AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1347520

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1347520 MtrunA17_Chr2g0326281 92.398 763 44 2 1 749 1 763 0.0 1420
Msa1347520 MtrunA17_Chr4g0029671 72.955 758 169 11 1 749 1 731 0.0 1046
Msa1347520 MtrunA17_Chr4g0046371 42.744 634 324 13 51 666 33 645 1.84e-149 452
Msa1347520 MtrunA17_Chr2g0282961 55.283 407 159 8 55 454 52 442 2.26e-142 431
Msa1347520 MtrunA17_Chr8g0385791 47.414 464 224 8 14 472 21 469 3.14e-137 425
Msa1347520 MtrunA17_Chr8g0385791 51.351 74 36 0 676 749 705 778 6.99e-20 95.1
Msa1347520 MtrunA17_Chr2g0276781 52.589 367 159 4 54 418 21 374 2.17e-127 394
Msa1347520 MtrunA17_Chr2g0276781 53.947 76 35 0 673 748 539 614 1.62e-19 93.6
Msa1347520 MtrunA17_Chr5g0433301 49.136 405 171 10 56 452 24 401 1.58e-113 363
Msa1347520 MtrunA17_Chr5g0433301 36.975 119 67 4 634 749 670 783 1.88e-15 80.9
Msa1347520 MtrunA17_Chr2g0285461 51.923 364 161 6 56 416 23 375 4.01e-113 363
Msa1347520 MtrunA17_Chr2g0285461 41.176 102 57 3 648 748 743 842 2.90e-16 83.6
Msa1347520 MtrunA17_Chr8g0346711 49.062 373 173 7 38 408 11 368 7.86e-113 357
Msa1347520 MtrunA17_Chr8g0346711 54.412 68 30 1 681 748 558 624 4.89e-17 85.5
Msa1347520 MtrunA17_Chr3g0109391 53.090 356 145 7 56 404 26 366 2.41e-112 360
Msa1347520 MtrunA17_Chr3g0109391 43.299 97 46 3 661 749 696 791 2.67e-15 80.1
Msa1347520 MtrunA17_Chr8g0376771 50.964 363 165 5 56 416 23 374 3.27e-111 358
Msa1347520 MtrunA17_Chr8g0376771 38.095 105 61 3 647 748 745 848 1.30e-15 81.3
Msa1347520 MtrunA17_Chr1g0156321 52.422 351 152 6 56 403 43 381 4.46e-109 352
Msa1347520 MtrunA17_Chr1g0156321 47.143 70 35 2 681 749 754 822 2.24e-14 77.4
Msa1347520 MtrunA17_Chr4g0009751 49.570 349 160 5 56 402 19 353 4.87e-109 345
Msa1347520 MtrunA17_Chr4g0009751 47.619 84 40 2 665 748 542 621 2.07e-15 80.1
Msa1347520 MtrunA17_Chr7g0239061 45.501 389 194 8 54 439 12 385 8.95e-108 343
Msa1347520 MtrunA17_Chr7g0239061 48.810 84 39 2 665 748 557 636 2.10e-17 86.7
Msa1347520 MtrunA17_Chr4g0070181 52.464 345 152 4 56 399 23 356 4.30e-103 341
Msa1347520 MtrunA17_Chr4g0070181 52.000 75 34 2 676 749 989 1062 2.16e-17 87.0
Msa1347520 MtrunA17_Chr2g0301251 51.304 345 156 4 56 399 23 356 1.54e-101 337
Msa1347520 MtrunA17_Chr2g0301251 52.000 75 34 2 676 749 981 1054 1.42e-16 84.7
Msa1347520 MtrunA17_Chr8g0389081 49.573 351 161 6 56 402 32 370 4.59e-93 313
Msa1347520 MtrunA17_Chr8g0389081 51.429 70 32 2 681 749 985 1053 3.07e-16 83.6
Msa1347520 MtrunA17_Chr2g0326761 41.732 381 168 10 56 398 11 375 6.70e-80 270
Msa1347520 MtrunA17_Chr1g0181211 37.170 417 200 9 56 428 27 425 4.05e-76 259
Msa1347520 MtrunA17_Chr1g0199681 38.144 388 191 6 56 408 94 467 3.66e-73 251
Msa1347520 MtrunA17_Chr4g0028971 38.035 397 186 7 56 408 12 392 3.72e-71 246
Msa1347520 MtrunA17_Chr7g0264171 36.650 412 197 10 56 418 31 427 5.42e-66 230
Msa1347520 MtrunA17_Chr7g0264161 39.241 316 175 7 65 378 1 301 4.42e-60 205
Msa1347520 MtrunA17_Chr3g0115271 36.573 391 194 10 56 406 19 395 5.63e-60 213
Msa1347520 MtrunA17_Chr8g0356211 42.358 229 124 3 176 402 2 224 2.19e-58 201
Msa1347520 MtrunA17_Chr5g0424931 32.603 411 223 11 36 415 2 389 1.42e-55 199
Msa1347520 MtrunA17_Chr5g0417281 34.146 369 207 12 56 416 11 351 6.14e-54 194
Msa1347520 MtrunA17_Chr5g0436761 34.748 377 203 12 56 420 12 357 2.49e-50 183
Msa1347520 MtrunA17_Chr5g0417211 35.342 365 189 15 56 410 12 339 8.49e-49 177
Msa1347520 MtrunA17_Chr2g0289221 33.234 334 180 9 56 378 20 321 5.43e-45 165
Msa1347520 MtrunA17_Chr1g0178011 28.726 369 239 7 56 420 12 360 3.91e-44 165
Msa1347520 MtrunA17_Chr2g0277461 29.091 385 248 8 56 437 13 375 1.39e-40 155
Msa1347520 MtrunA17_Chr5g0424741 30.052 386 224 14 56 408 12 384 2.19e-37 147
Msa1347520 MtrunA17_Chr2g0277531 31.250 336 191 15 51 378 15 318 7.37e-34 132
Msa1347520 MtrunA17_Chr5g0425661 33.014 209 128 3 56 264 37 233 2.20e-32 125
Msa1347520 MtrunA17_Chr5g0424801 28.652 356 223 11 56 402 12 345 1.82e-30 124
Msa1347520 MtrunA17_Chr5g0425261 29.412 357 219 13 56 402 12 345 5.46e-29 119
Msa1347520 MtrunA17_Chr7g0276471 36.111 108 68 1 166 273 116 222 3.67e-11 66.2
Msa1347520 MtrunA17_Chr1g0178071 30.247 162 107 3 167 322 75 236 5.44e-11 64.7
Msa1347520 MtrunA17_Chr8g0345771 36.697 109 67 2 154 262 158 264 6.73e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1347520 AT5G60450.2 58.274 707 256 11 50 749 35 709 0.0 775
Msa1347520 AT5G60450.1 58.321 703 254 11 54 749 63 733 0.0 773
Msa1347520 AT5G62000.2 36.973 806 405 20 14 749 29 801 4.24e-161 488
Msa1347520 AT5G62000.5 36.973 806 405 20 14 749 29 801 4.24e-161 488
Msa1347520 AT5G62000.3 36.973 806 405 20 14 749 29 801 4.24e-161 488
Msa1347520 AT5G62000.1 36.973 806 405 20 14 749 29 801 4.24e-161 488
Msa1347520 AT5G62000.4 36.973 806 405 20 14 749 29 801 5.75e-161 488
Msa1347520 AT2G33860.1 50.104 481 191 10 55 529 53 490 2.74e-148 447
Msa1347520 AT1G59750.4 50.136 367 166 6 56 418 22 375 1.79e-118 371
Msa1347520 AT1G59750.4 55.263 76 34 0 673 748 529 604 4.21e-20 95.9
Msa1347520 AT3G61830.1 47.222 396 186 8 43 430 12 392 2.01e-118 369
Msa1347520 AT3G61830.1 48.052 77 39 1 672 748 480 555 1.83e-15 80.9
Msa1347520 AT1G59750.2 50.136 367 166 6 56 418 22 375 2.03e-118 371
Msa1347520 AT1G59750.2 55.263 76 34 0 673 748 531 606 4.05e-20 95.9
Msa1347520 AT1G59750.1 50.136 367 166 6 56 418 22 375 2.56e-118 371
Msa1347520 AT1G59750.1 55.263 76 34 0 673 748 534 609 4.11e-20 95.9
Msa1347520 AT1G59750.3 50.136 367 166 6 56 418 22 375 2.56e-118 371
Msa1347520 AT1G59750.3 55.263 76 34 0 673 748 534 609 4.11e-20 95.9
Msa1347520 AT2G33860.2 50.413 363 150 5 167 529 1 333 3.37e-113 350
Msa1347520 AT5G37020.2 51.648 364 162 6 56 416 22 374 4.57e-112 358
Msa1347520 AT5G37020.2 51.429 70 32 2 681 749 705 773 1.77e-16 84.3
Msa1347520 AT2G46530.1 47.696 369 174 8 54 418 19 372 8.44e-112 352
Msa1347520 AT2G46530.1 42.308 104 55 2 645 748 458 556 1.85e-17 87.0
Msa1347520 AT5G37020.1 51.648 364 162 6 56 416 22 374 1.77e-111 357
Msa1347520 AT5G37020.1 51.429 70 32 2 681 749 705 773 2.00e-16 84.3
Msa1347520 AT2G46530.3 47.696 369 174 8 54 418 40 393 2.11e-111 351
Msa1347520 AT2G46530.3 42.308 104 55 2 645 748 479 577 2.31e-17 87.0
