Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0643300 | XP_013456038.1 | 95.759 | 613 | 17 | 1 | 1 | 604 | 5 | 617 | 0.0 | 1167 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0643300 | sp|Q9LSS5|ICR3_ARATH | 43.760 | 617 | 274 | 14 | 1 | 604 | 8 | 564 | 3.63e-134 | 406 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003700 | Msa0643300 | 0.824732 | 6.882422e-54 | -8.615850e-47 |
| Msa0005890 | Msa0643300 | 0.801983 | 6.959024e-49 | -8.615850e-47 |
| Msa0007480 | Msa0643300 | 0.816658 | 4.937048e-52 | -8.615850e-47 |
| Msa0017510 | Msa0643300 | 0.814380 | 1.586439e-51 | -8.615850e-47 |
| Msa0018000 | Msa0643300 | 0.810499 | 1.118069e-50 | -8.615850e-47 |
| Msa0021500 | Msa0643300 | 0.820983 | 5.140377e-53 | -8.615850e-47 |
| Msa0026130 | Msa0643300 | 0.807140 | 5.845027e-50 | -8.615850e-47 |
| Msa0027230 | Msa0643300 | 0.821202 | 4.576925e-53 | -8.615850e-47 |
| Msa0028420 | Msa0643300 | 0.833287 | 5.816396e-56 | -8.615850e-47 |
| Msa0034270 | Msa0643300 | 0.813594 | 2.364969e-51 | -8.615850e-47 |
| Msa0036850 | Msa0643300 | 0.800958 | 1.128824e-48 | -8.615850e-47 |
| Msa0036870 | Msa0643300 | 0.817060 | 4.010080e-52 | -8.615850e-47 |
| Msa0040240 | Msa0643300 | 0.836335 | 9.939141e-57 | -8.615850e-47 |
| Msa0042610 | Msa0643300 | 0.815019 | 1.145224e-51 | -8.615850e-47 |
| Msa0069330 | Msa0643300 | 0.810476 | 1.131027e-50 | -8.615850e-47 |
| Msa0074350 | Msa0643300 | 0.801208 | 1.003310e-48 | -8.615850e-47 |
| Msa0075220 | Msa0643300 | 0.836474 | 9.159748e-57 | -8.615850e-47 |
| Msa0081520 | Msa0643300 | 0.849554 | 3.002448e-60 | -8.615850e-47 |
| Msa0087940 | Msa0643300 | 0.821576 | 3.752297e-53 | -8.615850e-47 |
| Msa0094130 | Msa0643300 | 0.806020 | 1.007467e-49 | -8.615850e-47 |
| Msa0094850 | Msa0643300 | 0.824070 | 9.851074e-54 | -8.615850e-47 |
| Msa0095900 | Msa0643300 | 0.804819 | 1.798835e-49 | -8.615850e-47 |
| Msa0110970 | Msa0643300 | 0.820272 | 7.485757e-53 | -8.615850e-47 |
| Msa0115160 | Msa0643300 | 0.832066 | 1.168312e-55 | -8.615850e-47 |
| Msa0118570 | Msa0643300 | 0.861372 | 1.074764e-63 | -8.615850e-47 |
| Msa0614000 | Msa0643300 | 0.812485 | 4.140406e-51 | -8.615850e-47 |
| Msa0620990 | Msa0643300 | 0.804008 | 2.654929e-49 | -8.615850e-47 |
| Msa0625630 | Msa0643300 | 0.825801 | 3.844622e-54 | -8.615850e-47 |
| Msa0626450 | Msa0643300 | 0.847591 | 1.049666e-59 | -8.615850e-47 |
| Msa0626490 | Msa0643300 | 0.850900 | 1.258699e-60 | -8.615850e-47 |
| Msa0634300 | Msa0643300 | 0.816401 | 5.637775e-52 | -8.615850e-47 |
| Msa0638480 | Msa0643300 | 0.814127 | 1.805123e-51 | -8.615850e-47 |
| Msa0643300 | Msa0663300 | 0.850583 | 1.546476e-60 | -8.615850e-47 |
| Msa0643300 | Msa0664060 | 0.843336 | 1.492136e-58 | -8.615850e-47 |
| Msa0643300 | Msa0664600 | 0.848285 | 6.758389e-60 | -8.615850e-47 |
| Msa0643300 | Msa0682330 | 0.813387 | 2.626330e-51 | -8.615850e-47 |
| Msa0643300 | Msa0683290 | 0.953340 | 3.401494e-111 | -8.615850e-47 |
| Msa0643300 | Msa0683570 | 0.938117 | 1.142001e-98 | -8.615850e-47 |
| Msa0643300 | Msa0718550 | 0.828669 | 7.906308e-55 | -8.615850e-47 |
| Msa0643300 | Msa0724910 | 0.835472 | 1.644804e-56 | -8.615850e-47 |
| Msa0643300 | Msa0738040 | 0.831501 | 1.610556e-55 | -8.615850e-47 |
| Msa0643300 | Msa0742740 | 0.831792 | 1.365095e-55 | -8.615850e-47 |
| Msa0643300 | Msa0749220 | 0.801778 | 7.667754e-49 | -8.615850e-47 |
| Msa0643300 | Msa0754520 | 0.817903 | 2.589543e-52 | -8.615850e-47 |
| Msa0643300 | Msa0768990 | 0.817878 | 2.623403e-52 | -8.615850e-47 |
| Msa0643300 | Msa0769180 | 0.814034 | 1.891616e-51 | -8.615850e-47 |
| Msa0643300 | Msa0770720 | 0.816722 | 4.776699e-52 | -8.615850e-47 |
| Msa0643300 | Msa0795870 | 0.818850 | 1.580193e-52 | -8.615850e-47 |
| Msa0643300 | Msa0801210 | 0.813342 | 2.686642e-51 | -8.615850e-47 |
| Msa0643300 | Msa0821760 | 0.810768 | 9.780760e-51 | -8.615850e-47 |
| Msa0643300 | Msa0823820 | 0.843364 | 1.466051e-58 | -8.615850e-47 |
| Msa0643300 | Msa0826130 | 0.818350 | 2.052051e-52 | -8.615850e-47 |
| Msa0643300 | Msa0833220 | 0.811592 | 6.480839e-51 | -8.615850e-47 |
| Msa0643300 | Msa0833650 | 0.819552 | 1.094013e-52 | -8.615850e-47 |
| Msa0643300 | Msa0839560 | 0.813284 | 2.766917e-51 | -8.615850e-47 |
| Msa0643300 | Msa0855830 | 0.802092 | 6.611310e-49 | -8.615850e-47 |
| Msa0643300 | Msa0861510 | 0.839868 | 1.225104e-57 | -8.615850e-47 |
| Msa0643300 | Msa0861530 | 0.821222 | 4.527831e-53 | -8.615850e-47 |
| Msa0643300 | Msa0861600 | 0.837381 | 5.376219e-57 | -8.615850e-47 |
| Msa0643300 | Msa0863010 | 0.841559 | 4.415737e-58 | -8.615850e-47 |
| Msa0643300 | Msa0867480 | 0.802605 | 5.183690e-49 | -8.615850e-47 |
| Msa0643300 | Msa0869780 | 0.836779 | 7.661193e-57 | -8.615850e-47 |
| Msa0643300 | Msa0880140 | 0.810512 | 1.110847e-50 | -8.615850e-47 |
| Msa0643300 | Msa0896540 | 0.839552 | 1.479677e-57 | -8.615850e-47 |
| Msa0643300 | Msa0896970 | 0.809801 | 1.580944e-50 | -8.615850e-47 |
| Msa0643300 | Msa0925180 | 0.802532 | 5.366302e-49 | -8.615850e-47 |
| Msa0643300 | Msa0930780 | 0.810451 | 1.145496e-50 | -8.615850e-47 |
