Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0315430 | XP_003593950.2 | 99.338 | 151 | 1 | 0 | 1 | 151 | 1 | 151 | 9.63e-104 | 303 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0315430 | sp|O22584|RS14_LUPLU | 95.652 | 138 | 6 | 0 | 3 | 140 | 2 | 139 | 1.57e-92 | 267 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001760 | Msa0315430 | 0.893519 | 5.827679e-75 | -8.615850e-47 |
| Msa0003330 | Msa0315430 | 0.883957 | 2.888023e-71 | -8.615850e-47 |
| Msa0016350 | Msa0315430 | 0.836715 | 7.952339e-57 | -8.615850e-47 |
| Msa0027590 | Msa0315430 | 0.899159 | 2.610997e-77 | -8.615850e-47 |
| Msa0040220 | Msa0315430 | 0.879042 | 1.720893e-69 | -8.615850e-47 |
| Msa0042510 | Msa0315430 | 0.812477 | 4.157264e-51 | -8.615850e-47 |
| Msa0072570 | Msa0315430 | 0.873625 | 1.272083e-67 | -8.615850e-47 |
| Msa0075350 | Msa0315430 | 0.856281 | 3.577497e-62 | -8.615850e-47 |
| Msa0079560 | Msa0315430 | 0.817894 | 2.602466e-52 | -8.615850e-47 |
| Msa0086160 | Msa0315430 | 0.832385 | 9.742088e-56 | -8.615850e-47 |
| Msa0087910 | Msa0315430 | 0.908873 | 1.061185e-81 | -8.615850e-47 |
| Msa0114570 | Msa0315430 | 0.815740 | 7.917570e-52 | -8.615850e-47 |
| Msa0114600 | Msa0315430 | 0.879855 | 8.857941e-70 | -8.615850e-47 |
| Msa0123290 | Msa0315430 | 0.810668 | 1.027851e-50 | -8.615850e-47 |
| Msa0127230 | Msa0315430 | 0.803517 | 3.356728e-49 | -8.615850e-47 |
| Msa0128330 | Msa0315430 | 0.931793 | 2.231937e-94 | -8.615850e-47 |
| Msa0128750 | Msa0315430 | 0.824260 | 8.886131e-54 | -8.615850e-47 |
| Msa0132460 | Msa0315430 | 0.880906 | 3.731351e-70 | -8.615850e-47 |
| Msa0134580 | Msa0315430 | 0.889906 | 1.591856e-73 | -8.615850e-47 |
| Msa0144810 | Msa0315430 | 0.815812 | 7.630905e-52 | -8.615850e-47 |
| Msa0146610 | Msa0315430 | 0.834206 | 3.426407e-56 | -8.615850e-47 |
| Msa0167860 | Msa0315430 | 0.937128 | 5.727064e-98 | -8.615850e-47 |
| Msa0168320 | Msa0315430 | 0.822765 | 1.987837e-53 | -8.615850e-47 |
| Msa0174580 | Msa0315430 | 0.930353 | 1.852573e-93 | -8.615850e-47 |
| Msa0182050 | Msa0315430 | 0.882828 | 7.509257e-71 | -8.615850e-47 |
| Msa0182100 | Msa0315430 | 0.879310 | 1.383202e-69 | -8.615850e-47 |
| Msa0183840 | Msa0315430 | 0.804824 | 1.794070e-49 | -8.615850e-47 |
| Msa0187810 | Msa0315430 | 0.842492 | 2.501466e-58 | -8.615850e-47 |
| Msa0188740 | Msa0315430 | 0.806585 | 7.658192e-50 | -8.615850e-47 |
| Msa0191450 | Msa0315430 | 0.881685 | 1.953861e-70 | -8.615850e-47 |
| Msa0191550 | Msa0315430 | 0.890857 | 6.742402e-74 | -8.615850e-47 |
| Msa0192300 | Msa0315430 | 0.895531 | 8.776725e-76 | -8.615850e-47 |
| Msa0192490 | Msa0315430 | 0.804774 | 1.838071e-49 | -8.615850e-47 |
| Msa0192750 | Msa0315430 | 0.804530 | 2.067066e-49 | -8.615850e-47 |
| Msa0194940 | Msa0315430 | 0.942299 | 9.185918e-102 | -8.615850e-47 |
| Msa0195030 | Msa0315430 | 0.815225 | 1.030927e-51 | -8.615850e-47 |
| Msa0210330 | Msa0315430 | 0.830089 | 3.572729e-55 | -8.615850e-47 |
| Msa0222730 | Msa0315430 | 0.806869 | 6.672183e-50 | -8.615850e-47 |
| Msa0225350 | Msa0315430 | 0.827686 | 1.363966e-54 | -8.615850e-47 |
| Msa0233550 | Msa0315430 | 0.825029 | 5.857692e-54 | -8.615850e-47 |
| Msa0234850 | Msa0315430 | 0.823715 | 1.193024e-53 | -8.615850e-47 |
| Msa0235050 | Msa0315430 | 0.863023 | 3.346523e-64 | -8.615850e-47 |
| Msa0237180 | Msa0315430 | 0.812413 | 4.293806e-51 | -8.615850e-47 |
| Msa0239420 | Msa0315430 | 0.840511 | 8.320216e-58 | -8.615850e-47 |
| Msa0264640 | Msa0315430 | 0.821240 | 4.484824e-53 | -8.615850e-47 |
| Msa0270160 | Msa0315430 | 0.830388 | 3.021112e-55 | -8.615850e-47 |
| Msa0277600 | Msa0315430 | 0.902401 | 1.006866e-78 | -8.615850e-47 |
| Msa0281330 | Msa0315430 | 0.854151 | 1.489670e-61 | -8.615850e-47 |
| Msa0281370 | Msa0315430 | 0.886611 | 2.941611e-72 | -8.615850e-47 |
| Msa0294670 | Msa0315430 | 0.809207 | 2.120415e-50 | -8.615850e-47 |
| Msa0301220 | Msa0315430 | 0.821352 | 4.225619e-53 | -8.615850e-47 |
| Msa0301250 | Msa0315430 | 0.897461 | 1.374599e-76 | -8.615850e-47 |
| Msa0312210 | Msa0315430 | 0.832209 | 1.077208e-55 | -8.615850e-47 |
| Msa0313060 | Msa0315430 | 0.915115 | 8.631556e-85 | -8.615850e-47 |
| Msa0313520 | Msa0315430 | 0.849183 | 3.809067e-60 | -8.615850e-47 |
| Msa0315430 | Msa0315660 | 0.812046 | 5.162024e-51 | -8.615850e-47 |
| Msa0315430 | Msa0340560 | 0.821547 | 3.809819e-53 | -8.615850e-47 |
| Msa0315430 | Msa0369410 | 0.858902 | 5.988701e-63 | -8.615850e-47 |
| Msa0315430 | Msa0371490 | 0.849339 | 3.446246e-60 | -8.615850e-47 |
| Msa0315430 | Msa0376850 | 0.816831 | 4.515186e-52 | -8.615850e-47 |
| Msa0315430 | Msa0377370 | 0.840694 | 7.452828e-58 | -8.615850e-47 |
| Msa0315430 | Msa0377520 | 0.891450 | 3.929266e-74 | -8.615850e-47 |
| Msa0315430 | Msa0382960 | 0.829357 | 5.384804e-55 | -8.615850e-47 |
| Msa0315430 | Msa0419710 | 0.853691 | 2.020772e-61 | -8.615850e-47 |
| Msa0315430 | Msa0426090 | 0.890561 | 8.816802e-74 | -8.615850e-47 |
| Msa0315430 | Msa0426250 | 0.909866 | 3.545404e-82 | -8.615850e-47 |
| Msa0315430 | Msa0432750 | 0.840771 | 7.115221e-58 | -8.615850e-47 |
