AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0182050


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0182050 MtrunA17_Chr1g0201721 99.743 389 1 0 23 411 1 389 0.0 798
Msa0182050 MtrunA17_Chr4g0051121 90.746 389 36 0 23 411 1 389 0.0 723
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0182050 AT1G43170.1 87.339 387 49 0 23 409 1 387 0.0 696
Msa0182050 AT1G43170.6 87.339 387 49 0 23 409 1 387 0.0 696
Msa0182050 AT1G43170.2 87.339 387 49 0 23 409 1 387 0.0 696
Msa0182050 AT1G43170.3 87.339 387 49 0 23 409 1 387 0.0 696
Msa0182050 AT1G43170.9 87.339 387 49 0 23 409 1 387 0.0 696
Msa0182050 AT1G43170.8 87.339 387 49 0 23 409 1 387 0.0 696
Msa0182050 AT1G43170.7 87.339 387 49 0 23 409 1 387 0.0 696
Msa0182050 AT1G43170.5 87.339 387 49 0 23 409 1 387 0.0 696
Msa0182050 AT1G61580.1 85.492 386 56 0 23 408 1 386 0.0 685
Msa0182050 AT1G43170.4 86.054 294 41 0 116 409 11 304 0.0 542

Find 137 sgRNAs with CRISPR-Local

Find 228 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCATTATACTTCCAATTT+TGG 0.152169 1_4:-70469075 Msa0182050:three_prime_UTR
GGCTTGGTTGGGTCATCCTT+GGG 0.196053 1_4:+70471662 None:intergenic
AAGGAATAAAACACCAAAAT+TGG 0.248184 1_4:+70469062 None:intergenic
TCACTTGAATCTCCATGATA+TGG 0.254331 1_4:+70470051 None:intergenic
TGGCTTGGTTGGGTCATCCT+TGG 0.260735 1_4:+70471661 None:intergenic
TGTCAATCATTTCATCCTTC+TGG 0.271486 1_4:+70469952 None:intergenic
CTTGCTGAAAGCCTTCTTCT+TGG 0.282480 1_4:+70470928 None:intergenic
ATCGATACCTCTTCCAAGTT+TGG 0.285033 1_4:-70469327 Msa0182050:CDS
ACCCAAGCTAACTGCCTTCT+TGG 0.286054 1_4:-70471639 Msa0182050:CDS
GCACCCAAGACACGGTTCTT+TGG 0.287363 1_4:-70472140 Msa0182050:CDS
CACCCAAGACACGGTTCTTT+GGG 0.292688 1_4:-70472139 Msa0182050:CDS
AAAGAACTGCAGTAATAAAT+AGG 0.307287 1_4:+70469121 None:intergenic
TGACGAGCAGCACGCTTTCT+TGG 0.308401 1_4:+70472109 None:intergenic
GTTAGCTTGGGTGGCTTGGT+TGG 0.310280 1_4:+70471650 None:intergenic
TCAGTTTCTCAAGCTGGGTC+TGG 0.325691 1_4:+70470864 None:intergenic
CACCAAAATTGGAAGTATAA+TGG 0.325747 1_4:+70469073 None:intergenic
TATCTCAGAGCTTCACAAAA+AGG 0.335186 1_4:-70471113 Msa0182050:intron
TTGAGGAAGGTTGCATGTAT+TGG 0.358668 1_4:-70469843 Msa0182050:CDS
GACGCCTCAAAGCTTAATTA+TGG 0.367105 1_4:-70469260 Msa0182050:exon
CTCACCTATCGAACTCAGTC+TGG 0.367617 1_4:+70469694 None:intergenic
TTAGCTTGGGTGGCTTGGTT+GGG 0.372233 1_4:+70471651 None:intergenic
GGCAGTTAGCTTGGGTGGCT+TGG 0.374534 1_4:+70471646 None:intergenic
ACTTCTTCAGTTTCTCAAGC+TGG 0.375617 1_4:+70470858 None:intergenic
CAGAGTAATAACCCTCTTCT+TGG 0.375680 1_4:+70469410 None:intergenic
TTTGCTTCTCTGATGTTGTC+TGG 0.376238 1_4:+70469292 None:intergenic
TCTTTCACTGTTGCCAGAGC+TGG 0.398591 1_4:-70469798 Msa0182050:CDS
CTTCTTCAGTTTCTCAAGCT+GGG 0.407032 1_4:+70470859 None:intergenic
GACGAGCAGCACGCTTTCTT+GGG 0.410830 1_4:+70472110 None:intergenic
AACTGCCTTCTTGGGTTACA+AGG 0.417572 1_4:-70471630 Msa0182050:CDS
CACTTGAATCTCCATGATAT+GGG 0.428524 1_4:+70470052 None:intergenic
CCCAAGCTAACTGCCTTCTT+GGG 0.428836 1_4:-70471638 Msa0182050:CDS
ATTTACAAGCTCGGCAAAGT+TGG 0.433680 1_4:-70469735 Msa0182050:CDS
ACCCAAGAAGGCAGTTAGCT+TGG 0.433816 1_4:+70471637 None:intergenic
ATCCCAAAGAACCGTGTCTT+GGG 0.433824 1_4:+70472137 None:intergenic
ATGAAGGTGTTGTTACTCGT+TGG 0.437276 1_4:-70469902 Msa0182050:CDS
TTAGAACATTGAACACTGTA+TGG 0.438637 1_4:-70471006 Msa0182050:CDS
CATTGGAGTGACCAAGGGTA+AGG 0.441876 1_4:-70469928 Msa0182050:CDS
ATGGTTGTTGTCGGTGTTGT+GGG 0.442307 1_4:-70471052 Msa0182050:CDS
GAAACGACCATGTCCAAACT+TGG 0.447320 1_4:+70469314 None:intergenic
ATCTCAGATCAGGAAAATGA+AGG 0.447874 1_4:-70470093 Msa0182050:intron
CGAACTCAGTCTGGGCGTCA+TGG 0.449202 1_4:+70469703 None:intergenic
GCCTTCTTGGGTTACAAGGC+TGG 0.450941 1_4:-70471626 Msa0182050:CDS
TGAAGGTGTTGTTACTCGTT+GGG 0.451002 1_4:-70469901 Msa0182050:CDS
AGCGTAGGTTCTACAAGAAC+TGG 0.457230 1_4:-70470958 Msa0182050:CDS
