AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0338510

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0338510 MtrunA17_Chr2g0326281 92.467 823 48 2 1 809 1 823 0.0 1535
Msa0338510 MtrunA17_Chr4g0029671 73.260 819 182 12 1 809 1 792 0.0 1142
Msa0338510 MtrunA17_Chr4g0046371 42.587 634 325 13 51 666 33 645 2.42e-148 451
Msa0338510 MtrunA17_Chr2g0282961 55.037 407 160 8 55 454 52 442 3.30e-141 430
Msa0338510 MtrunA17_Chr8g0385791 47.414 464 224 8 14 472 21 469 1.34e-136 425
Msa0338510 MtrunA17_Chr8g0385791 50.000 104 52 0 676 779 705 808 3.35e-30 128
Msa0338510 MtrunA17_Chr2g0276781 52.589 367 159 4 54 418 21 374 7.00e-127 395
Msa0338510 MtrunA17_Chr2g0276781 46.212 132 67 2 671 798 537 668 5.36e-28 120
Msa0338510 MtrunA17_Chr8g0346711 49.330 373 172 7 38 408 11 368 4.30e-113 359
Msa0338510 MtrunA17_Chr8g0346711 52.632 95 44 1 681 775 558 651 1.85e-24 109
Msa0338510 MtrunA17_Chr5g0433301 49.136 405 171 10 56 452 24 401 6.50e-113 363
Msa0338510 MtrunA17_Chr5g0433301 36.691 139 80 4 634 769 670 803 5.25e-19 92.4
Msa0338510 MtrunA17_Chr2g0285461 51.923 364 161 6 56 416 23 375 1.62e-112 364
Msa0338510 MtrunA17_Chr2g0285461 40.152 132 73 4 648 775 743 872 7.38e-21 98.6
Msa0338510 MtrunA17_Chr3g0109391 53.090 356 145 7 56 404 26 366 1.37e-111 360
Msa0338510 MtrunA17_Chr3g0109391 41.880 117 59 3 661 769 696 811 7.34e-19 92.0
Msa0338510 MtrunA17_Chr8g0376771 50.964 363 165 5 56 416 23 374 1.43e-110 359
Msa0338510 MtrunA17_Chr8g0376771 38.095 126 74 3 647 769 745 869 1.90e-19 94.0
Msa0338510 MtrunA17_Chr4g0009751 49.857 349 159 5 56 402 19 353 6.36e-109 346
Msa0338510 MtrunA17_Chr4g0009751 47.619 84 40 2 665 748 542 621 2.53e-15 80.1
Msa0338510 MtrunA17_Chr1g0156321 52.422 351 152 6 56 403 43 381 1.65e-108 352
Msa0338510 MtrunA17_Chr1g0156321 42.308 104 58 2 681 783 754 856 6.36e-18 89.0
Msa0338510 MtrunA17_Chr7g0239061 45.758 389 193 8 54 439 12 385 7.99e-108 345
Msa0338510 MtrunA17_Chr7g0239061 48.148 108 52 2 665 772 557 660 5.14e-24 107
Msa0338510 MtrunA17_Chr4g0070181 52.464 345 152 4 56 399 23 356 1.17e-102 342
Msa0338510 MtrunA17_Chr4g0070181 48.454 97 48 2 676 771 989 1084 3.22e-22 102
Msa0338510 MtrunA17_Chr2g0301251 51.304 345 156 4 56 399 23 356 5.42e-101 337
Msa0338510 MtrunA17_Chr2g0301251 48.454 97 48 2 676 771 981 1076 3.34e-21 99.8
Msa0338510 MtrunA17_Chr8g0389081 48.459 357 156 6 56 402 32 370 1.66e-92 313
Msa0338510 MtrunA17_Chr8g0389081 47.826 92 46 2 681 771 985 1075 1.24e-20 97.8
Msa0338510 MtrunA17_Chr2g0326761 41.732 381 168 10 56 398 11 375 1.74e-79 270
Msa0338510 MtrunA17_Chr1g0181211 37.410 417 199 9 56 428 27 425 1.64e-76 261
Msa0338510 MtrunA17_Chr1g0199681 38.144 388 191 6 56 408 94 467 6.59e-73 252
Msa0338510 MtrunA17_Chr4g0028971 38.035 397 186 7 56 408 12 392 8.59e-71 246
Msa0338510 MtrunA17_Chr7g0264171 36.650 412 197 10 56 418 31 427 1.04e-65 230
Msa0338510 MtrunA17_Chr7g0264161 39.241 316 175 7 65 378 1 301 8.24e-60 205
Msa0338510 MtrunA17_Chr3g0115271 36.573 391 194 10 56 406 19 395 1.36e-59 213
Msa0338510 MtrunA17_Chr8g0356211 42.795 229 123 3 176 402 2 224 1.21e-58 202
Msa0338510 MtrunA17_Chr5g0424931 33.090 411 221 12 36 415 2 389 3.66e-55 199
Msa0338510 MtrunA17_Chr5g0417281 34.146 369 207 12 56 416 11 351 1.80e-53 194
Msa0338510 MtrunA17_Chr5g0436761 34.748 377 203 12 56 420 12 357 7.70e-50 182
Msa0338510 MtrunA17_Chr5g0417211 35.342 365 189 15 56 410 12 339 1.51e-48 177
Msa0338510 MtrunA17_Chr2g0289221 33.234 334 180 9 56 378 20 321 1.05e-44 165
Msa0338510 MtrunA17_Chr1g0178011 28.726 369 239 7 56 420 12 360 5.43e-44 165
Msa0338510 MtrunA17_Chr2g0277461 29.091 385 248 8 56 437 13 375 1.87e-40 155
Msa0338510 MtrunA17_Chr5g0424741 30.052 386 224 14 56 408 12 384 3.68e-37 147
Msa0338510 MtrunA17_Chr2g0277531 31.250 336 191 15 51 378 15 318 8.52e-34 132
Msa0338510 MtrunA17_Chr5g0425661 33.014 209 128 3 56 264 37 233 2.20e-32 125
Msa0338510 MtrunA17_Chr5g0424801 28.652 356 223 11 56 402 12 345 2.04e-30 124
Msa0338510 MtrunA17_Chr5g0425261 29.412 357 219 13 56 402 12 345 4.70e-29 120
Msa0338510 MtrunA17_Chr1g0156301 36.667 90 41 2 681 770 177 250 3.64e-11 64.7
Msa0338510 MtrunA17_Chr7g0276471 36.111 108 68 1 166 273 116 222 3.66e-11 66.2
Msa0338510 MtrunA17_Chr1g0178071 30.247 162 107 3 167 322 75 236 5.62e-11 64.7
Msa0338510 MtrunA17_Chr8g0345771 36.697 109 67 2 154 262 158 264 7.22e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0338510 AT5G60450.2 58.670 767 273 12 50 809 35 764 0.0 832
Msa0338510 AT5G60450.1 58.716 763 271 12 54 809 63 788 0.0 829
Msa0338510 AT5G62000.2 36.848 863 437 21 14 806 29 853 7.74e-173 520
Msa0338510 AT5G62000.5 36.848 863 437 21 14 806 29 853 7.74e-173 520
Msa0338510 AT5G62000.3 36.848 863 437 21 14 806 29 853 7.74e-173 520
Msa0338510 AT5G62000.1 36.848 863 437 21 14 806 29 853 7.74e-173 520
Msa0338510 AT5G62000.4 37.620 832 416 20 14 775 29 827 1.78e-172 519
Msa0338510 AT2G33860.1 49.896 481 192 10 55 529 53 490 2.91e-147 446
Msa0338510 AT3G61830.1 47.475 396 185 8 43 430 12 392 1.82e-118 371