| Msa0315430 | Msa0436750 | 0.807500 | 4.904859e-50 | -8.615850e-47 |
| Msa0315430 | Msa0438960 | 0.833554 | 4.990351e-56 | -8.615850e-47 |
| Msa0315430 | Msa0450150 | 0.876174 | 1.722010e-68 | -8.615850e-47 |
| Msa0315430 | Msa0463520 | 0.811360 | 7.280071e-51 | -8.615850e-47 |
| Msa0315430 | Msa0471880 | 0.824808 | 6.602968e-54 | -8.615850e-47 |
| Msa0315430 | Msa0472480 | 0.880978 | 3.516215e-70 | -8.615850e-47 |
| Msa0315430 | Msa0473390 | 0.823622 | 1.254497e-53 | -8.615850e-47 |
| Msa0315430 | Msa0475810 | 0.849214 | 3.733000e-60 | -8.615850e-47 |
| Msa0315430 | Msa0479980 | 0.839117 | 1.919513e-57 | -8.615850e-47 |
| Msa0315430 | Msa0481520 | 0.908519 | 1.564082e-81 | -8.615850e-47 |
| Msa0315430 | Msa0481800 | 0.827118 | 1.866358e-54 | -8.615850e-47 |
| Msa0315430 | Msa0482560 | 0.844754 | 6.213934e-59 | -8.615850e-47 |
| Msa0315430 | Msa0484730 | 0.818370 | 2.030987e-52 | -8.615850e-47 |
| Msa0315430 | Msa0511760 | 0.870333 | 1.580099e-66 | -8.615850e-47 |
| Msa0315430 | Msa0516830 | 0.817680 | 2.908767e-52 | -8.615850e-47 |
| Msa0315430 | Msa0517480 | 0.873755 | 1.150206e-67 | -8.615850e-47 |
| Msa0315430 | Msa0529900 | 0.887863 | 9.816580e-73 | -8.615850e-47 |
| Msa0315430 | Msa0540480 | 0.804792 | 1.822551e-49 | -8.615850e-47 |
| Msa0315430 | Msa0547920 | 0.901335 | 2.972104e-78 | -8.615850e-47 |
| Msa0315430 | Msa0550420 | 0.845287 | 4.461776e-59 | -8.615850e-47 |
| Msa0315430 | Msa0573550 | 0.929525 | 6.137298e-93 | -8.615850e-47 |
| Msa0315430 | Msa0574780 | 0.871013 | 9.443246e-67 | -8.615850e-47 |
| Msa0315430 | Msa0578010 | 0.810473 | 1.132689e-50 | -8.615850e-47 |
| Msa0315430 | Msa0579830 | 0.892072 | 2.222740e-74 | -8.615850e-47 |
| Msa0315430 | Msa0582070 | 0.809627 | 1.723529e-50 | -8.615850e-47 |
| Msa0315430 | Msa0585570 | 0.821990 | 3.009880e-53 | -8.615850e-47 |
| Msa0315430 | Msa0597240 | 0.893081 | 8.759207e-75 | -8.615850e-47 |
| Msa0315430 | Msa0602900 | 0.886811 | 2.470145e-72 | -8.615850e-47 |
| Msa0315430 | Msa0605890 | 0.893966 | 3.838558e-75 | -8.615850e-47 |
| Msa0315430 | Msa0609120 | 0.817710 | 2.863457e-52 | -8.615850e-47 |
| Msa0315430 | Msa0619230 | 0.897548 | 1.263453e-76 | -8.615850e-47 |
| Msa0315430 | Msa0622230 | 0.849324 | 3.479809e-60 | -8.615850e-47 |
| Msa0315430 | Msa0643960 | 0.888849 | 4.097329e-73 | -8.615850e-47 |
| Msa0315430 | Msa0649890 | 0.899060 | 2.880287e-77 | -8.615850e-47 |
| Msa0315430 | Msa0653060 | 0.843389 | 1.443999e-58 | -8.615850e-47 |
| Msa0315430 | Msa0656450 | 0.825267 | 5.146013e-54 | -8.615850e-47 |
| Msa0315430 | Msa0663400 | 0.834308 | 3.230390e-56 | -8.615850e-47 |
| Msa0315430 | Msa0681220 | 0.819555 | 1.092220e-52 | -8.615850e-47 |
| Msa0315430 | Msa0686550 | 0.886173 | 4.306529e-72 | -8.615850e-47 |
| Msa0315430 | Msa0694400 | 0.939239 | 1.775602e-99 | -8.615850e-47 |
| Msa0315430 | Msa0704860 | 0.867258 | 1.562199e-65 | -8.615850e-47 |
| Msa0315430 | Msa0705800 | 0.836588 | 8.569983e-57 | -8.615850e-47 |
| Msa0315430 | Msa0708630 | 0.880814 | 4.025984e-70 | -8.615850e-47 |
| Msa0315430 | Msa0718560 | 0.803066 | 4.161779e-49 | -8.615850e-47 |
| Msa0315430 | Msa0741510 | 0.828849 | 7.153485e-55 | -8.615850e-47 |
| Msa0315430 | Msa0748350 | 0.873852 | 1.066707e-67 | -8.615850e-47 |
| Msa0315430 | Msa0749000 | 0.844879 | 5.751037e-59 | -8.615850e-47 |
| Msa0315430 | Msa0758420 | 0.836412 | 9.503195e-57 | -8.615850e-47 |
| Msa0315430 | Msa0788380 | 0.878447 | 2.787260e-69 | -8.615850e-47 |
| Msa0315430 | Msa0790450 | 0.852922 | 3.358804e-61 | -8.615850e-47 |
| Msa0315430 | Msa0796490 | 0.854002 | 1.644190e-61 | -8.615850e-47 |
| Msa0315430 | Msa0822580 | 0.813953 | 1.971451e-51 | -8.615850e-47 |
| Msa0315430 | Msa0834220 | 0.818462 | 1.935868e-52 | -8.615850e-47 |
| Msa0315430 | Msa0838070 | 0.864629 | 1.060082e-64 | -8.615850e-47 |
| Msa0315430 | Msa0861320 | 0.825245 | 5.206362e-54 | -8.615850e-47 |
| Msa0315430 | Msa0902220 | 0.810939 | 8.981337e-51 | -8.615850e-47 |
| Msa0315430 | Msa0902730 | 0.834656 | 2.642099e-56 | -8.615850e-47 |
| Msa0315430 | Msa0915540 | 0.800469 | 1.420217e-48 | -8.615850e-47 |
| Msa0315430 | Msa0927910 | 0.817691 | 2.891693e-52 | -8.615850e-47 |
| Msa0315430 | Msa0929680 | 0.840499 | 8.382250e-58 | -8.615850e-47 |
| Msa0315430 | Msa0929700 | 0.932600 | 6.674254e-95 | -8.615850e-47 |
| Msa0315430 | Msa0930100 | 0.857531 | 1.531480e-62 | -8.615850e-47 |
| Msa0315430 | Msa0930790 | 0.840913 | 6.529278e-58 | -8.615850e-47 |
| Msa0315430 | Msa0930890 | 0.889969 | 1.504187e-73 | -8.615850e-47 |
| Msa0315430 | Msa0978470 | 0.859482 | 4.010992e-63 | -8.615850e-47 |
| Msa0315430 | Msa1025200 | 0.812007 | 5.263967e-51 | -8.615850e-47 |
| Msa0315430 | Msa1025220 | 0.811869 | 5.641100e-51 | -8.615850e-47 |
| Msa0315430 | Msa1037290 | 0.841169 | 5.594009e-58 | -8.615850e-47 |
| Msa0315430 | Msa1040160 | 0.846685 | 1.859549e-59 | -8.615850e-47 |
| Msa0315430 | Msa1041680 | 0.834380 | 3.099139e-56 | -8.615850e-47 |
| Msa0315430 | Msa1047020 | 0.830971 | 2.174427e-55 | -8.615850e-47 |