| Msa0643300 | Msa0936410 | 0.809901 | 1.504394e-50 | -8.615850e-47 |
| Msa0643300 | Msa0945110 | 0.838593 | 2.622381e-57 | -8.615850e-47 |
| Msa0643300 | Msa0961690 | 0.815381 | 9.519107e-52 | -8.615850e-47 |
| Msa0643300 | Msa0981320 | 0.823180 | 1.590945e-53 | -8.615850e-47 |
| Msa0643300 | Msa1005870 | 0.830946 | 2.204646e-55 | -8.615850e-47 |
| Msa0643300 | Msa1018690 | 0.803822 | 2.901749e-49 | -8.615850e-47 |
| Msa0643300 | Msa1019430 | 0.800052 | 1.726945e-48 | -8.615850e-47 |
| Msa0643300 | Msa1019470 | 0.802433 | 5.622544e-49 | -8.615850e-47 |
| Msa0643300 | Msa1020510 | 0.831507 | 1.605356e-55 | -8.615850e-47 |
| Msa0643300 | Msa1020670 | 0.801863 | 7.367691e-49 | -8.615850e-47 |
| Msa0643300 | Msa1037640 | 0.803942 | 2.739559e-49 | -8.615850e-47 |
| Msa0643300 | Msa1045140 | 0.840189 | 1.009822e-57 | -8.615850e-47 |
| Msa0643300 | Msa1048920 | 0.802746 | 4.846065e-49 | -8.615850e-47 |
| Msa0643300 | Msa1050910 | 0.806574 | 7.699082e-50 | -8.615850e-47 |
| Msa0643300 | Msa1051830 | 0.800840 | 1.193411e-48 | -8.615850e-47 |
| Msa0643300 | Msa1063950 | 0.807215 | 5.636942e-50 | -8.615850e-47 |
| Msa0643300 | Msa1084960 | 0.805987 | 1.023651e-49 | -8.615850e-47 |
| Msa0643300 | Msa1091520 | 0.802312 | 5.956951e-49 | -8.615850e-47 |
| Msa0643300 | Msa1092010 | 0.831500 | 1.611648e-55 | -8.615850e-47 |
| Msa0643300 | Msa1096970 | 0.819246 | 1.284578e-52 | -8.615850e-47 |
| Msa0643300 | Msa1097640 | 0.804064 | 2.584769e-49 | -8.615850e-47 |
| Msa0643300 | Msa1108160 | 0.804711 | 1.894329e-49 | -8.615850e-47 |
| Msa0643300 | Msa1111090 | 0.804876 | 1.750220e-49 | -8.615850e-47 |
| Msa0643300 | Msa1113340 | 0.856607 | 2.870439e-62 | -8.615850e-47 |
| Msa0643300 | Msa1124110 | 0.802451 | 5.574384e-49 | -8.615850e-47 |
| Msa0643300 | Msa1125940 | 0.815571 | 8.636209e-52 | -8.615850e-47 |
| Msa0643300 | Msa1132840 | 0.823379 | 1.429405e-53 | -8.615850e-47 |
| Msa0643300 | Msa1135390 | 0.803146 | 4.006056e-49 | -8.615850e-47 |
| Msa0643300 | Msa1140210 | 0.842821 | 2.046336e-58 | -8.615850e-47 |
| Msa0643300 | Msa1151910 | 0.803755 | 2.996681e-49 | -8.615850e-47 |
| Msa0643300 | Msa1157870 | 0.841955 | 3.471261e-58 | -8.615850e-47 |
| Msa0643300 | Msa1161680 | 0.813081 | 3.066370e-51 | -8.615850e-47 |
| Msa0643300 | Msa1173330 | 0.805642 | 1.209880e-49 | -8.615850e-47 |
| Msa0643300 | Msa1182860 | 0.810148 | 1.331249e-50 | -8.615850e-47 |
| Msa0643300 | Msa1192090 | 0.813826 | 2.102336e-51 | -8.615850e-47 |
| Msa0643300 | Msa1196440 | 0.838010 | 3.706854e-57 | -8.615850e-47 |
| Msa0643300 | Msa1199570 | 0.807091 | 5.988334e-50 | -8.615850e-47 |
| Msa0643300 | Msa1202190 | 0.836050 | 1.174525e-56 | -8.615850e-47 |
| Msa0643300 | Msa1209460 | 0.834634 | 2.675411e-56 | -8.615850e-47 |
| Msa0643300 | Msa1225250 | 0.817748 | 2.806882e-52 | -8.615850e-47 |
| Msa0643300 | Msa1226520 | 0.802287 | 6.026828e-49 | -8.615850e-47 |
| Msa0643300 | Msa1232710 | 0.837034 | 6.594456e-57 | -8.615850e-47 |
| Msa0643300 | Msa1236100 | 0.801354 | 9.367962e-49 | -8.615850e-47 |
| Msa0643300 | Msa1252190 | 0.813427 | 2.573672e-51 | -8.615850e-47 |
| Msa0643300 | Msa1269480 | 0.802587 | 5.228061e-49 | -8.615850e-47 |
| Msa0643300 | Msa1272900 | 0.803905 | 2.788756e-49 | -8.615850e-47 |
| Msa0643300 | Msa1276660 | 0.824164 | 9.363392e-54 | -8.615850e-47 |
| Msa0643300 | Msa1292830 | 0.815420 | 9.328760e-52 | -8.615850e-47 |
| Msa0643300 | Msa1296410 | 0.808628 | 2.820483e-50 | -8.615850e-47 |
| Msa0643300 | Msa1303250 | 0.808069 | 3.711258e-50 | -8.615850e-47 |
| Msa0643300 | Msa1307570 | 0.815813 | 7.628914e-52 | -8.615850e-47 |
| Msa0643300 | Msa1313300 | 0.835857 | 1.314121e-56 | -8.615850e-47 |
| Msa0643300 | Msa1328710 | 0.806262 | 8.960813e-50 | -8.615850e-47 |
| Msa0643300 | Msa1347520 | 0.805961 | 1.036447e-49 | -8.615850e-47 |
| Msa0643300 | Msa1356830 | 0.837993 | 3.743954e-57 | -8.615850e-47 |
| Msa0643300 | Msa1361400 | 0.805674 | 1.190899e-49 | -8.615850e-47 |
| Msa0643300 | Msa1369150 | 0.832783 | 7.761498e-56 | -8.615850e-47 |
| Msa0643300 | Msa1372230 | 0.814818 | 1.268984e-51 | -8.615850e-47 |
| Msa0643300 | Msa1374040 | 0.817508 | 3.179453e-52 | -8.615850e-47 |
| Msa0643300 | Msa1374550 | 0.815146 | 1.073697e-51 | -8.615850e-47 |
| Msa0643300 | Msa1418090 | 0.812150 | 4.899855e-51 | -8.615850e-47 |
| Msa0643300 | Msa1422420 | 0.803257 | 3.799720e-49 | -8.615850e-47 |
| Msa0643300 | Msa1432950 | 0.800459 | 1.426785e-48 | -8.615850e-47 |
| Msa0643300 | Msa1437940 | 0.831150 | 1.964472e-55 | -8.615850e-47 |
| Msa0643300 | Msa1439610 | 0.804427 | 2.171696e-49 | -8.615850e-47 |
| Msa0643300 | Msa1440960 | 0.834151 | 3.537238e-56 | -8.615850e-47 |
| Msa0643300 | Msa1445190 | 0.822113 | 2.817583e-53 | -8.615850e-47 |
| Msa0643300 | Msa1446810 | 0.846295 | 2.376517e-59 | -8.615850e-47 |
| Msa0643300 | Msa1449930 | 0.808983 | 2.369084e-50 | -8.615850e-47 |
| Msa0643300 | Msa1454140 | 0.833518 | 5.092187e-56 | -8.615850e-47 |
| Msa0643300 | Msa1459380 | 0.844465 | 7.435736e-59 | -8.615850e-47 |
