Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0021290 | sp|Q8RWG8|RBP1B_ARATH | 73.958 | 192 | 46 | 3 | 5 | 195 | 11 | 199 | 1.23e-97 | 286 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001760 | Msa0021290 | 0.817063 | 4.005353e-52 | -8.615850e-47 |
| Msa0021290 | Msa0021320 | 0.986654 | 1.630701e-167 | -8.615850e-47 |
| Msa0021290 | Msa0027590 | 0.809759 | 1.614334e-50 | -8.615850e-47 |
| Msa0021290 | Msa0033610 | 0.805251 | 1.461269e-49 | -8.615850e-47 |
| Msa0021290 | Msa0040220 | 0.871234 | 7.979613e-67 | -8.615850e-47 |
| Msa0021290 | Msa0044010 | 0.800598 | 1.337121e-48 | -8.615850e-47 |
| Msa0021290 | Msa0072570 | 0.804952 | 1.687546e-49 | -8.615850e-47 |
| Msa0021290 | Msa0087910 | 0.811937 | 5.453770e-51 | -8.615850e-47 |
| Msa0021290 | Msa0089540 | 0.816336 | 5.828658e-52 | -8.615850e-47 |
| Msa0021290 | Msa0089940 | 0.801704 | 7.939982e-49 | -8.615850e-47 |
| Msa0021290 | Msa0132460 | 0.840676 | 7.532518e-58 | -8.615850e-47 |
| Msa0021290 | Msa0134580 | 0.852271 | 5.151360e-61 | -8.615850e-47 |
| Msa0021290 | Msa0173250 | 0.865850 | 4.377264e-65 | -8.615850e-47 |
| Msa0021290 | Msa0182050 | 0.840776 | 7.093619e-58 | -8.615850e-47 |
| Msa0021290 | Msa0183720 | 0.807653 | 4.549684e-50 | -8.615850e-47 |
| Msa0021290 | Msa0188740 | 0.823201 | 1.573244e-53 | -8.615850e-47 |
| Msa0021290 | Msa0192050 | 0.878983 | 1.805747e-69 | -8.615850e-47 |
| Msa0021290 | Msa0192300 | 0.820045 | 8.439471e-53 | -8.615850e-47 |
| Msa0021290 | Msa0195030 | 0.827529 | 1.487992e-54 | -8.615850e-47 |
| Msa0021290 | Msa0228540 | 0.820078 | 8.295067e-53 | -8.615850e-47 |
| Msa0021290 | Msa0237180 | 0.824805 | 6.616528e-54 | -8.615850e-47 |
| Msa0021290 | Msa0243750 | 0.812744 | 3.634201e-51 | -8.615850e-47 |
| Msa0021290 | Msa0251920 | 0.809539 | 1.800255e-50 | -8.615850e-47 |
| Msa0021290 | Msa0265250 | 0.800381 | 1.480175e-48 | -8.615850e-47 |
| Msa0021290 | Msa0274940 | 0.812647 | 3.816196e-51 | -8.615850e-47 |
| Msa0021290 | Msa0282290 | 0.815660 | 8.251897e-52 | -8.615850e-47 |
| Msa0021290 | Msa0301250 | 0.810288 | 1.241849e-50 | -8.615850e-47 |
| Msa0021290 | Msa0313060 | 0.832856 | 7.443904e-56 | -8.615850e-47 |
| Msa0021290 | Msa0315660 | 0.831283 | 1.822298e-55 | -8.615850e-47 |
| Msa0021290 | Msa0356640 | 0.863911 | 1.775000e-64 | -8.615850e-47 |
| Msa0021290 | Msa0368640 | 0.811065 | 8.434473e-51 | -8.615850e-47 |
| Msa0021290 | Msa0371490 | 0.810819 | 9.533249e-51 | -8.615850e-47 |
| Msa0021290 | Msa0373550 | 0.808081 | 3.689346e-50 | -8.615850e-47 |
| Msa0021290 | Msa0377520 | 0.830225 | 3.310263e-55 | -8.615850e-47 |
| Msa0021290 | Msa0385030 | 0.816217 | 6.197053e-52 | -8.615850e-47 |
| Msa0021290 | Msa0388250 | 0.822393 | 2.426972e-53 | -8.615850e-47 |
| Msa0021290 | Msa0416210 | 0.802040 | 6.773969e-49 | -8.615850e-47 |
| Msa0021290 | Msa0426090 | 0.839779 | 1.291563e-57 | -8.615850e-47 |
| Msa0021290 | Msa0426250 | 0.821694 | 3.524126e-53 | -8.615850e-47 |
| Msa0021290 | Msa0430130 | 0.854093 | 1.548120e-61 | -8.615850e-47 |
| Msa0021290 | Msa0433630 | 0.808182 | 3.511834e-50 | -8.615850e-47 |
| Msa0021290 | Msa0437500 | 0.838501 | 2.769249e-57 | -8.615850e-47 |
| Msa0021290 | Msa0468660 | 0.815292 | 9.963072e-52 | -8.615850e-47 |
| Msa0021290 | Msa0472480 | 0.842523 | 2.455700e-58 | -8.615850e-47 |
| Msa0021290 | Msa0473390 | 0.816336 | 5.828658e-52 | -8.615850e-47 |
| Msa0021290 | Msa0475810 | 0.867001 | 1.886976e-65 | -8.615850e-47 |
| Msa0021290 | Msa0477480 | 0.812927 | 3.313196e-51 | -8.615850e-47 |
| Msa0021290 | Msa0480280 | 0.801414 | 9.107037e-49 | -8.615850e-47 |
| Msa0021290 | Msa0495620 | 0.860504 | 1.972360e-63 | -8.615850e-47 |
| Msa0021290 | Msa0517480 | 0.812891 | 3.373956e-51 | -8.615850e-47 |
| Msa0021290 | Msa0521510 | 0.818792 | 1.629245e-52 | -8.615850e-47 |
| Msa0021290 | Msa0521530 | 0.812171 | 4.847661e-51 | -8.615850e-47 |
| Msa0021290 | Msa0573550 | 0.852743 | 3.778234e-61 | -8.615850e-47 |
| Msa0021290 | Msa0582070 | 0.844364 | 7.915013e-59 | -8.615850e-47 |
| Msa0021290 | Msa0597240 | 0.801814 | 7.537721e-49 | -8.615850e-47 |
| Msa0021290 | Msa0622230 | 0.801882 | 7.299171e-49 | -8.615850e-47 |
| Msa0021290 | Msa0630440 | 0.815828 | 7.567214e-52 | -8.615850e-47 |
| Msa0021290 | Msa0653060 | 0.804996 | 1.652110e-49 | -8.615850e-47 |