| Msa0315430 | Msa1050100 | 0.835757 | 1.393648e-56 | -8.615850e-47 |
| Msa0315430 | Msa1054280 | 0.835624 | 1.505291e-56 | -8.615850e-47 |
| Msa0315430 | Msa1068660 | 0.831898 | 1.285828e-55 | -8.615850e-47 |
| Msa0315430 | Msa1079910 | 0.805683 | 1.185637e-49 | -8.615850e-47 |
| Msa0315430 | Msa1080390 | 0.819720 | 1.001403e-52 | -8.615850e-47 |
| Msa0315430 | Msa1082050 | 0.837426 | 5.236264e-57 | -8.615850e-47 |
| Msa0315430 | Msa1082170 | 0.843414 | 1.421812e-58 | -8.615850e-47 |
| Msa0315430 | Msa1083370 | 0.851997 | 6.160489e-61 | -8.615850e-47 |
| Msa0315430 | Msa1085850 | 0.808020 | 3.802653e-50 | -8.615850e-47 |
| Msa0315430 | Msa1093500 | 0.832607 | 8.584372e-56 | -8.615850e-47 |
| Msa0315430 | Msa1096900 | 0.816493 | 5.374445e-52 | -8.615850e-47 |
| Msa0315430 | Msa1116940 | 0.828628 | 8.086464e-55 | -8.615850e-47 |
| Msa0315430 | Msa1124850 | 0.851855 | 6.761000e-61 | -8.615850e-47 |
| Msa0315430 | Msa1125900 | 0.834423 | 3.023373e-56 | -8.615850e-47 |
| Msa0315430 | Msa1126100 | 0.824549 | 7.601026e-54 | -8.615850e-47 |
| Msa0315430 | Msa1126520 | 0.837748 | 4.328438e-57 | -8.615850e-47 |
| Msa0315430 | Msa1126690 | 0.892684 | 1.264706e-74 | -8.615850e-47 |
| Msa0315430 | Msa1147670 | 0.828827 | 7.239342e-55 | -8.615850e-47 |
| Msa0315430 | Msa1156830 | 0.817623 | 2.995642e-52 | -8.615850e-47 |
| Msa0315430 | Msa1164150 | 0.872234 | 3.718164e-67 | -8.615850e-47 |
| Msa0315430 | Msa1165640 | 0.851117 | 1.093503e-60 | -8.615850e-47 |
| Msa0315430 | Msa1166570 | 0.836179 | 1.089197e-56 | -8.615850e-47 |
| Msa0315430 | Msa1167540 | 0.826985 | 2.008779e-54 | -8.615850e-47 |
| Msa0315430 | Msa1180000 | 0.890392 | 1.027044e-73 | -8.615850e-47 |
| Msa0315430 | Msa1186030 | 0.857076 | 2.088542e-62 | -8.615850e-47 |
| Msa0315430 | Msa1203560 | 0.834446 | 2.983083e-56 | -8.615850e-47 |
| Msa0315430 | Msa1206240 | 0.842439 | 2.583594e-58 | -8.615850e-47 |
| Msa0315430 | Msa1208330 | 0.862958 | 3.502935e-64 | -8.615850e-47 |
| Msa0315430 | Msa1219760 | 0.818662 | 1.743663e-52 | -8.615850e-47 |
| Msa0315430 | Msa1235950 | 0.859652 | 3.565544e-63 | -8.615850e-47 |
| Msa0315430 | Msa1235980 | 0.868937 | 4.502678e-66 | -8.615850e-47 |
| Msa0315430 | Msa1237040 | 0.875169 | 3.809299e-68 | -8.615850e-47 |
| Msa0315430 | Msa1240270 | 0.829549 | 4.837891e-55 | -8.615850e-47 |
| Msa0315430 | Msa1255830 | 0.839744 | 1.318967e-57 | -8.615850e-47 |
| Msa0315430 | Msa1255850 | 0.856376 | 3.355450e-62 | -8.615850e-47 |
| Msa0315430 | Msa1258540 | 0.892332 | 1.750912e-74 | -8.615850e-47 |
| Msa0315430 | Msa1269250 | -0.806377 | 8.471483e-50 | -8.615850e-47 |
| Msa0315430 | Msa1270640 | 0.884722 | 1.504239e-71 | -8.615850e-47 |
| Msa0315430 | Msa1270710 | 0.879449 | 1.235390e-69 | -8.615850e-47 |
| Msa0315430 | Msa1278130 | 0.848201 | 7.125274e-60 | -8.615850e-47 |
| Msa0315430 | Msa1284060 | 0.857592 | 1.469641e-62 | -8.615850e-47 |
| Msa0315430 | Msa1295150 | 0.820938 | 5.264738e-53 | -8.615850e-47 |
| Msa0315430 | Msa1296090 | 0.846460 | 2.142022e-59 | -8.615850e-47 |
| Msa0315430 | Msa1311400 | 0.877724 | 4.993250e-69 | -8.615850e-47 |
| Msa0315430 | Msa1316100 | 0.807330 | 5.329498e-50 | -8.615850e-47 |
| Msa0315430 | Msa1317390 | 0.855102 | 7.901614e-62 | -8.615850e-47 |
| Msa0315430 | Msa1330730 | 0.846209 | 2.507681e-59 | -8.615850e-47 |
| Msa0315430 | Msa1333370 | 0.843142 | 1.680374e-58 | -8.615850e-47 |
| Msa0315430 | Msa1341780 | 0.862440 | 5.062031e-64 | -8.615850e-47 |
| Msa0315430 | Msa1344160 | 0.801336 | 9.448642e-49 | -8.615850e-47 |
| Msa0315430 | Msa1344190 | 0.801227 | 9.943526e-49 | -8.615850e-47 |
| Msa0315430 | Msa1347430 | 0.813367 | 2.652702e-51 | -8.615850e-47 |
| Msa0315430 | Msa1351020 | 0.893531 | 5.766451e-75 | -8.615850e-47 |
| Msa0315430 | Msa1351910 | 0.833274 | 5.858225e-56 | -8.615850e-47 |
| Msa0315430 | Msa1353300 | 0.822539 | 2.244493e-53 | -8.615850e-47 |
| Msa0315430 | Msa1363910 | 0.803413 | 3.528445e-49 | -8.615850e-47 |
| Msa0315430 | Msa1367540 | 0.835161 | 1.971244e-56 | -8.615850e-47 |
| Msa0315430 | Msa1368920 | 0.842849 | 2.011527e-58 | -8.615850e-47 |
| Msa0315430 | Msa1371410 | 0.844135 | 9.120360e-59 | -8.615850e-47 |
| Msa0315430 | Msa1374480 | 0.822254 | 2.613525e-53 | -8.615850e-47 |
| Msa0315430 | Msa1385480 | 0.931201 | 5.358286e-94 | -8.615850e-47 |
| Msa0315430 | Msa1390760 | 0.896813 | 2.573007e-76 | -8.615850e-47 |
| Msa0315430 | Msa1397100 | 0.814894 | 1.221107e-51 | -8.615850e-47 |
| Msa0315430 | Msa1397660 | 0.827311 | 1.678218e-54 | -8.615850e-47 |
| Msa0315430 | Msa1403910 | 0.813327 | 2.707338e-51 | -8.615850e-47 |
| Msa0315430 | Msa1407550 | 0.869019 | 4.235802e-66 | -8.615850e-47 |
| Msa0315430 | Msa1413570 | 0.829999 | 3.759946e-55 | -8.615850e-47 |
| Msa0315430 | Msa1415620 | 0.843648 | 1.230965e-58 | -8.615850e-47 |
| Msa0315430 | Msa1424570 | 0.866474 | 2.777883e-65 | -8.615850e-47 |
| Msa0315430 | Msa1432310 | 0.892776 | 1.161652e-74 | -8.615850e-47 |
| Msa0315430 | Msa1441220 | -0.806555 | 7.771508e-50 | -8.615850e-47 |
| Msa0315430 | Msa1446410 | 0.923749 | 1.761758e-89 | -8.615850e-47 |