| Msa0643300 | Msa1465440 | 0.814846 | 1.251061e-51 | -8.615850e-47 |
| Msa0122970 | Msa0643300 | 0.811421 | 7.060908e-51 | -8.615850e-47 |
| Msa0134180 | Msa0643300 | 0.806384 | 8.446003e-50 | -8.615850e-47 |
| Msa0134610 | Msa0643300 | 0.817552 | 3.108165e-52 | -8.615850e-47 |
| Msa0136650 | Msa0643300 | 0.834414 | 3.038364e-56 | -8.615850e-47 |
| Msa0137880 | Msa0643300 | 0.808103 | 3.650561e-50 | -8.615850e-47 |
| Msa0144360 | Msa0643300 | 0.803137 | 4.023762e-49 | -8.615850e-47 |
| Msa0146260 | Msa0643300 | 0.817139 | 3.850514e-52 | -8.615850e-47 |
| Msa0150570 | Msa0643300 | 0.800574 | 1.351847e-48 | -8.615850e-47 |
| Msa0157290 | Msa0643300 | 0.815146 | 1.073606e-51 | -8.615850e-47 |
| Msa0167520 | Msa0643300 | 0.824925 | 6.197381e-54 | -8.615850e-47 |
| Msa0168500 | Msa0643300 | 0.822735 | 2.020329e-53 | -8.615850e-47 |
| Msa0173890 | Msa0643300 | 0.832304 | 1.020095e-55 | -8.615850e-47 |
| Msa0174450 | Msa0643300 | 0.821843 | 3.255059e-53 | -8.615850e-47 |
| Msa0180930 | Msa0643300 | 0.822653 | 2.110994e-53 | -8.615850e-47 |
| Msa0192540 | Msa0643300 | 0.802286 | 6.028382e-49 | -8.615850e-47 |
| Msa0197420 | Msa0643300 | 0.839471 | 1.554028e-57 | -8.615850e-47 |
| Msa0197930 | Msa0643300 | 0.805535 | 1.273614e-49 | -8.615850e-47 |
| Msa0205840 | Msa0643300 | 0.812103 | 5.017122e-51 | -8.615850e-47 |
| Msa0206840 | Msa0643300 | 0.813548 | 2.421273e-51 | -8.615850e-47 |
| Msa0213280 | Msa0643300 | 0.836881 | 7.216611e-57 | -8.615850e-47 |
| Msa0222560 | Msa0643300 | 0.824075 | 9.822740e-54 | -8.615850e-47 |
| Msa0225460 | Msa0643300 | 0.816688 | 4.860253e-52 | -8.615850e-47 |
| Msa0225680 | Msa0643300 | 0.831981 | 1.226508e-55 | -8.615850e-47 |
| Msa0225750 | Msa0643300 | 0.814385 | 1.582731e-51 | -8.615850e-47 |
| Msa0225860 | Msa0643300 | 0.809765 | 1.609914e-50 | -8.615850e-47 |
| Msa0376350 | Msa0643300 | 0.806808 | 6.870612e-50 | -8.615850e-47 |
| Msa0378720 | Msa0643300 | 0.817396 | 3.370053e-52 | -8.615850e-47 |
| Msa0380620 | Msa0643300 | 0.825460 | 4.632611e-54 | -8.615850e-47 |
| Msa0390970 | Msa0643300 | 0.813712 | 2.228128e-51 | -8.615850e-47 |
| Msa0392420 | Msa0643300 | 0.804740 | 1.868033e-49 | -8.615850e-47 |
| Msa0392460 | Msa0643300 | 0.807143 | 5.837278e-50 | -8.615850e-47 |
| Msa0392490 | Msa0643300 | 0.804543 | 2.053721e-49 | -8.615850e-47 |
| Msa0405710 | Msa0643300 | 0.821345 | 4.241225e-53 | -8.615850e-47 |
| Msa0410500 | Msa0643300 | 0.824565 | 7.535203e-54 | -8.615850e-47 |
| Msa0410650 | Msa0643300 | 0.807150 | 5.817188e-50 | -8.615850e-47 |
| Msa0417880 | Msa0643300 | 0.821623 | 3.660068e-53 | -8.615850e-47 |
| Msa0422850 | Msa0643300 | 0.803067 | 4.159385e-49 | -8.615850e-47 |
| Msa0422930 | Msa0643300 | 0.802618 | 5.150097e-49 | -8.615850e-47 |
| Msa0424790 | Msa0643300 | 0.809200 | 2.127955e-50 | -8.615850e-47 |
| Msa0428150 | Msa0643300 | 0.831896 | 1.287093e-55 | -8.615850e-47 |
| Msa0430260 | Msa0643300 | 0.841838 | 3.727204e-58 | -8.615850e-47 |
| Msa0447370 | Msa0643300 | 0.815799 | 7.682863e-52 | -8.615850e-47 |
| Msa0450440 | Msa0643300 | 0.815200 | 1.043985e-51 | -8.615850e-47 |
| Msa0461630 | Msa0643300 | 0.813619 | 2.335406e-51 | -8.615850e-47 |
| Msa0462500 | Msa0643300 | 0.833937 | 4.001511e-56 | -8.615850e-47 |
| Msa0467430 | Msa0643300 | 0.823145 | 1.621199e-53 | -8.615850e-47 |
| Msa0474730 | Msa0643300 | 0.810549 | 1.090965e-50 | -8.615850e-47 |
| Msa0475790 | Msa0643300 | 0.848665 | 5.302313e-60 | -8.615850e-47 |
| Msa0239190 | Msa0643300 | 0.826016 | 3.418719e-54 | -8.615850e-47 |
| Msa0239570 | Msa0643300 | 0.811028 | 8.591665e-51 | -8.615850e-47 |
| Msa0247940 | Msa0643300 | 0.806492 | 8.013961e-50 | -8.615850e-47 |
| Msa0248970 | Msa0643300 | 0.816985 | 4.169669e-52 | -8.615850e-47 |
| Msa0253700 | Msa0643300 | 0.847940 | 8.414635e-60 | -8.615850e-47 |
| Msa0255090 | Msa0643300 | 0.857764 | 1.306801e-62 | -8.615850e-47 |
| Msa0259380 | Msa0643300 | 0.856044 | 4.197507e-62 | -8.615850e-47 |
| Msa0261340 | Msa0643300 | 0.837551 | 4.863943e-57 | -8.615850e-47 |
| Msa0264870 | Msa0643300 | 0.800544 | 1.371503e-48 | -8.615850e-47 |
| Msa0267110 | Msa0643300 | 0.831820 | 1.343853e-55 | -8.615850e-47 |
| Msa0277180 | Msa0643300 | 0.815929 | 7.187453e-52 | -8.615850e-47 |
| Msa0292330 | Msa0643300 | 0.817462 | 3.257625e-52 | -8.615850e-47 |
| Msa0292400 | Msa0643300 | 0.873326 | 1.604045e-67 | -8.615850e-47 |
| Msa0294160 | Msa0643300 | 0.849705 | 2.723786e-60 | -8.615850e-47 |
| Msa0297790 | Msa0643300 | 0.804337 | 2.267742e-49 | -8.615850e-47 |
| Msa0298500 | Msa0643300 | 0.807644 | 4.570922e-50 | -8.615850e-47 |
| Msa0300270 | Msa0643300 | 0.805965 | 1.034876e-49 | -8.615850e-47 |
| Msa0300320 | Msa0643300 | 0.803002 | 4.291973e-49 | -8.615850e-47 |
| Msa0300690 | Msa0643300 | 0.825791 | 3.865030e-54 | -8.615850e-47 |
| Msa0301820 | Msa0643300 | 0.815701 | 8.077702e-52 | -8.615850e-47 |
| Msa0302170 | Msa0643300 | 0.814144 | 1.788916e-51 | -8.615850e-47 |
| Msa0316810 | Msa0643300 | 0.825942 | 3.559299e-54 | -8.615850e-47 |
| Msa0321920 | Msa0643300 | 0.813617 | 2.337930e-51 | -8.615850e-47 |