| Msa0021290 | Msa0656320 | 0.835664 | 1.471198e-56 | -8.615850e-47 |
| Msa0021290 | Msa0689830 | 0.841811 | 3.788402e-58 | -8.615850e-47 |
| Msa0021290 | Msa0700120 | 0.839167 | 1.862658e-57 | -8.615850e-47 |
| Msa0021290 | Msa0701890 | 0.809741 | 1.628488e-50 | -8.615850e-47 |
| Msa0021290 | Msa0708630 | 0.841108 | 5.802429e-58 | -8.615850e-47 |
| Msa0021290 | Msa0790450 | 0.831476 | 1.633828e-55 | -8.615850e-47 |
| Msa0021290 | Msa0838070 | 0.801462 | 8.903728e-49 | -8.615850e-47 |
| Msa0021290 | Msa0846900 | 0.824009 | 1.018265e-53 | -8.615850e-47 |
| Msa0021290 | Msa0861320 | 0.842046 | 3.283092e-58 | -8.615850e-47 |
| Msa0021290 | Msa0880050 | 0.807185 | 5.719730e-50 | -8.615850e-47 |
| Msa0021290 | Msa0891700 | 0.820493 | 6.661447e-53 | -8.615850e-47 |
| Msa0021290 | Msa0929700 | 0.835525 | 1.595122e-56 | -8.615850e-47 |
| Msa0021290 | Msa0930100 | 0.806127 | 9.566527e-50 | -8.615850e-47 |
| Msa0021290 | Msa0930790 | 0.810041 | 1.403712e-50 | -8.615850e-47 |
| Msa0021290 | Msa0966120 | 0.803240 | 3.830644e-49 | -8.615850e-47 |
| Msa0021290 | Msa0991630 | 0.802198 | 6.287249e-49 | -8.615850e-47 |
| Msa0021290 | Msa1001620 | 0.836787 | 7.623740e-57 | -8.615850e-47 |
| Msa0021290 | Msa1019180 | 0.824737 | 6.864366e-54 | -8.615850e-47 |
| Msa0021290 | Msa1025200 | 0.830162 | 3.429184e-55 | -8.615850e-47 |
| Msa0021290 | Msa1025220 | 0.826702 | 2.346728e-54 | -8.615850e-47 |
| Msa0021290 | Msa1026710 | 0.802472 | 5.520807e-49 | -8.615850e-47 |
| Msa0021290 | Msa1040160 | 0.805428 | 1.341497e-49 | -8.615850e-47 |
| Msa0021290 | Msa1041680 | 0.810497 | 1.119290e-50 | -8.615850e-47 |
| Msa0021290 | Msa1047020 | 0.805686 | 1.184194e-49 | -8.615850e-47 |
| Msa0021290 | Msa1050100 | 0.820316 | 7.317174e-53 | -8.615850e-47 |
| Msa0021290 | Msa1050260 | 0.823096 | 1.665040e-53 | -8.615850e-47 |
| Msa0021290 | Msa1083370 | 0.803012 | 4.270480e-49 | -8.615850e-47 |
| Msa0021290 | Msa1091290 | 0.814054 | 1.873110e-51 | -8.615850e-47 |
| Msa0021290 | Msa1104110 | 0.818613 | 1.788986e-52 | -8.615850e-47 |
| Msa0021290 | Msa1124210 | 0.858137 | 1.012896e-62 | -8.615850e-47 |
| Msa0021290 | Msa1126690 | 0.805788 | 1.127192e-49 | -8.615850e-47 |
| Msa0021290 | Msa1147700 | 0.841182 | 5.547298e-58 | -8.615850e-47 |
| Msa0021290 | Msa1156830 | 0.821126 | 4.766096e-53 | -8.615850e-47 |
| Msa0021290 | Msa1166570 | 0.806554 | 7.776266e-50 | -8.615850e-47 |
| Msa0021290 | Msa1166670 | 0.813913 | 2.012201e-51 | -8.615850e-47 |
| Msa0021290 | Msa1167360 | 0.810231 | 1.277298e-50 | -8.615850e-47 |
| Msa0021290 | Msa1203560 | 0.812828 | 3.482914e-51 | -8.615850e-47 |
| Msa0021290 | Msa1218610 | 0.848672 | 5.277918e-60 | -8.615850e-47 |
| Msa0021290 | Msa1220580 | 0.834714 | 2.554926e-56 | -8.615850e-47 |
| Msa0021290 | Msa1226370 | 0.809936 | 1.478657e-50 | -8.615850e-47 |
| Msa0021290 | Msa1237040 | 0.819026 | 1.441650e-52 | -8.615850e-47 |
| Msa0021290 | Msa1255850 | 0.826410 | 2.754129e-54 | -8.615850e-47 |
| Msa0021290 | Msa1258460 | 0.813830 | 2.098894e-51 | -8.615850e-47 |
| Msa0021290 | Msa1284060 | 0.822473 | 2.324553e-53 | -8.615850e-47 |
| Msa0021290 | Msa1296090 | 0.807919 | 3.994490e-50 | -8.615850e-47 |
| Msa0021290 | Msa1334560 | 0.844146 | 9.056703e-59 | -8.615850e-47 |
| Msa0021290 | Msa1347430 | 0.805948 | 1.043230e-49 | -8.615850e-47 |
| Msa0021290 | Msa1363910 | 0.807259 | 5.516122e-50 | -8.615850e-47 |
| Msa0021290 | Msa1364110 | 0.827083 | 1.902978e-54 | -8.615850e-47 |
| Msa0021290 | Msa1388890 | 0.813080 | 3.067089e-51 | -8.615850e-47 |
| Msa0021290 | Msa1395050 | 0.809663 | 1.693092e-50 | -8.615850e-47 |
| Msa0021290 | Msa1402010 | 0.859466 | 4.056687e-63 | -8.615850e-47 |
| Msa0021290 | Msa1423050 | 0.806382 | 8.450793e-50 | -8.615850e-47 |
| Msa0021290 | Msa1447120 | 0.806504 | 7.966110e-50 | -8.615850e-47 |
| Msa0021290 | Msa1449160 | 0.847581 | 1.056665e-59 | -8.615850e-47 |
| Msa0021290 | Msa1449920 | 0.807061 | 6.076313e-50 | -8.615850e-47 |
| Msa0021290 | Msa1450560 | 0.834703 | 2.571755e-56 | -8.615850e-47 |
| Msa0021290 | Msa1458000 | 0.812835 | 3.471674e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0021290 | MtrunA17_Chr1g0201251 | 98.190 | 221 | 4 | 0 | 1 | 221 | 1 | 221 | 1.57e-159 | 439 |
| Msa0021290 | MtrunA17_Chr6g0466891 | 76.959 | 217 | 48 | 2 | 5 | 221 | 6 | 220 | 8.16e-108 | 309 |
