Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1284060 | sp|P46287|RL11_MEDSA | 98.343 | 181 | 3 | 0 | 14 | 194 | 1 | 181 | 2.66e-130 | 366 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1284060 | G7L8I9 | 98.343 | 181 | 3 | 0 | 14 | 194 | 1 | 181 | 9.33e-128 | 366 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001760 | Msa1284060 | 0.856121 | 3.985225e-62 | -8.615850e-47 |
| Msa0016350 | Msa1284060 | 0.809678 | 1.680360e-50 | -8.615850e-47 |
| Msa0021290 | Msa1284060 | 0.822473 | 2.324553e-53 | -8.615850e-47 |
| Msa0021320 | Msa1284060 | 0.817663 | 2.933606e-52 | -8.615850e-47 |
| Msa0027590 | Msa1284060 | 0.806510 | 7.944595e-50 | -8.615850e-47 |
| Msa0040220 | Msa1284060 | 0.855068 | 8.083465e-62 | -8.615850e-47 |
| Msa0087910 | Msa1284060 | 0.851810 | 6.964205e-61 | -8.615850e-47 |
| Msa0089540 | Msa1284060 | 0.807013 | 6.217781e-50 | -8.615850e-47 |
| Msa0114600 | Msa1284060 | 0.819327 | 1.230986e-52 | -8.615850e-47 |
| Msa0116600 | Msa1284060 | 0.802696 | 4.963299e-49 | -8.615850e-47 |
| Msa0116690 | Msa1284060 | 0.810483 | 1.126885e-50 | -8.615850e-47 |
| Msa0602900 | Msa1284060 | 0.825257 | 5.174326e-54 | -8.615850e-47 |
| Msa0605890 | Msa1284060 | 0.801219 | 9.984916e-49 | -8.615850e-47 |
| Msa0619230 | Msa1284060 | 0.829580 | 4.753355e-55 | -8.615850e-47 |
| Msa0643960 | Msa1284060 | 0.828359 | 9.395104e-55 | -8.615850e-47 |
| Msa0648620 | Msa1284060 | 0.811131 | 8.163243e-51 | -8.615850e-47 |
| Msa0648670 | Msa1284060 | 0.825774 | 3.901512e-54 | -8.615850e-47 |
| Msa0653060 | Msa1284060 | 0.803297 | 3.728934e-49 | -8.615850e-47 |
| Msa0694400 | Msa1284060 | 0.859019 | 5.524298e-63 | -8.615850e-47 |
| Msa0708630 | Msa1284060 | 0.868135 | 8.176614e-66 | -8.615850e-47 |
| Msa0741510 | Msa1284060 | 0.817723 | 2.844784e-52 | -8.615850e-47 |
| Msa0748350 | Msa1284060 | 0.808215 | 3.455522e-50 | -8.615850e-47 |
| Msa0790450 | Msa1284060 | 0.832560 | 8.815884e-56 | -8.615850e-47 |
| Msa0128330 | Msa1284060 | 0.829968 | 3.824295e-55 | -8.615850e-47 |
| Msa0132460 | Msa1284060 | 0.867816 | 1.035168e-65 | -8.615850e-47 |
| Msa0134580 | Msa1284060 | 0.867103 | 1.750718e-65 | -8.615850e-47 |
| Msa0167860 | Msa1284060 | 0.825100 | 5.633386e-54 | -8.615850e-47 |
| Msa0173250 | Msa1284060 | 0.805059 | 1.602758e-49 | -8.615850e-47 |
| Msa0174580 | Msa1284060 | 0.821778 | 3.369255e-53 | -8.615850e-47 |
| Msa0182050 | Msa1284060 | 0.869039 | 4.172546e-66 | -8.615850e-47 |
| Msa0182100 | Msa1284060 | 0.846873 | 1.652328e-59 | -8.615850e-47 |
| Msa0188740 | Msa1284060 | 0.818774 | 1.644440e-52 | -8.615850e-47 |
| Msa0191450 | Msa1284060 | 0.807869 | 4.094865e-50 | -8.615850e-47 |
| Msa0191550 | Msa1284060 | 0.824857 | 6.429158e-54 | -8.615850e-47 |
| Msa0192050 | Msa1284060 | 0.815544 | 8.757065e-52 | -8.615850e-47 |
| Msa0192300 | Msa1284060 | 0.859821 | 3.171845e-63 | -8.615850e-47 |
| Msa0194940 | Msa1284060 | 0.807258 | 5.519513e-50 | -8.615850e-47 |
| Msa0195030 | Msa1284060 | 0.807963 | 3.909736e-50 | -8.615850e-47 |
| Msa0228540 | Msa1284060 | 0.801447 | 8.967442e-49 | -8.615850e-47 |
| Msa0237180 | Msa1284060 | 0.813854 | 2.073565e-51 | -8.615850e-47 |
| Msa1235950 | Msa1284060 | 0.822098 | 2.840851e-53 | -8.615850e-47 |
| Msa1235980 | Msa1284060 | 0.825662 | 4.147824e-54 | -8.615850e-47 |
| Msa1237040 | Msa1284060 | 0.848651 | 5.349617e-60 | -8.615850e-47 |
| Msa1255830 | Msa1284060 | 0.824126 | 9.555897e-54 | -8.615850e-47 |
| Msa1255850 | Msa1284060 | 0.832289 | 1.028975e-55 | -8.615850e-47 |
| Msa1258460 | Msa1284060 | 0.825106 | 5.617968e-54 | -8.615850e-47 |
| Msa1258540 | Msa1284060 | 0.801594 | 8.364973e-49 | -8.615850e-47 |
| Msa1278130 | Msa1284060 | 0.800780 | 1.227200e-48 | -8.615850e-47 |
| Msa1284060 | Msa1296090 | 0.827454 | 1.550531e-54 | -8.615850e-47 |
| Msa1284060 | Msa1317390 | 0.837295 | 5.656696e-57 | -8.615850e-47 |
| Msa1284060 | Msa1330730 | 0.808340 | 3.250390e-50 | -8.615850e-47 |
| Msa1284060 | Msa1333370 | 0.813228 | 2.847027e-51 | -8.615850e-47 |
| Msa1284060 | Msa1341780 | 0.827933 | 1.189763e-54 | -8.615850e-47 |