| Msa0337700 | Msa0643300 | 0.802919 | 4.464141e-49 | -8.615850e-47 |
| Msa0338510 | Msa0643300 | 0.809495 | 1.839217e-50 | -8.615850e-47 |
| Msa0339500 | Msa0643300 | 0.836394 | 9.602583e-57 | -8.615850e-47 |
| Msa0349710 | Msa0643300 | 0.800497 | 1.401723e-48 | -8.615850e-47 |
| Msa0487570 | Msa0643300 | 0.802826 | 4.666933e-49 | -8.615850e-47 |
| Msa0487630 | Msa0643300 | 0.810235 | 1.274828e-50 | -8.615850e-47 |
| Msa0500380 | Msa0643300 | 0.825071 | 5.724174e-54 | -8.615850e-47 |
| Msa0507680 | Msa0643300 | 0.803837 | 2.881098e-49 | -8.615850e-47 |
| Msa0513160 | Msa0643300 | 0.824375 | 8.349880e-54 | -8.615850e-47 |
| Msa0518690 | Msa0643300 | 0.807076 | 6.030467e-50 | -8.615850e-47 |
| Msa0527860 | Msa0643300 | 0.855292 | 6.959625e-62 | -8.615850e-47 |
| Msa0532070 | Msa0643300 | 0.841667 | 4.134959e-58 | -8.615850e-47 |
| Msa0535040 | Msa0643300 | 0.810327 | 1.218209e-50 | -8.615850e-47 |
| Msa0545340 | Msa0643300 | 0.829674 | 4.510322e-55 | -8.615850e-47 |
| Msa0546500 | Msa0643300 | 0.823821 | 1.126769e-53 | -8.615850e-47 |
| Msa0569200 | Msa0643300 | 0.815866 | 7.420939e-52 | -8.615850e-47 |
| Msa0574890 | Msa0643300 | 0.831536 | 1.579377e-55 | -8.615850e-47 |
| Msa0580370 | Msa0643300 | 0.820702 | 5.964483e-53 | -8.615850e-47 |
| Msa0582450 | Msa0643300 | 0.852841 | 3.543542e-61 | -8.615850e-47 |
| Msa0586190 | Msa0643300 | 0.853609 | 2.133525e-61 | -8.615850e-47 |
| Msa0594310 | Msa0643300 | 0.846666 | 1.881416e-59 | -8.615850e-47 |
| Msa0597790 | Msa0643300 | 0.805724 | 1.162765e-49 | -8.615850e-47 |
| Msa0600930 | Msa0643300 | 0.853416 | 2.425197e-61 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0643300 | MtrunA17_Chr4g0030031 | 95.759 | 613 | 17 | 1 | 1 | 604 | 8 | 620 | 0.0 | 1166 |
| Msa0643300 | MtrunA17_Chr7g0263701 | 44.884 | 606 | 300 | 6 | 11 | 601 | 21 | 607 | 9.25e-133 | 401 |
| Msa0643300 | MtrunA17_Chr1g0181611 | 43.902 | 615 | 281 | 9 | 7 | 601 | 13 | 583 | 5.10e-123 | 375 |
| Msa0643300 | MtrunA17_Chr2g0326021 | 52.573 | 447 | 159 | 9 | 172 | 604 | 128 | 535 | 1.27e-117 | 360 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0643300 | AT5G60210.2 | 43.760 | 617 | 274 | 14 | 1 | 604 | 8 | 564 | 3.69e-135 | 406 |
| Msa0643300 | AT5G60210.4 | 43.760 | 617 | 274 | 14 | 1 | 604 | 8 | 564 | 3.69e-135 | 406 |
| Msa0643300 | AT5G60210.1 | 43.760 | 617 | 274 | 14 | 1 | 604 | 8 | 564 | 3.69e-135 | 406 |
| Msa0643300 | AT5G60210.6 | 43.760 | 617 | 274 | 14 | 1 | 604 | 8 | 564 | 3.69e-135 | 406 |
| Msa0643300 | AT5G60210.5 | 43.760 | 617 | 274 | 14 | 1 | 604 | 32 | 588 | 2.01e-134 | 405 |
| Msa0643300 | AT5G60210.3 | 43.760 | 617 | 274 | 14 | 1 | 604 | 32 | 588 | 2.01e-134 | 405 |
| Msa0643300 | AT2G37080.3 | 39.720 | 642 | 279 | 14 | 2 | 604 | 9 | 581 | 5.33e-108 | 337 |
| Msa0643300 | AT2G37080.1 | 40.000 | 645 | 275 | 16 | 2 | 604 | 9 | 583 | 9.03e-108 | 336 |
| Msa0643300 | AT2G37080.2 | 40.000 | 645 | 275 | 16 | 2 | 604 | 9 | 583 | 9.03e-108 | 336 |
| Msa0643300 | AT3G53350.7 | 30.725 | 345 | 112 | 11 | 261 | 604 | 178 | 396 | 3.76e-23 | 102 |
| Msa0643300 | AT3G53350.7 | 38.764 | 178 | 87 | 4 | 2 | 171 | 9 | 172 | 5.43e-22 | 99.0 |
| Msa0643300 | AT3G53350.1 | 30.725 | 345 | 112 | 11 | 261 | 604 | 178 | 396 | 3.76e-23 | 102 |
| Msa0643300 | AT3G53350.1 | 38.764 | 178 | 87 | 4 | 2 | 171 | 9 | 172 | 5.43e-22 | 99.0 |
| Msa0643300 | AT3G53350.5 | 30.725 | 345 | 112 | 11 | 261 | 604 | 178 | 396 | 3.76e-23 | 102 |
| Msa0643300 | AT3G53350.5 | 38.764 | 178 | 87 | 4 | 2 | 171 | 9 | 172 | 5.43e-22 | 99.0 |
| Msa0643300 | AT3G53350.3 | 30.725 | 345 | 112 | 11 | 261 | 604 | 176 | 394 | 3.88e-23 | 102 |
| Msa0643300 | AT3G53350.3 | 39.205 | 176 | 87 | 5 | 2 | 171 | 9 | 170 | 1.58e-22 | 100 |
| Msa0643300 | AT3G53350.2 | 30.725 | 345 | 112 | 11 | 261 | 604 | 176 | 394 | 3.88e-23 | 102 |
| Msa0643300 | AT3G53350.2 | 39.205 | 176 | 87 | 5 | 2 | 171 | 9 | 170 | 1.58e-22 | 100 |
| Msa0643300 | AT3G53350.8 | 30.725 | 345 | 112 | 11 | 261 | 604 | 187 | 405 | 1.26e-22 | 100 |
| Msa0643300 | AT3G53350.8 | 39.205 | 176 | 87 | 5 | 2 | 171 | 20 | 181 | 3.20e-22 | 99.8 |
| Msa0643300 | AT3G53350.9 | 30.725 | 345 | 112 | 11 | 261 | 604 | 206 | 424 | 1.29e-22 | 101 |
| Msa0643300 | AT3G53350.9 | 44.167 | 120 | 53 | 1 | 52 | 171 | 95 | 200 | 9.23e-19 | 89.7 |
| Msa0643300 | AT3G53350.4 | 30.725 | 345 | 112 | 11 | 261 | 604 | 189 | 407 | 1.30e-22 | 100 |
| Msa0643300 | AT3G53350.4 | 38.764 | 178 | 87 | 4 | 2 | 171 | 20 | 183 | 1.10e-21 | 98.2 |
| Msa0643300 | AT3G53350.6 | 30.725 | 345 | 112 | 11 | 261 | 604 | 189 | 407 | 1.30e-22 | 100 |
| Msa0643300 | AT3G53350.6 | 38.764 | 178 | 87 | 4 | 2 | 171 | 20 | 183 | 1.10e-21 | 98.2 |
| Msa0643300 | AT1G78430.1 | 37.640 | 178 | 99 | 5 | 428 | 601 | 151 | 320 | 2.48e-18 | 87.0 |
| Msa0643300 | AT1G17140.1 | 34.254 | 181 | 98 | 4 | 433 | 601 | 169 | 340 | 4.94e-14 | 74.3 |
| Msa0643300 | AT1G17140.2 | 34.254 | 181 | 98 | 4 | 433 | 601 | 169 | 340 | 4.94e-14 | 74.3 |
Find 101 sgRNAs with CRISPR-Local