ACCCCTCCCATGGTTGTTGT+CGG 0.462754 1_4:-70471061 Msa0182050:CDS
GTCTTCCTCGTAAGACTCAC+AGG 0.464950 1_4:-70469869 Msa0182050:CDS
TGAGAAAGACATTACACCTA+TGG 0.467448 1_4:-70469499 Msa0182050:CDS
GTAAGACTCACAGGGGTTTG+AGG 0.468820 1_4:-70469860 Msa0182050:CDS
CCCAAGAAGGCAGTTAGCTT+GGG 0.469247 1_4:+70471638 None:intergenic
ACTACCATAATTAAGCTTTG+AGG 0.473296 1_4:+70469256 None:intergenic
GATGAAATGATTGACATCAT+TGG 0.474891 1_4:-70469945 Msa0182050:CDS
TTCTGGAACACAGCATCAAT+AGG 0.475795 1_4:+70469969 None:intergenic
CATGGTTGTTGTCGGTGTTG+TGG 0.479589 1_4:-70471053 Msa0182050:CDS
GACTTCTCGTCTTGCTCTTG+AGG 0.480840 1_4:-70469367 Msa0182050:CDS
TGTTCAGCTCAGTTCTGTGA+TGG 0.485951 1_4:+70469763 None:intergenic
AATCCCAAAGAACCGTGTCT+TGG 0.489699 1_4:+70472136 None:intergenic
AACAAGAAAATTTACAAGCT+CGG 0.491496 1_4:-70469744 Msa0182050:CDS
AGAGTAATAACCCTCTTCTT+GGG 0.492275 1_4:+70469411 None:intergenic
GTATGGTACTTACTGGATCC+TGG 0.497646 1_4:+70471572 None:intergenic
TGCAACTGTTATCCGTGTCT+TGG 0.501459 1_4:-70470834 Msa0182050:CDS
GACGAGAAGTCTGCTTAAGA+AGG 0.502167 1_4:+70469379 None:intergenic
ACAGAAGAAAGCCCATATCA+TGG 0.505342 1_4:-70470063 Msa0182050:CDS
GCTGCTCGTCACAGAGGAAA+AGG 0.506457 1_4:-70472097 Msa0182050:intron
AGGGGTCTCGATGATTGTCA+CGG 0.507650 1_4:+70471078 None:intergenic
GCTTGGTTGGGTCATCCTTG+GGG 0.515078 1_4:+70471663 None:intergenic
GTCAGAGAAGTCGAGAAGCC+AGG 0.515408 1_4:-70471590 Msa0182050:CDS
ACCTTCATAACCCTTACCCT+TGG 0.517932 1_4:+70469917 None:intergenic
GTATCCGTTCTGACCAGCTC+TGG 0.518044 1_4:+70469785 None:intergenic
ATGATCAAGGGAGGCTGTGT+TGG 0.526401 1_4:-70469435 Msa0182050:CDS
CGGTGGTACCATCGCTCAGA+AGG 0.529087 1_4:-70470027 Msa0182050:CDS
GAACTCAGTCTGGGCGTCAT+GGG 0.529915 1_4:+70469704 None:intergenic
ACCAAGGGTAAGGGTTATGA+AGG 0.530593 1_4:-70469918 Msa0182050:CDS
CGAGTTATTAAAATGTCAGA+TGG 0.541412 1_4:+70469166 None:intergenic
GACAACAGCAGCAAAAGCTT+AGG 0.542238 1_4:-70472292 Msa0182050:intron
TCTCAGATCAGGAAAATGAA+GGG 0.547784 1_4:-70470092 Msa0182050:intron
CACAACACCGACAACAACCA+TGG 0.549447 1_4:+70471054 None:intergenic
GTTCAATGTTCTAAGACCAC+GGG 0.551523 1_4:+70471015 None:intergenic
ACCAGCCTTGTAACCCAAGA+AGG 0.552644 1_4:+70471625 None:intergenic
ACCGACAACAACCATGGGAG+GGG 0.558376 1_4:+70471060 None:intergenic
AAGAAGGCAGTTAGCTTGGG+TGG 0.559172 1_4:+70471641 None:intergenic
AGGTTGCATGTATTGGAGCT+TGG 0.565352 1_4:-70469836 Msa0182050:CDS
TGTTCAATGTTCTAAGACCA+CGG 0.566021 1_4:+70471014 None:intergenic
CTGGTGCAAGTCCAAGAAGA+AGG 0.567366 1_4:-70470939 Msa0182050:CDS
TCTCGACTTCTCTGACAATG+TGG 0.567495 1_4:+70471597 None:intergenic
GACTCACAGGGGTTTGAGGA+AGG 0.568790 1_4:-70469856 Msa0182050:CDS
AGTACATAGTTTAAAACAGA+TGG 0.571470 1_4:+70469193 None:intergenic
AAGTCTGCTTAAGAAGGGAC+TGG 0.577488 1_4:+70469385 None:intergenic
AAGCAGTATGAAAGTGATGA+GGG 0.580782 1_4:-70470899 Msa0182050:CDS
ACCTCTTCCAAGTTTGGACA+TGG 0.582976 1_4:-70469321 Msa0182050:CDS
TCTTCCTCGTAAGACTCACA+GGG 0.584859 1_4:-70469868 Msa0182050:CDS
CACCGACAACAACCATGGGA+GGG 0.590277 1_4:+70471059 None:intergenic
CTCGACTTCTCTGACAATGT+GGG 0.590618 1_4:+70471598 None:intergenic
CCGTGTCTTGGCTCACACCC+AGG 0.590901 1_4:-70470822 Msa0182050:intron
TCACCTATCGAACTCAGTCT+GGG 0.593125 1_4:+70469695 None:intergenic
ATTGGAGTGACCAAGGGTAA+GGG 0.593223 1_4:-70469927 Msa0182050:CDS
ACGCCCAGACTGAGTTCGAT+AGG 0.595359 1_4:-70469698 Msa0182050:intron
GAGAAAGACATTACACCTAT+GGG 0.596080 1_4:-70469498 Msa0182050:CDS
GGGGTCTCGATGATTGTCAC+GGG 0.596471 1_4:+70471079 None:intergenic
ACAACACCGACAACAACCAT+GGG 0.596534 1_4:+70471055 None:intergenic
TGACATCATTGGAGTGACCA+AGG 0.598559 1_4:-70469934 Msa0182050:CDS
TGCAGTGAAGGCTTTCCCCA+AGG 0.599253 1_4:-70471678 Msa0182050:intron
ACCATGTCCAAACTTGGAAG+AGG 0.600841 1_4:+70469320 None:intergenic
ATGGGTGGTTTCCCACACTA+CGG 0.607609 1_4:-70469480 Msa0182050:CDS