Msa0338510 AT3G61830.1 49.020 102 51 1 672 773 480 580 2.69e-24 108
Msa0338510 AT1G59750.4 50.000 366 168 5 56 418 22 375 8.99e-118 371
Msa0338510 AT1G59750.4 57.143 98 42 0 673 770 529 626 3.56e-29 124
Msa0338510 AT1G59750.2 50.000 366 168 5 56 418 22 375 1.36e-117 370
Msa0338510 AT1G59750.2 56.000 100 44 0 671 770 529 628 3.69e-29 124
Msa0338510 AT1G59750.1 50.000 366 168 5 56 418 22 375 1.66e-117 370
Msa0338510 AT1G59750.1 57.143 98 42 0 673 770 534 631 3.84e-29 124
Msa0338510 AT1G59750.3 50.000 366 168 5 56 418 22 375 1.66e-117 370
Msa0338510 AT1G59750.3 57.143 98 42 0 673 770 534 631 3.84e-29 124
Msa0338510 AT2G33860.2 50.138 363 151 5 167 529 1 333 4.51e-112 349
Msa0338510 AT2G46530.1 47.967 369 173 8 54 418 19 372 6.49e-112 354
Msa0338510 AT2G46530.1 44.000 125 65 2 645 769 458 577 4.04e-25 111
Msa0338510 AT2G46530.3 47.967 369 173 8 54 418 40 393 2.48e-111 353
Msa0338510 AT2G46530.3 44.000 125 65 2 645 769 479 598 5.80e-25 111
Msa0338510 AT5G37020.2 51.648 364 162 6 56 416 22 374 3.29e-111 357
Msa0338510 AT5G37020.2 52.174 69 31 2 681 748 705 772 2.79e-16 84.0
Msa0338510 AT5G37020.1 51.499 367 158 7 56 416 22 374 1.36e-110 357
Msa0338510 AT5G37020.1 47.778 90 45 2 681 769 705 793 2.08e-19 94.0
Msa0338510 AT1G30330.3 49.485 388 168 7 56 426 25 401 1.39e-110 360
Msa0338510 AT1G30330.3 46.078 102 51 3 671 769 784 884 8.78e-21 98.6
Msa0338510 AT1G30330.2 49.485 388 168 7 56 426 25 401 1.39e-110 360
Msa0338510 AT1G30330.2 46.078 102 51 3 671 769 784 884 8.78e-21 98.6
Msa0338510 AT1G30330.1 49.485 388 168 7 56 426 23 399 1.42e-110 360
Msa0338510 AT1G30330.1 46.078 102 51 3 671 769 782 882 9.23e-21 98.6
Msa0338510 AT4G23980.1 49.858 351 154 8 54 399 10 343 1.23e-105 338
Msa0338510 AT4G23980.1 53.000 100 46 1 673 772 515 613 3.63e-26 115
Msa0338510 AT4G23980.2 49.858 351 154 8 54 399 10 343 1.28e-105 338
Msa0338510 AT4G23980.2 53.000 100 46 1 673 772 513 611 3.73e-26 115
Msa0338510 AT3G61830.2 47.246 345 161 6 92 430 12 341 5.21e-103 329
Msa0338510 AT3G61830.2 49.020 102 51 1 672 773 429 529 1.78e-24 108
Msa0338510 AT1G19850.2 50.568 352 158 7 56 403 43 382 1.05e-102 338
Msa0338510 AT1G19850.2 44.444 99 53 2 673 770 774 871 1.67e-18 91.3
Msa0338510 AT1G19850.1 50.568 352 158 7 56 403 54 393 1.32e-102 337
Msa0338510 AT1G19850.1 44.444 99 53 2 673 770 785 882 1.72e-18 91.3
Msa0338510 AT1G19220.1 51.873 347 151 5 56 399 23 356 1.95e-100 335
Msa0338510 AT1G19220.1 46.018 113 55 3 676 783 953 1064 1.19e-22 104
Msa0338510 AT5G20730.2 51.297 347 153 5 56 399 24 357 7.84e-98 330
Msa0338510 AT5G20730.2 37.576 165 79 6 610 771 984 1127 1.13e-21 101
Msa0338510 AT5G20730.3 51.149 348 153 6 56 399 24 358 2.84e-96 325
Msa0338510 AT5G20730.3 37.576 165 79 6 610 771 985 1128 1.02e-21 101
Msa0338510 AT5G20730.1 51.149 348 153 6 56 399 24 358 4.73e-96 325
Msa0338510 AT5G20730.1 37.576 165 79 6 610 771 985 1128 1.11e-21 101
Msa0338510 AT1G35540.1 41.622 370 195 6 51 419 22 371 1.54e-89 295
Msa0338510 AT1G35540.1 50.000 100 49 1 670 769 499 597 1.15e-23 107
Msa0338510 AT1G34310.1 40.970 371 197 7 51 417 22 374 8.79e-87 287
Msa0338510 AT1G34310.1 48.624 109 54 2 653 760 482 589 9.56e-23 103
Msa0338510 AT1G34410.1 40.323 372 198 8 51 417 22 374 2.76e-86 286
Msa0338510 AT1G34410.1 52.632 95 44 1 673 767 503 596 2.74e-23 105
Msa0338510 AT5G37020.3 54.651 258 115 2 160 416 23 279 1.23e-85 287
Msa0338510 AT5G37020.3 47.778 90 45 2 681 769 610 698 1.50e-19 94.4
Msa0338510 AT1G35240.1 41.463 369 195 7 51 418 22 370 1.47e-85 284
Msa0338510 AT1G35240.1 51.579 95 45 1 673 767 489 582 7.84e-23 104
Msa0338510 AT1G34170.1 40.214 373 199 8 54 423 23 374 2.00e-85 281
Msa0338510 AT1G35520.1 41.463 369 195 7 51 418 22 370 1.91e-84 281
Msa0338510 AT1G35520.1 45.872 109 57 2 653 760 482 589 1.54e-21 100
Msa0338510 AT1G34390.1 41.406 384 199 10 51 430 22 383 4.02e-82 275
Msa0338510 AT1G34390.1 46.364 110 57 2 653 761 480 588 7.23e-21 98.2
Msa0338510 AT2G46530.2 49.042 261 127 4 160 418 29 285 4.48e-82 272
Msa0338510 AT2G46530.2 44.000 125 65 2 645 769 371 490 1.77e-25 111
Msa0338510 AT2G28350.2 39.277 415 197 7 56 428 10 411 2.11e-81 275
Msa0338510 AT2G28350.1 39.277 415 197 7 56 428 10 411 3.97e-81 275
Msa0338510 AT4G30080.1 39.031 392 187 8 56 410 19 395 1.10e-78 268
Msa0338510 AT1G34170.2 38.070 373 181 8 54 423 23 348 4.90e-74 249
Msa0338510 AT1G34170.3 38.070 373 181 8 54 423 23 348 4.29e-73 249
Msa0338510 AT1G34170.3 40.566 106 55 2 673 771 418 522 3.32e-18 89.4
Msa0338510 AT1G77850.2 29.668 482 277 10 57 502 20 475 1.92e-55 201
Msa0338510 AT1G77850.1 29.668 482 277 10 57 502 20 475 2.22e-55 201
Msa0338510 AT1G43950.1 43.578 218 105 5 51 267 22 222 1.73e-48 171
Msa0338510 AT2G46870.1 32.353 170 93 6 143 309 10 160 8.24e-12 67.8
Msa0338510 AT4G01500.1 38.043 92 54 1 166 257 34 122 8.60e-12 67.8
Msa0338510 AT1G01030.2 36.735 98 61 1 160 257 48 144 1.21e-11 67.4
Msa0338510 AT1G01030.1 36.735 98 61 1 160 257 48 144 1.65e-11 67.4