Find 131 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGATTTGTGCCTGAGTTTC+AGG | 0.158972 | 4_3:-46139731 | None:intergenic |
| CGGTCACCCTTGCCACTTTA+CGG | 0.281611 | 4_3:-46140585 | None:intergenic |
| AAAGAACCGTCGAGATTCTA+AGG | 0.289339 | 4_3:+46139789 | Msa0643300:CDS |
| GAGCAACTCTTAGCCCTATC+TGG | 0.309073 | 4_3:+46139368 | Msa0643300:CDS |
| TCAACATCTTCAGCATAATT+AGG | 0.312004 | 4_3:-46140793 | None:intergenic |
| TACTGAGAGATCTGTGTCTT+TGG | 0.319421 | 4_3:+46140744 | Msa0643300:CDS |
| TCTTAGTTCGCTTTCCATTT+CGG | 0.319511 | 4_3:-46140638 | None:intergenic |
| TGCTTTGTCTTCTGCATTGA+AGG | 0.331152 | 4_3:+46139541 | Msa0643300:CDS |
| ATAATTAGGTGAATACTTAT+AGG | 0.350218 | 4_3:-46140779 | None:intergenic |
| TGACTTGCGATCAGCGAGTT+TGG | 0.351529 | 4_3:-46138755 | None:intergenic |
| GGTAACATGCTGAAGAAGTT+TGG | 0.353831 | 4_3:+46140841 | Msa0643300:CDS |
| GCACGCGGAGAAACTTTCTT+AGG | 0.360740 | 4_3:-46138640 | None:intergenic |
| ATCTCTTCTTCAATATGATT+AGG | 0.361618 | 4_3:-46140016 | None:intergenic |
| CCCGAGCAAAATATCTGAAT+TGG | 0.366490 | 4_3:+46139238 | Msa0643300:CDS |
| TATTGTGATTTGTAAGCATT+AGG | 0.367462 | 4_3:+46141116 | Msa0643300:three_prime_UTR |
| CAGCAATGCGTACGAGTTGA+TGG | 0.372307 | 4_3:+46140135 | Msa0643300:CDS |
| CACTCAACTTTGCATTGCAT+TGG | 0.372439 | 4_3:+46141084 | Msa0643300:three_prime_UTR |
| TGAAGAAGTTTGGAGTCTTA+TGG | 0.383316 | 4_3:+46140851 | Msa0643300:CDS |
| GTTCTTTGCTATTCTTGAGT+TGG | 0.389004 | 4_3:-46139709 | None:intergenic |
| CAACTCCATTGCTTTGGAGT+TGG | 0.399162 | 4_3:+46139841 | Msa0643300:CDS |
| GGCAGCTGCTGCTATGATTT+CGG | 0.401359 | 4_3:+46140702 | Msa0643300:CDS |
| TCAAAAGGAACTCAAAAGAT+TGG | 0.417608 | 4_3:+46140351 | Msa0643300:CDS |
| TGGCTGCAACTCCATTGCTT+TGG | 0.418359 | 4_3:+46139835 | Msa0643300:CDS |
| CGCGAGGCGGTTACGAAACT+CGG | 0.423677 | 4_3:+46140532 | Msa0643300:CDS |
| GCTGAAAGCACAACTTGAAT+TGG | 0.425528 | 4_3:+46139574 | Msa0643300:CDS |
| GAAAGTGAAATATTGAGAAA+TGG | 0.426244 | 4_3:+46139986 | Msa0643300:CDS |
| AACTGATATTGAAGAGTTGA+AGG | 0.430741 | 4_3:+46140222 | Msa0643300:CDS |
| TGTTCTTTGAAGTCTGAGAT+TGG | 0.431751 | 4_3:+46140040 | Msa0643300:CDS |
| TATCTAGAGCTATGTGCTAC+TGG | 0.432289 | 4_3:+46139416 | Msa0643300:CDS |
| AGAGTTGAAGGCTAATCTAA+TGG | 0.435601 | 4_3:+46140234 | Msa0643300:CDS |
| CTTCAGCATCTCGTTCTCTT+CGG | 0.435786 | 4_3:-46140437 | None:intergenic |
| CCTCCAACTCACATTGTCTC+TGG | 0.446526 | 4_3:-46140180 | None:intergenic |
| AAATGAACATGGACTTCAAA+AGG | 0.449057 | 4_3:+46140336 | Msa0643300:CDS |
| GCAAGCTCAGCAAGACTTCG+AGG | 0.450128 | 4_3:+46139337 | Msa0643300:CDS |
| ACTCAACTTTGCATTGCATT+GGG | 0.453040 | 4_3:+46141085 | Msa0643300:three_prime_UTR |
| CATTAGGTGAAATTTGTAGT+AGG | 0.456956 | 4_3:+46141132 | Msa0643300:three_prime_UTR |
| GTTGATGGAGCAGATAAAAT+CGG | 0.470705 | 4_3:+46140150 | Msa0643300:CDS |
| GAGCAGATAAAATCGGAATC+AGG | 0.477930 | 4_3:+46140157 | Msa0643300:CDS |
| AACCGAGTTGCAAGGTATCA+TGG | 0.481196 | 4_3:+46140264 | Msa0643300:CDS |
| AAGCGAACTAAGAAGGCTTA+AGG | 0.481520 | 4_3:+46140648 | Msa0643300:CDS |
| TAGGGCTAAGAGTTGCTCCT+TGG | 0.485611 | 4_3:-46139363 | None:intergenic |
| TCAAACTCAACAAGCTGAAT+CGG | 0.486664 | 4_3:+46139616 | Msa0643300:CDS |
| CAGAAGTGGTTCTTCTGAAG+TGG | 0.492122 | 4_3:+46138615 | None:intergenic |
| ACAAGTGGCAAGCTCCGAAA+TGG | 0.492854 | 4_3:+46140624 | Msa0643300:CDS |
| TCATTCTGTTCAAAATCTTG+TGG | 0.494055 | 4_3:+46139943 | Msa0643300:CDS |
| GTCAACTGAGAGATGCTGTT+GGG | 0.495983 | 4_3:-46139513 | None:intergenic |
| GAAAATCAACAAGAGTTGCT+TGG | 0.499437 | 4_3:+46140462 | Msa0643300:CDS |
| CCAGAGACAATGTGAGTTGG+AGG | 0.499761 | 4_3:+46140180 | Msa0643300:CDS |
| TGATTTCGGCAGGGAACAAT+GGG | 0.505513 | 4_3:+46140716 | Msa0643300:CDS |
| ACTTCAAGATGATTTGAAGA+AGG | 0.507940 | 4_3:+46139277 | Msa0643300:CDS |
| GCTGCTGCTATGATTTCGGC+AGG | 0.511645 | 4_3:+46140706 | Msa0643300:CDS |
| ATGATTTCGGCAGGGAACAA+TGG | 0.513538 | 4_3:+46140715 | Msa0643300:CDS |
| TAGCAAAGAACCTGAAACTC+AGG | 0.524331 | 4_3:+46139721 | Msa0643300:CDS |
| CTTTGAAGTCTGAGATTGGA+CGG | 0.524621 | 4_3:+46140044 | Msa0643300:CDS |
| GACGTTGCGAGAGACGTAGA+TGG | 0.528471 | 4_3:+46139815 | Msa0643300:CDS |
| ACGTGATAGCGCATGGAAGT+CGG | 0.536408 | 4_3:+46139478 | Msa0643300:CDS |
| AAATGGAAAGCGAACTAAGA+AGG | 0.538764 | 4_3:+46140641 | Msa0643300:CDS |
| TTCCATGATACCTTGCAACT+CGG | 0.542413 | 4_3:-46140266 | None:intergenic |
| AGACAGAAGCAACCGTAAAG+TGG | 0.543135 | 4_3:+46140573 | Msa0643300:CDS |
| ATCAGAATCACTTTCTCAGA+TGG | 0.543609 | 4_3:+46139673 | Msa0643300:CDS |
| GCAGTTAGAAGCAGCACAAG+TGG | 0.544851 | 4_3:+46140609 | Msa0643300:CDS |
| TTGTGCTGCTTCTAACTGCT+CGG | 0.545994 | 4_3:-46140605 | None:intergenic |
| TTGTTCTTGATATTTAGTCT+CGG | 0.554617 | 4_3:-46140089 | None:intergenic |
| TGAAATATTGAGAAATGGAG+AGG | 0.570445 | 4_3:+46139991 | Msa0643300:CDS |
| AGATGATTTGAAGAAGGTGA+AGG | 0.573247 | 4_3:+46139283 | Msa0643300:CDS |
| AGGCCAGAGACAATGTGAGT+TGG | 0.574082 | 4_3:+46140177 | Msa0643300:CDS |
| AGTTGGAACATTCTAGAGCA+AGG | 0.576110 | 4_3:+46139858 | Msa0643300:CDS |
| CAGAAGAACGTGATAGCGCA+TGG | 0.577018 | 4_3:+46139471 | Msa0643300:CDS |