ACAGTGAAAGAAACTCTAGC+AGG 0.609701 1_4:+70469810 None:intergenic
CTGTGTTGGTCCCAAGAAGA+GGG 0.610053 1_4:-70469421 Msa0182050:CDS
TGGTACCATCGCTCAGAAGG+TGG 0.611098 1_4:-70470024 Msa0182050:CDS
ACGAGAAGTCTGCTTAAGAA+GGG 0.612938 1_4:+70469380 None:intergenic
AAAGCAGTATGAAAGTGATG+AGG 0.613214 1_4:-70470900 Msa0182050:CDS
GCTGTGTTGGTCCCAAGAAG+AGG 0.613945 1_4:-70469422 Msa0182050:CDS
AAGTTCGAGCACCCAAGACA+CGG 0.616675 1_4:-70472148 Msa0182050:CDS
CCTTGACAATACCGTAGTGT+GGG 0.616873 1_4:+70469469 None:intergenic
GTTGCCAGAGCTGGTCAGAA+CGG 0.617265 1_4:-70469789 Msa0182050:CDS
AATCATCGAGACCCCTCCCA+TGG 0.618819 1_4:-70471071 Msa0182050:CDS
CAAGCTCGGCAAAGTTGGAG+AGG 0.619055 1_4:-70469730 Msa0182050:CDS
TGAGTGAGGAAATTAAGCGT+AGG 0.620145 1_4:-70470973 Msa0182050:CDS
CCCACACTACGGTATTGTCA+AGG 0.620478 1_4:-70469469 Msa0182050:CDS
GAAGGTGTTGTTACTCGTTG+GGG 0.623077 1_4:-70469900 Msa0182050:CDS
AAAGTCCACCTTCTGAGCGA+TGG 0.625795 1_4:+70470019 None:intergenic
TAGTGTGGGAAACCACCCAT+AGG 0.626093 1_4:+70469483 None:intergenic
CCTGGGTGTGAGCCAAGACA+CGG 0.628233 1_4:+70470822 None:intergenic
GACATCATTGGAGTGACCAA+GGG 0.628824 1_4:-70469933 Msa0182050:CDS
TATTGATGCTGTGTTCCAGA+AGG 0.629359 1_4:-70469967 Msa0182050:CDS
ACACCGACAACAACCATGGG+AGG 0.629529 1_4:+70471058 None:intergenic
ATCATGGAGATTCAAGTGAA+CGG 0.637492 1_4:-70470047 Msa0182050:CDS
TCCTTGACAATACCGTAGTG+TGG 0.648748 1_4:+70469468 None:intergenic
ACACTTCACTTGCGTAGCAG+CGG 0.649010 1_4:-70472317 Msa0182050:CDS
AAAGACATTACACCTATGGG+TGG 0.665025 1_4:-70469495 Msa0182050:CDS
AAACCCCTGTGAGTCTTACG+AGG 0.675290 1_4:+70469864 None:intergenic
AGGAAAACTAAAATAACCCG+AGG 0.683530 1_4:+70469141 None:intergenic
AAGCGTGCTGCTCGTCACAG+AGG 0.692287 1_4:-70472103 Msa0182050:CDS
ATGGACTCAGCATTTGAGTG+AGG 0.693670 1_4:-70470987 Msa0182050:CDS
AGCAGTATGAAAGTGATGAG+GGG 0.718906 1_4:-70470898 Msa0182050:CDS
ACACTACGGTATTGTCAAGG+AGG 0.722752 1_4:-70469466 Msa0182050:CDS
ATGGAGATTCAAGTGAACGG+TGG 0.740588 1_4:-70470044 Msa0182050:CDS
TTCAATGTTCTAAGACCACG+GGG 0.753117 1_4:+70471016 None:intergenic
CTTCCTCGTAAGACTCACAG+GGG 0.755519 1_4:-70469867 Msa0182050:CDS
GGTTATGTGAAAACTCCCCG+TGG 0.767480 1_4:-70471031 Msa0182050:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTAATTTTCTTAAAAACAT+TGG - chr1_4:70469572-70469591 Msa0182050:intron 10.0%
!!! TTATGATTTTTTTGTTTAAT+TGG - chr1_4:70469603-70469622 Msa0182050:intron 10.0%
!!! AATGATATCATAAATTTTTT+GGG + chr1_4:70469861-70469880 None:intergenic 10.0%
!!! AAATGATATCATAAATTTTT+TGG + chr1_4:70469862-70469881 None:intergenic 10.0%
!!! TATCATTTATTTGATATTTT+TGG - chr1_4:70469874-70469893 Msa0182050:CDS 10.0%
!!! TTGGATTTATTTTTTATATT+TGG - chr1_4:70471030-70471049 Msa0182050:CDS 10.0%
!!! TGATAATTTTAAATAACTAA+TGG - chr1_4:70471179-70471198 Msa0182050:intron 10.0%
!! TTAACAAAATTTCAATTACA+AGG + chr1_4:70469313-70469332 None:intergenic 15.0%
!! TAAATATGATTAAATAAAGC+AGG + chr1_4:70469506-70469525 None:intergenic 15.0%
!!! AATAAAAAACTTGTTATCAA+GGG + chr1_4:70469545-70469564 None:intergenic 15.0%
!!! AAATAAAAAACTTGTTATCA+AGG + chr1_4:70469546-70469565 None:intergenic 15.0%
!!! TTTATTTTTGAAACAACATA+GGG + chr1_4:70470037-70470056 None:intergenic 15.0%
!!! TTTTATTTTTGAAACAACAT+AGG + chr1_4:70470038-70470057 None:intergenic 15.0%
!! TATGTAACAATTATCATATT+AGG - chr1_4:70471123-70471142 Msa0182050:intron 15.0%
!!! AAATCAAAATTTTAAGAGAA+AGG + chr1_4:70472302-70472321 None:intergenic 15.0%
!! ACAACATAATGATAAGAAAT+GGG + chr1_4:70469284-70469303 None:intergenic 20.0%
!! AACAACATAATGATAAGAAA+TGG + chr1_4:70469285-70469304 None:intergenic 20.0%
!!! TAAAATGACAATCATTTTCT+TGG - chr1_4:70469335-70469354 Msa0182050:CDS 20.0%
!! ATTGGATCTAATGATATAAT+TGG - chr1_4:70469362-70469381 Msa0182050:CDS 20.0%
!! CTAATATCATAGTTATAATC+AGG + chr1_4:70469389-70469408 None:intergenic 20.0%
!! GTCAAATTACATATTCATAA+GGG + chr1_4:70469484-70469503 None:intergenic 20.0%