Msa1347520 AT1G30330.3 49.485 388 168 7 56 426 25 401 2.95e-111 360
Msa1347520 AT1G30330.3 48.148 81 38 3 671 748 784 863 8.68e-17 85.5
Msa1347520 AT1G30330.2 49.485 388 168 7 56 426 25 401 2.95e-111 360
Msa1347520 AT1G30330.2 48.148 81 38 3 671 748 784 863 8.68e-17 85.5
Msa1347520 AT1G30330.1 49.485 388 168 7 56 426 23 399 3.75e-111 359
Msa1347520 AT1G30330.1 48.148 81 38 3 671 748 782 861 9.53e-17 85.5
Msa1347520 AT4G23980.2 49.573 351 155 8 54 399 10 343 1.93e-105 336
Msa1347520 AT4G23980.2 51.316 76 36 1 673 748 513 587 5.10e-17 85.9
Msa1347520 AT4G23980.1 49.573 351 155 8 54 399 10 343 1.99e-105 336
Msa1347520 AT4G23980.1 51.316 76 36 1 673 748 515 589 5.12e-17 85.9
Msa1347520 AT1G19850.2 50.568 352 158 7 56 403 43 382 3.08e-103 337
Msa1347520 AT1G19850.2 46.154 78 40 2 673 749 774 850 9.02e-15 79.0
Msa1347520 AT1G19850.1 50.568 352 158 7 56 403 54 393 3.65e-103 337
Msa1347520 AT1G19850.1 46.154 78 40 2 673 749 785 861 8.77e-15 79.0
Msa1347520 AT3G61830.2 46.957 345 162 6 92 430 12 341 5.59e-103 327
Msa1347520 AT3G61830.2 48.052 77 39 1 672 748 429 504 1.48e-15 80.9
Msa1347520 AT1G19220.1 51.873 347 151 5 56 399 23 356 7.87e-101 335
Msa1347520 AT1G19220.1 53.333 75 33 2 676 749 953 1026 1.26e-17 88.2
Msa1347520 AT5G20730.2 51.297 347 153 5 56 399 24 357 3.31e-98 329
Msa1347520 AT5G20730.2 37.762 143 65 6 610 749 984 1105 6.27e-17 86.3
Msa1347520 AT5G20730.3 51.149 348 153 6 56 399 24 358 8.80e-97 325
Msa1347520 AT5G20730.3 37.762 143 65 6 610 749 985 1106 5.53e-17 86.3
Msa1347520 AT5G20730.1 51.149 348 153 6 56 399 24 358 1.68e-96 324
Msa1347520 AT5G20730.1 37.762 143 65 6 610 749 985 1106 5.96e-17 86.3
Msa1347520 AT1G35540.1 41.892 370 194 6 51 419 22 371 1.24e-90 296
Msa1347520 AT1G35540.1 27.917 240 117 7 515 748 387 576 2.75e-16 83.6
Msa1347520 AT1G34310.1 41.240 371 196 7 51 417 22 374 5.02e-88 289
Msa1347520 AT1G34310.1 46.392 97 50 2 653 748 482 577 4.52e-18 89.0
Msa1347520 AT1G34410.1 40.323 372 198 8 51 417 22 374 1.01e-86 286
Msa1347520 AT1G34410.1 50.000 76 37 1 673 748 503 577 1.08e-15 81.6
Msa1347520 AT5G37020.3 54.651 258 115 2 160 416 23 279 3.07e-86 288
Msa1347520 AT5G37020.3 51.429 70 32 2 681 749 610 678 1.80e-16 84.3
Msa1347520 AT1G35240.1 41.463 369 195 7 51 418 22 370 3.75e-86 284
Msa1347520 AT1G35240.1 48.684 76 38 1 673 748 489 563 2.70e-15 80.1
Msa1347520 AT1G34170.1 40.214 373 199 8 54 423 23 374 5.82e-86 281
Msa1347520 AT1G35520.1 41.463 369 195 7 51 418 22 370 7.19e-85 281
Msa1347520 AT1G35520.1 44.330 97 52 2 653 748 482 577 1.00e-16 84.7
Msa1347520 AT1G34390.1 41.667 384 198 10 51 430 22 383 2.24e-83 277
Msa1347520 AT1G34390.1 44.330 97 52 2 653 748 480 575 6.35e-16 82.4
Msa1347520 AT2G46530.2 48.659 261 128 4 160 418 29 285 8.72e-82 270
Msa1347520 AT2G46530.2 42.308 104 55 2 645 748 371 469 1.31e-17 87.0
Msa1347520 AT2G28350.2 39.036 415 198 7 56 428 10 411 3.84e-81 273
Msa1347520 AT2G28350.1 39.036 415 198 7 56 428 10 411 5.47e-81 273
Msa1347520 AT4G30080.1 39.031 392 187 8 56 410 19 395 7.73e-79 266
Msa1347520 AT1G34170.2 38.070 373 181 8 54 423 23 348 1.75e-74 249
Msa1347520 AT1G34170.3 38.070 373 181 8 54 423 23 348 1.89e-73 249
Msa1347520 AT1G34170.3 39.759 83 42 2 673 748 418 499 1.53e-11 68.2
Msa1347520 AT1G77850.2 33.000 400 214 8 57 420 20 401 1.19e-55 201
Msa1347520 AT1G77850.1 29.668 482 277 10 57 502 20 475 1.24e-55 201
Msa1347520 AT1G43950.1 44.037 218 104 5 51 267 22 222 2.93e-49 173
Msa1347520 AT2G46870.1 32.353 170 93 6 143 309 10 160 7.93e-12 67.4
Msa1347520 AT4G01500.1 38.043 92 54 1 166 257 34 122 9.80e-12 67.4
Msa1347520 AT1G01030.2 36.735 98 61 1 160 257 48 144 1.21e-11 67.4
Msa1347520 AT1G01030.1 36.735 98 61 1 160 257 48 144 1.47e-11 67.4
Msa1347520 AT1G13260.1 34.711 121 75 2 149 265 167 287 2.87e-11 66.2

Find 180 sgRNAs with CRISPR-Local

Find 278 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTATAGCTGACCTTCTTTC+TGG 0.139715 tig0009838:-14327 Msa1347520:intergenic
GTAAATCCTTGTAGACTATT+TGG 0.158429 tig0009838:+15603 Msa1347520:CDS
AACCTCATCATTCTCCTTAT+TGG 0.160497 tig0009838:-12726 Msa1347520:intergenic
AGCCAAAAGAATCTTGTTTC+TGG 0.202166 tig0009838:+13793 Msa1347520:CDS
AACATTCTCTAGTTGGAAAT+TGG 0.212031 tig0009838:-15418 Msa1347520:intergenic
AGAAATGAAGTTGGAATATC+AGG 0.255023 tig0009838:+15477 Msa1347520:CDS
AGCTGGAGACAGTGGGTTTA+TGG 0.268758 tig0009838:+14933 Msa1347520:intron
ACTACAACATTCCCTTTCTT+TGG 0.271823 tig0009838:-12465 Msa1347520:intergenic
TTCTTTGGAAGTGATGTTAA+AGG 0.285859 tig0009838:-12450 Msa1347520:intergenic
CCTGCAGCTTCTGCTTGTTT+CGG 0.298110 tig0009838:-15509 Msa1347520:intergenic
TTTGACTTGGGCCATTTATA+GGG 0.298149 tig0009838:-14455 Msa1347520:intergenic
CTTCATCTTATCTTGAACTA+TGG 0.312250 tig0009838:+12412 Msa1347520:CDS
CCCCAGAAACAAGATTCTTT+TGG 0.320379 tig0009838:-13795 Msa1347520:intergenic
AAACTTAACTTTCACTCATT+AGG 0.322689 tig0009838:+15309 Msa1347520:CDS
AGTGAACTAGAGAGACTATT+TGG 0.331029 tig0009838:+15864 Msa1347520:CDS
GTGATTTGGATCCCTATAAA+TGG 0.335220 tig0009838:+14444 Msa1347520:CDS
TTTCCATTAACAGGCCAATA+AGG 0.336836 tig0009838:+12712 Msa1347520:intron
CGGAAACGAACCGGTTTCCT+AGG 0.350274 tig0009838:+15166 Msa1347520:CDS
TAGTTGGAAATTGGTTGGTT+TGG 0.350673 tig0009838:-15409 Msa1347520:intergenic
TGGTTACCAACAATTGATTC+AGG 0.358579 tig0009838:-14010 Msa1347520:intergenic
TCATTGGAAATTCCAACATA+TGG 0.359232 tig0009838:+12540 Msa1347520:CDS
TTCACCTACCTCGATAAATA+TGG 0.367329 tig0009838:-13646 Msa1347520:intergenic
ATTCAAAATGAAATTTGAAA+TGG 0.374517 tig0009838:+14296 Msa1347520:CDS
TTGATCTAAACCTTAACTCT+TGG 0.379579 tig0009838:+15238 Msa1347520:CDS
CCACCTGCTTCTAAACCTTC+AGG 0.382333 tig0009838:-13192 Msa1347520:intergenic
ATAAATGGCCCAAGTCAAAA+TGG 0.382489 tig0009838:+14459 Msa1347520:CDS
GCCAAAAGAATCTTGTTTCT+GGG 0.385570 tig0009838:+13794 Msa1347520:CDS
GGGACGCAGTGCTCTTTCTA+AGG 0.386238 tig0009838:+13815 Msa1347520:CDS
TGATCTAAACCTTAACTCTT+GGG 0.391011 tig0009838:+15239 Msa1347520:CDS
TAAATGAAACATTCTCTAGT+TGG 0.401148 tig0009838:-15425 Msa1347520:intergenic
CACAAACAAGGGAGCTTAGT+TGG 0.402834 tig0009838:+15795 Msa1347520:CDS
ATGTGAGAAGCTAACTTTGT+AGG 0.405019 tig0009838:-13234 Msa1347520:intergenic
TGACAGTGAAAATGACATTA+TGG 0.405346 tig0009838:+15938 Msa1347520:CDS