| Msa1284060 | Msa1347430 | 0.855166 | 7.569086e-62 | -8.615850e-47 |
| Msa1284060 | Msa1351020 | 0.813841 | 2.086858e-51 | -8.615850e-47 |
| Msa1284060 | Msa1351910 | 0.802343 | 5.867706e-49 | -8.615850e-47 |
| Msa1284060 | Msa1371410 | 0.822471 | 2.327688e-53 | -8.615850e-47 |
| Msa1284060 | Msa1385480 | 0.851738 | 7.298360e-61 | -8.615850e-47 |
| Msa1284060 | Msa1390760 | 0.828835 | 7.208924e-55 | -8.615850e-47 |
| Msa1284060 | Msa1415620 | 0.823826 | 1.123787e-53 | -8.615850e-47 |
| Msa1284060 | Msa1432310 | 0.813323 | 2.712517e-51 | -8.615850e-47 |
| Msa1284060 | Msa1450560 | 0.834488 | 2.911024e-56 | -8.615850e-47 |
| Msa1284060 | Msa1463570 | 0.828323 | 9.580945e-55 | -8.615850e-47 |
| Msa1284060 | Msa1465700 | 0.814836 | 1.257762e-51 | -8.615850e-47 |
| Msa0371490 | Msa1284060 | 0.828418 | 9.091134e-55 | -8.615850e-47 |
| Msa0377520 | Msa1284060 | 0.869679 | 2.584433e-66 | -8.615850e-47 |
| Msa0416210 | Msa1284060 | 0.801483 | 8.816245e-49 | -8.615850e-47 |
| Msa0426090 | Msa1284060 | 0.840981 | 6.266374e-58 | -8.615850e-47 |
| Msa0426250 | Msa1284060 | 0.847137 | 1.398495e-59 | -8.615850e-47 |
| Msa0432750 | Msa1284060 | 0.820459 | 6.782010e-53 | -8.615850e-47 |
| Msa0450150 | Msa1284060 | 0.811551 | 6.615355e-51 | -8.615850e-47 |
| Msa0472480 | Msa1284060 | 0.837433 | 5.212974e-57 | -8.615850e-47 |
| Msa0473390 | Msa1284060 | 0.861346 | 1.094102e-63 | -8.615850e-47 |
| Msa0475810 | Msa1284060 | 0.832934 | 7.118598e-56 | -8.615850e-47 |
| Msa0479980 | Msa1284060 | 0.820962 | 5.198393e-53 | -8.615850e-47 |
| Msa0481520 | Msa1284060 | 0.812275 | 4.600661e-51 | -8.615850e-47 |
| Msa0482260 | Msa1284060 | 0.808715 | 2.702806e-50 | -8.615850e-47 |
| Msa0482560 | Msa1284060 | 0.803401 | 3.547579e-49 | -8.615850e-47 |
| Msa1025200 | Msa1284060 | 0.837768 | 4.276574e-57 | -8.615850e-47 |
| Msa1025220 | Msa1284060 | 0.833774 | 4.396572e-56 | -8.615850e-47 |
| Msa1040160 | Msa1284060 | 0.808265 | 3.371144e-50 | -8.615850e-47 |
| Msa1047020 | Msa1284060 | 0.846801 | 1.728756e-59 | -8.615850e-47 |
| Msa1050100 | Msa1284060 | 0.803131 | 4.036159e-49 | -8.615850e-47 |
| Msa1054280 | Msa1284060 | 0.830652 | 2.602888e-55 | -8.615850e-47 |
| Msa1068660 | Msa1284060 | 0.804720 | 1.886561e-49 | -8.615850e-47 |
| Msa1083370 | Msa1284060 | 0.820531 | 6.529532e-53 | -8.615850e-47 |
| Msa1085850 | Msa1284060 | 0.825337 | 4.952063e-54 | -8.615850e-47 |
| Msa0270160 | Msa1284060 | 0.813163 | 2.940965e-51 | -8.615850e-47 |
| Msa0277600 | Msa1284060 | 0.832664 | 8.310891e-56 | -8.615850e-47 |
| Msa0301250 | Msa1284060 | 0.852487 | 4.469187e-61 | -8.615850e-47 |
| Msa0313060 | Msa1284060 | 0.876334 | 1.516709e-68 | -8.615850e-47 |
| Msa0315430 | Msa1284060 | 0.857592 | 1.469641e-62 | -8.615850e-47 |
| Msa0315660 | Msa1284060 | 0.816866 | 4.433656e-52 | -8.615850e-47 |
| Msa0340560 | Msa1284060 | 0.849481 | 3.144944e-60 | -8.615850e-47 |
| Msa1116940 | Msa1284060 | 0.837643 | 4.605266e-57 | -8.615850e-47 |
| Msa1124850 | Msa1284060 | 0.811299 | 7.503382e-51 | -8.615850e-47 |
| Msa1126690 | Msa1284060 | 0.825781 | 3.888112e-54 | -8.615850e-47 |
| Msa1136880 | Msa1284060 | 0.815026 | 1.141345e-51 | -8.615850e-47 |
| Msa1180000 | Msa1284060 | 0.808615 | 2.838390e-50 | -8.615850e-47 |
| Msa1218610 | Msa1284060 | 0.830108 | 3.535528e-55 | -8.615850e-47 |
| Msa1219760 | Msa1284060 | 0.812364 | 4.401202e-51 | -8.615850e-47 |
| Msa0511760 | Msa1284060 | 0.806748 | 7.076518e-50 | -8.615850e-47 |
| Msa0517480 | Msa1284060 | 0.846786 | 1.745286e-59 | -8.615850e-47 |
| Msa0529900 | Msa1284060 | 0.807057 | 6.085655e-50 | -8.615850e-47 |
| Msa0547920 | Msa1284060 | 0.830119 | 3.513082e-55 | -8.615850e-47 |
| Msa0573550 | Msa1284060 | 0.868484 | 6.311202e-66 | -8.615850e-47 |
| Msa0597240 | Msa1284060 | 0.828802 | 7.341656e-55 | -8.615850e-47 |
| Msa0846900 | Msa1284060 | 0.810673 | 1.025277e-50 | -8.615850e-47 |
| Msa0848560 | Msa1284060 | 0.806808 | 6.871568e-50 | -8.615850e-47 |
| Msa0929680 | Msa1284060 | 0.827903 | 1.209677e-54 | -8.615850e-47 |
| Msa0929700 | Msa1284060 | 0.871233 | 7.987259e-67 | -8.615850e-47 |