Msa0338510 AT1G13260.1 34.711 121 75 2 149 265 167 287 2.92e-11 66.2

Find 202 sgRNAs with CRISPR-Local

Find 342 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTATAGCTGACCTTCTTTC+TGG 0.139715 2_4:+58867978 None:intergenic
GTAAATCCTTGTAGACTATT+TGG 0.158429 2_4:-58866702 Msa0338510:CDS
AACCTCATCATTCTCCTTAT+TGG 0.160497 2_4:+58869562 None:intergenic
CTTCTTCTTGTGTATATATA+TGG 0.165929 2_4:+58865882 None:intergenic
AGCCAGAAGAATCTTGTTTC+TGG 0.202166 2_4:-58868512 Msa0338510:CDS
AACATTCTCTAGTTGGAAAT+TGG 0.212031 2_4:+58866887 None:intergenic
AGAAATGAAGTTGGAATATC+AGG 0.255023 2_4:-58866828 Msa0338510:CDS
AGCTGGAGACAGTGGGTTTA+TGG 0.268758 2_4:-58867372 Msa0338510:CDS
ACTACAACATTCCCTTTCTT+TGG 0.271823 2_4:+58869823 None:intergenic
TTCTTTGGAAGTGATGTTAA+AGG 0.285859 2_4:+58869838 None:intergenic
CCTGCAGCTTCTGCTTGTTT+CGG 0.298110 2_4:+58866796 None:intergenic
TTTGACTTGGGCCATTTATA+GGG 0.298149 2_4:+58867850 None:intergenic
CTTCATCTTATCTTGAACTA+TGG 0.312250 2_4:-58869876 Msa0338510:CDS
AAACTTAAATTTCACTCATT+AGG 0.320710 2_4:-58866996 Msa0338510:CDS
AGTGAACTAGAGAGACTATT+TGG 0.331029 2_4:-58866441 Msa0338510:CDS
GTGATTTGGATCCCTATAAA+TGG 0.335220 2_4:-58867861 Msa0338510:CDS
TTTCCATTAACAGGCCAATA+AGG 0.336836 2_4:-58869576 Msa0338510:intron
AAATTATTGACACATTCATT+TGG 0.344864 2_4:+58865333 None:intergenic
AGAGTGTCAAAGGTTAATTT+AGG 0.347842 2_4:+58870237 None:intergenic
GAAGTGGAGAAGATGACAAT+TGG 0.348700 2_4:-58865863 Msa0338510:CDS
CGGAAACGAACCGGTTTCCT+AGG 0.350274 2_4:-58867139 Msa0338510:CDS
TAGTTGGAAATTGGTTGGTT+TGG 0.350673 2_4:+58866896 None:intergenic
AATTATTGACACATTCATTT+GGG 0.358222 2_4:+58865334 None:intergenic
TGGTTACCAACAATTGATTC+AGG 0.358579 2_4:+58868295 None:intergenic
TCATTGGAAATTCCAACATA+TGG 0.359232 2_4:-58869748 Msa0338510:CDS
TTCACCTACCTCGATAAATA+TGG 0.367329 2_4:+58868659 None:intergenic
CTGCAGTGAGTTCTGTGTTA+TGG 0.372350 2_4:-58865915 Msa0338510:intron
ATTCAAAATGAAATTTGAAA+TGG 0.374517 2_4:-58868009 Msa0338510:CDS
TTGATCTAAACCTTAACTCT+TGG 0.379579 2_4:-58867067 Msa0338510:CDS
CCACCTGCTTCTAAACCTTC+AGG 0.382333 2_4:+58869113 None:intergenic
ATAAATGGCCCAAGTCAAAA+TGG 0.382489 2_4:-58867846 Msa0338510:CDS
CCCCAGAAACAAGATTCTTC+TGG 0.384844 2_4:+58868510 None:intergenic
GGGACGCAGTGCTCTTTCTA+AGG 0.386238 2_4:-58868490 Msa0338510:intron
TGATCTAAACCTTAACTCTT+GGG 0.391011 2_4:-58867066 Msa0338510:CDS
GCCAGAAGAATCTTGTTTCT+GGG 0.395328 2_4:-58868511 Msa0338510:CDS
TAATGAGTGAAATTTAAGTT+TGG 0.395394 2_4:+58866998 None:intergenic
TAAATGAAACATTCTCTAGT+TGG 0.401148 2_4:+58866880 None:intergenic
CACAAACAAGGGAGCTTAGT+TGG 0.402834 2_4:-58866510 Msa0338510:CDS
ATGTGAGAAGCTAACTTTGT+AGG 0.405019 2_4:+58869071 None:intergenic
TGACAGTGAAAATGACATTA+TGG 0.405346 2_4:-58866367 Msa0338510:CDS
TCAGTTAGCAGGGATGTGTT+TGG 0.410443 2_4:-58869147 Msa0338510:intron
GGTTTAGAAGCAGGTGGAGA+GGG 0.411642 2_4:-58869107 Msa0338510:CDS
ATTTCTGCTGCTGCTTCTCT+AGG 0.415866 2_4:-58866768 Msa0338510:CDS
TTGGTAAGGCACAACGAAAT+CGG 0.417321 2_4:+58868076 None:intergenic
CATACTAATCTTGCATCAAA+TGG 0.420961 2_4:-58867224 Msa0338510:CDS
GATTCAGGAAGACCGTTTCT+CGG 0.422054 2_4:+58868310 None:intergenic
TTAACATCACTTCCAAAGAA+AGG 0.425871 2_4:-58869835 Msa0338510:CDS
TGATGATAACCAGAGTTGTT+TGG 0.426706 2_4:-58865831 Msa0338510:CDS
TTGTGTTGCATTCAGTTAGC+AGG 0.431661 2_4:-58869158 Msa0338510:intron
GTCAAAATGGAGATGCTTGA+TGG 0.432058 2_4:-58867833 Msa0338510:intron
AAAATGACATTATGGTTGTT+GGG 0.432406 2_4:-58866359 Msa0338510:CDS
AGGATTCTCCATCCTTTGTC+AGG 0.432653 2_4:+58866396 None:intergenic
AAGTGGAGAAGATGACAATT+GGG 0.436343 2_4:-58865862 Msa0338510:CDS
AATACTCCTTCAGCTCAGAT+AGG 0.438938 2_4:-58866858 Msa0338510:CDS
TTCTAGTTATGCAGACTTCA+CGG 0.440375 2_4:-58867159 Msa0338510:CDS
GAACTATGGCATGCTTGTGC+TGG 0.440943 2_4:-58869862 Msa0338510:CDS
CAGACTTCACGGAAACGAAC+CGG 0.444346 2_4:-58867148 Msa0338510:CDS
ACTACTGTTGGAGAAGAATC+TGG 0.448069 2_4:+58865758 None:intergenic
TTAGATCAACCTTTCCTGCC+AGG 0.450136 2_4:+58867081 None:intergenic
AGTGACTGGAATGAGTGATT+TGG 0.450736 2_4:-58867875 Msa0338510:CDS
TTCTTGACCTTGCAAGACCT+TGG 0.450899 2_4:+58867325 None:intergenic
TCGACAAGATTGAATGTTCA+AGG 0.452440 2_4:+58867533 None:intergenic
ATCAAGATAGAGTCTCTCCT+TGG 0.455503 2_4:-58867584 Msa0338510:CDS
GGTCTTCCTGAATCAATTGT+TGG 0.457519 2_4:-58868301 Msa0338510:CDS
TTGGATTCATACCAGTGATA+AGG 0.459048 2_4:+58867463 None:intergenic
GCCTCTGATACCAGCACTCA+TGG 0.459057 2_4:-58869029 Msa0338510:CDS
GTGAAGTCTGCATAACTAGA+AGG 0.460590 2_4:+58867161 None:intergenic
ACACTAAGGATAAATTAGTC+TGG 0.461842 2_4:+58870175 None:intergenic
AAAAGTATGCTAAAAGCATC+AGG 0.463277 2_4:-58868055 Msa0338510:CDS
TAAGTTTGGTTGCATTATGC+AGG 0.464035 2_4:+58867012 None:intergenic
GAAGCAGGTGGAGAGGGAGA+TGG 0.465289 2_4:-58869101 Msa0338510:CDS
ACAACCCTACAAAAGATTTG+TGG 0.468787 2_4:+58869718 None:intergenic
TACTTTGCTTCCACAGGCAG+AGG 0.469813 2_4:-58869528 Msa0338510:intron
GGTGGTTTCCGCCGCCGATA+AGG 0.472069 2_4:+58866674 None:intergenic
TAACATCACTTCCAAAGAAA+GGG 0.474815 2_4:-58869834 Msa0338510:CDS