!! ATCTAATTTGATGAATGTTT+AGG - chr1_4:70469818-70469837 Msa0182050:CDS 20.0%
!!! GTATTTTTACCTCAAATTAT+AGG - chr1_4:70469902-70469921 Msa0182050:CDS 20.0%
!!! TTATTTTTGAAACAACATAG+GGG + chr1_4:70470036-70470055 None:intergenic 20.0%
!! TTAAGCATTTCAAAAAATCA+GGG + chr1_4:70470193-70470212 None:intergenic 20.0%
!!! CTAGATTTTTCTTAAAAGTT+AGG + chr1_4:70470792-70470811 None:intergenic 20.0%
!!! TTTATTTTGGATGATGTTTT+TGG - chr1_4:70470831-70470850 Msa0182050:CDS 20.0%
!!! ATTTTTTATATTTGGCAGTA+TGG - chr1_4:70471038-70471057 Msa0182050:CDS 20.0%
! GAATTGAAAGAATTGAGAAT+GGG + chr1_4:70469084-70469103 None:intergenic 25.0%
! AGAATTGAAAGAATTGAGAA+TGG + chr1_4:70469085-70469104 None:intergenic 25.0%
!! AATCATTTTCTTGGTTAGAT+TGG - chr1_4:70469344-70469363 Msa0182050:CDS 25.0%
! GGTCAAATTACATATTCATA+AGG + chr1_4:70469485-70469504 None:intergenic 25.0%
! TAAATGAATCAAAGCTTGAT+GGG + chr1_4:70469795-70469814 None:intergenic 25.0%
! TTCAGTGAAAAACTAAACAA+AGG + chr1_4:70469989-70470008 None:intergenic 25.0%
! TTTGGCTGAAAATGAATATT+GGG + chr1_4:70470079-70470098 None:intergenic 25.0%
! ATTTGGCTGAAAATGAATAT+TGG + chr1_4:70470080-70470099 None:intergenic 25.0%
! ATAAAATGCAAAACCAGATT+TGG + chr1_4:70470097-70470116 None:intergenic 25.0%
!! TAATGTGTTATTGTTGATGT+AGG - chr1_4:70470152-70470171 Msa0182050:intron 25.0%
! TAAGCATTTCAAAAAATCAG+GGG + chr1_4:70470192-70470211 None:intergenic 25.0%
! GTTAAGCATTTCAAAAAATC+AGG + chr1_4:70470194-70470213 None:intergenic 25.0%
! AAAGAAATAGACAGCATATT+TGG + chr1_4:70470552-70470571 None:intergenic 25.0%
!! CTTTTGCTTCTCATTATATT+AGG - chr1_4:70470574-70470593 Msa0182050:intron 25.0%
! AACAAGAAAATTTACAAGCT+CGG - chr1_4:70471598-70471617 Msa0182050:CDS 25.0%
!! AGTACATAGTTTAAAACAGA+TGG + chr1_4:70472152-70472171 None:intergenic 25.0%
! AAAGAACTGCAGTAATAAAT+AGG + chr1_4:70472224-70472243 None:intergenic 25.0%
!! TTCCATTATACTTCCAATTT+TGG - chr1_4:70472267-70472286 Msa0182050:intron 25.0%
! AAGGAATAAAACACCAAAAT+TGG + chr1_4:70472283-70472302 None:intergenic 25.0%
!! TGTGATTTGTTGTTGTTTGA+AGG - chr1_4:70469150-70469169 Msa0182050:three_prime_UTR 30.0%
TATCTGAGTGTAACTTAACT+TGG - chr1_4:70469628-70469647 Msa0182050:intron 30.0%
GTAAATGAATCAAAGCTTGA+TGG + chr1_4:70469796-70469815 None:intergenic 30.0%
AACTTCTCTCCTATAATTTG+AGG + chr1_4:70469914-70469933 None:intergenic 30.0%
!! ACTTTGAAACATGTAATCTC+AGG + chr1_4:70469948-70469967 None:intergenic 30.0%
! TATTCATTTTCAGCCAAATC+TGG - chr1_4:70470081-70470100 Msa0182050:CDS 30.0%
TGTGTTCTCTTACATTTACA+TGG - chr1_4:70470125-70470144 Msa0182050:intron 30.0%
TTAGAACATTGAACACTGTA+TGG - chr1_4:70470336-70470355 Msa0182050:intron 30.0%
TTGCTTCTCATTATATTAGG+AGG - chr1_4:70470577-70470596 Msa0182050:intron 30.0%
AAATAAAGTTCCAGAACTAC+TGG + chr1_4:70470818-70470837 None:intergenic 30.0%
!!! GTAGTTCTGGAACTTTATTT+TGG - chr1_4:70470818-70470837 Msa0182050:intron 30.0%
!! AGTCACAATTTTGATACTAG+TGG - chr1_4:70470861-70470880 Msa0182050:CDS 30.0%
!! GTCACAATTTTGATACTAGT+GGG - chr1_4:70470862-70470881 Msa0182050:CDS 30.0%
!! ATTTTCCTGATCTGAGATAA+AGG + chr1_4:70471247-70471266 None:intergenic 30.0%
!!! ATACAACTTTTTTGAGAAGC+AGG - chr1_4:70471348-70471367 Msa0182050:intron 30.0%
GATGAAATGATTGACATCAT+TGG - chr1_4:70471397-70471416 Msa0182050:intron 30.0%
! TCAGAGAAGCAAAAGTTTTA+TGG - chr1_4:70472060-70472079 Msa0182050:intron 30.0%
ACTACCATAATTAAGCTTTG+AGG + chr1_4:70472089-70472108 None:intergenic 30.0%
!!! TGGTAGTAGTTTTGAAATGT+TGG - chr1_4:70472102-70472121 Msa0182050:CDS 30.0%
!!! GGTAGTAGTTTTGAAATGTT+GGG - chr1_4:70472103-70472122 Msa0182050:CDS 30.0%
CGAGTTATTAAAATGTCAGA+TGG + chr1_4:70472179-70472198 None:intergenic 30.0%
!! CATTTTAATAACTCGATCCT+CGG - chr1_4:70472184-70472203 Msa0182050:intron 30.0%
!! ATTTTAATAACTCGATCCTC+GGG - chr1_4:70472185-70472204 Msa0182050:intron 30.0%