TCAGTTAGCAGGGATGTGTT+TGG 0.410443 tig0009838:+13158 Msa1347520:intron
GGTTTAGAAGCAGGTGGAGA+GGG 0.411642 tig0009838:+13198 Msa1347520:CDS
ATTTCTGCTGCTGCTTCTCT+AGG 0.415866 tig0009838:+15537 Msa1347520:CDS
TTGGTAAGGCACAACGAAAT+CGG 0.417321 tig0009838:-14229 Msa1347520:intergenic
CATACTAATCTTGCATCAAA+TGG 0.420961 tig0009838:+15081 Msa1347520:CDS
TAATGAGTGAAAGTTAAGTT+TGG 0.421167 tig0009838:-15307 Msa1347520:intergenic
GATTCAGGAAGACCGTTTCT+CGG 0.422054 tig0009838:-13995 Msa1347520:intergenic
TTAACATCACTTCCAAAGAA+AGG 0.425871 tig0009838:+12453 Msa1347520:CDS
TTGTGTTGCATTCAGTTAGC+AGG 0.431661 tig0009838:+13147 Msa1347520:intron
GTCAAAATGGAGATGCTTGA+TGG 0.432058 tig0009838:+14472 Msa1347520:CDS
AAAATGACATTATGGTTGTT+GGG 0.432406 tig0009838:+15946 Msa1347520:CDS
AGGATTCTCCATCCTTTGTC+AGG 0.432653 tig0009838:-15914 Msa1347520:intergenic
AATACTCCTTCAGCTCAGAT+AGG 0.438938 tig0009838:+15447 Msa1347520:CDS
TTCTAGTTATGCAGACTTCA+CGG 0.440375 tig0009838:+15146 Msa1347520:CDS
GAACTATGGCATGCTTGTGC+TGG 0.440943 tig0009838:+12426 Msa1347520:CDS
CAGACTTCACGGAAACGAAC+CGG 0.444346 tig0009838:+15157 Msa1347520:CDS
TTAGATCAACCTTTCCTGCC+AGG 0.450136 tig0009838:-15224 Msa1347520:intergenic
AGTGACTGGAATGAGTGATT+TGG 0.450736 tig0009838:+14430 Msa1347520:CDS
TTCTTGACCTTGCAAGACCT+TGG 0.450899 tig0009838:-14980 Msa1347520:intergenic
TCGACAAGATTGAATGTTCA+AGG 0.452440 tig0009838:-14772 Msa1347520:intergenic
ATCAAGATAGAGTCTCTCCT+TGG 0.455503 tig0009838:+14721 Msa1347520:CDS
GGTCTTCCTGAATCAATTGT+TGG 0.457519 tig0009838:+14004 Msa1347520:CDS
TTGGATTCATACCAGTGATA+AGG 0.459048 tig0009838:-14842 Msa1347520:intergenic
GCCTCTGATACCAGCACTCA+TGG 0.459057 tig0009838:+13276 Msa1347520:CDS
GTGAAGTCTGCATAACTAGA+AGG 0.460590 tig0009838:-15144 Msa1347520:intergenic
ACACTAAGGATAAATTAGTC+TGG 0.461842 tig0009838:-12113 Msa1347520:intergenic
AAAAGTATGCTAAAAGCATC+AGG 0.463277 tig0009838:+14250 Msa1347520:CDS
TAAGTTTGGTTGCATTATGC+AGG 0.464035 tig0009838:-15293 Msa1347520:intergenic
GAAGCAGGTGGAGAGGGAGA+TGG 0.465289 tig0009838:+13204 Msa1347520:CDS
ACAACCCTACAAAAGATTTG+TGG 0.468787 tig0009838:-12570 Msa1347520:intergenic
GGTGGTTTCCGCCGCCGATA+AGG 0.472069 tig0009838:-15631 Msa1347520:intergenic
TAACATCACTTCCAAAGAAA+GGG 0.474815 tig0009838:+12454 Msa1347520:CDS
GTAGTGAGCAGATGCCTCCT+TGG 0.475837 tig0009838:-13751 Msa1347520:intergenic
TTCTCTAGTTGGAAATTGGT+TGG 0.476906 tig0009838:-15414 Msa1347520:intergenic
ACTTTGTGTATATCACCATA+TGG 0.477775 tig0009838:-15360 Msa1347520:intergenic
TGAAGATACAAGAGCTGAAG+TGG 0.479905 tig0009838:-12394 Msa1347520:intergenic
GAAAATGACATTATGGTTGT+TGG 0.484036 tig0009838:+15945 Msa1347520:CDS
CTTGCAAGACCCTAGGAAAC+CGG 0.485163 tig0009838:-15176 Msa1347520:intergenic
TCCTAGTTTCCTTTCTTCAG+TGG 0.491250 tig0009838:+14042 Msa1347520:CDS
TTTAGTAAAACTTACTGCCA+TGG 0.494050 tig0009838:-15980 Msa1347520:intergenic
TACTTTGCTTCCACAGGCAG+AGG 0.504284 tig0009838:+12760 Msa1347520:CDS
AGGAGGCATCTGCTCACTAC+TGG 0.505121 tig0009838:+13754 Msa1347520:CDS
CATACCAGTGATAAGGTGAC+TGG 0.506398 tig0009838:-14835 Msa1347520:intergenic
GGCATCTGCTCACTACTGGC+TGG 0.509364 tig0009838:+13758 Msa1347520:CDS
TATATCACCATATGGAAAAG+AGG 0.512064 tig0009838:-15352 Msa1347520:intergenic
ATCTTGTCCCTATGGTCAGT+GGG 0.513478 tig0009838:-14275 Msa1347520:intergenic
GAGCCTGAAGGTTTAGAAGC+AGG 0.515631 tig0009838:+13189 Msa1347520:CDS
GTGATATTACACAGGTCCGA+TGG 0.515735 tig0009838:+14676 Msa1347520:intron
ATAATTTGTGTAACTAACAT+TGG 0.517422 tig0009838:-15268 Msa1347520:intergenic
AATCTTGTCCCTATGGTCAG+TGG 0.518063 tig0009838:-14276 Msa1347520:intergenic
ATTGAGCAGCTACAATGATC+TGG 0.518918 tig0009838:+15839 Msa1347520:CDS
TGAAAACGGAGAGTTAAGAT+TGG 0.519467 tig0009838:+13952 Msa1347520:CDS
AGAGCTGCTCGACCGAGAAA+CGG 0.520377 tig0009838:+13983 Msa1347520:CDS
TAAGAGATCCTGACAAAGGA+TGG 0.521003 tig0009838:+15901 Msa1347520:CDS
CTTCTCTAGGTGCAAACTTG+AGG 0.522379 tig0009838:+15550 Msa1347520:CDS
GAATTTCCAATGAAGAAAAG+AGG 0.523333 tig0009838:-12530 Msa1347520:intergenic
ATTGAGATCCCTGGCAGGAA+AGG 0.523346 tig0009838:+15215 Msa1347520:CDS
TCTTGACCTTGCAAGACCCT+AGG 0.523482 tig0009838:-15183 Msa1347520:intergenic
GGTGCATTGAGAAATGAAGT+TGG 0.523787 tig0009838:+15468 Msa1347520:CDS
CTGGTTGTTATAATGAGTCT+CGG 0.531631 tig0009838:-12094 Msa1347520:intergenic
TCTCTATGTAGGGGTGAAAA+CGG 0.532577 tig0009838:+13938 Msa1347520:intron
TCAAGATAGAGTCTCTCCTT+GGG 0.533378 tig0009838:+14722 Msa1347520:CDS
TGAATGAAGGTTCACAAACA+AGG 0.534840 tig0009838:+15783 Msa1347520:intron
TCAGGAACCCACTGACCATA+GGG 0.535798 tig0009838:+14268 Msa1347520:CDS
TAGCATTAGCCACTGAAGAA+AGG 0.540509 tig0009838:-14051 Msa1347520:intergenic
ATTCTTCTTAACTTGAGTTG+TGG 0.542039 tig0009838:-12283 Msa1347520:intergenic
CCGAAACAAGCAGAAGCTGC+AGG 0.542656 tig0009838:+15509 Msa1347520:CDS
ACAGGTTACTTTGCTTCCAC+AGG 0.543725 tig0009838:+12754 Msa1347520:CDS
TAGATCAACCTTTCCTGCCA+GGG 0.544208 tig0009838:-15223 Msa1347520:intergenic
TGTAGTAGCGGTATAGTGAC+TGG 0.545183 tig0009838:+14416 Msa1347520:CDS
TATGGTGATATACACAAAGT+TGG 0.548146 tig0009838:+15363 Msa1347520:CDS
GAAAACGGAGAGTTAAGATT+GGG 0.548310 tig0009838:+13953 Msa1347520:CDS
TGGATGAATCTCCAGAAAGA+AGG 0.548781 tig0009838:+14316 Msa1347520:CDS
TTTCCTGCCAGGGATCTCAA+TGG 0.549270 tig0009838:-15213 Msa1347520:intergenic
GAGAGACTATTTGGCATGGA+AGG 0.550692 tig0009838:+15873 Msa1347520:CDS
GCTCAATCTTGAGAGATCAA+TGG 0.551608 tig0009838:-15828 Msa1347520:intergenic
CCTCGATATAAGAGTGTCAA+AGG 0.552638 tig0009838:-12061 Msa1347520:intergenic
AATATATCCATTGAGATCCC+TGG 0.553252 tig0009838:+15206 Msa1347520:CDS
AGGCTGAAGAAACTGCGGAC+GGG 0.554562 tig0009838:+14795 Msa1347520:CDS
TACACAGGTCCGATGGGATG+AGG 0.555224 tig0009838:+14683 Msa1347520:intron
GGAAACTAGGAGAACAACTC+TGG 0.556326 tig0009838:-14030 Msa1347520:intergenic
TGAACATTCAATCTTGTCGA+AGG 0.558866 tig0009838:+14775 Msa1347520:CDS
AGGCTGAACCCTCGTAAACT+CGG 0.559216 tig0009838:-15124 Msa1347520:intergenic
AGAAAACCCTCCATGAGTGC+TGG 0.560225 tig0009838:-13286 Msa1347520:intergenic
TGTGTTGCATTCAGTTAGCA+GGG 0.565461 tig0009838:+13148 Msa1347520:intron
GAAAATCCAAATAGTCTACA+AGG 0.566058 tig0009838:-15609 Msa1347520:intergenic
TGTGGTTGAAGACCATATGT+TGG 0.568873 tig0009838:-12552 Msa1347520:intergenic