GTAGTGAGCAGATGCCTCCT+TGG 0.475837 2_4:+58868554 None:intergenic
TTCTCTAGTTGGAAATTGGT+TGG 0.476906 2_4:+58866891 None:intergenic
ACTTTGTGTATATCACCATA+TGG 0.477775 2_4:+58866945 None:intergenic
TGAAGATACAAGAGCTGAAG+TGG 0.479905 2_4:+58869894 None:intergenic
GAAAATGACATTATGGTTGT+TGG 0.484036 2_4:-58866360 Msa0338510:CDS
CTTGCAAGACCCTAGGAAAC+CGG 0.485163 2_4:+58867129 None:intergenic
TTTGAAGCCTCCACAATCAA+TGG 0.488117 2_4:+58865800 None:intergenic
TCCTAGTTTCCTTTCTTCAG+TGG 0.491250 2_4:-58868263 Msa0338510:CDS
TTTAGTAAAACTTACTGCCA+TGG 0.494050 2_4:+58866330 None:intergenic
AGGAGGCATCTGCTCACTAC+TGG 0.505121 2_4:-58868551 Msa0338510:CDS
CATACCAGTGATAAGGTGAC+TGG 0.506398 2_4:+58867470 None:intergenic
GGCATCTGCTCACTACTGGC+TGG 0.509364 2_4:-58868547 Msa0338510:CDS
AACTAGATTCTAACTACTGT+TGG 0.511297 2_4:+58865746 None:intergenic
TATATCACCATATGGAAAAG+AGG 0.512064 2_4:+58866953 None:intergenic
ATCTTGTCCCTATGGTCAGT+GGG 0.513478 2_4:+58868030 None:intergenic
GAGCCTGAAGGTTTAGAAGC+AGG 0.515631 2_4:-58869116 Msa0338510:CDS
GTGATATTACACAGGTCCGA+TGG 0.515735 2_4:-58867629 Msa0338510:intron
TCTCTATATAGGGGTGAAAA+CGG 0.516203 2_4:-58868367 Msa0338510:intron
ATAATTTGTGTAACTAACAT+TGG 0.517422 2_4:+58867037 None:intergenic
AATCTTGTCCCTATGGTCAG+TGG 0.518063 2_4:+58868029 None:intergenic
ATTGAGCAGCTACAATGATC+TGG 0.518918 2_4:-58866466 Msa0338510:CDS
TGAAAACGGAGAGTTAAGAT+TGG 0.519467 2_4:-58868353 Msa0338510:CDS
AGAGCTGCTCGACCGAGAAA+CGG 0.520377 2_4:-58868322 Msa0338510:CDS
TAAGAGATCCTGACAAAGGA+TGG 0.521003 2_4:-58866404 Msa0338510:CDS
CTTCTCTAGGTGCAAACTTG+AGG 0.522379 2_4:-58866755 Msa0338510:CDS
GAATTTCCAATGAAGAAAAG+AGG 0.523333 2_4:+58869758 None:intergenic
ATTGAGATCCCTGGCAGGAA+AGG 0.523346 2_4:-58867090 Msa0338510:CDS
TCTTGACCTTGCAAGACCCT+AGG 0.523482 2_4:+58867122 None:intergenic
GGTGCATTGAGAAATGAAGT+TGG 0.523787 2_4:-58866837 Msa0338510:CDS
TATATATACACAAGAAGAAG+TGG 0.530321 2_4:-58865879 Msa0338510:CDS
CTGGTTGTTATAATGAGTCT+CGG 0.531631 2_4:+58870194 None:intergenic
TCAAGATAGAGTCTCTCCTT+GGG 0.533378 2_4:-58867583 Msa0338510:CDS
TGAATGAAGGTTCACAAACA+AGG 0.534840 2_4:-58866522 Msa0338510:intron
TCAGGAACCCACTGACCATA+GGG 0.535798 2_4:-58868037 Msa0338510:CDS
TAGCATTAGCCACTGAAGAA+AGG 0.540509 2_4:+58868254 None:intergenic
ATTCTTCTTAACTTGAGTTG+TGG 0.542039 2_4:+58870005 None:intergenic
CCGAAACAAGCAGAAGCTGC+AGG 0.542656 2_4:-58866796 Msa0338510:CDS
ACAGGTTACTTTGCTTCCAC+AGG 0.543725 2_4:-58869534 Msa0338510:CDS
TAGATCAACCTTTCCTGCCA+GGG 0.544208 2_4:+58867082 None:intergenic
TGTAGTAGCGGTATAGTGAC+TGG 0.545183 2_4:-58867889 Msa0338510:CDS
TATGGTGATATACACAAAGT+TGG 0.548146 2_4:-58866942 Msa0338510:CDS
GAAAACGGAGAGTTAAGATT+GGG 0.548310 2_4:-58868352 Msa0338510:CDS
TGGATGAATCTCCAGAAAGA+AGG 0.548781 2_4:-58867989 Msa0338510:intron
TTTCCTGCCAGGGATCTCAA+TGG 0.549270 2_4:+58867092 None:intergenic
GAGAGACTATTTGGCATGGA+AGG 0.550692 2_4:-58866432 Msa0338510:CDS
GCTCAATCTTGAGAGATCAA+TGG 0.551608 2_4:+58866482 None:intergenic
CCTCGATATAAGAGTGTCAA+AGG 0.552638 2_4:+58870227 None:intergenic
AATATATCCATTGAGATCCC+TGG 0.553252 2_4:-58867099 Msa0338510:CDS
GGAACATACACCATTGATTG+TGG 0.553625 2_4:-58865810 Msa0338510:CDS
AGGCTGAAGAAACTGCGGAC+GGG 0.554562 2_4:-58867510 Msa0338510:CDS
TACACAGGTCCGATGGGATG+AGG 0.555224 2_4:-58867622 Msa0338510:intron
GGAAACTAGGAGAACAACTC+TGG 0.556326 2_4:+58868275 None:intergenic
TGAACATTCAATCTTGTCGA+AGG 0.558866 2_4:-58867530 Msa0338510:CDS
AGGCTGAACCCTCGTAAACT+CGG 0.559216 2_4:+58867181 None:intergenic
AGAAAACCCTCCATGAGTGC+TGG 0.560225 2_4:+58869019 None:intergenic
TGTGTTGCATTCAGTTAGCA+GGG 0.565461 2_4:-58869157 Msa0338510:intron
GAAAATCCAAATAGTCTACA+AGG 0.566058 2_4:+58866696 None:intergenic
GCTTCAAAGTCTTCCTCAGT+GGG 0.567657 2_4:-58865785 Msa0338510:CDS
TGTGGTTGAAGACCATATGT+TGG 0.568873 2_4:+58869736 None:intergenic
CCAGAAGAATCTTGTTTCTG+GGG 0.569533 2_4:-58868510 Msa0338510:CDS
TGATATTACACAGGTCCGAT+GGG 0.571325 2_4:-58867628 Msa0338510:intron
AAGAAGAATACATGTTGCAA+TGG 0.571777 2_4:-58869991 Msa0338510:CDS
CCGATGGGATGAGGATATTG+AGG 0.572780 2_4:-58867613 Msa0338510:CDS
GCCACTGAAGAAAGGAAACT+AGG 0.575196 2_4:+58868262 None:intergenic
CGACAAGATTGAATGTTCAA+GGG 0.577787 2_4:+58867534 None:intergenic
GTGTATGTTCCAAACAACTC+TGG 0.578457 2_4:+58865822 None:intergenic
TGGTTGTTGGGGATGATCCA+TGG 0.581281 2_4:-58866347 Msa0338510:CDS
TCACCCAGTCACCTTATCAC+TGG 0.584443 2_4:-58867474 Msa0338510:intron
ATCAGGAACCCACTGACCAT+AGG 0.589785 2_4:-58868038 Msa0338510:CDS
GCATGCATGGCTGAAACTCA+CGG 0.592234 2_4:-58865594 Msa0338510:intron
TATCCATTGAGATCCCTGGC+AGG 0.592828 2_4:-58867095 Msa0338510:CDS
AATTTCCAATGAAGAAAAGA+GGG 0.594214 2_4:+58869759 None:intergenic
TTCATCGCAGCTGGAGACAG+TGG 0.594260 2_4:-58867380 Msa0338510:intron
AGGTTTAGAAGCAGGTGGAG+AGG 0.594537 2_4:-58869108 Msa0338510:CDS
ATTTCCACTCCACACCATGC+AGG 0.596067 2_4:+58868686 None:intergenic
TCATCGCAGCTGGAGACAGT+GGG 0.597361 2_4:-58867379 Msa0338510:intron
AATGCACCTATCTGAGCTGA+AGG 0.597701 2_4:+58866852 None:intergenic
CGGTTTCCTAGGGTCTTGCA+AGG 0.598452 2_4:-58867128 Msa0338510:CDS