| Msa0021290 | MtrunA17_Chr3g0090241 | 96.241 | 133 | 5 | 0 | 1 | 133 | 1 | 133 | 1.09e-92 | 268 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0021290 | AT2G30060.1 | 73.958 | 192 | 46 | 3 | 5 | 195 | 11 | 199 | 1.25e-98 | 286 |
| Msa0021290 | AT1G07140.1 | 77.011 | 174 | 38 | 2 | 5 | 177 | 9 | 181 | 9.67e-95 | 276 |
| Msa0021290 | AT5G58590.1 | 71.585 | 183 | 49 | 2 | 2 | 182 | 4 | 185 | 9.32e-94 | 273 |
Find 87 sgRNAs with CRISPR-Local
Find 185 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTGAACTGGTTGAGCTTT+TGG | 0.118236 | 1_1:+37732459 | Msa0021290:three_prime_UTR |
| CCTGGTCATCCACTTGCTTC+TGG | 0.122899 | 1_1:-37732071 | None:intergenic |
| TTTGTTTGAGTTTCATATTT+TGG | 0.298184 | 1_1:+37732593 | Msa0021290:three_prime_UTR |
| TTCTTGAAGCATAAGGTTAC+TGG | 0.300353 | 1_1:+37730154 | Msa0021290:CDS |
| ATGACAAATATCCAAAGATA+TGG | 0.307954 | 1_1:-37732329 | None:intergenic |
| CTGGTCATCCACTTGCTTCT+GGG | 0.319820 | 1_1:-37732070 | None:intergenic |
| TCTGGGACTCGGCAACTTCT+TGG | 0.320249 | 1_1:-37732053 | None:intergenic |
| CTCTTCCTCTTCGCGATGCT+CGG | 0.323469 | 1_1:-37729868 | None:intergenic |
| TGGTGTCTAGTGCTGTATAT+AGG | 0.328827 | 1_1:-37729726 | None:intergenic |
| GGCCAAAGTCACACAGGCTT+TGG | 0.347742 | 1_1:+37732564 | Msa0021290:three_prime_UTR |
| CGGTAGTGACGGCAACTTCT+TGG | 0.369183 | 1_1:-37729950 | None:intergenic |
| TTGATGTGTGTTTGGTGAAT+AGG | 0.371499 | 1_1:+37732666 | Msa0021290:three_prime_UTR |
| ATTTCAGTTTGATGTGTGTT+TGG | 0.384883 | 1_1:+37732658 | Msa0021290:three_prime_UTR |
| TGATGTGTGTTTGGTGAATA+GGG | 0.385414 | 1_1:+37732667 | Msa0021290:three_prime_UTR |
| GTCAGATTGCAAAAGCTTCA+TGG | 0.394229 | 1_1:+37732023 | Msa0021290:intron |
| CTTGTTAAATGAGAAGCAAA+TGG | 0.394607 | 1_1:+37732705 | Msa0021290:three_prime_UTR |
| ATAAGGTTACTGGAAAAGTT+AGG | 0.398775 | 1_1:+37730164 | Msa0021290:CDS |
| ATCTGCATCAGAGGCAAGTA+AGG | 0.399130 | 1_1:+37732203 | Msa0021290:CDS |
| AAATACTCACTTTCAATTGA+AGG | 0.401142 | 1_1:-37730452 | None:intergenic |
| GAGAAGTCTGAGGAAAATAC+TGG | 0.417035 | 1_1:+37732171 | Msa0021290:CDS |
| AATCTTGTGTTTGGCATGCT+AGG | 0.433624 | 1_1:+37730381 | Msa0021290:CDS |
| CGTGAAGTTCTTGAAGCATA+AGG | 0.437022 | 1_1:+37730147 | Msa0021290:CDS |
| TGTCATACTTAATAGTCGTC+AGG | 0.451678 | 1_1:+37732346 | Msa0021290:three_prime_UTR |
| GGAATGAGAAATCTTGTGTT+TGG | 0.452376 | 1_1:+37730372 | Msa0021290:CDS |
| AATTCTCAAGCAGGGGATGC+AGG | 0.455121 | 1_1:-37732252 | None:intergenic |
| GATTTCCATCCTTATCGAAT+CGG | 0.464257 | 1_1:-37730099 | None:intergenic |
| GAAAAGTTAGGCTTCTTATG+AGG | 0.468659 | 1_1:+37730176 | Msa0021290:CDS |
| TCTTCGTCATCGCCGACTGC+GGG | 0.470554 | 1_1:-37729894 | None:intergenic |
| TCTTCCTCTTCGCGATGCTC+GGG | 0.472590 | 1_1:-37729867 | None:intergenic |
| ATCCACTTGCTTCTGGGACT+CGG | 0.478524 | 1_1:-37732064 | None:intergenic |
| CAGTGGAAGGAGAGAGGTGC+TGG | 0.478698 | 1_1:+37730121 | Msa0021290:CDS |
| TCAGCACAAGAAGCAAAACT+AGG | 0.482343 | 1_1:+37732416 | Msa0021290:three_prime_UTR |
| GGTGTCTAGTGCTGTATATA+GGG | 0.483569 | 1_1:-37729725 | None:intergenic |
| GTCTTCTTCACCGGTAGTGA+CGG | 0.483775 | 1_1:-37729961 | None:intergenic |
| ATCCAAAGCCTGTGTGACTT+TGG | 0.486436 | 1_1:-37732566 | None:intergenic |
| GATCGGTGCGACTTGTGCTC+CGG | 0.487608 | 1_1:-37729919 | None:intergenic |
| GAAGCTTTACCGATTCGATA+AGG | 0.487615 | 1_1:+37730090 | Msa0021290:CDS |
| GAGTGAGTGAGAGTGGAGTT+TGG | 0.488118 | 1_1:-37729746 | None:intergenic |
| TGACAAATATCCAAAGATAT+GGG | 0.488571 | 1_1:-37732328 | None:intergenic |
| ATCTTGTGTTTGGCATGCTA+GGG | 0.490304 | 1_1:+37730382 | Msa0021290:CDS |
| ACAAGAAGCAAAACTAGGGT+TGG | 0.494474 | 1_1:+37732421 | Msa0021290:three_prime_UTR |
| CAAGAAGCAAAACTAGGGTT+GGG | 0.501256 | 1_1:+37732422 | Msa0021290:three_prime_UTR |
| AAGTAATGAGTCATGTTGAT+TGG | 0.503656 | 1_1:+37732523 | Msa0021290:three_prime_UTR |
| TGGGAGGGTGCAGTCGAGAA+TGG | 0.504436 | 1_1:+37732543 | Msa0021290:three_prime_UTR |
| CTTTACCGATTCGATAAGGA+TGG | 0.510393 | 1_1:+37730094 | Msa0021290:CDS |
| TGAATAAAGAATTCTCAAGC+AGG | 0.511378 | 1_1:-37732261 | None:intergenic |
| CAAGAAGTTGCCGTCACTAC+CGG | 0.512188 | 1_1:+37729951 | Msa0021290:CDS |
| ATGAGTGTTCAAGAGCATGC+TGG | 0.514351 | 1_1:+37730350 | Msa0021290:CDS |