| Msa0930100 | Msa1284060 | 0.853161 | 2.868798e-61 | -8.615850e-47 |
| Msa0930360 | Msa1284060 | 0.800363 | 1.492464e-48 | -8.615850e-47 |
| Msa0930790 | Msa1284060 | 0.825855 | 3.733381e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1284060 | MtrunA17_Chr8g0355901 | 98.343 | 181 | 3 | 0 | 14 | 194 | 1 | 181 | 1.80e-131 | 366 |
| Msa1284060 | MtrunA17_Chr3g0078591 | 98.333 | 180 | 3 | 0 | 15 | 194 | 3 | 182 | 1.08e-130 | 364 |
| Msa1284060 | MtrunA17_Chr4g0041531 | 97.238 | 181 | 5 | 0 | 14 | 194 | 1 | 181 | 1.37e-130 | 363 |
| Msa1284060 | MtrunA17_Chr3g0078581 | 81.818 | 143 | 26 | 0 | 51 | 193 | 2 | 144 | 4.29e-84 | 245 |
| Msa1284060 | MtrunA17_Chr7g0264261 | 85.714 | 42 | 6 | 0 | 14 | 55 | 1 | 42 | 6.55e-17 | 72.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1284060 | AT2G42740.1 | 95.580 | 181 | 8 | 0 | 14 | 194 | 1 | 181 | 5.75e-128 | 357 |
| Msa1284060 | AT4G18730.1 | 95.028 | 181 | 9 | 0 | 14 | 194 | 1 | 181 | 2.67e-127 | 356 |
| Msa1284060 | AT3G58700.1 | 95.028 | 181 | 9 | 0 | 14 | 194 | 1 | 181 | 2.67e-127 | 356 |
| Msa1284060 | AT5G45775.2 | 95.028 | 181 | 9 | 0 | 14 | 194 | 1 | 181 | 2.67e-127 | 356 |
| Msa1284060 | AT5G45775.1 | 95.906 | 171 | 7 | 0 | 24 | 194 | 1 | 171 | 2.81e-121 | 340 |
Find 59 sgRNAs with CRISPR-Local
Find 188 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATCCTTCAACTGGCATTTA+TGG | 0.115122 | 8_3:-26077992 | Msa1284060:CDS |
| TTTAGTGATACTGGTTGTTT+TGG | 0.242495 | 8_3:-26078515 | Msa1284060:CDS |
| CGATACACTGTCCGTTCTTT+TGG | 0.247965 | 8_3:-26078650 | Msa1284060:CDS |
| CGACAAGGCAATGCAGCTTT+TGG | 0.255810 | 8_3:-26078582 | Msa1284060:CDS |
| GCTTGCTATGTGACTGTTAG+AGG | 0.285727 | 8_3:-26078605 | Msa1284060:CDS |
| AATTCAGGAGCATATTGATT+TGG | 0.303290 | 8_3:-26078486 | Msa1284060:CDS |
| TAAAATTACCTTTGCAGCTC+TGG | 0.312435 | 8_3:+26080752 | None:intergenic |
| ATTCAGGAGCATATTGATTT+GGG | 0.346376 | 8_3:-26078485 | Msa1284060:CDS |
| CTTTGGAAAACACTGGGGTT+TGG | 0.360701 | 8_3:+26080630 | None:intergenic |
| GAGGTTGTTGTTGTGCCATT+TGG | 0.362192 | 8_3:+26080977 | None:intergenic |
| TTGTTGAGATAACAAAATAA+AGG | 0.373551 | 8_3:+26077736 | None:intergenic |
| AGGTTGTTGTTGTGCCATTT+GGG | 0.378956 | 8_3:+26080978 | None:intergenic |
| TTGTTATCTCAACAATGAAT+TGG | 0.389105 | 8_3:-26077728 | Msa1284060:three_prime_UTR |
| CTCAGGTATGATCCTTCAAC+TGG | 0.406013 | 8_3:-26078001 | Msa1284060:intron |
| CTTCCGTTTCCAACCTCAAA+TGG | 0.415309 | 8_3:-26080953 | Msa1284060:intron |
| AGGCGATTGTTTAGTTACTT+AGG | 0.430278 | 8_3:-26077814 | Msa1284060:exon |
| AAAAGAAAGCGTACCATTTG+AGG | 0.439221 | 8_3:+26080940 | None:intergenic |
| TTCGTTGTTCTGGAGCGTCC+TGG | 0.441611 | 8_3:-26077959 | Msa1284060:CDS |
| TGAGATAACAAAATAAAGGT+TGG | 0.453682 | 8_3:+26077740 | None:intergenic |
| GTTGTTGTGCCATTTGGGAT+TGG | 0.453869 | 8_3:+26080983 | None:intergenic |
| CTCGTTCTTAATATCTCTGT+TGG | 0.461901 | 8_3:-26080795 | Msa1284060:CDS |
| CTTCCGTTTCCAATCCCAAA+TGG | 0.466448 | 8_3:-26080992 | Msa1284060:exon |
| CGTCCTTTGTTACGCGATGT+TGG | 0.468785 | 8_3:+26077891 | None:intergenic |
| ATTCCATAAATGCCAGTTGA+AGG | 0.482057 | 8_3:+26077989 | None:intergenic |
| TTCAACTGGCATTTATGGAA+TGG | 0.497930 | 8_3:-26077987 | Msa1284060:CDS |
| CTGAACCTTGATATCCCTCA+TGG | 0.500440 | 8_3:+26080821 | None:intergenic |
| TATAAACCTTTGGAAAACAC+TGG | 0.500470 | 8_3:+26080623 | None:intergenic |
| AATATCTCTGTTGGTGAAAG+TGG | 0.507687 | 8_3:-26080786 | Msa1284060:CDS |
| GTACCATTTGAGGTTGGAAA+CGG | 0.514068 | 8_3:+26080950 | None:intergenic |
| TAAGTAACTAAACAATCGCC+TGG | 0.515662 | 8_3:+26077816 | None:intergenic |
| GGGACGTCGTCGTCGGTGCA+AGG | 0.515936 | 8_3:-26077927 | Msa1284060:CDS |
| TCACACCTTCATATTTCACT+TGG | 0.516049 | 8_3:+26077852 | None:intergenic |
| CGACGTCCCACACGGTAACC+AGG | 0.522429 | 8_3:+26077941 | None:intergenic |
| CAATCGCCTGGGACTTGTTG+AGG | 0.523910 | 8_3:+26077828 | None:intergenic |
| ATAAACCTTTGGAAAACACT+GGG | 0.526168 | 8_3:+26080624 | None:intergenic |
| CGTCGGTGCAAGGCTCGTGT+TGG | 0.539971 | 8_3:-26077917 | Msa1284060:CDS |
| GAAAGCGTACCATTTGAGGT+TGG | 0.546416 | 8_3:+26080944 | None:intergenic |