CCAAAAGAATCTTGTTTCTG+GGG 0.569533 tig0009838:+13795 Msa1347520:CDS
TGATATTACACAGGTCCGAT+GGG 0.571325 tig0009838:+14677 Msa1347520:intron
AAGAAGAATACATGTTGCAA+TGG 0.571777 tig0009838:+12297 Msa1347520:CDS
CCGATGGGATGAGGATATTG+AGG 0.572780 tig0009838:+14692 Msa1347520:CDS
GCCACTGAAGAAAGGAAACT+AGG 0.575196 tig0009838:-14043 Msa1347520:intergenic
CGACAAGATTGAATGTTCAA+GGG 0.577787 tig0009838:-14771 Msa1347520:intergenic
TGGTTGTTGGGGATGATCCA+TGG 0.581281 tig0009838:+15958 Msa1347520:CDS
TCACCCAGTCACCTTATCAC+TGG 0.584443 tig0009838:+14831 Msa1347520:CDS
ATCAGGAACCCACTGACCAT+AGG 0.589785 tig0009838:+14267 Msa1347520:CDS
TATCCATTGAGATCCCTGGC+AGG 0.592828 tig0009838:+15210 Msa1347520:CDS
AATTTCCAATGAAGAAAAGA+GGG 0.594214 tig0009838:-12529 Msa1347520:intergenic
TTCATCGCAGCTGGAGACAG+TGG 0.594260 tig0009838:+14925 Msa1347520:intron
AGGTTTAGAAGCAGGTGGAG+AGG 0.594537 tig0009838:+13197 Msa1347520:CDS
ATTTCCACTCCACACCATGC+AGG 0.596067 tig0009838:-13619 Msa1347520:intergenic
TCATCGCAGCTGGAGACAGT+GGG 0.597361 tig0009838:+14926 Msa1347520:intron
AATGCACCTATCTGAGCTGA+AGG 0.597701 tig0009838:-15453 Msa1347520:intergenic
CGGTTTCCTAGGGTCTTGCA+AGG 0.598452 tig0009838:+15177 Msa1347520:CDS
AATCTTTGTCAGGTCAGCCA+AGG 0.599067 tig0009838:+13734 Msa1347520:intron
AAGATTGAATGTTCAAGGGA+GGG 0.602810 tig0009838:-14767 Msa1347520:intergenic
TCCATGAGTGCTGGTATCAG+AGG 0.602998 tig0009838:-13277 Msa1347520:intergenic
TTACTTCTTCCGAGTTTACG+AGG 0.603395 tig0009838:+15115 Msa1347520:CDS
GATATACACAAAGTTGGTCA+AGG 0.608483 tig0009838:+15369 Msa1347520:CDS
GATCTAAACCTTAACTCTTG+GGG 0.609198 tig0009838:+15240 Msa1347520:CDS
AAATGACATTATGGTTGTTG+GGG 0.611574 tig0009838:+15947 Msa1347520:CDS
TTTGCAACAAGCTCTTGAGA+GGG 0.613596 tig0009838:-13593 Msa1347520:intergenic
CCTTTGACACTCTTATATCG+AGG 0.613881 tig0009838:+12061 Msa1347520:five_prime_UTR
GGAAACGAACCGGTTTCCTA+GGG 0.618178 tig0009838:+15167 Msa1347520:CDS
AGATCGACCAAGGTCTTGCA+AGG 0.618905 tig0009838:+14973 Msa1347520:CDS
TGTCATACTCATACCAAAGG+AGG 0.620459 tig0009838:-13339 Msa1347520:intergenic
CTGATACCAGCACTCATGGA+GGG 0.625106 tig0009838:+13280 Msa1347520:CDS
CCTCAATATCCTCATCCCAT+CGG 0.625293 tig0009838:-14692 Msa1347520:intergenic
ATAAAACCTACCTCTGCCTG+TGG 0.625761 tig0009838:-12770 Msa1347520:intergenic
CTTTGTCAGGTCAGCCAAGG+AGG 0.625815 tig0009838:+13737 Msa1347520:intron
ACTTGTTCCAAATGACCTTG+TGG 0.628653 tig0009838:-12495 Msa1347520:intergenic
TTGGATGACAAAGAGCCTGA+AGG 0.629150 tig0009838:+13177 Msa1347520:CDS
GAATGAAGGTTCACAAACAA+GGG 0.629502 tig0009838:+15784 Msa1347520:intron
CAAGATTGAATGTTCAAGGG+AGG 0.630768 tig0009838:-14768 Msa1347520:intergenic
ACTAGAGAGACTATTTGGCA+TGG 0.631155 tig0009838:+15869 Msa1347520:CDS
TACTTCTTCCGAGTTTACGA+GGG 0.633533 tig0009838:+15116 Msa1347520:CDS
CCTGAAGGTTTAGAAGCAGG+TGG 0.635598 tig0009838:+13192 Msa1347520:CDS
AAGGGAGGGAGAGAAGTAGA+CGG 0.635894 tig0009838:-14753 Msa1347520:intergenic
GAATGATGAGGTTTACACAC+AGG 0.638216 tig0009838:+12736 Msa1347520:CDS
TGCAAAAGACCTGCATGGTG+TGG 0.639765 tig0009838:+13610 Msa1347520:CDS
AAGACCTGCATGGTGTGGAG+TGG 0.642527 tig0009838:+13615 Msa1347520:CDS
ATGTCTTGCAGGTGTAGTAG+CGG 0.648254 tig0009838:+14404 Msa1347520:intron
CTTCTAAGAGATCCTGACAA+AGG 0.649192 tig0009838:+15897 Msa1347520:CDS
AAGGCTGAAGAAACTGCGGA+CGG 0.656866 tig0009838:+14794 Msa1347520:CDS
TGCTAAAAGAAGTTGCACGA+AGG 0.662737 tig0009838:+15674 Msa1347520:CDS
AAATTTCGCCATATTTATCG+AGG 0.663380 tig0009838:+13638 Msa1347520:CDS
GTAGACGGATCGATCTCCCA+AGG 0.663808 tig0009838:-14738 Msa1347520:intergenic
GGCCAATAAGGAGAATGATG+AGG 0.666485 tig0009838:+12724 Msa1347520:intron
ATACCAGTGATAAGGTGACT+GGG 0.667650 tig0009838:-14834 Msa1347520:intergenic
AAACTGCGAGAAAATTGTGA+GGG 0.670150 tig0009838:+12150 Msa1347520:five_prime_UTR
GTCGAAGGCTGAAGAAACTG+CGG 0.672621 tig0009838:+14790 Msa1347520:CDS
GAACTAGAAGATGAACATGC+TGG 0.678927 tig0009838:-12372 Msa1347520:intergenic
TAAACTGCGAGAAAATTGTG+AGG 0.681112 tig0009838:+12149 Msa1347520:five_prime_UTR
CAATCTTCAGCAGCTCGACG+AGG 0.685556 tig0009838:-13312 Msa1347520:intergenic
TCTGATACCAGCACTCATGG+AGG 0.685802 tig0009838:+13279 Msa1347520:CDS
TGAGTCTATAAGATCGACCA+AGG 0.694503 tig0009838:+14963 Msa1347520:CDS
CTTGTTGCAAAAGACCTGCA+TGG 0.711702 tig0009838:+13605 Msa1347520:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTAGATATTATTTTTTGT+CGG - tig0009838:12038-12057 Msa0896450:intergenic 10.0%
!! AACATATTAAATATACATGT+GGG - tig0009838:14179-14198 Msa1347520:intergenic 15.0%
!! AAACATATTAAATATACATG+TGG - tig0009838:14180-14199 Msa1347520:intergenic 15.0%
!! ATTCAAAATGAAATTTGAAA+TGG + tig0009838:14296-14315 Msa1347520:CDS 15.0%
!! TATTAATGTAATGTTTAGAA+AGG - tig0009838:14612-14631 Msa1347520:intergenic 15.0%
!!! TGTATATTTTTTCCATTAAC+AGG + tig0009838:12703-12722 Msa1347520:intron 20.0%
!!! GTTTTATGGTTTAACATATT+TGG + tig0009838:12786-12805 Msa1347520:intron 20.0%
!!! ATTTCTTTTTTGATGCATTT+TGG + tig0009838:12813-12832 Msa1347520:intron 20.0%
!!! GTTTGGTTTTCATTAAAAAT+TGG + tig0009838:12835-12854 Msa1347520:intron 20.0%
!!! AGTTTTATGTCACTATATTA+TGG + tig0009838:15009-15028 Msa1347520:CDS 20.0%
!!! ATAATTTGTGTAACTAACAT+TGG - tig0009838:15271-15290 Msa1347520:intergenic 20.0%
!! ATTCATATCACAATATAACT+CGG - tig0009838:15716-15735 Msa1347520:intergenic 20.0%
!! ATGTAATATACAATGAATGA+AGG + tig0009838:15770-15789 Msa1347520:intron 20.0%
!! TTTTTGTCGGATACTAAATT+GGG - tig0009838:12025-12044 Msa0896450:intergenic 25.0%
!!! TTTTTTGTCGGATACTAAAT+TGG - tig0009838:12026-12045 Msa0896450:intergenic 25.0%
!!! AGTCTGATATTTTTACACTA+AGG - tig0009838:12130-12149 Msa1347520:intergenic 25.0%
!!! TTAACACCAACAATGTTTTT+TGG - tig0009838:12242-12261 Msa1347520:intergenic 25.0%
!!! AAAAACATTGTTGGTGTTAA+TGG + tig0009838:12242-12261 Msa1347520:exon 25.0%
! AATTTCCAATGAAGAAAAGA+GGG - tig0009838:12532-12551 Msa1347520:intergenic 25.0%
!!! TTTTTTGATGCATTTTGGTT+TGG + tig0009838:12818-12837 Msa1347520:intron 25.0%
!! CATTAAAAATTGGCAAGTTT+TGG + tig0009838:12845-12864 Msa1347520:intron 25.0%
! TCATGTATAACACTAGTATT+TGG - tig0009838:13080-13099 Msa1347520:intergenic 25.0%
!!! CTGTTTATTTTCACTTCTTT+AGG + tig0009838:13553-13572 Msa1347520:intron 25.0%
! TGAAACAGAAATATTGTGAT+TGG + tig0009838:13665-13684 Msa1347520:intron 25.0%