| CAGCTGCTGCAGATGCATCC+TGG | 0.517045 | 1_1:-37732089 | None:intergenic |
| TTGTTAAATGAGAAGCAAAT+GGG | 0.518817 | 1_1:+37732706 | Msa0021290:three_prime_UTR |
| TGACGGCAACTTCTTGGAGT+TGG | 0.520212 | 1_1:-37729944 | None:intergenic |
| CGAGCATCGCGAAGAGGAAG+AGG | 0.522265 | 1_1:+37729869 | Msa0021290:CDS |
| CCAGAAGCAAGTGGATGACC+AGG | 0.523643 | 1_1:+37732071 | Msa0021290:CDS |
| AAGTACGTACAGATCTAGAA+TGG | 0.525138 | 1_1:-37729991 | None:intergenic |
| TGAATTTCGAGACTTTGAAC+TGG | 0.527338 | 1_1:+37732447 | Msa0021290:three_prime_UTR |
| GGGTTTGAAGTAGTGCCGCT+AGG | 0.531376 | 1_1:-37729805 | None:intergenic |
| GAAAGATGAAGAGAAGTCTG+AGG | 0.533608 | 1_1:+37732161 | Msa0021290:CDS |
| AGTAATGAGTCATGTTGATT+GGG | 0.536429 | 1_1:+37732524 | Msa0021290:three_prime_UTR |
| GGATTCTTCGTCTTCTTCAC+CGG | 0.538126 | 1_1:-37729970 | None:intergenic |
| CTTATGCTTCAAGAACTTCA+CGG | 0.538532 | 1_1:-37730146 | None:intergenic |
| GGTTTGAAGTAGTGCCGCTA+GGG | 0.539619 | 1_1:-37729804 | None:intergenic |
| TGAGTGTTCAAGAGCATGCT+GGG | 0.540023 | 1_1:+37730351 | Msa0021290:CDS |
| CTCTTCGCGATGCTCGGGAT+CGG | 0.540801 | 1_1:-37729862 | None:intergenic |
| TAGTGCTGTATATAGGGATG+TGG | 0.541878 | 1_1:-37729719 | None:intergenic |
| GTAATGTGAGTGAGTGAGAG+TGG | 0.542364 | 1_1:-37729753 | None:intergenic |
| GTCTTCGTCATCGCCGACTG+CGG | 0.543477 | 1_1:-37729895 | None:intergenic |
| GAGGAAGAGGCACCCGCAGT+CGG | 0.563080 | 1_1:+37729882 | Msa0021290:CDS |
| TATGCAATCTGACAAGGTTG+TGG | 0.565003 | 1_1:+37732290 | Msa0021290:three_prime_UTR |
| AGTGCTGTATATAGGGATGT+GGG | 0.593014 | 1_1:-37729718 | None:intergenic |
| TGCCGAGTCCCAGAAGCAAG+TGG | 0.595405 | 1_1:+37732062 | Msa0021290:CDS |
| ACTTCTTGGAGTTGGACGAT+CGG | 0.600044 | 1_1:-37729936 | None:intergenic |
| CAGCACAAGAAGCAAAACTA+GGG | 0.609020 | 1_1:+37732417 | Msa0021290:three_prime_UTR |
| TACTACTATGCAATCTGACA+AGG | 0.609776 | 1_1:+37732284 | Msa0021290:three_prime_UTR |
| GAATAAAGAATTCTCAAGCA+GGG | 0.611131 | 1_1:-37732260 | None:intergenic |
| CGATCCCGAGCATCGCGAAG+AGG | 0.616973 | 1_1:+37729863 | Msa0021290:CDS |
| GGAAATCAGTGGAAGGAGAG+AGG | 0.619212 | 1_1:+37730115 | Msa0021290:CDS |
| AGAGAAAGAATCTGCATCAG+AGG | 0.627135 | 1_1:+37732194 | Msa0021290:CDS |
| AATAAAGAATTCTCAAGCAG+GGG | 0.633556 | 1_1:-37732259 | None:intergenic |
| AATGAGTCATGTTGATTGGG+AGG | 0.634652 | 1_1:+37732527 | Msa0021290:three_prime_UTR |
| TAAGGATGGAAATCAGTGGA+AGG | 0.638920 | 1_1:+37730108 | Msa0021290:CDS |
| TCGATAAGGATGGAAATCAG+TGG | 0.649034 | 1_1:+37730104 | Msa0021290:CDS |
| GTCGGCGATGACGAAGACAC+CGG | 0.668768 | 1_1:+37729900 | Msa0021290:CDS |
| TGCTCTTGAACACTCATCGT+AGG | 0.669816 | 1_1:-37730344 | None:intergenic |
| GAAATTGACTGTTGAAGACA+AGG | 0.670832 | 1_1:+37732122 | Msa0021290:CDS |
| GAGAATGGCCAAAGTCACAC+AGG | 0.676588 | 1_1:+37732558 | Msa0021290:three_prime_UTR |
| ATGAGTCATGTTGATTGGGA+GGG | 0.677551 | 1_1:+37732528 | Msa0021290:three_prime_UTR |
| TTTGGTGAATAGGGAAACTG+CGG | 0.755211 | 1_1:+37732676 | Msa0021290:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGTAATGTTATATAATCTT+AGG | + | chr1_1:37730854-37730873 | Msa0021290:intron | 15.0% |
| !! | AAATAAAACCCTAAAATCAA+AGG | - | chr1_1:37730033-37730052 | None:intergenic | 20.0% |
| !! | GGCATATTATAATATAGTTA+AGG | + | chr1_1:37730875-37730894 | Msa0021290:intron | 20.0% |
| !!! | AACAAAATTGATTTATCGTA+TGG | - | chr1_1:37731034-37731053 | None:intergenic | 20.0% |
| !!! | GAATTTCATATTTAAAGTTG+AGG | - | chr1_1:37731166-37731185 | None:intergenic | 20.0% |
| !!! | TTTTAAGCATTTTATATGAC+TGG | + | chr1_1:37731216-37731235 | Msa0021290:intron | 20.0% |
| !!! | TTTAAGCATTTTATATGACT+GGG | + | chr1_1:37731217-37731236 | Msa0021290:intron | 20.0% |
| !! | TAAATAAAGTTGTTTGACTA+AGG | - | chr1_1:37731296-37731315 | None:intergenic | 20.0% |
| !! | TTTAATTCACCTTATTGTAA+AGG | + | chr1_1:37731769-37731788 | Msa0021290:intron | 20.0% |
| !!! | TTTGTTTGAGTTTCATATTT+TGG | + | chr1_1:37732593-37732612 | Msa0021290:three_prime_UTR | 20.0% |
| !!! | TTTTGGTTAACATTCATTTT+TGG | + | chr1_1:37732610-37732629 | Msa0021290:three_prime_UTR | 20.0% |
| !!! | CTTTTTCACCTTTGATTTTA+GGG | + | chr1_1:37730022-37730041 | Msa0021290:intron | 25.0% |
| ! | AAATACTCACTTTCAATTGA+AGG | - | chr1_1:37730455-37730474 | None:intergenic | 25.0% |