| ATGATTCAGACAAAATAAGC+TGG | 0.579255 | 4_3:-46139307 | None:intergenic |
| TCAAACTAGTAAAATATCAA+AGG | 0.580215 | 4_3:+46138723 | Msa0643300:CDS |
| GCAAGACTTCGAGGAATCCA+AGG | 0.582107 | 4_3:+46139346 | Msa0643300:CDS |
| TACGAAACTCGGGATTGTGA+TGG | 0.584576 | 4_3:+46140543 | Msa0643300:CDS |
| GAAACTCGGGATTGTGATGG+AGG | 0.585195 | 4_3:+46140546 | Msa0643300:CDS |
| ATGTTCCAACTCCAAAGCAA+TGG | 0.588382 | 4_3:-46139846 | None:intergenic |
| TTAAGGTACAGTCTGATCAA+TGG | 0.588594 | 4_3:+46140665 | Msa0643300:CDS |
| AGCCGAGGCTGCAAAACGCG+AGG | 0.589775 | 4_3:+46140516 | Msa0643300:CDS |
| CTTGAATTGGTAGCTACTTG+TGG | 0.590895 | 4_3:+46139587 | Msa0643300:CDS |
| TGAATTGAAAGCTGATATGA+TGG | 0.591704 | 4_3:+46140387 | Msa0643300:CDS |
| CGAAGAAGAAGATACAGAGT+CGG | 0.594385 | 4_3:-46138698 | None:intergenic |
| GGATGACAGTAAAGTGAGAG+AGG | 0.601699 | 4_3:+46140483 | Msa0643300:CDS |
| GAGTAGTCGTAGTTCTCAGT+TGG | 0.604285 | 4_3:-46138669 | None:intergenic |
| GGATGATTGTAAATTCGAGA+AGG | 0.605294 | 4_3:+46139964 | Msa0643300:CDS |
| AAGCAACCGTAAAGTGGCAA+GGG | 0.612662 | 4_3:+46140579 | Msa0643300:CDS |
| GTTGGAACATTCTAGAGCAA+GGG | 0.613738 | 4_3:+46139859 | Msa0643300:CDS |
| ATGTCATCACAAAATGAACA+TGG | 0.616779 | 4_3:+46140325 | Msa0643300:CDS |
| CTCAGTTGGCGTACAGCACG+CGG | 0.616898 | 4_3:-46138655 | None:intergenic |
| GACAAGGAAACCGAGTTGCA+AGG | 0.617966 | 4_3:+46140256 | Msa0643300:CDS |
| GAAGCAACCGTAAAGTGGCA+AGG | 0.619217 | 4_3:+46140578 | Msa0643300:CDS |
| GAAATTTGTAGTAGGTGTTG+TGG | 0.619946 | 4_3:+46141140 | Msa0643300:three_prime_UTR |
| CGAGGCTGCAAAACGCGAGG+CGG | 0.620966 | 4_3:+46140519 | Msa0643300:CDS |
| ACAGTCTGATCAATGGAGGA+AGG | 0.630704 | 4_3:+46140672 | Msa0643300:CDS |
| GCGAGGCGGTTACGAAACTC+GGG | 0.631591 | 4_3:+46140533 | Msa0643300:CDS |
| AGTCAACTGAGAGATGCTGT+TGG | 0.631624 | 4_3:-46139514 | None:intergenic |
| CAATTTACAATGCAATGCAA+AGG | 0.632590 | 4_3:-46140984 | None:intergenic |
| TCAATGGAGGAAGGCTGCAG+AGG | 0.637395 | 4_3:+46140681 | Msa0643300:CDS |
| GAAGGCTAATCTAATGGACA+AGG | 0.644778 | 4_3:+46140240 | Msa0643300:CDS |
| AGGTACAGTCTGATCAATGG+AGG | 0.656687 | 4_3:+46140668 | Msa0643300:CDS |
| GTCATCCCTTAGAATCTCGA+CGG | 0.658533 | 4_3:-46139795 | None:intergenic |
| CTGCTGCTATGATTTCGGCA+GGG | 0.663851 | 4_3:+46140707 | Msa0643300:CDS |
| AGAGGAAATAGAGAAAGCCG+AGG | 0.674506 | 4_3:+46140501 | Msa0643300:CDS |
| AAGAACCGTCGAGATTCTAA+GGG | 0.684529 | 4_3:+46139790 | Msa0643300:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAATGAAAGATAAATTAA+AGG | + | chr4_3:46138899-46138918 | Msa0643300:intron | 10.0% |
| !! | TTTATCTTTCATTATAGAAA+TGG | - | chr4_3:46138895-46138914 | None:intergenic | 15.0% |
| !! | TCAAACTAGTAAAATATCAA+AGG | + | chr4_3:46138723-46138742 | Msa0643300:CDS | 20.0% |
| !!! | CAGAAGTAGTATTTTATTAT+TGG | - | chr4_3:46138816-46138835 | None:intergenic | 20.0% |
| !! | AAAATCTTCTCAACTAAAAA+AGG | - | chr4_3:46139184-46139203 | None:intergenic | 20.0% |
| !!! | ATTCTGATAAGTTTTGATTT+AGG | - | chr4_3:46139661-46139680 | None:intergenic | 20.0% |
| !! | ATAATTAGGTGAATACTTAT+AGG | - | chr4_3:46140782-46140801 | None:intergenic | 20.0% |
| ! | CCAAACAAAGTCTATATTTA+AGG | - | chr4_3:46138840-46138859 | None:intergenic | 25.0% |
| ! | CCTTAAATATAGACTTTGTT+TGG | + | chr4_3:46138837-46138856 | Msa0643300:intron | 25.0% |
| !!! | ATTAAGTTGATTATCCAAAC+TGG | + | chr4_3:46139090-46139109 | Msa0643300:intron | 25.0% |
| !!! | TTAAGTTGATTATCCAAACT+GGG | + | chr4_3:46139091-46139110 | Msa0643300:intron | 25.0% |
| ! | TATAATTGATGTTGCATTAG+AGG | + | chr4_3:46139210-46139229 | Msa0643300:intron | 25.0% |
| ! | GAAAGTGAAATATTGAGAAA+TGG | + | chr4_3:46139986-46140005 | Msa0643300:CDS | 25.0% |
| ! | ATCTCTTCTTCAATATGATT+AGG | - | chr4_3:46140019-46140038 | None:intergenic | 25.0% |
| ! | TTGTTCTTGATATTTAGTCT+CGG | - | chr4_3:46140092-46140111 | None:intergenic | 25.0% |
| !!! | ACTGTTTGTTATGTTTTAGT+TGG | + | chr4_3:46141026-46141045 | Msa0643300:three_prime_UTR | 25.0% |
| !! | TATTGTGATTTGTAAGCATT+AGG | + | chr4_3:46141116-46141135 | Msa0643300:three_prime_UTR | 25.0% |
| ! | TCCAATTCAGATATTTTGCT+CGG | - | chr4_3:46139242-46139261 | None:intergenic | 30.0% |
| ACTTCAAGATGATTTGAAGA+AGG | + | chr4_3:46139277-46139296 | Msa0643300:CDS | 30.0% | |
| ATGATTCAGACAAAATAAGC+TGG | - | chr4_3:46139310-46139329 | None:intergenic | 30.0% | |
| TCATTCTGTTCAAAATCTTG+TGG | + | chr4_3:46139943-46139962 | Msa0643300:CDS | 30.0% | |
| TGAAATATTGAGAAATGGAG+AGG | + | chr4_3:46139991-46140010 | Msa0643300:CDS | 30.0% | |
| AACTGATATTGAAGAGTTGA+AGG | + | chr4_3:46140222-46140241 | Msa0643300:CDS | 30.0% | |
| ATGTCATCACAAAATGAACA+TGG | + | chr4_3:46140325-46140344 | Msa0643300:CDS | 30.0% | |
| AAATGAACATGGACTTCAAA+AGG | + | chr4_3:46140336-46140355 | Msa0643300:CDS | 30.0% | |
| TCAAAAGGAACTCAAAAGAT+TGG | + | chr4_3:46140351-46140370 | Msa0643300:CDS | 30.0% | |
| TGAATTGAAAGCTGATATGA+TGG | + | chr4_3:46140387-46140406 | Msa0643300:CDS | 30.0% | |
| TCAACATCTTCAGCATAATT+AGG | - | chr4_3:46140796-46140815 | None:intergenic | 30.0% | |