| Msa0315430 | Msa1449160 | 0.812010 | 5.257518e-51 | -8.615850e-47 |
| Msa0315430 | Msa1450560 | 0.858025 | 1.093161e-62 | -8.615850e-47 |
| Msa0315430 | Msa1463570 | 0.933117 | 3.059393e-95 | -8.615850e-47 |
| Msa0315430 | Msa1465700 | 0.870926 | 1.008692e-66 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0315430 | MtrunA17_Chr2g0286111 | 99.338 | 151 | 1 | 0 | 1 | 151 | 1 | 151 | 8.86e-108 | 303 |
| Msa0315430 | MtrunA17_Chr4g0052211 | 99.338 | 151 | 1 | 0 | 1 | 151 | 1 | 151 | 4.50e-107 | 301 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0315430 | AT3G11510.1 | 89.855 | 138 | 14 | 0 | 3 | 140 | 2 | 139 | 9.24e-90 | 258 |
| Msa0315430 | AT3G52580.1 | 89.130 | 138 | 15 | 0 | 3 | 140 | 2 | 139 | 2.86e-89 | 256 |
| Msa0315430 | AT2G36160.1 | 88.406 | 138 | 16 | 0 | 3 | 140 | 2 | 139 | 1.71e-88 | 254 |
| Msa0315430 | ATCG00750.1 | 33.613 | 119 | 70 | 2 | 29 | 147 | 28 | 137 | 7.66e-12 | 59.7 |
Find 72 sgRNAs with CRISPR-Local
Find 185 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCGAGATTTGAAGAAATT+AGG | 0.223530 | 2_4:+11822311 | None:intergenic |
| CTTCGTGCCCTTGCTCGTTC+TGG | 0.240493 | 2_4:-11820757 | Msa0315430:CDS |
| AGCACCAGGGCCAGGTGTTT+TGG | 0.248968 | 2_4:+11820789 | None:intergenic |
| ATTTGAAGAAATTAGGGTTT+TGG | 0.284679 | 2_4:+11822318 | None:intergenic |
| GCTCGTTCTGGAATGAAAAT+TGG | 0.299156 | 2_4:-11820745 | Msa0315430:CDS |
| ACAAGAAATACTTTATGTTT+AGG | 0.301414 | 2_4:+11819550 | None:intergenic |
| TGTGTTCAGCTTCGTGCTTT+TGG | 0.324037 | 2_4:-11819417 | Msa0315430:three_prime_UTR |
| AATGTTACTGTCTCTTCCTT+TGG | 0.327634 | 2_4:+11822157 | None:intergenic |
| CAAAATGCCACAATTCTGTT+TGG | 0.341435 | 2_4:+11819605 | None:intergenic |
| TCCGAGATTTGAAGAAATTA+GGG | 0.346871 | 2_4:+11822312 | None:intergenic |
| CCCTTCTACCACTCTTTCTA+CGG | 0.354483 | 2_4:+11819689 | None:intergenic |
| AGAGAAATGGTGGCAGTGTT+TGG | 0.379820 | 2_4:+11822372 | None:intergenic |
| AGAAGGCTTTAGATACCTTA+TGG | 0.383435 | 2_4:-11819664 | Msa0315430:exon |
| AGAGTGGTAGAAGGGGTAGA+AGG | 0.383998 | 2_4:-11819681 | Msa0315430:CDS |
| AACATTGGGTCCAGCTGTTA+AGG | 0.388167 | 2_4:-11822140 | Msa0315430:CDS |
| AGTAAACAATAAAGCTAATT+CGG | 0.392151 | 2_4:+11819477 | None:intergenic |
| CGAAGAGCAGCTTGAGCACC+AGG | 0.399712 | 2_4:+11820775 | None:intergenic |
| AGTCGTCAAAGAGAAAGGTT+AGG | 0.404664 | 2_4:-11822183 | Msa0315430:CDS |
| TTGGATACTGATGCTGCTGC+TGG | 0.405674 | 2_4:+11822337 | None:intergenic |
| TTTAGATACCTTATGGTGTA+TGG | 0.408955 | 2_4:-11819657 | Msa0315430:exon |
| TTCAGTGTTTGTCTGAGAAC+TGG | 0.418927 | 2_4:-11819455 | Msa0315430:three_prime_UTR |
| TGCCGCTATGCTTGCAGCAC+AGG | 0.424923 | 2_4:-11821119 | Msa0315430:CDS |
| TTTAGGTGGGATGAAAGTTA+AGG | 0.429174 | 2_4:-11821167 | Msa0315430:intron |
| GGAATGAAAATTGGTCGTAT+AGG | 0.435498 | 2_4:-11820736 | Msa0315430:intron |
| GCAGCTTGAGCACCAGGGCC+AGG | 0.435589 | 2_4:+11820781 | None:intergenic |
| CAGCATGTTACTGATTTATC+CGG | 0.442376 | 2_4:-11821969 | Msa0315430:CDS |
| ACCCTAATTTCTTCAAATCT+CGG | 0.444756 | 2_4:-11822313 | Msa0315430:five_prime_UTR |
| TGCTGCAAGCATAGCGGCAT+AGG | 0.460137 | 2_4:+11821123 | None:intergenic |
| GTGATAGTCGTCAAAGAGAA+AGG | 0.460831 | 2_4:-11822188 | Msa0315430:intron |
| CACATTAAGCTCCGTGCCAC+TGG | 0.465038 | 2_4:-11820823 | Msa0315430:CDS |
| GAACCTTGTCAAAAGAGAAA+TGG | 0.470046 | 2_4:+11822359 | None:intergenic |
| CCCGTAGAAAGAGTGGTAGA+AGG | 0.472164 | 2_4:-11819690 | Msa0315430:CDS |
| GAAACCCTTGTCCGTATCAC+TGG | 0.485388 | 2_4:-11821942 | Msa0315430:intron |
| ACCTTATGGTGTATGGAAGC+TGG | 0.488683 | 2_4:-11819650 | Msa0315430:three_prime_UTR |
| TTTGGTCTTGTTTCCACCAG+TGG | 0.501009 | 2_4:+11820807 | None:intergenic |
| TCCAGCTTCCATACACCATA+AGG | 0.503287 | 2_4:+11819649 | None:intergenic |
| ACGGGTGCTATCGGAAGGAA+TGG | 0.504362 | 2_4:+11819708 | None:intergenic |
| TGCCACAATTCTGTTTGGCA+TGG | 0.511987 | 2_4:+11819610 | None:intergenic |
| ACGGACAAGGGTTTCCCTGC+CGG | 0.518910 | 2_4:+11821950 | None:intergenic |
| TGTTCACCATCCTTAACAGC+TGG | 0.531081 | 2_4:+11822130 | None:intergenic |
| ACTCTTTCTACGGGTGCTAT+CGG | 0.532615 | 2_4:+11819699 | None:intergenic |
| CCGTAGAAAGAGTGGTAGAA+GGG | 0.533450 | 2_4:-11819689 | Msa0315430:CDS |
| AAAGGAAGAGACAGTAACAT+TGG | 0.536923 | 2_4:-11822155 | Msa0315430:CDS |
| CCTTCTACCACTCTTTCTAC+GGG | 0.539502 | 2_4:+11819690 | None:intergenic |
| ATGTTACTGATTTATCCGGC+AGG | 0.543996 | 2_4:-11821965 | Msa0315430:CDS |
| GTCGTCAAAGAGAAAGGTTA+GGG | 0.549356 | 2_4:-11822182 | Msa0315430:CDS |
| AAGACCAAAACACCTGGCCC+TGG | 0.552706 | 2_4:-11820793 | Msa0315430:CDS |
| AAGGAAGAGACAGTAACATT+GGG | 0.554128 | 2_4:-11822154 | Msa0315430:CDS |
| TCTTGTTTCCACCAGTGGCA+CGG | 0.555351 | 2_4:+11820812 | None:intergenic |
| GAGAAAGGTTAGGGAGCCAA+AGG | 0.560093 | 2_4:-11822173 | Msa0315430:CDS |
| ATTAAGCTCCGTGCCACTGG+TGG | 0.571382 | 2_4:-11820820 | Msa0315430:CDS |
| GCTGCAAGCATAGCGGCATA+GGG | 0.578463 | 2_4:+11821124 | None:intergenic |
| ACTCATACATACCAGTGATA+CGG | 0.579497 | 2_4:+11821931 | None:intergenic |
| TTTCATTCCAGAACGAGCAA+GGG | 0.582609 | 2_4:+11820750 | None:intergenic |