| GAACACCATGAGGGATATCA+AGG | 0.552248 | 8_3:-26080826 | Msa1284060:CDS |
| GAGCGTCCTGGTTACCGTGT+GGG | 0.553181 | 8_3:-26077947 | Msa1284060:CDS |
| TTCTTCTAATACCAAAAGAA+CGG | 0.565907 | 8_3:+26078639 | None:intergenic |
| ACCGTGTGGGACGTCGTCGT+CGG | 0.567737 | 8_3:-26077934 | Msa1284060:CDS |
| GTGCCATTTGGGATTGGAAA+CGG | 0.570169 | 8_3:+26080989 | None:intergenic |
| GATTGGAAACGGAAGAAGAG+AGG | 0.576166 | 8_3:+26081000 | None:intergenic |
| TGGTTCCAAGTGAAATATGA+AGG | 0.576763 | 8_3:-26077857 | Msa1284060:CDS |
| TCGTCTCACCAGAGCTGCAA+AGG | 0.586053 | 8_3:-26080760 | Msa1284060:intron |
| TGTGATCCTCAACAAGTCCC+AGG | 0.588999 | 8_3:-26077834 | Msa1284060:CDS |
| AATCCAACATCGCGTAACAA+AGG | 0.595227 | 8_3:-26077894 | Msa1284060:CDS |
| TGAGGTTGGAAACGGAAGAG+AGG | 0.621017 | 8_3:+26080958 | None:intergenic |
| CAAAGGACGATGCTATGAAG+TGG | 0.633896 | 8_3:-26077877 | Msa1284060:CDS |
| AAGTAACTAAACAATCGCCT+GGG | 0.633971 | 8_3:+26077817 | None:intergenic |
| GGAGCGTCCTGGTTACCGTG+TGG | 0.638331 | 8_3:-26077948 | Msa1284060:CDS |
| AGAAACTCTCGAACACCATG+AGG | 0.653183 | 8_3:-26080836 | Msa1284060:CDS |
| ACCGACGACGACGTCCCACA+CGG | 0.654712 | 8_3:+26077933 | None:intergenic |
| TGTGACTGTTAGAGGCGACA+AGG | 0.664589 | 8_3:-26078597 | Msa1284060:CDS |
| TGATGTGATGTGATGTGATG+CGG | 0.665628 | 8_3:+26081031 | None:intergenic |
| TAAACCTTTGGAAAACACTG+GGG | 0.679293 | 8_3:+26080625 | None:intergenic |
| GAAACTCTCGAACACCATGA+GGG | 0.686507 | 8_3:-26080835 | Msa1284060:CDS |
| TGATGTGATGTGATGCGGTG+CGG | 0.693407 | 8_3:+26081036 | None:intergenic |
| CAGGTGTTGGAACAACTCAG+TGG | 0.734121 | 8_3:-26080653 | Msa1284060:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTATATTTTTATATTTA+TGG | - | chr8_3:26079280-26079299 | Msa1284060:intron | 0.0% |
| !!! | TAATTGATTTTAATAGTTTA+GGG | - | chr8_3:26078411-26078430 | Msa1284060:intron | 10.0% |
| !!! | TTTCATTTTTTGTATTTATC+AGG | - | chr8_3:26078001-26078020 | Msa1284060:intron | 15.0% |
| !! | CAAAATTAAATATAAACCTT+TGG | + | chr8_3:26078063-26078082 | None:intergenic | 15.0% |
| !! | AACTATTAAAATCAACAAAA+AGG | - | chr8_3:26078301-26078320 | Msa1284060:intron | 15.0% |
| !! | CTAAACTATTAAAATCAATT+AGG | + | chr8_3:26078412-26078431 | None:intergenic | 15.0% |
| !!! | CTAATTGATTTTAATAGTTT+AGG | - | chr8_3:26078410-26078429 | Msa1284060:intron | 15.0% |
| !!! | AAGATTGTTGATAAAAATTA+AGG | - | chr8_3:26078499-26078518 | Msa1284060:CDS | 15.0% |
| !!! | AGATTGTTGATAAAAATTAA+GGG | - | chr8_3:26078500-26078519 | Msa1284060:CDS | 15.0% |
| !! | CAAGACAAAAATAAAAAATT+GGG | + | chr8_3:26078740-26078759 | None:intergenic | 15.0% |
| !! | TCAAGACAAAAATAAAAAAT+TGG | + | chr8_3:26078741-26078760 | None:intergenic | 15.0% |
| !!! | TATTTTTGTCTTGAAAAAAA+TGG | - | chr8_3:26078747-26078766 | Msa1284060:intron | 15.0% |
| !! | TATTTATAAATCATCAACAT+CGG | + | chr8_3:26078898-26078917 | None:intergenic | 15.0% |
| !! | AATTTAGAAAACAAATGTTA+AGG | + | chr8_3:26079251-26079270 | None:intergenic | 15.0% |
| !!! | TATGATTGTTTATAAGTTTT+AGG | - | chr8_3:26079523-26079542 | Msa1284060:intron | 15.0% |
| !! | ATAAAAATAAATTGGTGTAT+AGG | + | chr8_3:26079783-26079802 | None:intergenic | 15.0% |
| !!! | TATTATTTTACCTTGAAAAT+TGG | - | chr8_3:26079800-26079819 | Msa1284060:intron | 15.0% |
| !! | ATCTAATAGATATGAAAATT+TGG | + | chr8_3:26079951-26079970 | None:intergenic | 15.0% |
| !!! | TCAAAGTTTTACATAATTTT+AGG | - | chr8_3:26080438-26080457 | Msa1284060:intron | 15.0% |
| !!! | AAAATTTGAAATTATGTCTT+TGG | - | chr8_3:26080541-26080560 | Msa1284060:intron | 15.0% |
| !! | TACAAAAAATCATAATGATT+CGG | - | chr8_3:26081012-26081031 | Msa1284060:five_prime_UTR | 15.0% |
| !! | TATTCAATATACAATCAACT+AGG | + | chr8_3:26078232-26078251 | None:intergenic | 20.0% |
| !! | AACTATTAAAATCAATTAGG+AGG | + | chr8_3:26078409-26078428 | None:intergenic | 20.0% |
| !!! | ATCACACATTTTATTATTTG+AGG | + | chr8_3:26078799-26078818 | None:intergenic | 20.0% |
| !!! | GATTGTGTTTTTTTACTAAA+AGG | - | chr8_3:26078989-26079008 | Msa1284060:intron | 20.0% |
| !! | TGATTTGAATGAGAATAAAA+AGG | - | chr8_3:26079082-26079101 | Msa1284060:intron | 20.0% |