| !! | TTTTCATAGTTAGATGAAGT+TGG | + | chr1_1:37730532-37730551 | Msa0021290:intron | 25.0% |
| ! | TTTCTGTTTCGTAATTGATA+TGG | + | chr1_1:37730587-37730606 | Msa0021290:intron | 25.0% |
| !! | TTGTGTTATTAGTCAAATGA+TGG | + | chr1_1:37730646-37730665 | Msa0021290:intron | 25.0% |
| ! | AGATAATTGAAAACTTTGCA+AGG | - | chr1_1:37730826-37730845 | None:intergenic | 25.0% |
| !!! | AATTAAGTTGAAGAAAGTAC+AGG | + | chr1_1:37731125-37731144 | Msa0021290:intron | 25.0% |
| !!! | ATTAAGTTGAAGAAAGTACA+GGG | + | chr1_1:37731126-37731145 | Msa0021290:intron | 25.0% |
| ! | ACATAGTTGAAATAAATCGT+TGG | + | chr1_1:37731660-37731679 | Msa0021290:intron | 25.0% |
| ! | TGACAAATATCCAAAGATAT+GGG | - | chr1_1:37732331-37732350 | None:intergenic | 25.0% |
| ! | ATGACAAATATCCAAAGATA+TGG | - | chr1_1:37732332-37732351 | None:intergenic | 25.0% |
| ! | TTGTTAAATGAGAAGCAAAT+GGG | + | chr1_1:37732706-37732725 | Msa0021290:three_prime_UTR | 25.0% |
| CCTAAAATCAAAGGTGAAAA+AGG | - | chr1_1:37730024-37730043 | None:intergenic | 30.0% | |
| !! | CCTTTTTCACCTTTGATTTT+AGG | + | chr1_1:37730021-37730040 | Msa0021290:intron | 30.0% |
| ATAAGGTTACTGGAAAAGTT+AGG | + | chr1_1:37730164-37730183 | Msa0021290:CDS | 30.0% | |
| !!! | TTTTGAGTTTGAGATTGTTG+TGG | + | chr1_1:37730298-37730317 | Msa0021290:intron | 30.0% |
| ATAATTCCGAGTTCAAATTG+GGG | - | chr1_1:37730700-37730719 | None:intergenic | 30.0% | |
| GATAATTCCGAGTTCAAATT+GGG | - | chr1_1:37730701-37730720 | None:intergenic | 30.0% | |
| AGATAATTCCGAGTTCAAAT+TGG | - | chr1_1:37730702-37730721 | None:intergenic | 30.0% | |
| ACAATATAGTCGAGTAAACA+AGG | - | chr1_1:37730909-37730928 | None:intergenic | 30.0% | |
| TTGCGTTTGTAAGATTGTAT+GGG | + | chr1_1:37730933-37730952 | Msa0021290:intron | 30.0% | |
| ! | AGAAAGTACAGGGTATAATT+TGG | + | chr1_1:37731136-37731155 | Msa0021290:intron | 30.0% |
| TTAATTGTGCCATCATATCA+CGG | - | chr1_1:37731487-37731506 | None:intergenic | 30.0% | |
| TGAGTTATCTATCATATGCT+AGG | - | chr1_1:37731515-37731534 | None:intergenic | 30.0% | |
| !!! | TTCATTTTTTCACTGTGCAA+TGG | + | chr1_1:37731551-37731570 | Msa0021290:intron | 30.0% |
| ! | TTGGAAGAGTTGAAACATTT+TGG | - | chr1_1:37731853-37731872 | None:intergenic | 30.0% |
| TGGTAAGTTTACACAGAATA+TGG | - | chr1_1:37731994-37732013 | None:intergenic | 30.0% | |
| AATAAAGAATTCTCAAGCAG+GGG | - | chr1_1:37732262-37732281 | None:intergenic | 30.0% | |
| GAATAAAGAATTCTCAAGCA+GGG | - | chr1_1:37732263-37732282 | None:intergenic | 30.0% | |
| TGAATAAAGAATTCTCAAGC+AGG | - | chr1_1:37732264-37732283 | None:intergenic | 30.0% | |
| AAGTAATGAGTCATGTTGAT+TGG | + | chr1_1:37732523-37732542 | Msa0021290:three_prime_UTR | 30.0% | |
| ! | AGTAATGAGTCATGTTGATT+GGG | + | chr1_1:37732524-37732543 | Msa0021290:three_prime_UTR | 30.0% |
| ATTTCAGTTTGATGTGTGTT+TGG | + | chr1_1:37732658-37732677 | Msa0021290:three_prime_UTR | 30.0% | |
| CTTGTTAAATGAGAAGCAAA+TGG | + | chr1_1:37732705-37732724 | Msa0021290:three_prime_UTR | 30.0% | |
| !! | AAAAAGCGTTGGGAATCTTT+GGG | - | chr1_1:37729781-37729800 | None:intergenic | 35.0% |
| !! | TAAAAAGCGTTGGGAATCTT+TGG | - | chr1_1:37729782-37729801 | None:intergenic | 35.0% |
| AAGTACGTACAGATCTAGAA+TGG | - | chr1_1:37729994-37730013 | None:intergenic | 35.0% | |
| GATTTCCATCCTTATCGAAT+CGG | - | chr1_1:37730102-37730121 | None:intergenic | 35.0% | |
| CTTATGCTTCAAGAACTTCA+CGG | - | chr1_1:37730149-37730168 | None:intergenic | 35.0% | |
| TTCTTGAAGCATAAGGTTAC+TGG | + | chr1_1:37730154-37730173 | Msa0021290:CDS | 35.0% | |
| GAAAAGTTAGGCTTCTTATG+AGG | + | chr1_1:37730176-37730195 | Msa0021290:CDS | 35.0% | |
| GGAATGAGAAATCTTGTGTT+TGG | + | chr1_1:37730372-37730391 | Msa0021290:CDS | 35.0% | |
| !! | TTTTGCTGATGGTGAACTTA+AGG | + | chr1_1:37730406-37730425 | Msa0021290:CDS | 35.0% |
| ! | GCTGCATTTTGTAGATGATT+TGG | + | chr1_1:37730483-37730502 | Msa0021290:intron | 35.0% |
| ACACAAAACATGACAGCATT+GGG | - | chr1_1:37730513-37730532 | None:intergenic | 35.0% | |
| AACACAAAACATGACAGCAT+TGG | - | chr1_1:37730514-37730533 | None:intergenic | 35.0% | |
| CTGTTTCGTAATTGATATGG+TGG | + | chr1_1:37730590-37730609 | Msa0021290:intron | 35.0% | |
| TAATTCCGAGTTCAAATTGG+GGG | - | chr1_1:37730699-37730718 | None:intergenic | 35.0% | |
| ACACAAATCCTCATGTTTCA+GGG | - | chr1_1:37730754-37730773 | None:intergenic | 35.0% | |