| TTCCATGCCAAACAGAATTG+TGG | 0.582827 | 2_4:-11819612 | Msa0315430:three_prime_UTR |
| GAGTCATATACTAACAATGA+AGG | 0.583006 | 2_4:+11822066 | None:intergenic |
| CGGGTGCTATCGGAAGGAAT+GGG | 0.585535 | 2_4:+11819709 | None:intergenic |
| GGAAACAAGACCAAAACACC+TGG | 0.596535 | 2_4:-11820799 | Msa0315430:CDS |
| TTTCTACGGGTGCTATCGGA+AGG | 0.607952 | 2_4:+11819703 | None:intergenic |
| ACATACCAGTGATACGGACA+AGG | 0.611084 | 2_4:+11821937 | None:intergenic |
| AGATACCATGGTTGAAAATG+CGG | 0.612440 | 2_4:+11822288 | None:intergenic |
| CCTTGTCAAAAGAGAAATGG+TGG | 0.615510 | 2_4:+11822362 | None:intergenic |
| TGTTACTGATTTATCCGGCA+GGG | 0.618792 | 2_4:-11821964 | Msa0315430:CDS |
| TTGGGTCCAGCTGTTAAGGA+TGG | 0.623308 | 2_4:-11822136 | Msa0315430:CDS |
| CGTAGAAAGAGTGGTAGAAG+GGG | 0.630512 | 2_4:-11819688 | Msa0315430:CDS |
| GATAGCACCCGTAGAAAGAG+TGG | 0.631829 | 2_4:-11819697 | Msa0315430:CDS |
| GGATGTTGCTACTAGATGCA+AGG | 0.645225 | 2_4:-11821098 | Msa0315430:intron |
| TTTAGGTGTTGAATCAAACA+TGG | 0.646359 | 2_4:+11819567 | None:intergenic |
| CATACCAGTGATACGGACAA+GGG | 0.691082 | 2_4:+11821938 | None:intergenic |
| ACGGAGCTTAATGTGAAGTG+CGG | 0.698863 | 2_4:+11820831 | None:intergenic |
| ATCCTGTGCTGCAAGCATAG+CGG | 0.706099 | 2_4:+11821117 | None:intergenic |
| GAAGAGCAGCTTGAGCACCA+GGG | 0.706692 | 2_4:+11820776 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTTAAAAAATTACATATTTA+AGG | - | chr2_4:11819890-11819909 | Msa0315430:intron | 10.0% |
| !!! | TTTTAAAAACCTTAAAAATT+TGG | - | chr2_4:11819921-11819940 | Msa0315430:intron | 10.0% |
| !!! | TTATAAGTTTTTAATTTAGA+TGG | - | chr2_4:11820412-11820431 | Msa0315430:intron | 10.0% |
| !!! | TAGCATTATTTTTTTTATAT+GGG | - | chr2_4:11820810-11820829 | Msa0315430:CDS | 10.0% |
| !!! | TTAGTTACTATCATATTTTA+AGG | - | chr2_4:11819858-11819877 | Msa0315430:intron | 15.0% |
| !!! | TACAAATAACCAAATTTTTA+AGG | + | chr2_4:11819933-11819952 | None:intergenic | 15.0% |
| !! | ATTTGATAAGTTAATTTAGA+TGG | - | chr2_4:11820356-11820375 | Msa0315430:intron | 15.0% |
| !!! | TTTGTTTTTTTCCAAATTTT+AGG | - | chr2_4:11820537-11820556 | Msa0315430:intron | 15.0% |
| !!! | GTAGCATTATTTTTTTTATA+TGG | - | chr2_4:11820809-11820828 | Msa0315430:CDS | 15.0% |
| !!! | AGCATTATTTTTTTTATATG+GGG | - | chr2_4:11820811-11820830 | Msa0315430:CDS | 15.0% |
| !!! | GAATTTTTTTTAAAATACCC+TGG | + | chr2_4:11820105-11820124 | None:intergenic | 20.0% |
| !! | ATTGAAAAATAATTATTCCC+GGG | + | chr2_4:11820251-11820270 | None:intergenic | 20.0% |
| !! | GATTGAAAAATAATTATTCC+CGG | + | chr2_4:11820252-11820271 | None:intergenic | 20.0% |
| !! | TTTCAATCTTGTAACAAATA+TGG | - | chr2_4:11820264-11820283 | Msa0315430:intron | 20.0% |
| !! | TTCAATCTTGTAACAAATAT+GGG | - | chr2_4:11820265-11820284 | Msa0315430:intron | 20.0% |
| !!! | TTTTTTTCCAAATTTTAGGT+GGG | - | chr2_4:11820541-11820560 | Msa0315430:intron | 20.0% |
| !!! | TGAATGTTTTTGTTTTGTTT+TGG | - | chr2_4:11820772-11820791 | Msa0315430:CDS | 20.0% |
| !!! | TGTACTGATTCAAAATATTT+TGG | - | chr2_4:11820849-11820868 | Msa0315430:intron | 20.0% |
| !! | GATAATTGTATTTAATCTGA+TGG | + | chr2_4:11821143-11821162 | None:intergenic | 20.0% |
| !!! | TTCAAGTTATTTGAGTTATT+TGG | - | chr2_4:11821216-11821235 | Msa0315430:intron | 20.0% |
| !! | TATTGTATAGAATAACTGTA+AGG | - | chr2_4:11821271-11821290 | Msa0315430:intron | 20.0% |
| !! | AATATTCACTATAGTACATA+TGG | - | chr2_4:11821354-11821373 | Msa0315430:intron | 20.0% |
| !!! | TGCTCTTATTTTAAGTTATT+TGG | - | chr2_4:11821385-11821404 | Msa0315430:intron | 20.0% |
| !! | TAATAGTTAAAAGAGAATCA+GGG | - | chr2_4:11821482-11821501 | Msa0315430:intron | 20.0% |
| !! | ACAAGAAATACTTTATGTTT+AGG | + | chr2_4:11822174-11822193 | None:intergenic | 20.0% |
| !! | AGTAAACAATAAAGCTAATT+CGG | + | chr2_4:11822247-11822266 | None:intergenic | 20.0% |
| !! | ATTTGAAGAAATTAGGGTTT+TGG | + | chr2_4:11819406-11819425 | None:intergenic | 25.0% |
| ! | TAACTCTCTATAATTGTTCT+TGG | + | chr2_4:11819961-11819980 | None:intergenic | 25.0% |
| !! | TGTTAGGATTTTTATCTTAG+TGG | - | chr2_4:11820009-11820028 | Msa0315430:intron | 25.0% |
| !! | AAATAAATTCCAGTTTTCCT+AGG | + | chr2_4:11820149-11820168 | None:intergenic | 25.0% |
| ! | ACAAAATTTAATGGGAATGT+TGG | - | chr2_4:11820186-11820205 | Msa0315430:intron | 25.0% |
| ! | CAAAATTTAATGGGAATGTT+GGG | - | chr2_4:11820187-11820206 | Msa0315430:intron | 25.0% |
| ! | GTATACTCTGTAACAAATAT+GGG | - | chr2_4:11820287-11820306 | Msa0315430:intron | 25.0% |
| !!! | GAATTGCATGTTTTAATTAC+TGG | - | chr2_4:11820491-11820510 | Msa0315430:intron | 25.0% |
| !!! | GTTTTTTTCCAAATTTTAGG+TGG | - | chr2_4:11820540-11820559 | Msa0315430:intron | 25.0% |
| ! | ATATTTACGATGTGAAAGTT+AGG | - | chr2_4:11821079-11821098 | Msa0315430:intron | 25.0% |
| ! | GCGTATTGTAAAGAATTATT+TGG | - | chr2_4:11821242-11821261 | Msa0315430:intron | 25.0% |
| ! | TTTCTCTTAACTATAACTAC+TGG | + | chr2_4:11821324-11821343 | None:intergenic | 25.0% |
| ! | AGTTATAGTTAAGAGAAACA+TGG | - | chr2_4:11821326-11821345 | Msa0315430:intron | 25.0% |
