 11003 | 10648 | ID=Msa1347430-mRNA-1:exon:5882;Parent=Msa1347430-mRNA-1 |
| tig0009740 | exon | 11727 | 11833 | 11727 | ID=Msa1347430-mRNA-1:exon:5883;Parent=Msa1347430-mRNA-1 |
| tig0009740 | exon | 13451 | 13632 | 13451 | ID=Msa1347430-mRNA-1:exon:5884;Parent=Msa1347430-mRNA-1 |
| tig0009740 | exon | 13709 | 14065 | 13709 | ID=Msa1347430-mRNA-1:exon:5885;Parent=Msa1347430-mRNA-1 |
| tig0009740 | exon | 14096 | 14184 | 14096 | ID=Msa1347430-mRNA-1:exon:5886;Parent=Msa1347430-mRNA-1 |
| tig0009740 | five_prime_UTR | 10648 | 10746 | 10648 | ID=Msa1347430-mRNA-1:five_prime_utr;Parent=Msa1347430-mRNA-1 |
| tig0009740 | CDS | 10747 | 11003 | 10747 | ID=Msa1347430-mRNA-1:cds;Parent=Msa1347430-mRNA-1 |
| tig0009740 | CDS | 11727 | 11833 | 11727 | ID=Msa1347430-mRNA-1:cds;Parent=Msa1347430-mRNA-1 |
| tig0009740 | CDS | 13451 | 13632 | 13451 | ID=Msa1347430-mRNA-1:cds;Parent=Msa1347430-mRNA-1 |
| tig0009740 | CDS | 13709 | 13864 | 13709 | ID=Msa1347430-mRNA-1:cds;Parent=Msa1347430-mRNA-1 |
| tig0009740 | three_prime_UTR | 13865 | 14065 | 13865 | ID=Msa1347430-mRNA-1:three_prime_utr;Parent=Msa1347430-mRNA-1 |
| tig0009740 | three_prime_UTR | 14096 | 14184 | 14096 | ID=Msa1347430-mRNA-1:three_prime_utr;Parent=Msa1347430-mRNA-1 |
| Gene Sequence |
| Protein sequence |