| CTTGCGTTTGTAAGATTGTA+TGG | + | chr1_1:37730932-37730951 | Msa0021290:intron | 35.0% | |
| CAAACATCAAAATGAACAGC+AGG | - | chr1_1:37730995-37731014 | None:intergenic | 35.0% | |
| !! | CTGCTGTTCATTTTGATGTT+TGG | + | chr1_1:37730993-37731012 | Msa0021290:intron | 35.0% |
| TAGATATCTAGACATGCTTC+TGG | + | chr1_1:37731079-37731098 | Msa0021290:intron | 35.0% | |
| TTATATGACTGGGTCATAGT+AGG | + | chr1_1:37731227-37731246 | Msa0021290:intron | 35.0% | |
| TCACTGCATATCATATGTGA+TGG | + | chr1_1:37731416-37731435 | Msa0021290:intron | 35.0% | |
| ! | ACTTTTACCTGTTTGCATGT+TGG | + | chr1_1:37731726-37731745 | Msa0021290:intron | 35.0% |
| AGAACTACTCCTATATACTC+CGG | - | chr1_1:37731930-37731949 | None:intergenic | 35.0% | |
| GAAATTGACTGTTGAAGACA+AGG | + | chr1_1:37732122-37732141 | Msa0021290:CDS | 35.0% | |
| TACTACTATGCAATCTGACA+AGG | + | chr1_1:37732284-37732303 | Msa0021290:three_prime_UTR | 35.0% | |
| ! | GTTTTTACAGCCCATATCTT+TGG | + | chr1_1:37732318-37732337 | Msa0021290:three_prime_UTR | 35.0% |
| TGTCATACTTAATAGTCGTC+AGG | + | chr1_1:37732346-37732365 | Msa0021290:three_prime_UTR | 35.0% | |
| ! | TGTGCTGACAAAAACACAAA+AGG | - | chr1_1:37732404-37732423 | None:intergenic | 35.0% |
| TGAATTTCGAGACTTTGAAC+TGG | + | chr1_1:37732447-37732466 | Msa0021290:three_prime_UTR | 35.0% | |
| ! | TTTGAACTGGTTGAGCTTTT+GGG | + | chr1_1:37732460-37732479 | Msa0021290:three_prime_UTR | 35.0% |
| ! | TTGATGTGTGTTTGGTGAAT+AGG | + | chr1_1:37732666-37732685 | Msa0021290:three_prime_UTR | 35.0% |
| ! | TGATGTGTGTTTGGTGAATA+GGG | + | chr1_1:37732667-37732686 | Msa0021290:three_prime_UTR | 35.0% |
| AGTGCTGTATATAGGGATGT+GGG | - | chr1_1:37729721-37729740 | None:intergenic | 40.0% | |
| TAGTGCTGTATATAGGGATG+TGG | - | chr1_1:37729722-37729741 | None:intergenic | 40.0% | |
| GGTGTCTAGTGCTGTATATA+GGG | - | chr1_1:37729728-37729747 | None:intergenic | 40.0% | |
| TGGTGTCTAGTGCTGTATAT+AGG | - | chr1_1:37729729-37729748 | None:intergenic | 40.0% | |
| !! | GCTAGGGTTTAAAAAGCGTT+GGG | - | chr1_1:37729791-37729810 | None:intergenic | 40.0% |
| !! | CAACGCTTTTTAAACCCTAG+CGG | + | chr1_1:37729790-37729809 | Msa0021290:five_prime_UTR | 40.0% |
| !! | GAAGCTTTACCGATTCGATA+AGG | + | chr1_1:37730090-37730109 | Msa0021290:CDS | 40.0% |
| !! | CTTTACCGATTCGATAAGGA+TGG | + | chr1_1:37730094-37730113 | Msa0021290:CDS | 40.0% |
| TCGATAAGGATGGAAATCAG+TGG | + | chr1_1:37730104-37730123 | Msa0021290:CDS | 40.0% | |
| TAAGGATGGAAATCAGTGGA+AGG | + | chr1_1:37730108-37730127 | Msa0021290:CDS | 40.0% | |
| CGTGAAGTTCTTGAAGCATA+AGG | + | chr1_1:37730147-37730166 | Msa0021290:CDS | 40.0% | |
| AATCTTGTGTTTGGCATGCT+AGG | + | chr1_1:37730381-37730400 | Msa0021290:CDS | 40.0% | |
| ATCTTGTGTTTGGCATGCTA+GGG | + | chr1_1:37730382-37730401 | Msa0021290:CDS | 40.0% | |
| AATTCCGAGTTCAAATTGGG+GGG | - | chr1_1:37730698-37730717 | None:intergenic | 40.0% | |
| CACACAAATCCTCATGTTTC+AGG | - | chr1_1:37730755-37730774 | None:intergenic | 40.0% | |
| GCATAGATCTCAAGCAACTT+CGG | - | chr1_1:37730792-37730811 | None:intergenic | 40.0% | |
| ! | TTTTGTTACGCAGCGTCATT+TGG | + | chr1_1:37731047-37731066 | Msa0021290:intron | 40.0% |
| ! | AGCTTTTTAACCAGCCCTTA+CGG | + | chr1_1:37731387-37731406 | Msa0021290:intron | 40.0% |
| TGCAGTGATCAAATCCGTAA+GGG | - | chr1_1:37731404-37731423 | None:intergenic | 40.0% | |
| ATGCAGTGATCAAATCCGTA+AGG | - | chr1_1:37731405-37731424 | None:intergenic | 40.0% | |
| TTACCTGTTTGCATGTTGGA+TGG | + | chr1_1:37731730-37731749 | Msa0021290:intron | 40.0% | |
| TTTCCATCCAACATGCAAAC+AGG | - | chr1_1:37731736-37731755 | None:intergenic | 40.0% | |
| AGGGGGTAACCTTTACAATA+AGG | - | chr1_1:37731781-37731800 | None:intergenic | 40.0% | |
| ATCCTTGAAACTGAAGTGGA+GGG | - | chr1_1:37731800-37731819 | None:intergenic | 40.0% | |
| AATCCTTGAAACTGAAGTGG+AGG | - | chr1_1:37731801-37731820 | None:intergenic | 40.0% | |
| CTGAATCCTTGAAACTGAAG+TGG | - | chr1_1:37731804-37731823 | None:intergenic | 40.0% | |
| !! | CAGACTATGCAGTGGATTAT+TGG | - | chr1_1:37731872-37731891 | None:intergenic | 40.0% |
| ! | AATCATCTGCATGTGCTGTT+TGG | + | chr1_1:37731904-37731923 | Msa0021290:intron | 40.0% |
| TGCAATCTGACACACAGAAA+TGG | - | chr1_1:37732014-37732033 | None:intergenic | 40.0% | |
| GTCAGATTGCAAAAGCTTCA+TGG | + | chr1_1:37732023-37732042 | Msa0021290:intron | 40.0% | |