TATAGACAAAGTCGCATGCA+TGG 0.598979 2_4:-58865607 Msa0338510:three_prime_UTR
AATCTTTGTCAGGTCAGCCA+AGG 0.599067 2_4:-58868571 Msa0338510:intron
AAGATTGAATGTTCAAGGGA+GGG 0.602810 2_4:+58867538 None:intergenic
TCCATGAGTGCTGGTATCAG+AGG 0.602998 2_4:+58869028 None:intergenic
TTACTTCTTCCGAGTTTACG+AGG 0.603395 2_4:-58867190 Msa0338510:CDS
GATATACACAAAGTTGGTCA+AGG 0.608483 2_4:-58866936 Msa0338510:CDS
GATCTAAACCTTAACTCTTG+GGG 0.609198 2_4:-58867065 Msa0338510:CDS
AAATGACATTATGGTTGTTG+GGG 0.611574 2_4:-58866358 Msa0338510:CDS
TTTGCAACAAGCTCTTGAGA+GGG 0.613596 2_4:+58868712 None:intergenic
CCTTTGACACTCTTATATCG+AGG 0.613881 2_4:-58870227 Msa0338510:five_prime_UTR
GGCTTCAAAGTCTTCCTCAG+TGG 0.617874 2_4:-58865786 Msa0338510:CDS
GGAAACGAACCGGTTTCCTA+GGG 0.618178 2_4:-58867138 Msa0338510:CDS
AGATCGACCAAGGTCTTGCA+AGG 0.618905 2_4:-58867332 Msa0338510:CDS
TGTCATACTCATACCAAAGG+AGG 0.620459 2_4:+58868966 None:intergenic
CTGATACCAGCACTCATGGA+GGG 0.625106 2_4:-58869025 Msa0338510:CDS
CCTCAATATCCTCATCCCAT+CGG 0.625293 2_4:+58867613 None:intergenic
CTTTGTCAGGTCAGCCAAGG+AGG 0.625815 2_4:-58868568 Msa0338510:intron
ACTTGTTCCAAATGACCTTG+TGG 0.628653 2_4:+58869793 None:intergenic
TTGGATGACAAAGAGCCTGA+AGG 0.629150 2_4:-58869128 Msa0338510:CDS
GAATGAAGGTTCACAAACAA+GGG 0.629502 2_4:-58866521 Msa0338510:intron
CAAGATTGAATGTTCAAGGG+AGG 0.630768 2_4:+58867537 None:intergenic
ACTAGAGAGACTATTTGGCA+TGG 0.631155 2_4:-58866436 Msa0338510:CDS
TACTTCTTCCGAGTTTACGA+GGG 0.633533 2_4:-58867189 Msa0338510:CDS
ATAAAACAAACCTCTGCCTG+TGG 0.635072 2_4:+58869518 None:intergenic
CCTGAAGGTTTAGAAGCAGG+TGG 0.635598 2_4:-58869113 Msa0338510:CDS
AAGGGAGGGAGAGAAGTAGA+CGG 0.635894 2_4:+58867552 None:intergenic
GAATGATGAGGTTTACACAC+AGG 0.638216 2_4:-58869552 Msa0338510:CDS
TGCAAAAGACCTGCATGGTG+TGG 0.639765 2_4:-58868695 Msa0338510:CDS
GATTATATTGCATAGAGACA+AGG 0.642392 2_4:+58865712 None:intergenic
AAGACCTGCATGGTGTGGAG+TGG 0.642527 2_4:-58868690 Msa0338510:CDS
ACATACACCATTGATTGTGG+AGG 0.643124 2_4:-58865807 Msa0338510:CDS
ATGTCTTGCAGGTGTAGTAG+CGG 0.648254 2_4:-58867901 Msa0338510:intron
CTTCTAAGAGATCCTGACAA+AGG 0.649192 2_4:-58866408 Msa0338510:CDS
AACTCACATACACAATTGTG+AGG 0.650691 2_4:-58865370 Msa0338510:intron
AAGGCTGAAGAAACTGCGGA+CGG 0.656866 2_4:-58867511 Msa0338510:CDS
TGCTAAAAGAAGTTGCACGA+AGG 0.662737 2_4:-58866631 Msa0338510:intron
AAATTTCGCCATATTTATCG+AGG 0.663380 2_4:-58868667 Msa0338510:intron
GTAGACGGATCGATCTCCCA+AGG 0.663808 2_4:+58867567 None:intergenic
GGCCAATAAGGAGAATGATG+AGG 0.666485 2_4:-58869564 Msa0338510:CDS
ATACCAGTGATAAGGTGACT+GGG 0.667650 2_4:+58867471 None:intergenic
AAACTGCGAGAAAATTGTGA+GGG 0.670150 2_4:-58870138 Msa0338510:five_prime_UTR
GTCGAAGGCTGAAGAAACTG+CGG 0.672621 2_4:-58867515 Msa0338510:CDS
GAACTAGAAGATGAACATGC+TGG 0.678927 2_4:+58869916 None:intergenic
TAAACTGCGAGAAAATTGTG+AGG 0.681112 2_4:-58870139 Msa0338510:five_prime_UTR
CAATCTTCAGCAGCTCGACG+AGG 0.685556 2_4:+58868993 None:intergenic
TCTGATACCAGCACTCATGG+AGG 0.685802 2_4:-58869026 Msa0338510:CDS
TGAGTCTATAAGATCGACCA+AGG 0.694503 2_4:-58867342 Msa0338510:CDS
CTTGTTGCAAAAGACCTGCA+TGG 0.711702 2_4:-58868700 Msa0338510:CDS
AGAATCTGGCTGTCCCACTG+AGG 0.716343 2_4:+58865772 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATATTTATACTGATTTAA+TGG + chr2_4:58869333-58869352 None:intergenic 10.0%
!!! ATTTAGGTATTATTTTTTGT+CGG + chr2_4:58865338-58865357 None:intergenic 15.0%
!! AACATATTAAATATACATGT+GGG + chr2_4:58867462-58867481 None:intergenic 15.0%
!! AAACATATTAAATATACATG+TGG + chr2_4:58867463-58867482 None:intergenic 15.0%
!! ATTCAAAATGAAATTTGAAA+TGG - chr2_4:58867579-58867598 Msa0338510:CDS 15.0%
!! TATTAATGTAATGTTTAGAA+AGG + chr2_4:58867895-58867914 None:intergenic 15.0%
!!! ATTTGAAATATAATATCACA+AGG + chr2_4:58869555-58869574 None:intergenic 15.0%
!! TGATATTATATTTCAAATGT+CGG - chr2_4:58869557-58869576 Msa0338510:CDS 15.0%
!!! TGTATATTTTTTCCATTAAC+AGG - chr2_4:58866003-58866022 Msa0338510:intron 20.0%
!!! GTTTTATGGTTTAACATATT+TGG - chr2_4:58866086-58866105 Msa0338510:intron 20.0%
!!! AGTTTTATGTCACTATATTA+TGG - chr2_4:58868292-58868311 Msa0338510:CDS 20.0%
!!! ATAATTTGTGTAACTAACAT+TGG + chr2_4:58868554-58868573 None:intergenic 20.0%
!!! TAATGAGTGAAATTTAAGTT+TGG + chr2_4:58868593-58868612 None:intergenic 20.0%
!! AAACTTAAATTTCACTCATT+AGG - chr2_4:58868592-58868611 Msa0338510:intron 20.0%
!! ATTCATATCACAATATAACT+CGG + chr2_4:58868999-58869018 None:intergenic 20.0%
!! ATGTAATATACAATGAATGA+AGG - chr2_4:58869053-58869072 Msa0338510:CDS 20.0%
!!! TTCTTTTGTCTATTTGTAAA+TGG - chr2_4:58869286-58869305 Msa0338510:intron 20.0%
!! ATTTCAAAATATCGATCTAA+TGG - chr2_4:58869349-58869368 Msa0338510:intron 20.0%
!! ACCATTGAATAAATATCATA+TGG - chr2_4:58869474-58869493 Msa0338510:intron 20.0%
!! ACCATATGATATTTATTCAA+TGG + chr2_4:58869478-58869497 None:intergenic 20.0%
!! GATATTATATTTCAAATGTC+GGG - chr2_4:58869558-58869577 Msa0338510:CDS 20.0%
!! AATTATTGACACATTCATTT+GGG + chr2_4:58870257-58870276 None:intergenic 20.0%