| !!! | TTCTTCTGGTATTTTAATTT+AGG | + | chr8_3:26079178-26079197 | None:intergenic | 20.0% |
| !!! | TTTTCAAGTCACAATAATTT+GGG | - | chr8_3:26079695-26079714 | Msa1284060:intron | 20.0% |
| !! | TAATGTTAATGATGATAGAA+TGG | - | chr8_3:26079745-26079764 | Msa1284060:intron | 20.0% |
| !!! | TAATCATTTAGTTCTACAAA+AGG | - | chr8_3:26080344-26080363 | Msa1284060:intron | 20.0% |
| !!! | TAATCATTTAGTTCTACAAA+AGG | - | chr8_3:26080344-26080363 | Msa1284060:intron | 20.0% |
| !!! | GTTTTACATAATTTTAGGAT+AGG | - | chr8_3:26080443-26080462 | Msa1284060:intron | 20.0% |
| !! | AACATAAATGATAACAAACT+TGG | + | chr8_3:26080637-26080656 | None:intergenic | 20.0% |
| !! | TTGTTGAGATAACAAAATAA+AGG | + | chr8_3:26080940-26080959 | None:intergenic | 20.0% |
| !! | TTTTTGTATTTATCAGGTGT+TGG | - | chr8_3:26078007-26078026 | Msa1284060:intron | 25.0% |
| ! | TTCTTCTGGTATTTACATTT+AGG | + | chr8_3:26078589-26078608 | None:intergenic | 25.0% |
| ! | AAAACAACCAAAAACTTTCA+AGG | + | chr8_3:26078615-26078634 | None:intergenic | 25.0% |
| !! | GTTAAATTGCATTGATAGAA+AGG | - | chr8_3:26078678-26078697 | Msa1284060:intron | 25.0% |
| !!! | TTTTTTTTTTTGCTGCACAA+AGG | - | chr8_3:26078930-26078949 | Msa1284060:intron | 25.0% |
| ! | GAATGAGAATAAAAAGGAAA+TGG | - | chr8_3:26079088-26079107 | Msa1284060:intron | 25.0% |
| !!! | CTGTTGACTCAATTATAAAA+TGG | + | chr8_3:26079116-26079135 | None:intergenic | 25.0% |
| ! | AAAACAACCAAAAACTTTCA+AGG | + | chr8_3:26078615-26078634 | None:intergenic | 25.0% |
| !! | TGCTAAATAATCAAGTTTTC+TGG | - | chr8_3:26079387-26079406 | Msa1284060:intron | 25.0% |
| ! | ATTACCATTCTATTAGATAC+TGG | - | chr8_3:26079415-26079434 | Msa1284060:intron | 25.0% |
| !! | TTCTTCTGGTATTTTCATTT+AGG | + | chr8_3:26079653-26079672 | None:intergenic | 25.0% |
| !! | AGAAAATCCTTGAAAACTTT+TGG | - | chr8_3:26079669-26079688 | Msa1284060:intron | 25.0% |
| !!! | GTTTTCAAGTCACAATAATT+TGG | - | chr8_3:26079694-26079713 | Msa1284060:intron | 25.0% |
| !! | TTTCAAGTCACAATAATTTG+GGG | - | chr8_3:26079696-26079715 | Msa1284060:intron | 25.0% |
| !! | TTTTCATATCTATTAGATGC+TGG | - | chr8_3:26079953-26079972 | Msa1284060:intron | 25.0% |
| ! | TTTCATATCTATTAGATGCT+GGG | - | chr8_3:26079954-26079973 | Msa1284060:intron | 25.0% |
| ! | AAAAACAACAATCAGTTAAC+TGG | + | chr8_3:26079980-26079999 | None:intergenic | 25.0% |
| ! | TTCTTCTAATACCAAAAGAA+CGG | + | chr8_3:26080037-26080056 | None:intergenic | 25.0% |
| !!! | AGAAGAAATTTTAGTGATAC+TGG | - | chr8_3:26080149-26080168 | Msa1284060:intron | 25.0% |
| ! | AAACTATGGTTTAAGCTATT+AGG | - | chr8_3:26080412-26080431 | Msa1284060:intron | 25.0% |
| ! | TGAAATGATAAAACACTCAA+AGG | + | chr8_3:26080570-26080589 | None:intergenic | 25.0% |
| ! | GATGGAATATCATTAGAAAT+CGG | + | chr8_3:26080610-26080629 | None:intergenic | 25.0% |
| ! | ATAAATGATAACAAACTTGG+TGG | + | chr8_3:26080634-26080653 | None:intergenic | 25.0% |
| !! | TTTAACATTGTTTCTTTCTC+AGG | - | chr8_3:26080655-26080674 | Msa1284060:intron | 25.0% |
| ! | TGAGATAACAAAATAAAGGT+TGG | + | chr8_3:26080936-26080955 | None:intergenic | 25.0% |
| ! | TTGTTATCTCAACAATGAAT+TGG | - | chr8_3:26080945-26080964 | Msa1284060:intron | 25.0% |
| GGAATGAAAATCAGAAAGAA+TGG | + | chr8_3:26077759-26077778 | None:intergenic | 30.0% | |
| ! | CGAAAAATGCATTTTCTTAC+AGG | - | chr8_3:26077805-26077824 | Msa1284060:exon | 30.0% |
| ! | ATGCATTTTCTTACAGGTTT+CGG | - | chr8_3:26077811-26077830 | Msa1284060:exon | 30.0% |
| ! | ATAAACCTTTGGAAAACACT+GGG | + | chr8_3:26078052-26078071 | None:intergenic | 30.0% |
| ! | TATAAACCTTTGGAAAACAC+TGG | + | chr8_3:26078053-26078072 | None:intergenic | 30.0% |
| ! | TCCTTCAATTTGGTTTACTT+CGG | - | chr8_3:26078345-26078364 | Msa1284060:intron | 30.0% |
| TAATAGTTTAGGGACTAAAC+TGG | - | chr8_3:26078421-26078440 | Msa1284060:intron | 30.0% | |
| TTATATAATGAGTCAACAGC+AGG | - | chr8_3:26078528-26078547 | Msa1284060:CDS | 30.0% | |
| TATATAATGAGTCAACAGCA+GGG | - | chr8_3:26078529-26078548 | Msa1284060:CDS | 30.0% | |
| ! | AGAAGATCCTTGAAAGTTTT+TGG | - | chr8_3:26078605-26078624 | Msa1284060:CDS | 30.0% |