! CACCAAAATTGGAAGTATAA+TGG + chr1_4:70472272-70472291 None:intergenic 30.0%
!! GATTTGTTGTTGTTTGAAGG+AGG - chr1_4:70469153-70469172 Msa0182050:three_prime_UTR 35.0%
! TGAGTGTAACTTAACTTGGT+TGG - chr1_4:70469632-70469651 Msa0182050:intron 35.0%
!! TGTGAAGCTCTGAGATAATA+GGG + chr1_4:70470226-70470245 None:intergenic 35.0%
!! TTGTGAAGCTCTGAGATAAT+AGG + chr1_4:70470227-70470246 None:intergenic 35.0%
TATCTCAGAGCTTCACAAAA+AGG - chr1_4:70470229-70470248 Msa0182050:intron 35.0%
!! TGTTCAATGTTCTAAGACCA+CGG + chr1_4:70470331-70470350 None:intergenic 35.0%
AAAGCAGTATGAAAGTGATG+AGG - chr1_4:70470442-70470461 Msa0182050:intron 35.0%
AAGCAGTATGAAAGTGATGA+GGG - chr1_4:70470443-70470462 Msa0182050:intron 35.0%
ACGAGATTTCTGACTCTTAT+TGG - chr1_4:70471011-70471030 Msa0182050:CDS 35.0%
GTTTACCTTTATCTCAGATC+AGG - chr1_4:70471239-70471258 Msa0182050:intron 35.0%
ATCTCAGATCAGGAAAATGA+AGG - chr1_4:70471249-70471268 Msa0182050:intron 35.0%
TCTCAGATCAGGAAAATGAA+GGG - chr1_4:70471250-70471269 Msa0182050:intron 35.0%
CACTTGAATCTCCATGATAT+GGG + chr1_4:70471293-70471312 None:intergenic 35.0%
TCACTTGAATCTCCATGATA+TGG + chr1_4:70471294-70471313 None:intergenic 35.0%
ATCATGGAGATTCAAGTGAA+CGG - chr1_4:70471295-70471314 Msa0182050:intron 35.0%
TGTCAATCATTTCATCCTTC+TGG + chr1_4:70471393-70471412 None:intergenic 35.0%
AACATGCTCTGATTGTTCAT+TGG - chr1_4:70471672-70471691 Msa0182050:CDS 35.0%
ACTGCAACAGATTTCAGTTT+AGG - chr1_4:70471750-70471769 Msa0182050:intron 35.0%
TGAGAAAGACATTACACCTA+TGG - chr1_4:70471843-70471862 Msa0182050:intron 35.0%
GAGAAAGACATTACACCTAT+GGG - chr1_4:70471844-70471863 Msa0182050:intron 35.0%
! GAGGATTTTCTGATGATCAA+GGG - chr1_4:70471895-70471914 Msa0182050:intron 35.0%
AGAGTAATAACCCTCTTCTT+GGG + chr1_4:70471934-70471953 None:intergenic 35.0%
AGGAAAACTAAAATAACCCG+AGG + chr1_4:70472204-70472223 None:intergenic 35.0%
TCAACAGCATTCAAGTGTTC+AGG + chr1_4:70469427-70469446 None:intergenic 40.0%
! TTGATGGGTATGGTACTTAC+TGG + chr1_4:70469780-70469799 None:intergenic 40.0%
! GAATCAAAGCTTGATGGGTA+TGG + chr1_4:70469790-70469809 None:intergenic 40.0%
!! TTCAATGTTCTAAGACCACG+GGG + chr1_4:70470329-70470348 None:intergenic 40.0%
!! GTTCAATGTTCTAAGACCAC+GGG + chr1_4:70470330-70470349 None:intergenic 40.0%
TGAGTGAGGAAATTAAGCGT+AGG - chr1_4:70470369-70470388 Msa0182050:intron 40.0%
AGCAGTATGAAAGTGATGAG+GGG - chr1_4:70470444-70470463 Msa0182050:intron 40.0%
CTTCTTCAGTTTCTCAAGCT+GGG + chr1_4:70470486-70470505 None:intergenic 40.0%
ACTTCTTCAGTTTCTCAAGC+TGG + chr1_4:70470487-70470506 None:intergenic 40.0%
AGCATATTTGGCAGTTACCT+GGG + chr1_4:70470540-70470559 None:intergenic 40.0%
ACTAGATCAGAAATCTCGTG+TGG + chr1_4:70470749-70470768 None:intergenic 40.0%
AATCTAGTCACCAGTAGTTC+TGG - chr1_4:70470805-70470824 Msa0182050:intron 40.0%
TAAGAGTCAGAAATCTCGTG+TGG + chr1_4:70471010-70471029 None:intergenic 40.0%
TCAATGACTCTCGACTCATA+TGG - chr1_4:70471061-70471080 Msa0182050:CDS 40.0%
ACAGAAGAAAGCCCATATCA+TGG - chr1_4:70471279-70471298 Msa0182050:intron 40.0%
!! TTCTGGAACACAGCATCAAT+AGG + chr1_4:70471376-70471395 None:intergenic 40.0%
TATTGATGCTGTGTTCCAGA+AGG - chr1_4:70471375-70471394 Msa0182050:intron 40.0%
!! ATGAAGGTGTTGTTACTCGT+TGG - chr1_4:70471440-70471459 Msa0182050:intron 40.0%
!! TGAAGGTGTTGTTACTCGTT+GGG - chr1_4:70471441-70471460 Msa0182050:intron 40.0%
TTGAGGAAGGTTGCATGTAT+TGG - chr1_4:70471499-70471518 Msa0182050:intron 40.0%
ACAGTGAAAGAAACTCTAGC+AGG + chr1_4:70471535-70471554 None:intergenic 40.0%
ATTTACAAGCTCGGCAAAGT+TGG - chr1_4:70471607-70471626 Msa0182050:CDS 40.0%
CCAAAAAGGCTGGATAAGTT+TGG + chr1_4:70471813-70471832 None:intergenic 40.0%
! CCAAACTTATCCAGCCTTTT+TGG - chr1_4:70471810-70471829 Msa0182050:intron 40.0%
!!! ATCCAGCCTTTTTGGTTAAC+AGG - chr1_4:70471818-70471837 Msa0182050:intron 40.0%
CTCAGTCCTGTTAACCAAAA+AGG + chr1_4:70471827-70471846 None:intergenic 40.0%