!! AAATTATTGACACATTCATT+TGG + chr2_4:58870258-58870277 None:intergenic 20.0%
!! TTTTTGTCGGATACTAAATT+GGG + chr2_4:58865325-58865344 None:intergenic 25.0%
!!! TTTTTTGTCGGATACTAAAT+TGG + chr2_4:58865326-58865345 None:intergenic 25.0%
!!! AGTCTGATATTTTTACACTA+AGG + chr2_4:58865430-58865449 None:intergenic 25.0%
!!! TTAACACCAACAATGTTTTT+TGG + chr2_4:58865542-58865561 None:intergenic 25.0%
!!! AAAAACATTGTTGGTGTTAA+TGG - chr2_4:58865542-58865561 Msa0338510:intron 25.0%
! AATTTCCAATGAAGAAAAGA+GGG + chr2_4:58865832-58865851 None:intergenic 25.0%
!! ATTTCTTTCTTGATGCATTT+TGG - chr2_4:58866116-58866135 Msa0338510:intron 25.0%
!!! TTGGTTTTCTTCTAAAACAT+TGG - chr2_4:58866140-58866159 Msa0338510:intron 25.0%
! TCATGTATAACACTAGTATT+TGG + chr2_4:58866363-58866382 None:intergenic 25.0%
!!! CTGTTTATTTTCACTTCTTT+AGG - chr2_4:58866836-58866855 Msa0338510:CDS 25.0%
! TGAAACAGAAATATTGTGAT+TGG - chr2_4:58866948-58866967 Msa0338510:CDS 25.0%
!!! TTTCTTGTTTTGCAAAATGT+TGG - chr2_4:58867419-58867438 Msa0338510:intron 25.0%
! ATGTTGTAGAATACAGATAA+TGG + chr2_4:58867655-58867674 None:intergenic 25.0%
! TTACGATCGTATTATACATT+TGG - chr2_4:58867820-58867839 Msa0338510:intron 25.0%
! ATTTAGTTATCTCGTACATT+TGG + chr2_4:58868147-58868166 None:intergenic 25.0%
! TAAATGAAACATTCTCTAGT+TGG + chr2_4:58868711-58868730 None:intergenic 25.0%
!! ACTATTTGGATTTTCCTTAT+CGG - chr2_4:58868900-58868919 Msa0338510:intron 25.0%
! ATTGTATATTACATATGCGT+TGG + chr2_4:58869047-58869066 None:intergenic 25.0%
! AAAATGACATTATGGTTGTT+GGG - chr2_4:58869229-58869248 Msa0338510:intron 25.0%
! ATAGGATAGAATGATTCAAT+AGG + chr2_4:58869598-58869617 None:intergenic 25.0%
! CTATCCTATGTAACATATTA+TGG - chr2_4:58869609-58869628 Msa0338510:intron 25.0%
! TCATCCATAATATGTTACAT+AGG + chr2_4:58869616-58869635 None:intergenic 25.0%
! CTTCTTCTTGTGTATATATA+TGG + chr2_4:58869709-58869728 None:intergenic 25.0%
! TATATATACACAAGAAGAAG+TGG - chr2_4:58869709-58869728 Msa0338510:CDS 25.0%
! CCAAACAAAAATATATTGAC+AGG + chr2_4:58869959-58869978 None:intergenic 25.0%
!!! CCTGTCAATATATTTTTGTT+TGG - chr2_4:58869956-58869975 Msa0338510:CDS 25.0%
! AGAGTGTCAAAGGTTAATTT+AGG + chr2_4:58865354-58865373 None:intergenic 30.0%
ACACTAAGGATAAATTAGTC+TGG + chr2_4:58865416-58865435 None:intergenic 30.0%
AACCAACCAAAAAACATTGT+TGG - chr2_4:58865533-58865552 Msa0338510:intron 30.0%
! ATTCTTCTTAACTTGAGTTG+TGG + chr2_4:58865586-58865605 None:intergenic 30.0%
AAGAAGAATACATGTTGCAA+TGG - chr2_4:58865597-58865616 Msa0338510:three_prime_UTR 30.0%
CTTCATCTTATCTTGAACTA+TGG - chr2_4:58865712-58865731 Msa0338510:three_prime_UTR 30.0%
! TTCTTTGGAAGTGATGTTAA+AGG + chr2_4:58865753-58865772 None:intergenic 30.0%
TTAACATCACTTCCAAAGAA+AGG - chr2_4:58865753-58865772 Msa0338510:CDS 30.0%
TAACATCACTTCCAAAGAAA+GGG - chr2_4:58865754-58865773 Msa0338510:CDS 30.0%
!! GTTGTAGTTTATTTTCCACA+AGG - chr2_4:58865780-58865799 Msa0338510:CDS 30.0%
! TTATTTTCCACAAGGTCATT+TGG - chr2_4:58865788-58865807 Msa0338510:CDS 30.0%
GAATTTCCAATGAAGAAAAG+AGG + chr2_4:58865833-58865852 None:intergenic 30.0%
TCATTGGAAATTCCAACATA+TGG - chr2_4:58865840-58865859 Msa0338510:CDS 30.0%
! TTCAACCACAAATCTTTTGT+AGG - chr2_4:58865865-58865884 Msa0338510:CDS 30.0%
! TCAACCACAAATCTTTTGTA+GGG - chr2_4:58865866-58865885 Msa0338510:CDS 30.0%
!!! TTTCTTGATGCATTTTGGTT+TGG - chr2_4:58866121-58866140 Msa0338510:intron 30.0%
!! TCTAAAACATTGGCAAGTTT+TGG - chr2_4:58866150-58866169 Msa0338510:intron 30.0%
TGATACACATCATTGATGAA+TGG - chr2_4:58866226-58866245 Msa0338510:intron 30.0%
!!! TTTTTTGAGTTCAGCTATTG+AGG + chr2_4:58866291-58866310 None:intergenic 30.0%
AGATTCATAGTTACCTTATG+AGG + chr2_4:58866411-58866430 None:intergenic 30.0%
! GCTTATTTGAGTTTATCTAC+TGG - chr2_4:58866665-58866684 Msa0338510:CDS 30.0%
TACATACTTGTGACACTATT+TGG - chr2_4:58866690-58866709 Msa0338510:CDS 30.0%
! ATTTTCTGACCTGAAATTGT+TGG - chr2_4:58866789-58866808 Msa0338510:CDS 30.0%
AAATTTCGCCATATTTATCG+AGG - chr2_4:58866921-58866940 Msa0338510:CDS 30.0%
ACAGAAATATTGTGATTGGT+TGG - chr2_4:58866952-58866971 Msa0338510:CDS 30.0%
!! AACATGAAACATGCTTTTTG+CGG + chr2_4:58867363-58867382 None:intergenic 30.0%
! CTTTTAGCATACTTTTGGTA+AGG + chr2_4:58867529-58867548 None:intergenic 30.0%
! TGATGCTTTTAGCATACTTT+TGG + chr2_4:58867534-58867553 None:intergenic 30.0%
!! AAAAGTATGCTAAAAGCATC+AGG - chr2_4:58867533-58867552 Msa0338510:CDS 30.0%
! ATATCATTTTCATGTCTTGC+AGG - chr2_4:58867676-58867695 Msa0338510:intron 30.0%
TTGATTAAGCTCTCATCATT+TGG + chr2_4:58867927-58867946 None:intergenic 30.0%
TTAGGACACAATAAGTTTAG+TGG + chr2_4:58868178-58868197 None:intergenic 30.0%
CATACTAATCTTGCATCAAA+TGG - chr2_4:58868364-58868383 Msa0338510:intron 30.0%
TTGATCTAAACCTTAACTCT+TGG - chr2_4:58868521-58868540 Msa0338510:CDS 30.0%
TGATCTAAACCTTAACTCTT+GGG - chr2_4:58868522-58868541 Msa0338510:CDS 30.0%
! CAAAATTCCTCTTTTCCATA+TGG - chr2_4:58868628-58868647 Msa0338510:intron 30.0%
TATATCACCATATGGAAAAG+AGG + chr2_4:58868638-58868657 None:intergenic 30.0%
ACTTTGTGTATATCACCATA+TGG + chr2_4:58868646-58868665 None:intergenic 30.0%