| !! | GTTTTCAAGACACAATTATC+TGG | - | chr8_3:26078630-26078649 | Msa1284060:CDS | 30.0% |
| AATGGTTGAAAACGATAGAA+TGG | - | chr8_3:26078765-26078784 | Msa1284060:intron | 30.0% | |
| !! | CGATTGTTTTGTATATCAGT+AGG | - | chr8_3:26079014-26079033 | Msa1284060:intron | 30.0% |
| TTTATAATTGAGTCAACAGC+AGG | - | chr8_3:26079117-26079136 | Msa1284060:intron | 30.0% | |
| TTATAATTGAGTCAACAGCA+GGG | - | chr8_3:26079118-26079137 | Msa1284060:intron | 30.0% | |
| !!! | ATTTTAATTTAGGCTCCAAG+CGG | + | chr8_3:26079168-26079187 | None:intergenic | 30.0% |
| ! | AGAAGATCCTTGAAAGTTTT+TGG | - | chr8_3:26078605-26078624 | Msa1284060:CDS | 30.0% |
| !! | GTTTTCAAGACACAATTATC+TGG | - | chr8_3:26078630-26078649 | Msa1284060:CDS | 30.0% |
| AACTTGATTATTTAGCATGC+AGG | + | chr8_3:26079384-26079403 | None:intergenic | 30.0% | |
| AGAAGAGGAAAATAAAAGCA+AGG | + | chr8_3:26079452-26079471 | None:intergenic | 30.0% | |
| TTTAACGAGAATTGAACTCA+AGG | - | chr8_3:26079565-26079584 | Msa1284060:intron | 30.0% | |
| TTAACGAGAATTGAACTCAA+GGG | - | chr8_3:26079566-26079585 | Msa1284060:intron | 30.0% | |
| TATTATAATTGAGTCACAGC+AGG | - | chr8_3:26079592-26079611 | Msa1284060:intron | 30.0% | |
| ATTATAATTGAGTCACAGCA+GGG | - | chr8_3:26079593-26079612 | Msa1284060:intron | 30.0% | |
| !! | AGTTTTCAAGGATTTTCTTC+TGG | + | chr8_3:26079667-26079686 | None:intergenic | 30.0% |
| ! | AAAACAGCCAAAAGTTTTCA+AGG | + | chr8_3:26079679-26079698 | None:intergenic | 30.0% |
| AGATATGAAAATTTGGCGAT+CGG | + | chr8_3:26079944-26079963 | None:intergenic | 30.0% | |
| !! | TTTAGTGATACTGGTTGTTT+TGG | - | chr8_3:26080158-26080177 | Msa1284060:intron | 30.0% |
| ! | AATTCAGGAGCATATTGATT+TGG | - | chr8_3:26080187-26080206 | Msa1284060:intron | 30.0% |
| !! | ATTCAGGAGCATATTGATTT+GGG | - | chr8_3:26080188-26080207 | Msa1284060:intron | 30.0% |
| AGTTCTACAAAAGGAAACTA+TGG | - | chr8_3:26080398-26080417 | Msa1284060:intron | 30.0% | |
| ! | AAAAGAAAGCGTACCATTTG+AGG | + | chr8_3:26077736-26077755 | None:intergenic | 35.0% |
| GAAGACAACAACAACAACAA+AGG | + | chr8_3:26077780-26077799 | None:intergenic | 35.0% | |
| CTCGTTCTTAATATCTCTGT+TGG | - | chr8_3:26077878-26077897 | Msa1284060:CDS | 35.0% | |
| ! | AATATCTCTGTTGGTGAAAG+TGG | - | chr8_3:26077887-26077906 | Msa1284060:CDS | 35.0% |
| TAAAATTACCTTTGCAGCTC+TGG | + | chr8_3:26077924-26077943 | None:intergenic | 35.0% | |
| ! | TAAACCTTTGGAAAACACTG+GGG | + | chr8_3:26078051-26078070 | None:intergenic | 35.0% |
| !!! | GGATGAGACGTACATTTTTT+TGG | + | chr8_3:26078328-26078347 | None:intergenic | 35.0% |
| TCCGAAGTAAACCAAATTGA+AGG | + | chr8_3:26078349-26078368 | None:intergenic | 35.0% | |
| ! | TTCAATTTGGTTTACTTCGG+AGG | - | chr8_3:26078348-26078367 | Msa1284060:intron | 35.0% |
| ! | TCAATTTGGTTTACTTCGGA+GGG | - | chr8_3:26078349-26078368 | Msa1284060:intron | 35.0% |
| ATATAATGAGTCAACAGCAG+GGG | - | chr8_3:26078530-26078549 | Msa1284060:CDS | 35.0% | |
| ATTTACATTTAGGCTCCAAG+CGG | + | chr8_3:26078579-26078598 | None:intergenic | 35.0% | |
| AACTTTCAAGGATCTTCTTC+TGG | + | chr8_3:26078603-26078622 | None:intergenic | 35.0% | |
| GTGTGATCCATGTTTAATAG+TGG | - | chr8_3:26078812-26078831 | Msa1284060:intron | 35.0% | |
| TATAATTGAGTCAACAGCAG+GGG | - | chr8_3:26079119-26079138 | Msa1284060:intron | 35.0% | |
| AACTTTCAAGGATCTTCTTC+TGG | + | chr8_3:26078603-26078622 | None:intergenic | 35.0% | |
| ! | TGCCTAAATGTCACATGTTT+TGG | - | chr8_3:26079328-26079347 | Msa1284060:intron | 35.0% |
| ! | GCCTAAATGTCACATGTTTT+GGG | - | chr8_3:26079329-26079348 | Msa1284060:intron | 35.0% |
| ACCCAAAACATGTGACATTT+AGG | + | chr8_3:26079333-26079352 | None:intergenic | 35.0% | |
| AGCACCAGTATCTAATAGAA+TGG | + | chr8_3:26079422-26079441 | None:intergenic | 35.0% | |
| GCTGTCAATAAGAAAAGAAG+AGG | + | chr8_3:26079467-26079486 | None:intergenic | 35.0% | |
| ACACTGTACGTGAATATTAC+AGG | - | chr8_3:26079492-26079511 | Msa1284060:intron | 35.0% | |
| TTATAATTGAGTCACAGCAG+GGG | - | chr8_3:26079594-26079613 | Msa1284060:intron | 35.0% | |
| ! | ATTTTCATTTAGGCTCCAAG+CGG | + | chr8_3:26079643-26079662 | None:intergenic | 35.0% |
| ! | TCATCTTCGACCAATTTTCA+AGG | + | chr8_3:26079813-26079832 | None:intergenic | 35.0% |