AAAGACATTACACCTATGGG+TGG - chr1_4:70471847-70471866 Msa0182050:intron 40.0%
! GGAGGATTTTCTGATGATCA+AGG - chr1_4:70471894-70471913 Msa0182050:intron 40.0%
! GATTTTCTGATGATCAAGGG+AGG - chr1_4:70471898-70471917 Msa0182050:intron 40.0%
CAGAGTAATAACCCTCTTCT+TGG + chr1_4:70471935-70471954 None:intergenic 40.0%
ACGAGAAGTCTGCTTAAGAA+GGG + chr1_4:70471965-70471984 None:intergenic 40.0%
ATCGATACCTCTTCCAAGTT+TGG - chr1_4:70472015-70472034 Msa0182050:intron 40.0%
TTTGCTTCTCTGATGTTGTC+TGG + chr1_4:70472053-70472072 None:intergenic 40.0%
GACGCCTCAAAGCTTAATTA+TGG - chr1_4:70472082-70472101 Msa0182050:intron 40.0%
GACAACAGCAGCAAAAGCTT+AGG - chr1_4:70469050-70469069 Msa0182050:three_prime_UTR 45.0%
ATCCCAAAGAACCGTGTCTT+GGG + chr1_4:70469208-70469227 None:intergenic 45.0%
AATCCCAAAGAACCGTGTCT+TGG + chr1_4:70469209-70469228 None:intergenic 45.0%
AACTGCCTTCTTGGGTTACA+AGG - chr1_4:70469712-70469731 Msa0182050:CDS 45.0%
CTCGACTTCTCTGACAATGT+GGG + chr1_4:70469747-70469766 None:intergenic 45.0%
TCTCGACTTCTCTGACAATG+TGG + chr1_4:70469748-70469767 None:intergenic 45.0%
GTATGGTACTTACTGGATCC+TGG + chr1_4:70469773-70469792 None:intergenic 45.0%
ACAACACCGACAACAACCAT+GGG + chr1_4:70470290-70470309 None:intergenic 45.0%
!! ATGGTTGTTGTCGGTGTTGT+GGG - chr1_4:70470290-70470309 Msa0182050:intron 45.0%
ATGGACTCAGCATTTGAGTG+AGG - chr1_4:70470355-70470374 Msa0182050:intron 45.0%
AGCGTAGGTTCTACAAGAAC+TGG - chr1_4:70470384-70470403 Msa0182050:intron 45.0%
CTTGCTGAAAGCCTTCTTCT+TGG + chr1_4:70470417-70470436 None:intergenic 45.0%
TGCAACTGTTATCCGTGTCT+TGG - chr1_4:70470508-70470527 Msa0182050:intron 45.0%
CAGCATATTTGGCAGTTACC+TGG + chr1_4:70470541-70470560 None:intergenic 45.0%
! CGCTAATTAGGTGCTATGAG+CGG - chr1_4:70470979-70470998 Msa0182050:CDS 45.0%
ATGGAGATTCAAGTGAACGG+TGG - chr1_4:70471298-70471317 Msa0182050:intron 45.0%
TGACATCATTGGAGTGACCA+AGG - chr1_4:70471408-70471427 Msa0182050:intron 45.0%
GACATCATTGGAGTGACCAA+GGG - chr1_4:70471409-70471428 Msa0182050:intron 45.0%
ATTGGAGTGACCAAGGGTAA+GGG - chr1_4:70471415-70471434 Msa0182050:intron 45.0%
ACCAAGGGTAAGGGTTATGA+AGG - chr1_4:70471424-70471443 Msa0182050:intron 45.0%
ACCTTCATAACCCTTACCCT+TGG + chr1_4:70471428-70471447 None:intergenic 45.0%
!! GAAGGTGTTGTTACTCGTTG+GGG - chr1_4:70471442-70471461 Msa0182050:intron 45.0%
TCTTCCTCGTAAGACTCACA+GGG - chr1_4:70471474-70471493 Msa0182050:intron 45.0%
AGGTTGCATGTATTGGAGCT+TGG - chr1_4:70471506-70471525 Msa0182050:intron 45.0%
TGTTCAGCTCAGTTCTGTGA+TGG + chr1_4:70471582-70471601 None:intergenic 45.0%
TCACCTATCGAACTCAGTCT+GGG + chr1_4:70471650-70471669 None:intergenic 45.0%
GTCCTGTTAACCAAAAAGGC+TGG + chr1_4:70471823-70471842 None:intergenic 45.0%
CCTTGACAATACCGTAGTGT+GGG + chr1_4:70471876-70471895 None:intergenic 45.0%
TCCTTGACAATACCGTAGTG+TGG + chr1_4:70471877-70471896 None:intergenic 45.0%
ACACTACGGTATTGTCAAGG+AGG - chr1_4:70471876-70471895 Msa0182050:intron 45.0%
AAGTCTGCTTAAGAAGGGAC+TGG + chr1_4:70471960-70471979 None:intergenic 45.0%
GACGAGAAGTCTGCTTAAGA+AGG + chr1_4:70471966-70471985 None:intergenic 45.0%
ACCTCTTCCAAGTTTGGACA+TGG - chr1_4:70472021-70472040 Msa0182050:intron 45.0%
ACCATGTCCAAACTTGGAAG+AGG + chr1_4:70472025-70472044 None:intergenic 45.0%
GAAACGACCATGTCCAAACT+TGG + chr1_4:70472031-70472050 None:intergenic 45.0%
ACACTTCACTTGCGTAGCAG+CGG - chr1_4:70469025-70469044 Msa0182050:three_prime_UTR 50.0%
AAGTTCGAGCACCCAAGACA+CGG - chr1_4:70469194-70469213 Msa0182050:three_prime_UTR 50.0%
CACCCAAGACACGGTTCTTT+GGG - chr1_4:70469203-70469222 Msa0182050:three_prime_UTR 50.0%
TGGTGTGACTACTGCAGTGA+AGG - chr1_4:70469652-70469671 Msa0182050:intron 50.0%
!! TTAGCTTGGGTGGCTTGGTT+GGG + chr1_4:70469694-70469713 None:intergenic 50.0%
! AAGAAGGCAGTTAGCTTGGG+TGG + chr1_4:70469704-70469723 None:intergenic 50.0%
ACCCAAGCTAACTGCCTTCT+TGG - chr1_4:70469703-70469722 Msa0182050:CDS 50.0%