| ! | GTAATAGTTAAAAGAGAATC+AGG | - | chr2_4:11821481-11821500 | Msa0315430:intron | 25.0% |
| ! | AATTGAAAAAATTCCTAGTC+TGG | + | chr2_4:11821791-11821810 | None:intergenic | 25.0% |
| ! | GAATAATTAATTTCACTGAG+AGG | + | chr2_4:11821859-11821878 | None:intergenic | 25.0% |
| ACCCTAATTTCTTCAAATCT+CGG | - | chr2_4:11819408-11819427 | Msa0315430:three_prime_UTR | 30.0% | |
| TCCGAGATTTGAAGAAATTA+GGG | + | chr2_4:11819412-11819431 | None:intergenic | 30.0% | |
| TTCCGAGATTTGAAGAAATT+AGG | + | chr2_4:11819413-11819432 | None:intergenic | 30.0% | |
| GAGTCATATACTAACAATGA+AGG | + | chr2_4:11819658-11819677 | None:intergenic | 30.0% | |
| AGCATGATTATTCTATACTC+TGG | - | chr2_4:11819982-11820001 | Msa0315430:intron | 30.0% | |
| ! | AACTGACTCAAATTATTCCT+AGG | - | chr2_4:11820041-11820060 | Msa0315430:intron | 30.0% |
| TTCTAGTGTATATTGTTCCT+AGG | + | chr2_4:11820061-11820080 | None:intergenic | 30.0% | |
| ! | TTGAATTTTCCTAGGAAAAC+TGG | - | chr2_4:11820137-11820156 | Msa0315430:intron | 30.0% |
| ATAATTATTCCCGGGTATAA+AGG | + | chr2_4:11820243-11820262 | None:intergenic | 30.0% | |
| GGTATACTCTGTAACAAATA+TGG | - | chr2_4:11820286-11820305 | Msa0315430:intron | 30.0% | |
| ! | GTTTTTGTCAAAACACTCTT+AGG | + | chr2_4:11820324-11820343 | None:intergenic | 30.0% |
| ! | ATGTTGCTGTTGATATTGTT+TGG | - | chr2_4:11820464-11820483 | Msa0315430:intron | 30.0% |
| !!! | CATGTTTTAATTACTGGATG+TGG | - | chr2_4:11820497-11820516 | Msa0315430:intron | 30.0% |
| ACTGTGTTTACACTGTTTAA+TGG | - | chr2_4:11820730-11820749 | Msa0315430:intron | 30.0% | |
| !!! | GATTCAAAATATTTTGGAGC+AGG | - | chr2_4:11820855-11820874 | Msa0315430:intron | 30.0% |
| AACCTTAAACTATCTTCTGT+GGG | + | chr2_4:11821046-11821065 | None:intergenic | 30.0% | |
| AAACCTTAAACTATCTTCTG+TGG | + | chr2_4:11821047-11821066 | None:intergenic | 30.0% | |
| ATCTGTACTGTATTGAACAA+CGG | - | chr2_4:11821409-11821428 | Msa0315430:intron | 30.0% | |
| ATTTCATGCTAACAGTTACA+TGG | + | chr2_4:11821892-11821911 | None:intergenic | 30.0% | |
| !! | TTTTTATGTTGCTATTGCAG+AGG | - | chr2_4:11821981-11822000 | Msa0315430:intron | 30.0% |
| TTTAGATACCTTATGGTGTA+TGG | - | chr2_4:11822064-11822083 | Msa0315430:intron | 30.0% | |
| !! | TTTAGGTGTTGAATCAAACA+TGG | + | chr2_4:11822157-11822176 | None:intergenic | 30.0% |
| TGAACACAAGTCTAAAAATC+TGG | + | chr2_4:11822292-11822311 | None:intergenic | 30.0% | |
| GAACCTTGTCAAAAGAGAAA+TGG | + | chr2_4:11819365-11819384 | None:intergenic | 35.0% | |
| AGATACCATGGTTGAAAATG+CGG | + | chr2_4:11819436-11819455 | None:intergenic | 35.0% | |
| ATGTACGTATGAAGATACCA+TGG | + | chr2_4:11819448-11819467 | None:intergenic | 35.0% | |
| AATGTTACTGTCTCTTCCTT+TGG | + | chr2_4:11819567-11819586 | None:intergenic | 35.0% | |
| AAAGGAAGAGACAGTAACAT+TGG | - | chr2_4:11819566-11819585 | Msa0315430:three_prime_UTR | 35.0% | |
| AAGGAAGAGACAGTAACATT+GGG | - | chr2_4:11819567-11819586 | Msa0315430:three_prime_UTR | 35.0% | |
| ! | AAGGATGGTGAACATGTTTT+CGG | - | chr2_4:11819600-11819619 | Msa0315430:three_prime_UTR | 35.0% |
| !! | CAGCATGTTACTGATTTATC+CGG | - | chr2_4:11819752-11819771 | Msa0315430:intron | 35.0% |
| ACTCATACATACCAGTGATA+CGG | + | chr2_4:11819793-11819812 | None:intergenic | 35.0% | |
| ! | TCTATACTCTGGTTTGTGTT+AGG | - | chr2_4:11819993-11820012 | Msa0315430:intron | 35.0% |
| AAAGACAGTAGTTTGAATCC+AGG | - | chr2_4:11820084-11820103 | Msa0315430:intron | 35.0% | |
| AAGACAGTAGTTTGAATCCA+GGG | - | chr2_4:11820085-11820104 | Msa0315430:intron | 35.0% | |
| TTCACAAGAACCTTTATACC+CGG | - | chr2_4:11820230-11820249 | Msa0315430:intron | 35.0% | |
| CAGCAACATGAATGTATCTT+AGG | + | chr2_4:11820453-11820472 | None:intergenic | 35.0% | |
| GCTGTTGATATTGTTTGGTT+TGG | - | chr2_4:11820469-11820488 | Msa0315430:intron | 35.0% | |
| CTTTCATCCCACCTAAAATT+TGG | + | chr2_4:11820551-11820570 | None:intergenic | 35.0% | |
| TTTAGGTGGGATGAAAGTTA+AGG | - | chr2_4:11820554-11820573 | Msa0315430:intron | 35.0% | |
| ! | TGCAAACCAAAATGCGTTTT+TGG | - | chr2_4:11820696-11820715 | Msa0315430:intron | 35.0% |
| ! | GCAAACCAAAATGCGTTTTT+GGG | - | chr2_4:11820697-11820716 | Msa0315430:intron | 35.0% |
| ! | TTTCACCCAAAAACGCATTT+TGG | + | chr2_4:11820705-11820724 | None:intergenic | 35.0% |
| GGAATGAAAATTGGTCGTAT+AGG | - | chr2_4:11820985-11821004 | Msa0315430:intron | 35.0% | |
| AACCCACAGAAGATAGTTTA+AGG | - | chr2_4:11821041-11821060 | Msa0315430:intron | 35.0% | |
| ! | CTCTATTTTACCAGAAGAGA+GGG | - | chr2_4:11821182-11821201 | Msa0315430:intron | 35.0% |
| TAAGTATATTCCCTCTCTTC+TGG | + | chr2_4:11821195-11821214 | None:intergenic | 35.0% | |
| ! | TCAACGGTGAACCTTATTTA+CGG | + | chr2_4:11821443-11821462 | None:intergenic | 35.0% |
| TATCGTACTCAGTTCATCAA+CGG | + | chr2_4:11821459-11821478 | None:intergenic | 35.0% | |
| TTGATGAACTGAGTACGATA+TGG | - | chr2_4:11821459-11821478 | Msa0315430:intron | 35.0% | |
| AAAGAGAATCAGGGATATCT+AGG | - | chr2_4:11821491-11821510 | Msa0315430:intron | 35.0% | |
| CTAGGAAAATATGTTGCACA+AGG | - | chr2_4:11821509-11821528 | Msa0315430:intron | 35.0% | |