| TGAAAATTGGTCGAAGATGA+TGG | - | chr8_3:26079813-26079832 | Msa1284060:intron | 35.0% | |
| !!! | GATACTGGTTGTTTTGGATT+CGG | - | chr8_3:26080164-26080183 | Msa1284060:intron | 35.0% |
| !!! | TTGTTTTGGATTCGGAATTC+AGG | - | chr8_3:26080172-26080191 | Msa1284060:intron | 35.0% |
| TTGTTTAAACCAGTTTCGCA+TGG | + | chr8_3:26080282-26080301 | None:intergenic | 35.0% | |
| GTGTTTATCACAATGCATGT+TGG | - | chr8_3:26080465-26080484 | Msa1284060:intron | 35.0% | |
| ATTCCATAAATGCCAGTTGA+AGG | + | chr8_3:26080687-26080706 | None:intergenic | 35.0% | |
| TTCAACTGGCATTTATGGAA+TGG | - | chr8_3:26080686-26080705 | Msa1284060:intron | 35.0% | |
| !!! | AATGGACTTTTTCGTTGTTC+TGG | - | chr8_3:26080704-26080723 | Msa1284060:intron | 35.0% |
| TGGTTCCAAGTGAAATATGA+AGG | - | chr8_3:26080816-26080835 | Msa1284060:CDS | 35.0% | |
| TCACACCTTCATATTTCACT+TGG | + | chr8_3:26080824-26080843 | None:intergenic | 35.0% | |
| AAGTAACTAAACAATCGCCT+GGG | + | chr8_3:26080859-26080878 | None:intergenic | 35.0% | |
| TAAGTAACTAAACAATCGCC+TGG | + | chr8_3:26080860-26080879 | None:intergenic | 35.0% | |
| AGGCGATTGTTTAGTTACTT+AGG | - | chr8_3:26080859-26080878 | Msa1284060:intron | 35.0% | |
| TGATGTGATGTGATGTGATG+CGG | + | chr8_3:26077645-26077664 | None:intergenic | 40.0% | |
| !! | AGGTTGTTGTTGTGCCATTT+GGG | + | chr8_3:26077698-26077717 | None:intergenic | 40.0% |
| ! | GTACCATTTGAGGTTGGAAA+CGG | + | chr8_3:26077726-26077745 | None:intergenic | 40.0% |
| GTACGTCTCATCCTTCAATT+TGG | - | chr8_3:26078335-26078354 | Msa1284060:intron | 40.0% | |
| TTCGGAGGGACTAAATTGAA+TGG | - | chr8_3:26078363-26078382 | Msa1284060:intron | 40.0% | |
| TCGGAGGGACTAAATTGAAT+GGG | - | chr8_3:26078364-26078383 | Msa1284060:intron | 40.0% | |
| AATGGGTGGATGCACATTTA+AGG | - | chr8_3:26078381-26078400 | Msa1284060:intron | 40.0% | |
| ATGGGTGGATGCACATTTAA+GGG | - | chr8_3:26078382-26078401 | Msa1284060:intron | 40.0% | |
| CAAGCAGCCACTATTAAACA+TGG | + | chr8_3:26078822-26078841 | None:intergenic | 40.0% | |
| CTATTTCAGCACAAAACACG+TGG | + | chr8_3:26079877-26079896 | None:intergenic | 40.0% | |
| !! | GATAACAAACTTGGTGGTGA+TGG | + | chr8_3:26080628-26080647 | None:intergenic | 40.0% |
| GATCCTTCAACTGGCATTTA+TGG | - | chr8_3:26080681-26080700 | Msa1284060:intron | 40.0% | |
| AATCCAACATCGCGTAACAA+AGG | - | chr8_3:26080779-26080798 | Msa1284060:CDS | 40.0% | |
| GATTGGAAACGGAAGAAGAG+AGG | + | chr8_3:26077676-26077695 | None:intergenic | 45.0% | |
| CTTCCGTTTCCAATCCCAAA+TGG | - | chr8_3:26077681-26077700 | Msa1284060:three_prime_UTR | 45.0% | |
| !! | GTGCCATTTGGGATTGGAAA+CGG | + | chr8_3:26077687-26077706 | None:intergenic | 45.0% |
| !! | GTTGTTGTGCCATTTGGGAT+TGG | + | chr8_3:26077693-26077712 | None:intergenic | 45.0% |
| ! | GAGGTTGTTGTTGTGCCATT+TGG | + | chr8_3:26077699-26077718 | None:intergenic | 45.0% |
| CTTCCGTTTCCAACCTCAAA+TGG | - | chr8_3:26077720-26077739 | Msa1284060:three_prime_UTR | 45.0% | |
| ! | GAAAGCGTACCATTTGAGGT+TGG | + | chr8_3:26077732-26077751 | None:intergenic | 45.0% |
| AGAAACTCTCGAACACCATG+AGG | - | chr8_3:26077837-26077856 | Msa1284060:CDS | 45.0% | |
| GAAACTCTCGAACACCATGA+GGG | - | chr8_3:26077838-26077857 | Msa1284060:CDS | 45.0% | |
| GAACACCATGAGGGATATCA+AGG | - | chr8_3:26077847-26077866 | Msa1284060:CDS | 45.0% | |
| CTGAACCTTGATATCCCTCA+TGG | + | chr8_3:26077855-26077874 | None:intergenic | 45.0% | |
| ! | CTTTGGAAAACACTGGGGTT+TGG | + | chr8_3:26078046-26078065 | None:intergenic | 45.0% |
| ! | CAAACCCCAGTGTTTTCCAA+AGG | - | chr8_3:26078044-26078063 | Msa1284060:intron | 45.0% |
| GAGGGACTAAATTGAATGGG+TGG | - | chr8_3:26078367-26078386 | Msa1284060:intron | 45.0% | |
| TGGCGAGAGAGTGATAGTTT+AGG | - | chr8_3:26078441-26078460 | Msa1284060:intron | 45.0% | |
| GGCGAGAGAGTGATAGTTTA+GGG | - | chr8_3:26078442-26078461 | Msa1284060:intron | 45.0% | |
| ! | CGATACACTGTCCGTTCTTT+TGG | - | chr8_3:26080023-26080042 | Msa1284060:intron | 45.0% |
| !! | GCTTGCTATGTGACTGTTAG+AGG | - | chr8_3:26080068-26080087 | Msa1284060:intron | 45.0% |
| TAGTATGTGCCATGCGAAAC+TGG | - | chr8_3:26080270-26080289 | Msa1284060:intron | 45.0% | |