TATGGTGATATACACAAAGT+TGG - chr2_4:58868646-58868665 Msa0338510:intron 30.0%
AACATTCTCTAGTTGGAAAT+TGG + chr2_4:58868704-58868723 None:intergenic 30.0%
AGAAATGAAGTTGGAATATC+AGG - chr2_4:58868760-58868779 Msa0338510:intron 30.0%
GTAAATCCTTGTAGACTATT+TGG - chr2_4:58868886-58868905 Msa0338510:intron 30.0%
GAAAATCCAAATAGTCTACA+AGG + chr2_4:58868895-58868914 None:intergenic 30.0%
TGACAGTGAAAATGACATTA+TGG - chr2_4:58869221-58869240 Msa0338510:intron 30.0%
GAAAATGACATTATGGTTGT+TGG - chr2_4:58869228-58869247 Msa0338510:intron 30.0%
AAATGACATTATGGTTGTTG+GGG - chr2_4:58869230-58869249 Msa0338510:intron 30.0%
TTTAGTAAAACTTACTGCCA+TGG + chr2_4:58869261-58869280 None:intergenic 30.0%
! AATGGTTTTCTAACTTACAC+TGG + chr2_4:58869460-58869479 None:intergenic 30.0%
AACTAGATTCTAACTACTGT+TGG + chr2_4:58869845-58869864 None:intergenic 30.0%
GATTATATTGCATAGAGACA+AGG + chr2_4:58869879-58869898 None:intergenic 30.0%
! GTCATTGGTTAATATAGTGT+CGG - chr2_4:58870150-58870169 Msa0338510:five_prime_UTR 30.0%
! TCATTGGTTAATATAGTGTC+GGG - chr2_4:58870151-58870170 Msa0338510:five_prime_UTR 30.0%
CTGGTTGTTATAATGAGTCT+CGG + chr2_4:58865397-58865416 None:intergenic 35.0%
TAAACTGCGAGAAAATTGTG+AGG - chr2_4:58865449-58865468 Msa0338510:intron 35.0%
AAACTGCGAGAAAATTGTGA+GGG - chr2_4:58865450-58865469 Msa0338510:intron 35.0%
!! TTTTGGTTGGTTCTTCTCTT+AGG + chr2_4:58865525-58865544 None:intergenic 35.0%
!!! CACCAACAATGTTTTTTGGT+TGG + chr2_4:58865538-58865557 None:intergenic 35.0%
ACTACAACATTCCCTTTCTT+TGG + chr2_4:58865768-58865787 None:intergenic 35.0%
! TTTGTCCCTCTTTTCTTCAT+TGG - chr2_4:58865824-58865843 Msa0338510:CDS 35.0%
ACAACCCTACAAAAGATTTG+TGG + chr2_4:58865873-58865892 None:intergenic 35.0%
TTTCCATTAACAGGCCAATA+AGG - chr2_4:58866012-58866031 Msa0338510:intron 35.0%
AACCTCATCATTCTCCTTAT+TGG + chr2_4:58866029-58866048 None:intergenic 35.0%
TCATAGTTACCTTATGAGGT+AGG + chr2_4:58866407-58866426 None:intergenic 35.0%
ATGTGAGAAGCTAACTTTGT+AGG + chr2_4:58866520-58866539 None:intergenic 35.0%
! TGAAGATTGTTTTCCTCCTT+TGG - chr2_4:58866609-58866628 Msa0338510:intron 35.0%
TAGTGTCATACTCATACCAA+AGG + chr2_4:58866628-58866647 None:intergenic 35.0%
TATGACACTATGAGTCTGTT+TGG - chr2_4:58866638-58866657 Msa0338510:CDS 35.0%
TCGAACTTTCCAACAATTTC+AGG + chr2_4:58866801-58866820 None:intergenic 35.0%
GAAATTGTTGGAAAGTTCGA+AGG - chr2_4:58866801-58866820 Msa0338510:CDS 35.0%
TTCACCTACCTCGATAAATA+TGG + chr2_4:58866932-58866951 None:intergenic 35.0%
TCCATGTTGTAATCTTTGTC+AGG - chr2_4:58867007-58867026 Msa0338510:CDS 35.0%
ACCTGACAAAGATTACAACA+TGG + chr2_4:58867011-58867030 None:intergenic 35.0%
! TGAACTGAGAGCTTTTGAAT+TGG - chr2_4:58867134-58867153 Msa0338510:CDS 35.0%
TGCTCATGGATCTCTATATA+GGG - chr2_4:58867211-58867230 Msa0338510:CDS 35.0%
TCTCTATATAGGGGTGAAAA+CGG - chr2_4:58867221-58867240 Msa0338510:CDS 35.0%
TGAAAACGGAGAGTTAAGAT+TGG - chr2_4:58867235-58867254 Msa0338510:CDS 35.0%
GAAAACGGAGAGTTAAGATT+GGG - chr2_4:58867236-58867255 Msa0338510:CDS 35.0%
! TGGTTACCAACAATTGATTC+AGG + chr2_4:58867296-58867315 None:intergenic 35.0%
! TTCATGTTTTCTACAGTCCA+AGG - chr2_4:58867375-58867394 Msa0338510:intron 35.0%
! CATTTTGAATCTTGTCCCTA+TGG + chr2_4:58867569-58867588 None:intergenic 35.0%
! GTGATTTGGATCCCTATAAA+TGG - chr2_4:58867727-58867746 Msa0338510:intron 35.0%
!! TTTGACTTGGGCCATTTATA+GGG + chr2_4:58867741-58867760 None:intergenic 35.0%
!!! TTTTGACTTGGGCCATTTAT+AGG + chr2_4:58867742-58867761 None:intergenic 35.0%
ATAAATGGCCCAAGTCAAAA+TGG - chr2_4:58867742-58867761 Msa0338510:intron 35.0%
!!! AAGCATCTCCATTTTGACTT+GGG + chr2_4:58867753-58867772 None:intergenic 35.0%
AGCTATCTGTGATATTACAC+AGG - chr2_4:58867951-58867970 Msa0338510:intron 35.0%
AAGATTGAATGTTCAAGGGA+GGG + chr2_4:58868053-58868072 None:intergenic 35.0%
CGACAAGATTGAATGTTCAA+GGG + chr2_4:58868057-58868076 None:intergenic 35.0%
TCGACAAGATTGAATGTTCA+AGG + chr2_4:58868058-58868077 None:intergenic 35.0%
TGAACATTCAATCTTGTCGA+AGG - chr2_4:58868058-58868077 Msa0338510:CDS 35.0%
TTGGATTCATACCAGTGATA+AGG + chr2_4:58868128-58868147 None:intergenic 35.0%
! TTCTAGTTATGCAGACTTCA+CGG - chr2_4:58868429-58868448 Msa0338510:intron 35.0%
AATATATCCATTGAGATCCC+TGG - chr2_4:58868489-58868508 Msa0338510:intron 35.0%
GATCTAAACCTTAACTCTTG+GGG - chr2_4:58868523-58868542 Msa0338510:CDS 35.0%
TAAGTTTGGTTGCATTATGC+AGG + chr2_4:58868579-58868598 None:intergenic 35.0%
! GATATACACAAAGTTGGTCA+AGG - chr2_4:58868652-58868671 Msa0338510:intron 35.0%
! TAGTTGGAAATTGGTTGGTT+TGG + chr2_4:58868695-58868714 None:intergenic 35.0%
TTCTCTAGTTGGAAATTGGT+TGG + chr2_4:58868700-58868719 None:intergenic 35.0%
TGACAAAAATTTCAACGCGA+AGG - chr2_4:58868864-58868883 Msa0338510:intron 35.0%
! ATTTGGATTTTCCTTATCGG+CGG - chr2_4:58868903-58868922 Msa0338510:intron 35.0%
! AGAGTTCTGTAGATTTTGTG+AGG + chr2_4:58868938-58868957 None:intergenic 35.0%
TGAATGAAGGTTCACAAACA+AGG - chr2_4:58869066-58869085 Msa0338510:CDS 35.0%
GAATGAAGGTTCACAAACAA+GGG - chr2_4:58869067-58869086 Msa0338510:CDS 35.0%