| ACCAGAAAATCCAATGTCTT+GGG | + | chr2_4:11821598-11821617 | None:intergenic | 35.0% | |
| ! | TCAACCACATGAGTTCTTTT+TGG | + | chr2_4:11821665-11821684 | None:intergenic | 35.0% |
| !! | TTTCGTGGATTAGACTGAAA+CGG | + | chr2_4:11821754-11821773 | None:intergenic | 35.0% |
| TTTCAGTCTAATCCACGAAA+GGG | - | chr2_4:11821754-11821773 | Msa0315430:intron | 35.0% | |
| ATTTCACTGAGAGGAAGATA+AGG | + | chr2_4:11821850-11821869 | None:intergenic | 35.0% | |
| !! | AGAAGGCTTTAGATACCTTA+TGG | - | chr2_4:11822057-11822076 | Msa0315430:intron | 35.0% |
| CAAAATGCCACAATTCTGTT+TGG | + | chr2_4:11822119-11822138 | None:intergenic | 35.0% | |
| CCTTGTCAAAAGAGAAATGG+TGG | + | chr2_4:11819362-11819381 | None:intergenic | 40.0% | |
| ! | CCACCATTTCTCTTTTGACA+AGG | - | chr2_4:11819359-11819378 | Msa0315430:three_prime_UTR | 40.0% |
| GTGATAGTCGTCAAAGAGAA+AGG | - | chr2_4:11819533-11819552 | Msa0315430:three_prime_UTR | 40.0% | |
| AGTCGTCAAAGAGAAAGGTT+AGG | - | chr2_4:11819538-11819557 | Msa0315430:three_prime_UTR | 40.0% | |
| GTCGTCAAAGAGAAAGGTTA+GGG | - | chr2_4:11819539-11819558 | Msa0315430:three_prime_UTR | 40.0% | |
| !! | ATGTTACTGATTTATCCGGC+AGG | - | chr2_4:11819756-11819775 | Msa0315430:intron | 40.0% |
| !! | TGTTACTGATTTATCCGGCA+GGG | - | chr2_4:11819757-11819776 | Msa0315430:intron | 40.0% |
| CCTAGGAAAATTCAAGAGTG+TGG | + | chr2_4:11820132-11820151 | None:intergenic | 40.0% | |
| ! | CCACACTCTTGAATTTTCCT+AGG | - | chr2_4:11820129-11820148 | Msa0315430:intron | 40.0% |
| TCACAAGAACCTTTATACCC+GGG | - | chr2_4:11820231-11820250 | Msa0315430:intron | 40.0% | |
| !!! | AATATTTTGGAGCAGGAGCT+CGG | - | chr2_4:11820862-11820881 | Msa0315430:intron | 40.0% |
| TTTCATTCCAGAACGAGCAA+GGG | + | chr2_4:11820974-11820993 | None:intergenic | 40.0% | |
| ! | TTTTCATTCCAGAACGAGCA+AGG | + | chr2_4:11820975-11820994 | None:intergenic | 40.0% |
| !! | GCTCGTTCTGGAATGAAAAT+TGG | - | chr2_4:11820976-11820995 | Msa0315430:intron | 40.0% |
| CATCGTAAATATCAGAGAGC+AGG | + | chr2_4:11821071-11821090 | None:intergenic | 40.0% | |
| CCTCTCTTCTGGTAAAATAG+AGG | + | chr2_4:11821184-11821203 | None:intergenic | 40.0% | |
| ! | CCTCTATTTTACCAGAAGAG+AGG | - | chr2_4:11821181-11821200 | Msa0315430:intron | 40.0% |
| GGATAGACACTTCATCTCTA+TGG | + | chr2_4:11821570-11821589 | None:intergenic | 40.0% | |
| ! | TCCCAAGACATTGGATTTTC+TGG | - | chr2_4:11821594-11821613 | Msa0315430:intron | 40.0% |
| CACCAGAAAATCCAATGTCT+TGG | + | chr2_4:11821599-11821618 | None:intergenic | 40.0% | |
| ! | CAAGACATTGGATTTTCTGG+TGG | - | chr2_4:11821597-11821616 | Msa0315430:intron | 40.0% |
| ! | CACATGAGTTCTTTTTGGAC+TGG | + | chr2_4:11821660-11821679 | None:intergenic | 40.0% |
| CAGTCCAAAAAGAACTCATG+TGG | - | chr2_4:11821658-11821677 | Msa0315430:intron | 40.0% | |
| GGAATTAGCAAGCAAACACA+GGG | + | chr2_4:11821723-11821742 | None:intergenic | 40.0% | |
| AGGAATTAGCAAGCAAACAC+AGG | + | chr2_4:11821724-11821743 | None:intergenic | 40.0% | |
| TAGACTGAAACGGTGATTAC+AGG | + | chr2_4:11821744-11821763 | None:intergenic | 40.0% | |
| GTTTCAGTCTAATCCACGAA+AGG | - | chr2_4:11821753-11821772 | Msa0315430:intron | 40.0% | |
| GCTAACAGTTACATGGAAAC+TGG | + | chr2_4:11821885-11821904 | None:intergenic | 40.0% | |
| TTCCATGCCAAACAGAATTG+TGG | - | chr2_4:11822109-11822128 | Msa0315430:CDS | 40.0% | |
| TTCAGTGTTTGTCTGAGAAC+TGG | - | chr2_4:11822266-11822285 | Msa0315430:intron | 40.0% | |
| AACATTGGGTCCAGCTGTTA+AGG | - | chr2_4:11819581-11819600 | Msa0315430:three_prime_UTR | 45.0% | |
| TGTTCACCATCCTTAACAGC+TGG | + | chr2_4:11819594-11819613 | None:intergenic | 45.0% | |
| CATACCAGTGATACGGACAA+GGG | + | chr2_4:11819786-11819805 | None:intergenic | 45.0% | |
| ACATACCAGTGATACGGACA+AGG | + | chr2_4:11819787-11819806 | None:intergenic | 45.0% | |
| GGATGTTGCTACTAGATGCA+AGG | - | chr2_4:11820623-11820642 | Msa0315430:intron | 45.0% | |
| GTTGCTACTAGATGCAAGGT+CGG | - | chr2_4:11820627-11820646 | Msa0315430:intron | 45.0% | |
| ACGGAGCTTAATGTGAAGTG+CGG | + | chr2_4:11820893-11820912 | None:intergenic | 45.0% | |
| !! | TTTGGTCTTGTTTCCACCAG+TGG | + | chr2_4:11820917-11820936 | None:intergenic | 45.0% |
| GGAAACAAGACCAAAACACC+TGG | - | chr2_4:11820922-11820941 | Msa0315430:intron | 45.0% | |
| CGGTCGAATTGCCGTAAATA+AGG | - | chr2_4:11821429-11821448 | Msa0315430:intron | 45.0% | |
| TATCCTCAGTCCCAAGACAT+TGG | - | chr2_4:11821585-11821604 | Msa0315430:intron | 45.0% | |
| AATCCAATGTCTTGGGACTG+AGG | + | chr2_4:11821591-11821610 | None:intergenic | 45.0% | |
| !! | GACATTGGATTTTCTGGTGG+TGG | - | chr2_4:11821600-11821619 | Msa0315430:intron | 45.0% |
| GAAATGTGACAACCCTTTCG+TGG | + | chr2_4:11821769-11821788 | None:intergenic | 45.0% | |
| GGTTGTCACATTTCCAGACT+AGG | - | chr2_4:11821775-11821794 | Msa0315430:intron | 45.0% | |
| CTGAGAGGAAGATAAGGTCA+GGG | + | chr2_4:11821844-11821863 | None:intergenic | 45.0% | |
| ACTGAGAGGAAGATAAGGTC+AGG | + | chr2_4:11821845-11821864 | None:intergenic | 45.0% | |
| ! | ACTCTTTCTACGGGTGCTAT+CGG | + | chr2_4:11822025-11822044 | None:intergenic | 45.0% |
| CCTTCTACCACTCTTTCTAC+GGG | + | chr2_4:11822034-11822053 | None:intergenic | 45.0% | |