!!! TTTCTTGTTTTGCAAAATGT+TGG + tig0009838:14136-14155 Msa1347520:intron 25.0%
! ATGTTGTAGAATACAGATAA+TGG - tig0009838:14372-14391 Msa1347520:intergenic 25.0%
! TTACGATCGTATTATACATT+TGG + tig0009838:14537-14556 Msa1347520:intron 25.0%
! ATTTAGTTATCTCGTACATT+TGG - tig0009838:14864-14883 Msa1347520:intergenic 25.0%
! TAATGAGTGAAAGTTAAGTT+TGG - tig0009838:15310-15329 Msa1347520:intergenic 25.0%
! AAACTTAACTTTCACTCATT+AGG + tig0009838:15309-15328 Msa1347520:CDS 25.0%
! TAAATGAAACATTCTCTAGT+TGG - tig0009838:15428-15447 Msa1347520:intergenic 25.0%
!! ACTATTTGGATTTTCCTTAT+CGG + tig0009838:15617-15636 Msa1347520:CDS 25.0%
! ATTGTATATTACATATGCGT+TGG - tig0009838:15764-15783 Msa1347520:intergenic 25.0%
! AAAATGACATTATGGTTGTT+GGG + tig0009838:15946-15965 Msa1347520:CDS 25.0%
ACACTAAGGATAAATTAGTC+TGG - tig0009838:12116-12135 Msa1347520:intergenic 30.0%
AACCAACCAAAAAACATTGT+TGG + tig0009838:12233-12252 Msa1347520:five_prime_UTR 30.0%
! ATTCTTCTTAACTTGAGTTG+TGG - tig0009838:12286-12305 Msa1347520:intergenic 30.0%
AAGAAGAATACATGTTGCAA+TGG + tig0009838:12297-12316 Msa1347520:CDS 30.0%
CTTCATCTTATCTTGAACTA+TGG + tig0009838:12412-12431 Msa1347520:CDS 30.0%
! TTCTTTGGAAGTGATGTTAA+AGG - tig0009838:12453-12472 Msa1347520:intergenic 30.0%
TTAACATCACTTCCAAAGAA+AGG + tig0009838:12453-12472 Msa1347520:CDS 30.0%
TAACATCACTTCCAAAGAAA+GGG + tig0009838:12454-12473 Msa1347520:CDS 30.0%
!! GTTGTAGTTTATTTTCCACA+AGG + tig0009838:12480-12499 Msa1347520:CDS 30.0%
! TTATTTTCCACAAGGTCATT+TGG + tig0009838:12488-12507 Msa1347520:CDS 30.0%
GAATTTCCAATGAAGAAAAG+AGG - tig0009838:12533-12552 Msa1347520:intergenic 30.0%
TCATTGGAAATTCCAACATA+TGG + tig0009838:12540-12559 Msa1347520:CDS 30.0%
! TTCAACCACAAATCTTTTGT+AGG + tig0009838:12565-12584 Msa1347520:CDS 30.0%
! TCAACCACAAATCTTTTGTA+GGG + tig0009838:12566-12585 Msa1347520:CDS 30.0%
TGATACACATCATTGATGAA+TGG + tig0009838:12943-12962 Msa1347520:intron 30.0%
!!! TTTTTTGAGTTCAGCTATTG+AGG - tig0009838:13008-13027 Msa1347520:intergenic 30.0%
AGATTCATAGTTACCTTATG+AGG - tig0009838:13128-13147 Msa1347520:intergenic 30.0%
! GCTTATTTGAGTTTATCTAC+TGG + tig0009838:13382-13401 Msa1347520:intron 30.0%
! ATTTTCTGACCTGAAATTGT+TGG + tig0009838:13506-13525 Msa1347520:intron 30.0%
AAATTTCGCCATATTTATCG+AGG + tig0009838:13638-13657 Msa1347520:CDS 30.0%
ACAGAAATATTGTGATTGGT+TGG + tig0009838:13669-13688 Msa1347520:intron 30.0%
!! AACATGAAACATGCTTTTTG+CGG - tig0009838:14080-14099 Msa1347520:intergenic 30.0%
! CTTTTAGCATACTTTTGGTA+AGG - tig0009838:14246-14265 Msa1347520:intergenic 30.0%
! TGATGCTTTTAGCATACTTT+TGG - tig0009838:14251-14270 Msa1347520:intergenic 30.0%
!! AAAAGTATGCTAAAAGCATC+AGG + tig0009838:14250-14269 Msa1347520:CDS 30.0%
! ATATCATTTTCATGTCTTGC+AGG + tig0009838:14393-14412 Msa1347520:intron 30.0%
TTGATTAAGCTCTCATCATT+TGG - tig0009838:14644-14663 Msa1347520:intergenic 30.0%
TTAGGACACAATAAGTTTAG+TGG - tig0009838:14895-14914 Msa1347520:intergenic 30.0%
CATACTAATCTTGCATCAAA+TGG + tig0009838:15081-15100 Msa1347520:CDS 30.0%
TTGATCTAAACCTTAACTCT+TGG + tig0009838:15238-15257 Msa1347520:CDS 30.0%
TGATCTAAACCTTAACTCTT+GGG + tig0009838:15239-15258 Msa1347520:CDS 30.0%
! CAAAATTCCTCTTTTCCATA+TGG + tig0009838:15345-15364 Msa1347520:CDS 30.0%
TATATCACCATATGGAAAAG+AGG - tig0009838:15355-15374 Msa1347520:intergenic 30.0%
ACTTTGTGTATATCACCATA+TGG - tig0009838:15363-15382 Msa1347520:intergenic 30.0%
TATGGTGATATACACAAAGT+TGG + tig0009838:15363-15382 Msa1347520:CDS 30.0%
AACATTCTCTAGTTGGAAAT+TGG - tig0009838:15421-15440 Msa1347520:intergenic 30.0%
AGAAATGAAGTTGGAATATC+AGG + tig0009838:15477-15496 Msa1347520:CDS 30.0%
GTAAATCCTTGTAGACTATT+TGG + tig0009838:15603-15622 Msa1347520:CDS 30.0%
GAAAATCCAAATAGTCTACA+AGG - tig0009838:15612-15631 Msa1347520:intergenic 30.0%
TGACAGTGAAAATGACATTA+TGG + tig0009838:15938-15957 Msa1347520:CDS 30.0%
GAAAATGACATTATGGTTGT+TGG + tig0009838:15945-15964 Msa1347520:CDS 30.0%
AAATGACATTATGGTTGTTG+GGG + tig0009838:15947-15966 Msa1347520:CDS 30.0%
CTGGTTGTTATAATGAGTCT+CGG - tig0009838:12097-12116 Msa1347520:intergenic 35.0%
TAAACTGCGAGAAAATTGTG+AGG + tig0009838:12149-12168 Msa1347520:five_prime_UTR 35.0%
AAACTGCGAGAAAATTGTGA+GGG + tig0009838:12150-12169 Msa1347520:five_prime_UTR 35.0%
!! TTTTGGTTGGTTCTTCTCTT+AGG - tig0009838:12225-12244 Msa1347520:intergenic 35.0%
!!! CACCAACAATGTTTTTTGGT+TGG - tig0009838:12238-12257 Msa1347520:intergenic 35.0%
ACTACAACATTCCCTTTCTT+TGG - tig0009838:12468-12487 Msa1347520:intergenic 35.0%
! TTTGTCCCTCTTTTCTTCAT+TGG + tig0009838:12524-12543 Msa1347520:CDS 35.0%
ACAACCCTACAAAAGATTTG+TGG - tig0009838:12573-12592 Msa1347520:intergenic 35.0%
TTTCCATTAACAGGCCAATA+AGG + tig0009838:12712-12731 Msa1347520:intron 35.0%
AACCTCATCATTCTCCTTAT+TGG - tig0009838:12729-12748 Msa1347520:intergenic 35.0%
TCATAGTTACCTTATGAGGT+AGG - tig0009838:13124-13143 Msa1347520:intergenic 35.0%
ATGTGAGAAGCTAACTTTGT+AGG - tig0009838:13237-13256 Msa1347520:intergenic 35.0%
! TGAAGATTGTTTTCCTCCTT+TGG + tig0009838:13326-13345 Msa1347520:CDS 35.0%
TAGTGTCATACTCATACCAA+AGG - tig0009838:13345-13364 Msa1347520:intergenic 35.0%
TATGACACTATGAGTCTGTT+TGG + tig0009838:13355-13374 Msa1347520:intron 35.0%
TACATACTTGTGACACTGTT+TGG + tig0009838:13407-13426 Msa1347520:intron 35.0%
TCGAACTTTCCAACAATTTC+AGG - tig0009838:13518-13537 Msa1347520:intergenic 35.0%
GAAATTGTTGGAAAGTTCGA+AGG + tig0009838:13518-13537 Msa1347520:intron 35.0%
TTCACCTACCTCGATAAATA+TGG - tig0009838:13649-13668 Msa1347520:intergenic 35.0%
TCCATGTTGTAATCTTTGTC+AGG + tig0009838:13724-13743 Msa1347520:intron 35.0%
ACCTGACAAAGATTACAACA+TGG - tig0009838:13728-13747 Msa1347520:intergenic 35.0%
! AGCCAAAAGAATCTTGTTTC+TGG + tig0009838:13793-13812 Msa1347520:CDS 35.0%
! GCCAAAAGAATCTTGTTTCT+GGG + tig0009838:13794-13813 Msa1347520:CDS 35.0%
!! CCAAAAGAATCTTGTTTCTG+GGG + tig0009838:13795-13814 Msa1347520:CDS 35.0%
! TGAACTGAGAGCTTTTGAAT+TGG + tig0009838:13851-13870 Msa1347520:intron 35.0%
TGAAAACGGAGAGTTAAGAT+TGG + tig0009838:13952-13971 Msa1347520:CDS 35.0%
GAAAACGGAGAGTTAAGATT+GGG + tig0009838:13953-13972 Msa1347520:CDS 35.0%
! TGGTTACCAACAATTGATTC+AGG - tig0009838:14013-14032 Msa1347520:intergenic 35.0%
! TTCATGTTTTCTACAGTCCA+AGG + tig0009838:14092-14111 Msa1347520:CDS 35.0%