| GATTTCCAGAGAAAGAAAAA+TGG | + | chr4_3:46140820-46140839 | Msa0643300:CDS | 30.0% | |
| !! | TGTTACCATTTTTCTTTCTC+TGG | - | chr4_3:46140828-46140847 | None:intergenic | 30.0% |
| !!! | TCAATCAGTCACTATTTTTG+AGG | - | chr4_3:46140883-46140902 | None:intergenic | 30.0% |
| CAATTTACAATGCAATGCAA+AGG | - | chr4_3:46140987-46141006 | None:intergenic | 30.0% | |
| CATTAGGTGAAATTTGTAGT+AGG | + | chr4_3:46141132-46141151 | Msa0643300:three_prime_UTR | 30.0% | |
| !! | TGGTAAAAACTTGTTACCTC+AGG | - | chr4_3:46138796-46138815 | None:intergenic | 35.0% |
| AAGTTATACAATGCCCAGTT+TGG | - | chr4_3:46139107-46139126 | None:intergenic | 35.0% | |
| ! | CCAATTCAGATATTTTGCTC+GGG | - | chr4_3:46139241-46139260 | None:intergenic | 35.0% |
| AGATGATTTGAAGAAGGTGA+AGG | + | chr4_3:46139283-46139302 | Msa0643300:CDS | 35.0% | |
| TCAAACTCAACAAGCTGAAT+CGG | + | chr4_3:46139616-46139635 | Msa0643300:CDS | 35.0% | |
| ATCAGAATCACTTTCTCAGA+TGG | + | chr4_3:46139673-46139692 | Msa0643300:CDS | 35.0% | |
| !! | GTTCTTTGCTATTCTTGAGT+TGG | - | chr4_3:46139712-46139731 | None:intergenic | 35.0% |
| GGATGATTGTAAATTCGAGA+AGG | + | chr4_3:46139964-46139983 | Msa0643300:CDS | 35.0% | |
| !! | TGTTCTTTGAAGTCTGAGAT+TGG | + | chr4_3:46140040-46140059 | Msa0643300:CDS | 35.0% |
| ! | GTTGATGGAGCAGATAAAAT+CGG | + | chr4_3:46140150-46140169 | Msa0643300:CDS | 35.0% |
| AGAGTTGAAGGCTAATCTAA+TGG | + | chr4_3:46140234-46140253 | Msa0643300:CDS | 35.0% | |
| GAAAATCAACAAGAGTTGCT+TGG | + | chr4_3:46140462-46140481 | Msa0643300:CDS | 35.0% | |
| TCTTAGTTCGCTTTCCATTT+CGG | - | chr4_3:46140641-46140660 | None:intergenic | 35.0% | |
| AAATGGAAAGCGAACTAAGA+AGG | + | chr4_3:46140641-46140660 | Msa0643300:CDS | 35.0% | |
| TTAAGGTACAGTCTGATCAA+TGG | + | chr4_3:46140665-46140684 | Msa0643300:CDS | 35.0% | |
| ! | TGAAGAAGTTTGGAGTCTTA+TGG | + | chr4_3:46140851-46140870 | Msa0643300:CDS | 35.0% |
| ACTCAACTTTGCATTGCATT+GGG | + | chr4_3:46141085-46141104 | Msa0643300:three_prime_UTR | 35.0% | |
| ! | GAAATTTGTAGTAGGTGTTG+TGG | + | chr4_3:46141140-46141159 | Msa0643300:three_prime_UTR | 35.0% |
| CGAAGAAGAAGATACAGAGT+CGG | - | chr4_3:46138701-46138720 | None:intergenic | 40.0% | |
| !! | AACTTGTTACCTCAGGAACT+GGG | - | chr4_3:46138789-46138808 | None:intergenic | 40.0% |
| !! | AAACTTGTTACCTCAGGAAC+TGG | - | chr4_3:46138790-46138809 | None:intergenic | 40.0% |
| AAGCACTTGTGAGACTGTTT+GGG | - | chr4_3:46138980-46138999 | None:intergenic | 40.0% | |
| TAAGCACTTGTGAGACTGTT+TGG | - | chr4_3:46138981-46139000 | None:intergenic | 40.0% | |
| AGTCTCACAAGTGCTTATGT+CGG | + | chr4_3:46138984-46139003 | Msa0643300:intron | 40.0% | |
| CACATTGCTAGCATTGCTTT+CGG | + | chr4_3:46139149-46139168 | Msa0643300:intron | 40.0% | |
| CCCGAGCAAAATATCTGAAT+TGG | + | chr4_3:46139238-46139257 | Msa0643300:CDS | 40.0% | |
| !! | CTCTTCGAGTTTTCCAGATA+GGG | - | chr4_3:46139384-46139403 | None:intergenic | 40.0% |
| !! | ACTCTTCGAGTTTTCCAGAT+AGG | - | chr4_3:46139385-46139404 | None:intergenic | 40.0% |
| ! | TATCTAGAGCTATGTGCTAC+TGG | + | chr4_3:46139416-46139435 | Msa0643300:CDS | 40.0% |
| ! | CACGTTCTTCTGTGATTTTC+TGG | - | chr4_3:46139463-46139482 | None:intergenic | 40.0% |
| TGCTTTGTCTTCTGCATTGA+AGG | + | chr4_3:46139541-46139560 | Msa0643300:CDS | 40.0% | |
| ! | GCTGAAAGCACAACTTGAAT+TGG | + | chr4_3:46139574-46139593 | Msa0643300:CDS | 40.0% |
| ! | CTTGAATTGGTAGCTACTTG+TGG | + | chr4_3:46139587-46139606 | Msa0643300:CDS | 40.0% |
| TAGCAAAGAACCTGAAACTC+AGG | + | chr4_3:46139721-46139740 | Msa0643300:CDS | 40.0% | |
| AAGATTTGTGCCTGAGTTTC+AGG | - | chr4_3:46139734-46139753 | None:intergenic | 40.0% | |
| AAAGAACCGTCGAGATTCTA+AGG | + | chr4_3:46139789-46139808 | Msa0643300:CDS | 40.0% | |
| AAGAACCGTCGAGATTCTAA+GGG | + | chr4_3:46139790-46139809 | Msa0643300:CDS | 40.0% | |
| ATGTTCCAACTCCAAAGCAA+TGG | - | chr4_3:46139849-46139868 | None:intergenic | 40.0% | |
| !! | AGTTGGAACATTCTAGAGCA+AGG | + | chr4_3:46139858-46139877 | Msa0643300:CDS | 40.0% |
| !! | GTTGGAACATTCTAGAGCAA+GGG | + | chr4_3:46139859-46139878 | Msa0643300:CDS | 40.0% |
| !! | CTTTGAAGTCTGAGATTGGA+CGG | + | chr4_3:46140044-46140063 | Msa0643300:CDS | 40.0% |
| GAGCAGATAAAATCGGAATC+AGG | + | chr4_3:46140157-46140176 | Msa0643300:CDS | 40.0% | |
| ! | GAAGGCTAATCTAATGGACA+AGG | + | chr4_3:46140240-46140259 | Msa0643300:CDS | 40.0% |
| TTCCATGATACCTTGCAACT+CGG | - | chr4_3:46140269-46140288 | None:intergenic | 40.0% | |
| AAGCGAACTAAGAAGGCTTA+AGG | + | chr4_3:46140648-46140667 | Msa0643300:CDS | 40.0% | |
| TACTGAGAGATCTGTGTCTT+TGG | + | chr4_3:46140744-46140763 | Msa0643300:CDS | 40.0% | |
| GGTAACATGCTGAAGAAGTT+TGG | + | chr4_3:46140841-46140860 | Msa0643300:CDS | 40.0% | |
| CACTCAACTTTGCATTGCAT+TGG | + | chr4_3:46141084-46141103 | Msa0643300:three_prime_UTR | 40.0% | |
| GAGTAGTCGTAGTTCTCAGT+TGG | - | chr4_3:46138672-46138691 | None:intergenic | 45.0% | |
| GTCAACTGAGAGATGCTGTT+GGG | - | chr4_3:46139516-46139535 | None:intergenic | 45.0% | |
| AGTCAACTGAGAGATGCTGT+TGG | - | chr4_3:46139517-46139536 | None:intergenic | 45.0% | |