| CCCTTCTACCACTCTTTCTA+CGG | + | chr2_4:11822035-11822054 | None:intergenic | 45.0% | |
| CCGTAGAAAGAGTGGTAGAA+GGG | - | chr2_4:11822032-11822051 | Msa0315430:intron | 45.0% | |
| CGTAGAAAGAGTGGTAGAAG+GGG | - | chr2_4:11822033-11822052 | Msa0315430:intron | 45.0% | |
| ACCTTATGGTGTATGGAAGC+TGG | - | chr2_4:11822071-11822090 | Msa0315430:intron | 45.0% | |
| TCCAGCTTCCATACACCATA+AGG | + | chr2_4:11822075-11822094 | None:intergenic | 45.0% | |
| TGCCACAATTCTGTTTGGCA+TGG | + | chr2_4:11822114-11822133 | None:intergenic | 45.0% | |
| ! | TGTGTTCAGCTTCGTGCTTT+TGG | - | chr2_4:11822304-11822323 | Msa0315430:five_prime_UTR | 45.0% |
| !! | TAAAATTATACAAAATTTAA+TGG | - | chr2_4:11820177-11820196 | Msa0315430:intron | 5.0% |
| !! | AAAATTATACAAAATTTAAT+GGG | - | chr2_4:11820178-11820197 | Msa0315430:intron | 5.0% |
| TTGGATACTGATGCTGCTGC+TGG | + | chr2_4:11819387-11819406 | None:intergenic | 50.0% | |
| ! | CGGAACCGCATTTTCAACCA+TGG | - | chr2_4:11819428-11819447 | Msa0315430:three_prime_UTR | 50.0% |
| GAGAAAGGTTAGGGAGCCAA+AGG | - | chr2_4:11819548-11819567 | Msa0315430:three_prime_UTR | 50.0% | |
| TTGGGTCCAGCTGTTAAGGA+TGG | - | chr2_4:11819585-11819604 | Msa0315430:three_prime_UTR | 50.0% | |
| GAAACCCTTGTCCGTATCAC+TGG | - | chr2_4:11819779-11819798 | Msa0315430:intron | 50.0% | |
| ATCCTGTGCTGCAAGCATAG+CGG | + | chr2_4:11820607-11820626 | None:intergenic | 50.0% | |
| ! | TCTTGTTTCCACCAGTGGCA+CGG | + | chr2_4:11820912-11820931 | None:intergenic | 50.0% |
| !! | TTTCTGGTGGTGGTTGCTGT+AGG | - | chr2_4:11821610-11821629 | Msa0315430:intron | 50.0% |
| ! | TTTCTACGGGTGCTATCGGA+AGG | + | chr2_4:11822021-11822040 | None:intergenic | 50.0% |
| GATAGCACCCGTAGAAAGAG+TGG | - | chr2_4:11822024-11822043 | Msa0315430:intron | 50.0% | |
| CCCGTAGAAAGAGTGGTAGA+AGG | - | chr2_4:11822031-11822050 | Msa0315430:intron | 50.0% | |
| AGAGTGGTAGAAGGGGTAGA+AGG | - | chr2_4:11822040-11822059 | Msa0315430:intron | 50.0% | |
| GCTGCAAGCATAGCGGCATA+GGG | + | chr2_4:11820600-11820619 | None:intergenic | 55.0% | |
| TGCTGCAAGCATAGCGGCAT+AGG | + | chr2_4:11820601-11820620 | None:intergenic | 55.0% | |
| CACATTAAGCTCCGTGCCAC+TGG | - | chr2_4:11820898-11820917 | Msa0315430:intron | 55.0% | |
| ! | ATTAAGCTCCGTGCCACTGG+TGG | - | chr2_4:11820901-11820920 | Msa0315430:intron | 55.0% |
| AAGACCAAAACACCTGGCCC+TGG | - | chr2_4:11820928-11820947 | Msa0315430:intron | 55.0% | |
| GAAGAGCAGCTTGAGCACCA+GGG | + | chr2_4:11820948-11820967 | None:intergenic | 55.0% | |
| ! | CGGGTGCTATCGGAAGGAAT+GGG | + | chr2_4:11822015-11822034 | None:intergenic | 55.0% |
| ! | ACGGGTGCTATCGGAAGGAA+TGG | + | chr2_4:11822016-11822035 | None:intergenic | 55.0% |
| ACGGACAAGGGTTTCCCTGC+CGG | + | chr2_4:11819774-11819793 | None:intergenic | 60.0% | |
| TGCCGCTATGCTTGCAGCAC+AGG | - | chr2_4:11820602-11820621 | Msa0315430:intron | 60.0% | |
| ! | AGCACCAGGGCCAGGTGTTT+TGG | + | chr2_4:11820935-11820954 | None:intergenic | 60.0% |
| CGAAGAGCAGCTTGAGCACC+AGG | + | chr2_4:11820949-11820968 | None:intergenic | 60.0% | |
| CTTCGTGCCCTTGCTCGTTC+TGG | - | chr2_4:11820964-11820983 | Msa0315430:intron | 60.0% | |
| GCAGCTTGAGCACCAGGGCC+AGG | + | chr2_4:11820943-11820962 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 11819351 | 11822392 | 11819351 | ID=Msa0315430;Name=Msa0315430 |
| chr2_4 | mRNA | 11819351 | 11822392 | 11819351 | ID=Msa0315430-mRNA-1;Parent=Msa0315430;Name=Msa0315430-mRNA-1;_AED=0.01;_eAED=0.01;_QI=96|1|1|1|1|1|6|324|151 |
| chr2_4 | exon | 11819351 | 11819742 | 11819351 | ID=Msa0315430-mRNA-1:exon:4539;Parent=Msa0315430-mRNA-1 |
| chr2_4 | exon | 11820737 | 11820866 | 11820737 | ID=Msa0315430-mRNA-1:exon:4538;Parent=Msa0315430-mRNA-1 |
| chr2_4 | exon | 11821099 | 11821184 | 11821099 | ID=Msa0315430-mRNA-1:exon:4537;Parent=Msa0315430-mRNA-1 |
| chr2_4 | exon | 11821943 | 11821988 | 11821943 | ID=Msa0315430-mRNA-1:exon:4536;Parent=Msa0315430-mRNA-1 |
| chr2_4 | exon | 11822081 | 11822203 | 11822081 | ID=Msa0315430-mRNA-1:exon:4535;Parent=Msa0315430-mRNA-1 |
| chr2_4 | exon | 11822294 | 11822392 | 11822294 | ID=Msa0315430-mRNA-1:exon:4534;Parent=Msa0315430-mRNA-1 |
| chr2_4 | five_prime_UTR | 11822297 | 11822392 | 11822297 | ID=Msa0315430-mRNA-1:five_prime_utr;Parent=Msa0315430-mRNA-1 |
| chr2_4 | CDS | 11822294 | 11822296 | 11822294 | ID=Msa0315430-mRNA-1:cds;Parent=Msa0315430-mRNA-1 |
| chr2_4 | CDS | 11822081 | 11822203 | 11822081 | ID=Msa0315430-mRNA-1:cds;Parent=Msa0315430-mRNA-1 |
| chr2_4 | CDS | 11821943 | 11821988 | 11821943 | ID=Msa0315430-mRNA-1:cds;Parent=Msa0315430-mRNA-1 |
| chr2_4 | CDS | 11821099 | 11821184 | 11821099 | ID=Msa0315430-mRNA-1:cds;Parent=Msa0315430-mRNA-1 |
| chr2_4 | CDS | 11820737 | 11820866 | 11820737 | ID=Msa0315430-mRNA-1:cds;Parent=Msa0315430-mRNA-1 |
| chr2_4 | CDS | 11819675 | 11819742 | 11819675 | ID=Msa0315430-mRNA-1:cds;Parent=Msa0315430-mRNA-1 |
| chr2_4 | three_prime_UTR | 11819351 | 11819674 | 11819351 | ID=Msa0315430-mRNA-1:three_prime_utr;Parent=Msa0315430-mRNA-1 |
| Gene Sequence |
| Protein sequence |