! CATTTTGAATCTTGTCCCTA+TGG - tig0009838:14286-14305 Msa1347520:intergenic 35.0%
! GTGATTTGGATCCCTATAAA+TGG + tig0009838:14444-14463 Msa1347520:CDS 35.0%
!! TTTGACTTGGGCCATTTATA+GGG - tig0009838:14458-14477 Msa1347520:intergenic 35.0%
!!! TTTTGACTTGGGCCATTTAT+AGG - tig0009838:14459-14478 Msa1347520:intergenic 35.0%
ATAAATGGCCCAAGTCAAAA+TGG + tig0009838:14459-14478 Msa1347520:CDS 35.0%
!!! AAGCATCTCCATTTTGACTT+GGG - tig0009838:14470-14489 Msa1347520:intergenic 35.0%
AGCTATCTGTGATATTACAC+AGG + tig0009838:14668-14687 Msa1347520:intron 35.0%
AAGATTGAATGTTCAAGGGA+GGG - tig0009838:14770-14789 Msa1347520:intergenic 35.0%
CGACAAGATTGAATGTTCAA+GGG - tig0009838:14774-14793 Msa1347520:intergenic 35.0%
TCGACAAGATTGAATGTTCA+AGG - tig0009838:14775-14794 Msa1347520:intergenic 35.0%
TGAACATTCAATCTTGTCGA+AGG + tig0009838:14775-14794 Msa1347520:CDS 35.0%
TTGGATTCATACCAGTGATA+AGG - tig0009838:14845-14864 Msa1347520:intergenic 35.0%
! TTCTAGTTATGCAGACTTCA+CGG + tig0009838:15146-15165 Msa1347520:CDS 35.0%
AATATATCCATTGAGATCCC+TGG + tig0009838:15206-15225 Msa1347520:CDS 35.0%
GATCTAAACCTTAACTCTTG+GGG + tig0009838:15240-15259 Msa1347520:CDS 35.0%
TAAGTTTGGTTGCATTATGC+AGG - tig0009838:15296-15315 Msa1347520:intergenic 35.0%
! GATATACACAAAGTTGGTCA+AGG + tig0009838:15369-15388 Msa1347520:CDS 35.0%
! TAGTTGGAAATTGGTTGGTT+TGG - tig0009838:15412-15431 Msa1347520:intergenic 35.0%
TTCTCTAGTTGGAAATTGGT+TGG - tig0009838:15417-15436 Msa1347520:intergenic 35.0%
TGACAAAAATTTCAACGCGA+AGG + tig0009838:15581-15600 Msa1347520:CDS 35.0%
! ATTTGGATTTTCCTTATCGG+CGG + tig0009838:15620-15639 Msa1347520:CDS 35.0%
! AGAGTTCTGTAGATTTTGTG+AGG - tig0009838:15655-15674 Msa1347520:intergenic 35.0%
TGAATGAAGGTTCACAAACA+AGG + tig0009838:15783-15802 Msa1347520:intron 35.0%
GAATGAAGGTTCACAAACAA+GGG + tig0009838:15784-15803 Msa1347520:intron 35.0%
AGTGAACTAGAGAGACTATT+TGG + tig0009838:15864-15883 Msa1347520:CDS 35.0%
!! CCTCGATATAAGAGTGTCAA+AGG - tig0009838:12064-12083 Msa0896450:intergenic 40.0%
CCTTTGACACTCTTATATCG+AGG + tig0009838:12061-12080 Msa1347520:five_prime_UTR 40.0%
GAACTAGAAGATGAACATGC+TGG - tig0009838:12375-12394 Msa1347520:intergenic 40.0%
TGAAGATACAAGAGCTGAAG+TGG - tig0009838:12397-12416 Msa1347520:intergenic 40.0%
ACTTGTTCCAAATGACCTTG+TGG - tig0009838:12498-12517 Msa1347520:intergenic 40.0%
TGTGGTTGAAGACCATATGT+TGG - tig0009838:12555-12574 Msa1347520:intergenic 40.0%
! TCTCCTTATTGGCCTGTTAA+TGG - tig0009838:12718-12737 Msa1347520:intergenic 40.0%
GAATGATGAGGTTTACACAC+AGG + tig0009838:12736-12755 Msa1347520:CDS 40.0%
TCCTTTGTCGAATTTCTCCT+TGG + tig0009838:13051-13070 Msa1347520:intron 40.0%
CCTTTGTCGAATTTCTCCTT+GGG + tig0009838:13052-13071 Msa1347520:intron 40.0%
ACACTAGTATTTGGATCCCA+AGG - tig0009838:13071-13090 Msa1347520:intergenic 40.0%
TTCTTTGCTCCTACCTCATA+AGG + tig0009838:13112-13131 Msa1347520:intron 40.0%
TTGTGTTGCATTCAGTTAGC+AGG + tig0009838:13147-13166 Msa1347520:intron 40.0%
TGTGTTGCATTCAGTTAGCA+GGG + tig0009838:13148-13167 Msa1347520:intron 40.0%
TGTCATACTCATACCAAAGG+AGG - tig0009838:13342-13361 Msa1347520:intergenic 40.0%
CACTATGAGTCTGTTTGGAT+TGG + tig0009838:13360-13379 Msa1347520:intron 40.0%
ATTGTTGGAAAGTTCGAAGG+TGG + tig0009838:13521-13540 Msa1347520:intron 40.0%
TTTGCAACAAGCTCTTGAGA+GGG - tig0009838:13596-13615 Msa1347520:intergenic 40.0%
! TTTTGCAACAAGCTCTTGAG+AGG - tig0009838:13597-13616 Msa1347520:intergenic 40.0%
TTCGCCATATTTATCGAGGT+AGG + tig0009838:13642-13661 Msa1347520:intron 40.0%
! CCCCAGAAACAAGATTCTTT+TGG - tig0009838:13798-13817 Msa1347520:intergenic 40.0%
ATAGAGATCCATGAGCAGTA+AGG - tig0009838:13925-13944 Msa1347520:intergenic 40.0%
TGCTCATGGATCTCTATGTA+GGG + tig0009838:13928-13947 Msa1347520:intron 40.0%
TCTCTATGTAGGGGTGAAAA+CGG + tig0009838:13938-13957 Msa1347520:intron 40.0%
GGTCTTCCTGAATCAATTGT+TGG + tig0009838:14004-14023 Msa1347520:CDS 40.0%
TCCTAGTTTCCTTTCTTCAG+TGG + tig0009838:14042-14061 Msa1347520:CDS 40.0%
TAGCATTAGCCACTGAAGAA+AGG - tig0009838:14054-14073 Msa1347520:intergenic 40.0%
! AGTCCAAGGTACTTGATTAG+CGG + tig0009838:14106-14125 Msa1347520:intron 40.0%
TATCCGCTAATCAAGTACCT+TGG - tig0009838:14112-14131 Msa1347520:intergenic 40.0%
TTGGTAAGGCACAACGAAAT+CGG - tig0009838:14232-14251 Msa1347520:intergenic 40.0%
TGGATGAATCTCCAGAAAGA+AGG + tig0009838:14316-14335 Msa1347520:CDS 40.0%
GTTATAGCTGACCTTCTTTC+TGG - tig0009838:14330-14349 Msa1347520:intergenic 40.0%
AGTGACTGGAATGAGTGATT+TGG + tig0009838:14430-14449 Msa1347520:CDS 40.0%
!!! CAAGCATCTCCATTTTGACT+TGG - tig0009838:14471-14490 Msa1347520:intergenic 40.0%
GTCAAAATGGAGATGCTTGA+TGG + tig0009838:14472-14491 Msa1347520:CDS 40.0%
TGATATTACACAGGTCCGAT+GGG + tig0009838:14677-14696 Msa1347520:intron 40.0%
ATCAAGATAGAGTCTCTCCT+TGG + tig0009838:14721-14740 Msa1347520:CDS 40.0%
TCAAGATAGAGTCTCTCCTT+GGG + tig0009838:14722-14741 Msa1347520:CDS 40.0%
CAAGATTGAATGTTCAAGGG+AGG - tig0009838:14771-14790 Msa1347520:intergenic 40.0%
ATACCAGTGATAAGGTGACT+GGG - tig0009838:14837-14856 Msa1347520:intergenic 40.0%
TGAGTCTATAAGATCGACCA+AGG + tig0009838:14963-14982 Msa1347520:CDS 40.0%
TTACTTCTTCCGAGTTTACG+AGG + tig0009838:15115-15134 Msa1347520:CDS 40.0%
TACTTCTTCCGAGTTTACGA+GGG + tig0009838:15116-15135 Msa1347520:CDS 40.0%
GTGAAGTCTGCATAACTAGA+AGG - tig0009838:15147-15166 Msa1347520:intergenic 40.0%
!! TGGTTTTACCCCAAGAGTTA+AGG - tig0009838:15251-15270 Msa1347520:intergenic 40.0%
AATACTCCTTCAGCTCAGAT+AGG + tig0009838:15447-15466 Msa1347520:CDS 40.0%
GGTGCATTGAGAAATGAAGT+TGG + tig0009838:15468-15487 Msa1347520:CDS 40.0%
! GTTCTGTAGATTTTGTGAGG+TGG - tig0009838:15652-15671 Msa1347520:intergenic 40.0%
TGCTAAAAGAAGTTGCACGA+AGG + tig0009838:15674-15693 Msa1347520:CDS 40.0%
! ATGCGTTGGCAAATTGTCAA+AGG - tig0009838:15750-15769 Msa1347520:intergenic 40.0%
GCTCAATCTTGAGAGATCAA+TGG - tig0009838:15826-15845 Msa1347520:intergenic 40.0%
ATTGAGCAGCTACAATGATC+TGG + tig0009838:15839-15858 Msa1347520:CDS 40.0%
ACTAGAGAGACTATTTGGCA+TGG + tig0009838:15869-15888 Msa1347520:CDS 40.0%
! CTTCTAAGAGATCCTGACAA+AGG + tig0009838:15897-15916 Msa1347520:CDS 40.0%
TAAGAGATCCTGACAAAGGA+TGG + tig0009838:15901-15920 Msa1347520:CDS 40.0%
! CATTTTCACTGTCAGTGTAG+AGG - tig0009838:15932-15951 Msa1347520:intergenic 40.0%