| GAAAGATGAAGAGAAGTCTG+AGG | + | chr1_1:37732161-37732180 | Msa0021290:CDS | 40.0% | |
| GAGAAGTCTGAGGAAAATAC+TGG | + | chr1_1:37732171-37732190 | Msa0021290:CDS | 40.0% | |
| AGAGAAAGAATCTGCATCAG+AGG | + | chr1_1:37732194-37732213 | Msa0021290:CDS | 40.0% | |
| TATGCAATCTGACAAGGTTG+TGG | + | chr1_1:37732290-37732309 | Msa0021290:three_prime_UTR | 40.0% | |
| TCAGCACAAGAAGCAAAACT+AGG | + | chr1_1:37732416-37732435 | Msa0021290:three_prime_UTR | 40.0% | |
| CAGCACAAGAAGCAAAACTA+GGG | + | chr1_1:37732417-37732436 | Msa0021290:three_prime_UTR | 40.0% | |
| ACAAGAAGCAAAACTAGGGT+TGG | + | chr1_1:37732421-37732440 | Msa0021290:three_prime_UTR | 40.0% | |
| CAAGAAGCAAAACTAGGGTT+GGG | + | chr1_1:37732422-37732441 | Msa0021290:three_prime_UTR | 40.0% | |
| ! | CTTTGAACTGGTTGAGCTTT+TGG | + | chr1_1:37732459-37732478 | Msa0021290:three_prime_UTR | 40.0% |
| ! | TTGAACTGGTTGAGCTTTTG+GGG | + | chr1_1:37732461-37732480 | Msa0021290:three_prime_UTR | 40.0% |
| ! | AATGAGTCATGTTGATTGGG+AGG | + | chr1_1:37732527-37732546 | Msa0021290:three_prime_UTR | 40.0% |
| ! | ATGAGTCATGTTGATTGGGA+GGG | + | chr1_1:37732528-37732547 | Msa0021290:three_prime_UTR | 40.0% |
| TTTGGTGAATAGGGAAACTG+CGG | + | chr1_1:37732676-37732695 | Msa0021290:three_prime_UTR | 40.0% | |
| GTAATGTGAGTGAGTGAGAG+TGG | - | chr1_1:37729756-37729775 | None:intergenic | 45.0% | |
| ! | CGCTAGGGTTTAAAAAGCGT+TGG | - | chr1_1:37729792-37729811 | None:intergenic | 45.0% |
| !! | CTCTCTCTCTCTCTAGAACA+TGG | + | chr1_1:37729839-37729858 | Msa0021290:exon | 45.0% |
| ACTTCTTGGAGTTGGACGAT+CGG | - | chr1_1:37729939-37729958 | None:intergenic | 45.0% | |
| GGATTCTTCGTCTTCTTCAC+CGG | - | chr1_1:37729973-37729992 | None:intergenic | 45.0% | |
| !! | AAAGCTTCGATTTGCTGCGA+TGG | - | chr1_1:37730078-37730097 | None:intergenic | 45.0% |
| TGCTCTTGAACACTCATCGT+AGG | - | chr1_1:37730347-37730366 | None:intergenic | 45.0% | |
| ! | ATGAGTGTTCAAGAGCATGC+TGG | + | chr1_1:37730350-37730369 | Msa0021290:CDS | 45.0% |
| ! | TGAGTGTTCAAGAGCATGCT+GGG | + | chr1_1:37730351-37730370 | Msa0021290:CDS | 45.0% |
| ! | CATGCTAGGGATTTTGCTGA+TGG | + | chr1_1:37730395-37730414 | Msa0021290:CDS | 45.0% |
| TCGTATGGCAACTATGCAGA+AGG | - | chr1_1:37731019-37731038 | None:intergenic | 45.0% | |
| TTGTGCCATCATATCACGGA+CGG | - | chr1_1:37731483-37731502 | None:intergenic | 45.0% | |
| TCCTTGAAACTGAAGTGGAG+GGG | - | chr1_1:37731799-37731818 | None:intergenic | 45.0% | |
| AGATTGTGCAGACTATGCAG+TGG | - | chr1_1:37731880-37731899 | None:intergenic | 45.0% | |
| ATCTGCATCAGAGGCAAGTA+AGG | + | chr1_1:37732203-37732222 | Msa0021290:CDS | 45.0% | |
| ATCCAAAGCCTGTGTGACTT+TGG | - | chr1_1:37732569-37732588 | None:intergenic | 45.0% | |
| !!! | ATATTTAAAATCTTTTTAAT+AGG | + | chr1_1:37731193-37731212 | Msa0021290:intron | 5.0% |
| GAGTGAGTGAGAGTGGAGTT+TGG | - | chr1_1:37729749-37729768 | None:intergenic | 50.0% | |
| ! | GGTTTGAAGTAGTGCCGCTA+GGG | - | chr1_1:37729807-37729826 | None:intergenic | 50.0% |
| GAGAGAGAGAGAGAGAGAGA+GGG | - | chr1_1:37729828-37729847 | None:intergenic | 50.0% | |
| AGAGAGAGAGAGAGAGAGAG+AGG | - | chr1_1:37729827-37729846 | None:intergenic | 50.0% | |
| TGACGGCAACTTCTTGGAGT+TGG | - | chr1_1:37729947-37729966 | None:intergenic | 50.0% | |
| CAAGAAGTTGCCGTCACTAC+CGG | + | chr1_1:37729951-37729970 | Msa0021290:CDS | 50.0% | |
| GTCTTCTTCACCGGTAGTGA+CGG | - | chr1_1:37729964-37729983 | None:intergenic | 50.0% | |
| GGAAATCAGTGGAAGGAGAG+AGG | + | chr1_1:37730115-37730134 | Msa0021290:CDS | 50.0% | |
| GAGTTCAAATTGGGGGGAAC+GGG | - | chr1_1:37730692-37730711 | None:intergenic | 50.0% | |
| CGAGTTCAAATTGGGGGGAA+CGG | - | chr1_1:37730693-37730712 | None:intergenic | 50.0% | |
| CGTTCCCCCCAATTTGAACT+CGG | + | chr1_1:37730691-37730710 | Msa0021290:intron | 50.0% | |
| TCATGTTTCAGGGAGACGCT+AGG | - | chr1_1:37730744-37730763 | None:intergenic | 50.0% | |
| TAGCGTCTCCCTGAAACATG+AGG | + | chr1_1:37730743-37730762 | Msa0021290:intron | 50.0% | |
| GGTGTGATGACAGGTGAAAC+AGG | - | chr1_1:37730974-37730993 | None:intergenic | 50.0% | |
| TGAACAGCAGGTGTGATGAC+AGG | - | chr1_1:37730983-37731002 | None:intergenic | 50.0% | |
| ! | TACGCAGCGTCATTTGGTGA+AGG | + | chr1_1:37731053-37731072 | Msa0021290:intron | 50.0% |
| GTGATCAAATCCGTAAGGGC+TGG | - | chr1_1:37731400-37731419 | None:intergenic | 50.0% | |