! CCCAAGAAGGCAGTTAGCTT+GGG + chr1_4:70469707-70469726 None:intergenic 50.0%
CCCAAGCTAACTGCCTTCTT+GGG - chr1_4:70469704-70469723 Msa0182050:CDS 50.0%
ACCCAAGAAGGCAGTTAGCT+TGG + chr1_4:70469708-70469727 None:intergenic 50.0%
! ACCAGCCTTGTAACCCAAGA+AGG + chr1_4:70469720-70469739 None:intergenic 50.0%
AGGGGTCTCGATGATTGTCA+CGG + chr1_4:70470267-70470286 None:intergenic 50.0%
CACAACACCGACAACAACCA+TGG + chr1_4:70470291-70470310 None:intergenic 50.0%
!! CATGGTTGTTGTCGGTGTTG+TGG - chr1_4:70470289-70470308 Msa0182050:intron 50.0%
GGTTATGTGAAAACTCCCCG+TGG - chr1_4:70470311-70470330 Msa0182050:intron 50.0%
CTGGTGCAAGTCCAAGAAGA+AGG - chr1_4:70470403-70470422 Msa0182050:intron 50.0%
TCAGTTTCTCAAGCTGGGTC+TGG + chr1_4:70470481-70470500 None:intergenic 50.0%
TCTGTGCAAACGCAGCACTT+AGG - chr1_4:70470705-70470724 Msa0182050:intron 50.0%
! CAGCACTTAGGTGCTATGAG+CGG - chr1_4:70470717-70470736 Msa0182050:intron 50.0%
GTGCAAACGCAGCGCTAATT+AGG - chr1_4:70470967-70470986 Msa0182050:CDS 50.0%
AAAGTCCACCTTCTGAGCGA+TGG + chr1_4:70471326-70471345 None:intergenic 50.0%
CATTGGAGTGACCAAGGGTA+AGG - chr1_4:70471414-70471433 Msa0182050:intron 50.0%
GTCTTCCTCGTAAGACTCAC+AGG - chr1_4:70471473-70471492 Msa0182050:intron 50.0%
CTTCCTCGTAAGACTCACAG+GGG - chr1_4:70471475-70471494 Msa0182050:intron 50.0%
AAACCCCTGTGAGTCTTACG+AGG + chr1_4:70471481-70471500 None:intergenic 50.0%
GTAAGACTCACAGGGGTTTG+AGG - chr1_4:70471482-70471501 Msa0182050:intron 50.0%
TCTTTCACTGTTGCCAGAGC+TGG - chr1_4:70471544-70471563 Msa0182050:intron 50.0%
CTCACCTATCGAACTCAGTC+TGG + chr1_4:70471651-70471670 None:intergenic 50.0%
TAGTGTGGGAAACCACCCAT+AGG + chr1_4:70471862-70471881 None:intergenic 50.0%
ATGGGTGGTTTCCCACACTA+CGG - chr1_4:70471862-70471881 Msa0182050:intron 50.0%
CCCACACTACGGTATTGTCA+AGG - chr1_4:70471873-70471892 Msa0182050:intron 50.0%
ATGATCAAGGGAGGCTGTGT+TGG - chr1_4:70471907-70471926 Msa0182050:intron 50.0%
! CTGTGTTGGTCCCAAGAAGA+GGG - chr1_4:70471921-70471940 Msa0182050:intron 50.0%
GACTTCTCGTCTTGCTCTTG+AGG - chr1_4:70471975-70471994 Msa0182050:intron 50.0%
GCACCCAAGACACGGTTCTT+TGG - chr1_4:70469202-70469221 Msa0182050:three_prime_UTR 55.0%
GACGAGCAGCACGCTTTCTT+GGG + chr1_4:70469235-70469254 None:intergenic 55.0%
TGACGAGCAGCACGCTTTCT+TGG + chr1_4:70469236-70469255 None:intergenic 55.0%
GCTGCTCGTCACAGAGGAAA+AGG - chr1_4:70469245-70469264 Msa0182050:three_prime_UTR 55.0%
TGCAGTGAAGGCTTTCCCCA+AGG - chr1_4:70469664-70469683 Msa0182050:intron 55.0%
GCTTGGTTGGGTCATCCTTG+GGG + chr1_4:70469682-70469701 None:intergenic 55.0%
! GGCTTGGTTGGGTCATCCTT+GGG + chr1_4:70469683-70469702 None:intergenic 55.0%
!! TGGCTTGGTTGGGTCATCCT+TGG + chr1_4:70469684-70469703 None:intergenic 55.0%
!! GTTAGCTTGGGTGGCTTGGT+TGG + chr1_4:70469695-70469714 None:intergenic 55.0%
GCCTTCTTGGGTTACAAGGC+TGG - chr1_4:70469716-70469735 Msa0182050:CDS 55.0%
GTCAGAGAAGTCGAGAAGCC+AGG - chr1_4:70469752-70469771 Msa0182050:CDS 55.0%
GGGGTCTCGATGATTGTCAC+GGG + chr1_4:70470266-70470285 None:intergenic 55.0%
AATCATCGAGACCCCTCCCA+TGG - chr1_4:70470271-70470290 Msa0182050:intron 55.0%
ACCCCTCCCATGGTTGTTGT+CGG - chr1_4:70470281-70470300 Msa0182050:intron 55.0%
ACCGACAACAACCATGGGAG+GGG + chr1_4:70470285-70470304 None:intergenic 55.0%
CACCGACAACAACCATGGGA+GGG + chr1_4:70470286-70470305 None:intergenic 55.0%
ACACCGACAACAACCATGGG+AGG + chr1_4:70470287-70470306 None:intergenic 55.0%
TGGTACCATCGCTCAGAAGG+TGG - chr1_4:70471318-70471337 Msa0182050:intron 55.0%
GACTCACAGGGGTTTGAGGA+AGG - chr1_4:70471486-70471505 Msa0182050:intron 55.0%
GTTGCCAGAGCTGGTCAGAA+CGG - chr1_4:70471553-70471572 Msa0182050:intron 55.0%
GTATCCGTTCTGACCAGCTC+TGG + chr1_4:70471560-70471579 None:intergenic 55.0%
CAAGCTCGGCAAAGTTGGAG+AGG - chr1_4:70471612-70471631 Msa0182050:CDS 55.0%
GAACTCAGTCTGGGCGTCAT+GGG + chr1_4:70471641-70471660 None:intergenic 55.0%