| GTCATCCCTTAGAATCTCGA+CGG | - | chr4_3:46139798-46139817 | None:intergenic | 45.0% | |
| !! | CAACTCCATTGCTTTGGAGT+TGG | + | chr4_3:46139841-46139860 | Msa0643300:CDS | 45.0% |
| ! | AACCGAGTTGCAAGGTATCA+TGG | + | chr4_3:46140264-46140283 | Msa0643300:CDS | 45.0% |
| CTTCAGCATCTCGTTCTCTT+CGG | - | chr4_3:46140440-46140459 | None:intergenic | 45.0% | |
| GGATGACAGTAAAGTGAGAG+AGG | + | chr4_3:46140483-46140502 | Msa0643300:CDS | 45.0% | |
| AGAGGAAATAGAGAAAGCCG+AGG | + | chr4_3:46140501-46140520 | Msa0643300:CDS | 45.0% | |
| TACGAAACTCGGGATTGTGA+TGG | + | chr4_3:46140543-46140562 | Msa0643300:CDS | 45.0% | |
| AGACAGAAGCAACCGTAAAG+TGG | + | chr4_3:46140573-46140592 | Msa0643300:CDS | 45.0% | |
| AAGCAACCGTAAAGTGGCAA+GGG | + | chr4_3:46140579-46140598 | Msa0643300:CDS | 45.0% | |
| !! | TTGTGCTGCTTCTAACTGCT+CGG | - | chr4_3:46140608-46140627 | None:intergenic | 45.0% |
| AGGTACAGTCTGATCAATGG+AGG | + | chr4_3:46140668-46140687 | Msa0643300:CDS | 45.0% | |
| ACAGTCTGATCAATGGAGGA+AGG | + | chr4_3:46140672-46140691 | Msa0643300:CDS | 45.0% | |
| ATGATTTCGGCAGGGAACAA+TGG | + | chr4_3:46140715-46140734 | Msa0643300:CDS | 45.0% | |
| TGATTTCGGCAGGGAACAAT+GGG | + | chr4_3:46140716-46140735 | Msa0643300:CDS | 45.0% | |
| GCACGCGGAGAAACTTTCTT+AGG | - | chr4_3:46138643-46138662 | None:intergenic | 50.0% | |
| ! | TGACTTGCGATCAGCGAGTT+TGG | - | chr4_3:46138758-46138777 | None:intergenic | 50.0% |
| GCAAGACTTCGAGGAATCCA+AGG | + | chr4_3:46139346-46139365 | Msa0643300:CDS | 50.0% | |
| TAGGGCTAAGAGTTGCTCCT+TGG | - | chr4_3:46139366-46139385 | None:intergenic | 50.0% | |
| GAGCAACTCTTAGCCCTATC+TGG | + | chr4_3:46139368-46139387 | Msa0643300:CDS | 50.0% | |
| ! | CAGAAGAACGTGATAGCGCA+TGG | + | chr4_3:46139471-46139490 | Msa0643300:CDS | 50.0% |
| ! | ACGTGATAGCGCATGGAAGT+CGG | + | chr4_3:46139478-46139497 | Msa0643300:CDS | 50.0% |
| TGGCTGCAACTCCATTGCTT+TGG | + | chr4_3:46139835-46139854 | Msa0643300:CDS | 50.0% | |
| ! | CAGCAATGCGTACGAGTTGA+TGG | + | chr4_3:46140135-46140154 | Msa0643300:CDS | 50.0% |
| AGGCCAGAGACAATGTGAGT+TGG | + | chr4_3:46140177-46140196 | Msa0643300:CDS | 50.0% | |
| CCTCCAACTCACATTGTCTC+TGG | - | chr4_3:46140183-46140202 | None:intergenic | 50.0% | |
| ! | CCAGAGACAATGTGAGTTGG+AGG | + | chr4_3:46140180-46140199 | Msa0643300:CDS | 50.0% |
| GACAAGGAAACCGAGTTGCA+AGG | + | chr4_3:46140256-46140275 | Msa0643300:CDS | 50.0% | |
| GAAACTCGGGATTGTGATGG+AGG | + | chr4_3:46140546-46140565 | Msa0643300:CDS | 50.0% | |
| GAAGCAACCGTAAAGTGGCA+AGG | + | chr4_3:46140578-46140597 | Msa0643300:CDS | 50.0% | |
| GCAGTTAGAAGCAGCACAAG+TGG | + | chr4_3:46140609-46140628 | Msa0643300:CDS | 50.0% | |
| ACAAGTGGCAAGCTCCGAAA+TGG | + | chr4_3:46140624-46140643 | Msa0643300:CDS | 50.0% | |
| GGCAGCTGCTGCTATGATTT+CGG | + | chr4_3:46140702-46140721 | Msa0643300:CDS | 50.0% | |
| CTGCTGCTATGATTTCGGCA+GGG | + | chr4_3:46140707-46140726 | Msa0643300:CDS | 50.0% | |
| ACCTCAGGAACTGGGCTTCT+GGG | - | chr4_3:46138781-46138800 | None:intergenic | 55.0% | |
| TACCTCAGGAACTGGGCTTC+TGG | - | chr4_3:46138782-46138801 | None:intergenic | 55.0% | |
| GCAAGCTCAGCAAGACTTCG+AGG | + | chr4_3:46139337-46139356 | Msa0643300:CDS | 55.0% | |
| GACGTTGCGAGAGACGTAGA+TGG | + | chr4_3:46139815-46139834 | Msa0643300:CDS | 55.0% | |
| !! | CGGTCACCCTTGCCACTTTA+CGG | - | chr4_3:46140588-46140607 | None:intergenic | 55.0% |
| TCAATGGAGGAAGGCTGCAG+AGG | + | chr4_3:46140681-46140700 | Msa0643300:CDS | 55.0% | |
| GCTGCTGCTATGATTTCGGC+AGG | + | chr4_3:46140706-46140725 | Msa0643300:CDS | 55.0% | |
| CTCAGTTGGCGTACAGCACG+CGG | - | chr4_3:46138658-46138677 | None:intergenic | 60.0% | |
| ACCCAGAAGCCCAGTTCCTG+AGG | + | chr4_3:46138777-46138796 | Msa0643300:intron | 60.0% | |
| CGCGAGGCGGTTACGAAACT+CGG | + | chr4_3:46140532-46140551 | Msa0643300:CDS | 60.0% | |
| GCGAGGCGGTTACGAAACTC+GGG | + | chr4_3:46140533-46140552 | Msa0643300:CDS | 60.0% | |
| AGCCGAGGCTGCAAAACGCG+AGG | + | chr4_3:46140516-46140535 | Msa0643300:CDS | 65.0% | |
| ! | CGCCTCGCGTTTTGCAGCCT+CGG | - | chr4_3:46140521-46140540 | None:intergenic | 65.0% |
| CGAGGCTGCAAAACGCGAGG+CGG | + | chr4_3:46140519-46140538 | Msa0643300:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 46138619 | 46141163 | 46138619 | ID=Msa0643300;Name=Msa0643300 |
| chr4_3 | mRNA | 46138619 | 46141163 | 46138619 | ID=Msa0643300-mRNA-1;Parent=Msa0643300;Name=Msa0643300-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0|0|1|0|0|2|272|604 |
| chr4_3 | exon | 46138619 | 46138773 | 46138619 | ID=Msa0643300-mRNA-1:exon:10699;Parent=Msa0643300-mRNA-1 |
| chr4_3 | exon | 46139232 | 46141163 | 46139232 | ID=Msa0643300-mRNA-1:exon:10700;Parent=Msa0643300-mRNA-1 |
| chr4_3 | CDS | 46138619 | 46138773 | 46138619 | ID=Msa0643300-mRNA-1:cds;Parent=Msa0643300-mRNA-1 |
| chr4_3 | CDS | 46139232 | 46140891 | 46139232 | ID=Msa0643300-mRNA-1:cds;Parent=Msa0643300-mRNA-1 |
| chr4_3 | three_prime_UTR | 46140892 | 46141163 | 46140892 | ID=Msa0643300-mRNA-1:three_prime_utr;Parent=Msa0643300-mRNA-1 |
| Gene Sequence |
| Protein sequence |