| CCTTGAAACTGAAGTGGAGG+GGG | - | chr1_1:37731798-37731817 | None:intergenic | 50.0% | |
| !! | ATCTGCATGTGCTGTTTGGC+CGG | + | chr1_1:37731908-37731927 | Msa0021290:intron | 50.0% |
| GCTGTTTGGCCGGAGTATAT+AGG | + | chr1_1:37731918-37731937 | Msa0021290:intron | 50.0% | |
| !! | ATCCACTTGCTTCTGGGACT+CGG | - | chr1_1:37732067-37732086 | None:intergenic | 50.0% |
| CTGGTCATCCACTTGCTTCT+GGG | - | chr1_1:37732073-37732092 | None:intergenic | 50.0% | |
| AATTCTCAAGCAGGGGATGC+AGG | - | chr1_1:37732255-37732274 | None:intergenic | 50.0% | |
| !!! | TGGTTGAGCTTTTGGGGTCT+GGG | + | chr1_1:37732467-37732486 | Msa0021290:three_prime_UTR | 50.0% |
| GAGAATGGCCAAAGTCACAC+AGG | + | chr1_1:37732558-37732577 | Msa0021290:three_prime_UTR | 50.0% | |
| ! | GGGTTTGAAGTAGTGCCGCT+AGG | - | chr1_1:37729808-37729827 | None:intergenic | 55.0% |
| TCTTCCTCTTCGCGATGCTC+GGG | - | chr1_1:37729870-37729889 | None:intergenic | 55.0% | |
| CTCTTCCTCTTCGCGATGCT+CGG | - | chr1_1:37729871-37729890 | None:intergenic | 55.0% | |
| CGGTAGTGACGGCAACTTCT+TGG | - | chr1_1:37729953-37729972 | None:intergenic | 55.0% | |
| TCACGCCGTCCGTGATATGA+TGG | + | chr1_1:37731475-37731494 | Msa0021290:intron | 55.0% | |
| CCCCCTCCACTTCAGTTTCA+AGG | + | chr1_1:37731795-37731814 | Msa0021290:intron | 55.0% | |
| ! | TCTGGGACTCGGCAACTTCT+TGG | - | chr1_1:37732056-37732075 | None:intergenic | 55.0% |
| CCTGGTCATCCACTTGCTTC+TGG | - | chr1_1:37732074-37732093 | None:intergenic | 55.0% | |
| CCAGAAGCAAGTGGATGACC+AGG | + | chr1_1:37732071-37732090 | Msa0021290:CDS | 55.0% | |
| !!! | CTGGTTGAGCTTTTGGGGTC+TGG | + | chr1_1:37732466-37732485 | Msa0021290:three_prime_UTR | 55.0% |
| GGCCAAAGTCACACAGGCTT+TGG | + | chr1_1:37732564-37732583 | Msa0021290:three_prime_UTR | 55.0% | |
| CTCTTCGCGATGCTCGGGAT+CGG | - | chr1_1:37729865-37729884 | None:intergenic | 60.0% | |
| ! | CGAGCATCGCGAAGAGGAAG+AGG | + | chr1_1:37729869-37729888 | Msa0021290:CDS | 60.0% |
| ! | TCTTCGTCATCGCCGACTGC+GGG | - | chr1_1:37729897-37729916 | None:intergenic | 60.0% |
| ! | GTCTTCGTCATCGCCGACTG+CGG | - | chr1_1:37729898-37729917 | None:intergenic | 60.0% |
| GTCGGCGATGACGAAGACAC+CGG | + | chr1_1:37729900-37729919 | Msa0021290:CDS | 60.0% | |
| GATCGGTGCGACTTGTGCTC+CGG | - | chr1_1:37729922-37729941 | None:intergenic | 60.0% | |
| ! | CAGTGGAAGGAGAGAGGTGC+TGG | + | chr1_1:37730121-37730140 | Msa0021290:CDS | 60.0% |
| TGCCGAGTCCCAGAAGCAAG+TGG | + | chr1_1:37732062-37732081 | Msa0021290:CDS | 60.0% | |
| CAGCTGCTGCAGATGCATCC+TGG | - | chr1_1:37732092-37732111 | None:intergenic | 60.0% | |
| ! | TGGGAGGGTGCAGTCGAGAA+TGG | + | chr1_1:37732543-37732562 | Msa0021290:three_prime_UTR | 60.0% |
| ! | CGATCCCGAGCATCGCGAAG+AGG | + | chr1_1:37729863-37729882 | Msa0021290:CDS | 65.0% |
| !! | GAGGAAGAGGCACCCGCAGT+CGG | + | chr1_1:37729882-37729901 | Msa0021290:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 37729690 | 37732750 | 37729690 | ID=Msa0021290;Name=Msa0021290 |
| chr1_1 | mRNA | 37729690 | 37732750 | 37729690 | ID=Msa0021290-mRNA-1;Parent=Msa0021290;Name=Msa0021290-mRNA-1;_AED=0.09;_eAED=0.09;_QI=168|1|1|1|1|1|4|481|221 |
| chr1_1 | exon | 37729690 | 37730003 | 37729690 | ID=Msa0021290-mRNA-1:exon:11792;Parent=Msa0021290-mRNA-1 |
| chr1_1 | exon | 37730084 | 37730235 | 37730084 | ID=Msa0021290-mRNA-1:exon:11793;Parent=Msa0021290-mRNA-1 |
| chr1_1 | exon | 37730339 | 37730464 | 37730339 | ID=Msa0021290-mRNA-1:exon:11794;Parent=Msa0021290-mRNA-1 |
| chr1_1 | exon | 37732028 | 37732750 | 37732028 | ID=Msa0021290-mRNA-1:exon:11795;Parent=Msa0021290-mRNA-1 |
| chr1_1 | five_prime_UTR | 37729690 | 37729857 | 37729690 | ID=Msa0021290-mRNA-1:five_prime_utr;Parent=Msa0021290-mRNA-1 |
| chr1_1 | CDS | 37729858 | 37730003 | 37729858 | ID=Msa0021290-mRNA-1:cds;Parent=Msa0021290-mRNA-1 |
| chr1_1 | CDS | 37730084 | 37730235 | 37730084 | ID=Msa0021290-mRNA-1:cds;Parent=Msa0021290-mRNA-1 |
| chr1_1 | CDS | 37730339 | 37730464 | 37730339 | ID=Msa0021290-mRNA-1:cds;Parent=Msa0021290-mRNA-1 |
| chr1_1 | CDS | 37732028 | 37732269 | 37732028 | ID=Msa0021290-mRNA-1:cds;Parent=Msa0021290-mRNA-1 |
| chr1_1 | three_prime_UTR | 37732270 | 37732750 | 37732270 | ID=Msa0021290-mRNA-1:three_prime_utr;Parent=Msa0021290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