| CTCAGGTATGATCCTTCAAC+TGG | - | chr8_3:26080672-26080691 | Msa1284060:intron | 45.0% | |
| CAAAGGACGATGCTATGAAG+TGG | - | chr8_3:26080796-26080815 | Msa1284060:CDS | 45.0% | |
| !! | GTAAAATAATAAAAATAAAT+TGG | + | chr8_3:26079791-26079810 | None:intergenic | 5.0% |
| TGATGTGATGTGATGCGGTG+CGG | + | chr8_3:26077640-26077659 | None:intergenic | 50.0% | |
| TGAGGTTGGAAACGGAAGAG+AGG | + | chr8_3:26077718-26077737 | None:intergenic | 50.0% | |
| !! | CAGGTGTTGGAACAACTCAG+TGG | - | chr8_3:26078020-26078039 | Msa1284060:intron | 50.0% |
| ATGACTACTTGACTGCCGCT+TGG | - | chr8_3:26079150-26079169 | Msa1284060:intron | 50.0% | |
| TGTGACTGTTAGAGGCGACA+AGG | - | chr8_3:26080076-26080095 | Msa1284060:intron | 50.0% | |
| ! | CGACAAGGCAATGCAGCTTT+TGG | - | chr8_3:26080091-26080110 | Msa1284060:intron | 50.0% |
| !! | GCAATGCAGCTTTTGGAGAG+CGG | - | chr8_3:26080098-26080117 | Msa1284060:intron | 50.0% |
| !! | GCTTTTGGAGAGCGGTTTGA+AGG | - | chr8_3:26080106-26080125 | Msa1284060:intron | 50.0% |
| CGTCCTTTGTTACGCGATGT+TGG | + | chr8_3:26080785-26080804 | None:intergenic | 50.0% | |
| TGTGATCCTCAACAAGTCCC+AGG | - | chr8_3:26080839-26080858 | Msa1284060:CDS | 50.0% | |
| TCGTCTCACCAGAGCTGCAA+AGG | - | chr8_3:26077913-26077932 | Msa1284060:CDS | 55.0% | |
| ATGACTACCTGACTGCCGCT+TGG | - | chr8_3:26078561-26078580 | Msa1284060:CDS | 55.0% | |
| !! | TTCGTTGTTCTGGAGCGTCC+TGG | - | chr8_3:26080714-26080733 | Msa1284060:intron | 55.0% |
| !! | CAATCGCCTGGGACTTGTTG+AGG | + | chr8_3:26080848-26080867 | None:intergenic | 55.0% |
| TTAGGCTCCAAGCGGCAGTC+AGG | + | chr8_3:26078571-26078590 | None:intergenic | 60.0% | |
| ATGACTGCCTGACTGCCGCT+TGG | - | chr8_3:26079625-26079644 | Msa1284060:intron | 60.0% | |
| TTAGGCTCCAAGCGGCAGTC+AGG | + | chr8_3:26078571-26078590 | None:intergenic | 60.0% | |
| GAGCGTCCTGGTTACCGTGT+GGG | - | chr8_3:26080726-26080745 | Msa1284060:intron | 60.0% | |
| ! | GGAGCGTCCTGGTTACCGTG+TGG | - | chr8_3:26080725-26080744 | Msa1284060:intron | 65.0% |
| CGACGTCCCACACGGTAACC+AGG | + | chr8_3:26080735-26080754 | None:intergenic | 65.0% | |
| ACCGTGTGGGACGTCGTCGT+CGG | - | chr8_3:26080739-26080758 | Msa1284060:intron | 65.0% | |
| ACCGACGACGACGTCCCACA+CGG | + | chr8_3:26080743-26080762 | None:intergenic | 65.0% | |
| CGTCGGTGCAAGGCTCGTGT+TGG | - | chr8_3:26080756-26080775 | Msa1284060:intron | 65.0% | |
| GGGACGTCGTCGTCGGTGCA+AGG | - | chr8_3:26080746-26080765 | Msa1284060:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 26077631 | 26081064 | 26077631 | ID=Msa1284060;Name=Msa1284060 |
| chr8_3 | mRNA | 26077631 | 26081064 | 26077631 | ID=Msa1284060-mRNA-1;Parent=Msa1284060;Name=Msa1284060-mRNA-1;_AED=0.03;_eAED=0.03;_QI=69|1|1|1|1|1|5|192|194 |
| chr8_3 | exon | 26077631 | 26078018 | 26077631 | ID=Msa1284060-mRNA-1:exon:9082;Parent=Msa1284060-mRNA-1 |
| chr8_3 | exon | 26078479 | 26078674 | 26078479 | ID=Msa1284060-mRNA-1:exon:9081;Parent=Msa1284060-mRNA-1 |
| chr8_3 | exon | 26080630 | 26080672 | 26080630 | ID=Msa1284060-mRNA-1:exon:9080;Parent=Msa1284060-mRNA-1 |
| chr8_3 | exon | 26080761 | 26080868 | 26080761 | ID=Msa1284060-mRNA-1:exon:9079;Parent=Msa1284060-mRNA-1 |
| chr8_3 | exon | 26080954 | 26081064 | 26080954 | ID=Msa1284060-mRNA-1:exon:9078;Parent=Msa1284060-mRNA-1 |
| chr8_3 | five_prime_UTR | 26080996 | 26081064 | 26080996 | ID=Msa1284060-mRNA-1:five_prime_utr;Parent=Msa1284060-mRNA-1 |
| chr8_3 | CDS | 26080954 | 26080995 | 26080954 | ID=Msa1284060-mRNA-1:cds;Parent=Msa1284060-mRNA-1 |
| chr8_3 | CDS | 26080761 | 26080868 | 26080761 | ID=Msa1284060-mRNA-1:cds;Parent=Msa1284060-mRNA-1 |
| chr8_3 | CDS | 26080630 | 26080672 | 26080630 | ID=Msa1284060-mRNA-1:cds;Parent=Msa1284060-mRNA-1 |
| chr8_3 | CDS | 26078479 | 26078674 | 26078479 | ID=Msa1284060-mRNA-1:cds;Parent=Msa1284060-mRNA-1 |
| chr8_3 | CDS | 26077823 | 26078018 | 26077823 | ID=Msa1284060-mRNA-1:cds;Parent=Msa1284060-mRNA-1 |
| chr8_3 | three_prime_UTR | 26077631 | 26077822 | 26077631 | ID=Msa1284060-mRNA-1:three_prime_utr;Parent=Msa1284060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