GGCCAATAAGGAGAATGATG+AGG + tig0009838:12724-12743 Msa1347520:intron 45.0%
! ACAGGTTACTTTGCTTCCAC+AGG + tig0009838:12754-12773 Msa1347520:CDS 45.0%
ATAAAACCTACCTCTGCCTG+TGG - tig0009838:12773-12792 Msa1347520:intergenic 45.0%
! ACAGGCAGAGGTAGGTTTTA+TGG + tig0009838:12772-12791 Msa1347520:intron 45.0%
CCCAAGGAGAAATTCGACAA+AGG - tig0009838:13055-13074 Msa1347520:intergenic 45.0%
TCAGTTAGCAGGGATGTGTT+TGG + tig0009838:13158-13177 Msa1347520:intron 45.0%
TTGGATGACAAAGAGCCTGA+AGG + tig0009838:13177-13196 Msa1347520:CDS 45.0%
CTTGTTGCAAAAGACCTGCA+TGG + tig0009838:13605-13624 Msa1347520:CDS 45.0%
AATCTTTGTCAGGTCAGCCA+AGG + tig0009838:13734-13753 Msa1347520:intron 45.0%
CTGCTCATGGATCTCTATGT+AGG + tig0009838:13927-13946 Msa1347520:intron 45.0%
GCTCATGGATCTCTATGTAG+GGG + tig0009838:13929-13948 Msa1347520:intron 45.0%
GATTCAGGAAGACCGTTTCT+CGG - tig0009838:13998-14017 Msa1347520:intergenic 45.0%
GGAAACTAGGAGAACAACTC+TGG - tig0009838:14033-14052 Msa1347520:intergenic 45.0%
GCCACTGAAGAAAGGAAACT+AGG - tig0009838:14046-14065 Msa1347520:intergenic 45.0%
ATCTTGTCCCTATGGTCAGT+GGG - tig0009838:14278-14297 Msa1347520:intergenic 45.0%
AATCTTGTCCCTATGGTCAG+TGG - tig0009838:14279-14298 Msa1347520:intergenic 45.0%
ATGTCTTGCAGGTGTAGTAG+CGG + tig0009838:14404-14423 Msa1347520:intron 45.0%
TGTAGTAGCGGTATAGTGAC+TGG + tig0009838:14416-14435 Msa1347520:CDS 45.0%
! TAGAAAGGCGTACGCTTCAA+CGG - tig0009838:14597-14616 Msa1347520:intergenic 45.0%
GTGATATTACACAGGTCCGA+TGG + tig0009838:14676-14695 Msa1347520:intron 45.0%
CCTCAATATCCTCATCCCAT+CGG - tig0009838:14695-14714 Msa1347520:intergenic 45.0%
CATACCAGTGATAAGGTGAC+TGG - tig0009838:14838-14857 Msa1347520:intergenic 45.0%
TTCTTGACCTTGCAAGACCT+TGG - tig0009838:14983-15002 Msa1347520:intergenic 45.0%
TAGATCAACCTTTCCTGCCA+GGG - tig0009838:15226-15245 Msa1347520:intergenic 45.0%
TTAGATCAACCTTTCCTGCC+AGG - tig0009838:15227-15246 Msa1347520:intergenic 45.0%
AATGCACCTATCTGAGCTGA+AGG - tig0009838:15456-15475 Msa1347520:intergenic 45.0%
! ATTTCTGCTGCTGCTTCTCT+AGG + tig0009838:15537-15556 Msa1347520:CDS 45.0%
CTTCTCTAGGTGCAAACTTG+AGG + tig0009838:15550-15569 Msa1347520:CDS 45.0%
CACAAACAAGGGAGCTTAGT+TGG + tig0009838:15795-15814 Msa1347520:CDS 45.0%
GAGAGACTATTTGGCATGGA+AGG + tig0009838:15873-15892 Msa1347520:CDS 45.0%
AGGATTCTCCATCCTTTGTC+AGG - tig0009838:15912-15931 Msa1347520:intergenic 45.0%
GAACTATGGCATGCTTGTGC+TGG + tig0009838:12426-12445 Msa1347520:CDS 50.0%
TACTTTGCTTCCACAGGCAG+AGG + tig0009838:12760-12779 Msa1347520:CDS 50.0%
GAGCCTGAAGGTTTAGAAGC+AGG + tig0009838:13189-13208 Msa1347520:CDS 50.0%
CCACCTGCTTCTAAACCTTC+AGG - tig0009838:13195-13214 Msa1347520:intergenic 50.0%
CCTGAAGGTTTAGAAGCAGG+TGG + tig0009838:13192-13211 Msa1347520:CDS 50.0%
AGGTTTAGAAGCAGGTGGAG+AGG + tig0009838:13197-13216 Msa1347520:CDS 50.0%
GGTTTAGAAGCAGGTGGAGA+GGG + tig0009838:13198-13217 Msa1347520:CDS 50.0%
!! TCCATGAGTGCTGGTATCAG+AGG - tig0009838:13280-13299 Msa1347520:intergenic 50.0%
TCTGATACCAGCACTCATGG+AGG + tig0009838:13279-13298 Msa1347520:CDS 50.0%
CTGATACCAGCACTCATGGA+GGG + tig0009838:13280-13299 Msa1347520:CDS 50.0%
AGAAAACCCTCCATGAGTGC+TGG - tig0009838:13289-13308 Msa1347520:intergenic 50.0%
TGCAAAAGACCTGCATGGTG+TGG + tig0009838:13610-13629 Msa1347520:CDS 50.0%
ATTTCCACTCCACACCATGC+AGG - tig0009838:13622-13641 Msa1347520:intergenic 50.0%
TGAGCAGTAAGGTACACTGC+AGG - tig0009838:13914-13933 Msa1347520:intergenic 50.0%
GCAGTGTACCTTACTGCTCA+TGG + tig0009838:13914-13933 Msa1347520:intron 50.0%
ATCAGGAACCCACTGACCAT+AGG + tig0009838:14267-14286 Msa1347520:CDS 50.0%
TCAGGAACCCACTGACCATA+GGG + tig0009838:14268-14287 Msa1347520:CDS 50.0%
CCGATGGGATGAGGATATTG+AGG + tig0009838:14692-14711 Msa1347520:CDS 50.0%
AAGGGAGGGAGAGAAGTAGA+CGG - tig0009838:14756-14775 Msa1347520:intergenic 50.0%
GTCGAAGGCTGAAGAAACTG+CGG + tig0009838:14790-14809 Msa1347520:CDS 50.0%
AAGGCTGAAGAAACTGCGGA+CGG + tig0009838:14794-14813 Msa1347520:CDS 50.0%
TCACCCAGTCACCTTATCAC+TGG + tig0009838:14831-14850 Msa1347520:CDS 50.0%
GCGATGAAGATGGGGTGATT+AGG - tig0009838:14913-14932 Msa1347520:intergenic 50.0%
TCTCCAGCTGCGATGAAGAT+GGG - tig0009838:14922-14941 Msa1347520:intergenic 50.0%
! AGCTGGAGACAGTGGGTTTA+TGG + tig0009838:14933-14952 Msa1347520:intron 50.0%
AGATCGACCAAGGTCTTGCA+AGG + tig0009838:14973-14992 Msa1347520:CDS 50.0%
AGGCTGAACCCTCGTAAACT+CGG - tig0009838:15127-15146 Msa1347520:intergenic 50.0%
CAGACTTCACGGAAACGAAC+CGG + tig0009838:15157-15176 Msa1347520:CDS 50.0%
! GGAAACGAACCGGTTTCCTA+GGG + tig0009838:15167-15186 Msa1347520:CDS 50.0%
CTTGCAAGACCCTAGGAAAC+CGG - tig0009838:15179-15198 Msa1347520:intergenic 50.0%
TCTTGACCTTGCAAGACCCT+AGG - tig0009838:15186-15205 Msa1347520:intergenic 50.0%
TATCCATTGAGATCCCTGGC+AGG + tig0009838:15210-15229 Msa1347520:CDS 50.0%
TTTCCTGCCAGGGATCTCAA+TGG - tig0009838:15216-15235 Msa1347520:intergenic 50.0%
ATTGAGATCCCTGGCAGGAA+AGG + tig0009838:15215-15234 Msa1347520:CDS 50.0%
CCTGCAGCTTCTGCTTGTTT+CGG - tig0009838:15512-15531 Msa1347520:intergenic 50.0%
! TGGATTTTCCTTATCGGCGG+CGG + tig0009838:15623-15642 Msa1347520:CDS 50.0%
TGGTTGTTGGGGATGATCCA+TGG + tig0009838:15958-15977 Msa1347520:CDS 50.0%
TTGCTTCCACAGGCAGAGGT+AGG + tig0009838:12764-12783 Msa1347520:intron 55.0%
GCCTCTGATACCAGCACTCA+TGG + tig0009838:13276-13295 Msa1347520:CDS 55.0%
CAATCTTCAGCAGCTCGACG+AGG - tig0009838:13315-13334 Msa1347520:intergenic 55.0%
AAGACCTGCATGGTGTGGAG+TGG + tig0009838:13615-13634 Msa1347520:CDS 55.0%
CTTTGTCAGGTCAGCCAAGG+AGG + tig0009838:13737-13756 Msa1347520:intron 55.0%
GTAGTGAGCAGATGCCTCCT+TGG - tig0009838:13754-13773 Msa1347520:intergenic 55.0%
!! AGGAGGCATCTGCTCACTAC+TGG + tig0009838:13754-13773 Msa1347520:CDS 55.0%
GGGACGCAGTGCTCTTTCTA+AGG + tig0009838:13815-13834 Msa1347520:CDS 55.0%
AGAGCTGCTCGACCGAGAAA+CGG + tig0009838:13983-14002 Msa1347520:CDS 55.0%
GTACGCTTCAACGGCACAGT+TGG - tig0009838:14588-14607 Msa1347520:intergenic 55.0%
TACACAGGTCCGATGGGATG+AGG + tig0009838:14683-14702 Msa1347520:intron 55.0%
GTAGACGGATCGATCTCCCA+AGG - tig0009838:14741-14760 Msa1347520:intergenic 55.0%
AGGCTGAAGAAACTGCGGAC+GGG + tig0009838:14795-14814 Msa1347520:CDS 55.0%
CTCCAGCTGCGATGAAGATG+GGG - tig0009838:14921-14940 Msa1347520:intergenic 55.0%
GTCTCCAGCTGCGATGAAGA+TGG - tig0009838:14923-14942 Msa1347520:intergenic 55.0%