ACGCCCAGACTGAGTTCGAT+AGG - chr1_4:70471644-70471663 Msa0182050:CDS 55.0%
! GCTGTGTTGGTCCCAAGAAG+AGG - chr1_4:70471920-70471939 Msa0182050:intron 55.0%
! AAGCGTGCTGCTCGTCACAG+AGG - chr1_4:70469239-70469258 Msa0182050:three_prime_UTR 60.0%
! GGCAGTTAGCTTGGGTGGCT+TGG + chr1_4:70469699-70469718 None:intergenic 60.0%
CCTGGGTGTGAGCCAAGACA+CGG + chr1_4:70470523-70470542 None:intergenic 60.0%
CGGTGGTACCATCGCTCAGA+AGG - chr1_4:70471315-70471334 Msa0182050:intron 60.0%
CGAACTCAGTCTGGGCGTCA+TGG + chr1_4:70471642-70471661 None:intergenic 60.0%
CCGTGTCTTGGCTCACACCC+AGG - chr1_4:70470520-70470539 Msa0182050:intron 65.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 70469016 70472348 70469016 ID=Msa0182050;Name=Msa0182050
chr1_4 mRNA 70469016 70472348 70469016 ID=Msa0182050-mRNA-1;Parent=Msa0182050;Name=Msa0182050-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|1|0.83|1|1|1|6|250|411
chr1_4 exon 70469016 70469524 70469016 ID=Msa0182050-mRNA-1:exon:23510;Parent=Msa0182050-mRNA-1
chr1_4 exon 70469699 70470108 70469699 ID=Msa0182050-mRNA-1:exon:23509;Parent=Msa0182050-mRNA-1
chr1_4 exon 70470823 70471127 70470823 ID=Msa0182050-mRNA-1:exon:23508;Parent=Msa0182050-mRNA-1
chr1_4 exon 70471585 70471695 70471585 ID=Msa0182050-mRNA-1:exon:23507;Parent=Msa0182050-mRNA-1
chr1_4 exon 70472098 70472192 70472098 ID=Msa0182050-mRNA-1:exon:23506;Parent=Msa0182050-mRNA-1
chr1_4 exon 70472293 70472348 70472293 ID=Msa0182050-mRNA-1:exon:23505;Parent=Msa0182050-mRNA-1
chr1_4 CDS 70472293 70472348 70472293 ID=Msa0182050-mRNA-1:cds;Parent=Msa0182050-mRNA-1
chr1_4 CDS 70472098 70472192 70472098 ID=Msa0182050-mRNA-1:cds;Parent=Msa0182050-mRNA-1
chr1_4 CDS 70471585 70471695 70471585 ID=Msa0182050-mRNA-1:cds;Parent=Msa0182050-mRNA-1
chr1_4 CDS 70470823 70471127 70470823 ID=Msa0182050-mRNA-1:cds;Parent=Msa0182050-mRNA-1
chr1_4 CDS 70469699 70470108 70469699 ID=Msa0182050-mRNA-1:cds;Parent=Msa0182050-mRNA-1
chr1_4 CDS 70469266 70469524 70469266 ID=Msa0182050-mRNA-1:cds;Parent=Msa0182050-mRNA-1
chr1_4 three_prime_UTR 70469016 70469265 70469016 ID=Msa0182050-mRNA-1:three_prime_utr;Parent=Msa0182050-mRNA-1
Gene Sequence

>Msa0182050

GGTCTGTGTACACTTCACTTGCGTAGCAGCGGCAGACAACAGCAGCAAAAGCTTAGGAGGAAAAAGATGTCTCACAGAAAGTTCGAGCACCCAAGACACGGTTCTTTGGGATTTCTCCCAAGAAAGCGTGCTGCTCGTCACAGAGGAAAAGTGAAGGCTTTCCCCAAGGATGACCCAACCAAGCCACCCAAGCTAACTGCCTTCTTGGGTTACAAGGCTGGTATGACCCACATTGTCAGAGAAGTCGAGAAGCCAGGATCCAAGCTTCACAAAAAGGAGACTTGTGAGCCCGTGACAATCATCGAGACCCCTCCCATGGTTGTTGTCGGTGTTGTGGGTTATGTGAAAACTCCCCGTGGTCTTAGAACATTGAACACTGTATGGACTCAGCATTTGAGTGAGGAAATTAAGCGTAGGTTCTACAAGAACTGGTGCAAGTCCAAGAAGAAGGCTTTCAGCAAGTACTCAAAGCAGTATGAAAGTGATGAGGGGAAGAAAAACATCCAGACCCAGCTTGAGAAACTGAAGAAGTATGCAACTGTTATCCGTGTCTTGGCTCACACCCAGATCAGGAAAATGAAGGGTTTGAAACAGAAGAAAGCCCATATCATGGAGATTCAAGTGAACGGTGGTACCATCGCTCAGAAGGTGGACTTTGCATACAACTTTTTTGAGAAGCAGGTTCCTATTGATGCTGTGTTCCAGAAGGATGAAATGATTGACATCATTGGAGTGACCAAGGGTAAGGGTTATGAAGGTGTTGTTACTCGTTGGGGTGTTACTCGTCTTCCTCGTAAGACTCACAGGGGTTTGAGGAAGGTTGCATGTATTGGAGCTTGGCATCCTGCTAGAGTTTCTTTCACTGTTGCCAGAGCTGGTCAGAACGGATACCATCACAGAACTGAGCTGAACAAGAAAATTTACAAGCTCGGCAAAGTTGGAGAGGAGACCCATGACGCCCAGACTGAGTTCGATAGGACTGAGAAAGACATTACACCTATGGGTGGTTTCCCACACTACGGTATTGTCAAGGAGGATTTTCTGATGATCAAGGGAGGCTGTGTTGGTCCCAAGAAGAGGGTTATTACTCTGCGCCAGTCCCTTCTTAAGCAGACTTCTCGTCTTGCTCTTGAGGATATCAAACTCAAGTTTATCGATACCTCTTCCAAGTTTGGACATGGTCGTTTCCAGACAACATCAGAGAAGCAAAAGTTTTATGGACGCCTCAAAGCTTAA

Protein sequence

>Msa0182050

GLCTLHLRSSGRQQQQKLRRKKMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPTKPPKLTAFLGYKAGMTHIVREVEKPGSKLHKKETCEPVTIIETPPMVVVGVVGYVKTPRGLRTLNTVWTQHLSEEIKRRFYKNWCKSKKKAFSKYSKQYESDEGKKNIQTQLEKLKKYATVIRVLAHTQIRKMKGLKQKKAHIMEIQVNGGTIAQKVDFAYNFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKLGKVGEETHDAQTEFDRTEKDITPMGGFPHYGIVKEDFLMIKGGCVGPKKRVITLRQSLLKQTSRLALEDIKLKFIDTSSKFGHGRFQTTSEKQKFYGRLKA*