TTCATCGCAGCTGGAGACAG+TGG + tig0009838:14925-14944 Msa1347520:intron 55.0%
TCATCGCAGCTGGAGACAGT+GGG + tig0009838:14926-14945 Msa1347520:intron 55.0%
! CGGAAACGAACCGGTTTCCT+AGG + tig0009838:15166-15185 Msa1347520:CDS 55.0%
CGGTTTCCTAGGGTCTTGCA+AGG + tig0009838:15177-15196 Msa1347520:CDS 55.0%
CCGAAACAAGCAGAAGCTGC+AGG + tig0009838:15509-15528 Msa1347520:CDS 55.0%
GAAGCAGGTGGAGAGGGAGA+TGG + tig0009838:13204-13223 Msa1347520:CDS 60.0%
GGCATCTGCTCACTACTGGC+TGG + tig0009838:13758-13777 Msa1347520:CDS 60.0%
CACCCCATCTTCATCGCAGC+TGG + tig0009838:14916-14935 Msa1347520:intron 60.0%
GGTGGTTTCCGCCGCCGATA+AGG - tig0009838:15634-15653 Msa1347520:intergenic 65.0%
Chromosome Type Strat End Strand Name
tig0009838 gene 12022 15991 12022 ID=Msa1347520;Name=Msa1347520
tig0009838 mRNA 12022 15991 12022 ID=Msa1347520-mRNA-1;Parent=Msa1347520;Name=Msa1347520-mRNA-1;_AED=0.12;_eAED=0.12;_QI=239|1|1|1|1|1|11|5|749
tig0009838 exon 12022 12608 12022 ID=Msa1347520-mRNA-1:exon:5919;Parent=Msa1347520-mRNA-1
tig0009838 exon 12725 12781 12725 ID=Msa1347520-mRNA-1:exon:5920;Parent=Msa1347520-mRNA-1
tig0009838 exon 13162 13347 13162 ID=Msa1347520-mRNA-1:exon:5921;Parent=Msa1347520-mRNA-1
tig0009838 exon 13575 13659 13575 ID=Msa1347520-mRNA-1:exon:5922;Parent=Msa1347520-mRNA-1
tig0009838 exon 13746 13836 13746 ID=Msa1347520-mRNA-1:exon:5923;Parent=Msa1347520-mRNA-1
tig0009838 exon 13949 14113 13949 ID=Msa1347520-mRNA-1:exon:5924;Parent=Msa1347520-mRNA-1
tig0009838 exon 14218 14337 14218 ID=Msa1347520-mRNA-1:exon:5925;Parent=Msa1347520-mRNA-1
tig0009838 exon 14415 14493 14415 ID=Msa1347520-mRNA-1:exon:5926;Parent=Msa1347520-mRNA-1
tig0009838 exon 14690 14852 14690 ID=Msa1347520-mRNA-1:exon:5927;Parent=Msa1347520-mRNA-1
tig0009838 exon 14935 15695 14935 ID=Msa1347520-mRNA-1:exon:5928;Parent=Msa1347520-mRNA-1
tig0009838 exon 15792 15991 15792 ID=Msa1347520-mRNA-1:exon:5929;Parent=Msa1347520-mRNA-1
tig0009838 five_prime_UTR 12022 12260 12022 ID=Msa1347520-mRNA-1:five_prime_utr;Parent=Msa1347520-mRNA-1
tig0009838 CDS 12261 12608 12261 ID=Msa1347520-mRNA-1:cds;Parent=Msa1347520-mRNA-1
tig0009838 CDS 12725 12781 12725 ID=Msa1347520-mRNA-1:cds;Parent=Msa1347520-mRNA-1
tig0009838 CDS 13162 13347 13162 ID=Msa1347520-mRNA-1:cds;Parent=Msa1347520-mRNA-1
tig0009838 CDS 13575 13659 13575 ID=Msa1347520-mRNA-1:cds;Parent=Msa1347520-mRNA-1
tig0009838 CDS 13746 13836 13746 ID=Msa1347520-mRNA-1:cds;Parent=Msa1347520-mRNA-1
tig0009838 CDS 13949 14113 13949 ID=Msa1347520-mRNA-1:cds;Parent=Msa1347520-mRNA-1
tig0009838 CDS 14218 14337 14218 ID=Msa1347520-mRNA-1:cds;Parent=Msa1347520-mRNA-1
tig0009838 CDS 14415 14493 14415 ID=Msa1347520-mRNA-1:cds;Parent=Msa1347520-mRNA-1
tig0009838 CDS 14690 14852 14690 ID=Msa1347520-mRNA-1:cds;Parent=Msa1347520-mRNA-1
tig0009838 CDS 14935 15695 14935 ID=Msa1347520-mRNA-1:cds;Parent=Msa1347520-mRNA-1
tig0009838 CDS 15792 15986 15792 ID=Msa1347520-mRNA-1:cds;Parent=Msa1347520-mRNA-1
tig0009838 three_prime_UTR 15987 15991 15987 ID=Msa1347520-mRNA-1:three_prime_utr;Parent=Msa1347520-mRNA-1
Gene Sequence

>Msa1347520

ATGGATATTGATCTGAATGATTCCACAACTCAAGTTAAGAAGAATACATGTTGCAATGGTGAATGTGAGAAAAGTGTTTGTTGTGTTTGCACTTTATCTTCTTCTTCATCACCAGCATGTTCATCTTCTAGTTCCACTTCAGCTCTTGTATCTTCATCTTATCTTGAACTATGGCATGCTTGTGCTGGACCTTTAACATCACTTCCAAAGAAAGGGAATGTTGTAGTTTATTTTCCACAAGGTCATTTGGAACAAGTTGCATCTTTGTCCCTCTTTTCTTCATTGGAAATTCCAACATATGGTCTTCAACCACAAATCTTTTGTAGGGTTGTCAATGTTCAACTACTTGCCAATAAGGAGAATGATGAGGTTTACACACAGGTTACTTTGCTTCCACAGGCAGAGTTAGCAGGGATGTGTTTGGATGACAAAGAGCCTGAAGGTTTAGAAGCAGGTGGAGAGGGAGATGGAAGATCGCCTACAAAGTTAGCTTCTCACATGTTTTGCAAAACACTCACTGCCTCTGATACCAGCACTCATGGAGGGTTTTCTGTTCCTCGTCGAGCTGCTGAAGATTGTTTTCCTCCTTTGGATTATAAGCAGCAGAGACCCTCTCAAGAGCTTGTTGCAAAAGACCTGCATGGTGTGGAGTGGAAATTTCGCCATATTTATCGAGGTCAGCCAAGGAGGCATCTGCTCACTACTGGCTGGAGTGCTTTTGTTAGCCAAAAGAATCTTGTTTCTGGGGACGCAGTGCTCTTTCTAAGGGGTGAAAACGGAGAGTTAAGATTGGGAATCAGAAGAGCTGCTCGACCGAGAAACGGTCTTCCTGAATCAATTGTTGGTAACCAGAGTTGTTCTCCTAGTTTCCTTTCTTCAGTGGCTAATGCTATCTCCGCAAAAAGCATGTTTCATGTTTTCTACAGTCCAAGAGCTAGTCATGCCGATTTCGTTGTGCCTTACCAAAAGTATGCTAAAAGCATCAGGAACCCACTGACCATAGGGACAAGATTCAAAATGAAATTTGAAATGGATGAATCTCCAGAAAGAAGGTGTAGTAGCGGTATAGTGACTGGAATGAGTGATTTGGATCCCTATAAATGGCCCAAGTCAAAATGGAGATGCTTGATGGTCCGATGGGATGAGGATATTGAGGCTAATCATCAAGATAGAGTCTCTCCTTGGGAGATCGATCCGTCTACTTCTCTCCCTCCCTTGAACATTCAATCTTGTCGAAGGCTGAAGAAACTGCGGACGGGTCTGCAAGTTGAATCACCCAGTCACCTTATCACTGCTGGAGACAGTGGGTTTATGGACTTTGATGAGTCTATAAGATCGACCAAGGTCTTGCAAGGTCAAGAAAAAACAAGTTTTATGTCACTATATTATGGATGTGACACAGTAACTAAGCAGAAAGAATTTGATATCAATTCTCTAAGACATACTAATCTTGCATCAAATGGAGCAAGAAAGATTACTTCTTCCGAGTTTACGAGGGTTCAGCCTTCTAGTTATGCAGACTTCACGGAAACGAACCGGTTTCCTAGGGTCTTGCAAGGTCAAGAAATATATCCATTGAGATCCCTGGCAGGAAAGGTTGATCTAAACCTTAACTCTTGGGGTAAAACCAATGTTAGTTACACAAATTATAACCTGCATAATGCAACCAAACTTAACTTTCACTCATTAGGATCAGAAGTTCTTCAAAATTCCTCTTTTCCATATGGTGATATACACAAAGTTGGTCAAGGTAGCAGCATGCTGTGCTCCAAACCAACCAATTTCCAACTAGAGAATGTTTCATTTAATACTCCTTCAGCTCAGATAGGTGCATTGAGAAATGAAGTTGGAATATCAGGTTTCACAATCCGAAACAAGCAGAAGCTGCAGGACAATATTTCTGCTGCTGCTTCTCTAGGTGCAAACTTGAGGATTTCAAATGACAAAAATTTCAACGCGAAGGTAAATCCTTGTAGACTATTTGGATTTTCCTTATCGGCGGCGGAAACCACCTCACAAAATCTACAGAACTCTGCTAAAAGAAGTTGCACGAAGGTTCACAAACAAGGGAGCTTAGTTGGAAGAGCCATTGATCTCTCAAGATTGAGCAGCTACAATGATCTGGTGAGTGAACTAGAGAGACTATTTGGCATGGAAGGTCTTCTAAGAGATCCTGACAAAGGATGGAGAATCCTCTACACTGACAGTGAAAATGACATTATGGTTGTTGGGGATGATCCATGGCAGTAA
Protein sequence

>Msa1347520

MDIDLNDSTTQVKKNTCCNGECEKSVCCVCTLSSSSSPACSSSSSTSALVSSSYLELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASLSLFSSLEIPTYGLQPQIFCRVVNVQLLANKENDEVYTQVTLLPQAELAGMCLDDKEPEGLEAGGEGDGRSPTKLASHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWKFRHIYRGQPRRHLLTTGWSAFVSQKNLVSGDAVLFLRGENGELRLGIRRAARPRNGLPESIVGNQSCSPSFLSSVANAISAKSMFHVFYSPRASHADFVVPYQKYAKSIRNPLTIGTRFKMKFEMDESPERRCSSGIVTGMSDLDPYKWPKSKWRCLMVRWDEDIEANHQDRVSPWEIDPSTSLPPLNIQSCRRLKKLRTGLQVESPSHLITAGDSGFMDFDESIRSTKVLQGQEKTSFMSLYYGCDTVTKQKEFDINSLRHTNLASNGARKITSSEFTRVQPSSYADFTETNRFPRVLQGQEIYPLRSLAGKVDLNLNSWGKTNVSYTNYNLHNATKLNFHSLGSEVLQNSSFPYGDIHKVGQGSSMLCSKPTNFQLENVSFNTPSAQIGALRNEVGISGFTIRNKQKLQDNISAAASLGANLRISNDKNFNAKVNPCRLFGFSLSAAETTSQNLQNSAKRSCTKVHKQGSLVGRAIDLSRLSSYNDLVSELERLFGMEGLLRDPDKGWRILYTDSENDIMVVGDDPWQ*