AGTGAACTAGAGAGACTATT+TGG - chr2_4:58869147-58869166 Msa0338510:intron 35.0%
GATTTAATGGCTGAAACAGA+TGG + chr2_4:58869320-58869339 None:intergenic 35.0%
!! TCCGTTTTTAATTGGTGTAC+CGG + chr2_4:58869392-58869411 None:intergenic 35.0%
!! AAGGTGCATCCGTTTTTAAT+TGG + chr2_4:58869400-58869419 None:intergenic 35.0%
TTCAATAGGACAACTCATTC+AGG + chr2_4:58869584-58869603 None:intergenic 35.0%
AAGTGGAGAAGATGACAATT+GGG - chr2_4:58869726-58869745 Msa0338510:CDS 35.0%
TGATGATAACCAGAGTTGTT+TGG - chr2_4:58869757-58869776 Msa0338510:CDS 35.0%
! ATCTTTTATAGCCACTGGAT+AGG - chr2_4:58870061-58870080 Msa0338510:five_prime_UTR 35.0%
! AATGACAGTTTGTTCTTTGG+CGG + chr2_4:58870136-58870155 None:intergenic 35.0%
! ACCAATGACAGTTTGTTCTT+TGG + chr2_4:58870139-58870158 None:intergenic 35.0%
! TTCGAGCAATGCTATTTAGT+GGG + chr2_4:58870199-58870218 None:intergenic 35.0%
! TTTCGAGCAATGCTATTTAG+TGG + chr2_4:58870200-58870219 None:intergenic 35.0%
AACTCACATACACAATTGTG+AGG - chr2_4:58870218-58870237 Msa0338510:five_prime_UTR 35.0%
!! CCTCGATATAAGAGTGTCAA+AGG + chr2_4:58865364-58865383 None:intergenic 40.0%
CCTTTGACACTCTTATATCG+AGG - chr2_4:58865361-58865380 Msa0338510:three_prime_UTR 40.0%
GAACTAGAAGATGAACATGC+TGG + chr2_4:58865675-58865694 None:intergenic 40.0%
TGAAGATACAAGAGCTGAAG+TGG + chr2_4:58865697-58865716 None:intergenic 40.0%
ACTTGTTCCAAATGACCTTG+TGG + chr2_4:58865798-58865817 None:intergenic 40.0%
TGTGGTTGAAGACCATATGT+TGG + chr2_4:58865855-58865874 None:intergenic 40.0%
! TCTCCTTATTGGCCTGTTAA+TGG + chr2_4:58866018-58866037 None:intergenic 40.0%
GAATGATGAGGTTTACACAC+AGG - chr2_4:58866036-58866055 Msa0338510:intron 40.0%
ATAAAACAAACCTCTGCCTG+TGG + chr2_4:58866073-58866092 None:intergenic 40.0%
!!! ACAGGCAGAGGTTTGTTTTA+TGG - chr2_4:58866072-58866091 Msa0338510:intron 40.0%
TCCTTTGTCGAATTTCTCCT+TGG - chr2_4:58866334-58866353 Msa0338510:intron 40.0%
CCTTTGTCGAATTTCTCCTT+GGG - chr2_4:58866335-58866354 Msa0338510:intron 40.0%
ACACTAGTATTTGGATCCCA+AGG + chr2_4:58866354-58866373 None:intergenic 40.0%
TTCTTTGCTCCTACCTCATA+AGG - chr2_4:58866395-58866414 Msa0338510:CDS 40.0%
TTGTGTTGCATTCAGTTAGC+AGG - chr2_4:58866430-58866449 Msa0338510:CDS 40.0%
TGTGTTGCATTCAGTTAGCA+GGG - chr2_4:58866431-58866450 Msa0338510:CDS 40.0%
TGTCATACTCATACCAAAGG+AGG + chr2_4:58866625-58866644 None:intergenic 40.0%
CACTATGAGTCTGTTTGGAT+TGG - chr2_4:58866643-58866662 Msa0338510:CDS 40.0%
ATTGTTGGAAAGTTCGAAGG+TGG - chr2_4:58866804-58866823 Msa0338510:CDS 40.0%
TTTGCAACAAGCTCTTGAGA+GGG + chr2_4:58866879-58866898 None:intergenic 40.0%
! TTTTGCAACAAGCTCTTGAG+AGG + chr2_4:58866880-58866899 None:intergenic 40.0%
TTCGCCATATTTATCGAGGT+AGG - chr2_4:58866925-58866944 Msa0338510:CDS 40.0%
! AGCCAGAAGAATCTTGTTTC+TGG - chr2_4:58867076-58867095 Msa0338510:CDS 40.0%
! GCCAGAAGAATCTTGTTTCT+GGG - chr2_4:58867077-58867096 Msa0338510:CDS 40.0%
!! CCAGAAGAATCTTGTTTCTG+GGG - chr2_4:58867078-58867097 Msa0338510:CDS 40.0%
ATAGAGATCCATGAGCAGTA+AGG + chr2_4:58867208-58867227 None:intergenic 40.0%
CTGCTCATGGATCTCTATAT+AGG - chr2_4:58867210-58867229 Msa0338510:CDS 40.0%
GCTCATGGATCTCTATATAG+GGG - chr2_4:58867212-58867231 Msa0338510:CDS 40.0%
GGTCTTCCTGAATCAATTGT+TGG - chr2_4:58867287-58867306 Msa0338510:CDS 40.0%
TCCTAGTTTCCTTTCTTCAG+TGG - chr2_4:58867325-58867344 Msa0338510:CDS 40.0%
TAGCATTAGCCACTGAAGAA+AGG + chr2_4:58867337-58867356 None:intergenic 40.0%
! AGTCCAAGGTACTTGATTAG+CGG - chr2_4:58867389-58867408 Msa0338510:intron 40.0%
TATCCGCTAATCAAGTACCT+TGG + chr2_4:58867395-58867414 None:intergenic 40.0%
TTGGTAAGGCACAACGAAAT+CGG + chr2_4:58867515-58867534 None:intergenic 40.0%
TGGATGAATCTCCAGAAAGA+AGG - chr2_4:58867599-58867618 Msa0338510:CDS 40.0%
GTTATAGCTGACCTTCTTTC+TGG + chr2_4:58867613-58867632 None:intergenic 40.0%
AGTGACTGGAATGAGTGATT+TGG - chr2_4:58867713-58867732 Msa0338510:intron 40.0%
!!! CAAGCATCTCCATTTTGACT+TGG + chr2_4:58867754-58867773 None:intergenic 40.0%
GTCAAAATGGAGATGCTTGA+TGG - chr2_4:58867755-58867774 Msa0338510:intron 40.0%
TGATATTACACAGGTCCGAT+GGG - chr2_4:58867960-58867979 Msa0338510:intron 40.0%
ATCAAGATAGAGTCTCTCCT+TGG - chr2_4:58868004-58868023 Msa0338510:CDS 40.0%
TCAAGATAGAGTCTCTCCTT+GGG - chr2_4:58868005-58868024 Msa0338510:CDS 40.0%
CAAGATTGAATGTTCAAGGG+AGG + chr2_4:58868054-58868073 None:intergenic 40.0%
ATACCAGTGATAAGGTGACT+GGG + chr2_4:58868120-58868139 None:intergenic 40.0%
TGAGTCTATAAGATCGACCA+AGG - chr2_4:58868246-58868265 Msa0338510:CDS 40.0%
TTACTTCTTCCGAGTTTACG+AGG - chr2_4:58868398-58868417 Msa0338510:intron 40.0%
TACTTCTTCCGAGTTTACGA+GGG - chr2_4:58868399-58868418 Msa0338510:intron 40.0%
GTGAAGTCTGCATAACTAGA+AGG + chr2_4:58868430-58868449 None:intergenic 40.0%
!! TGGTTTTACCCCAAGAGTTA+AGG + chr2_4:58868534-58868553 None:intergenic 40.0%
AATACTCCTTCAGCTCAGAT+AGG - chr2_4:58868730-58868749 Msa0338510:CDS 40.0%
GGTGCATTGAGAAATGAAGT+TGG - chr2_4:58868751-58868770 Msa0338510:intron 40.0%
! GTTCTGTAGATTTTGTGAGG+TGG + chr2_4:58868935-58868954 None:intergenic 40.0%
TGCTAAAAGAAGTTGCACGA+AGG - chr2_4:58868957-58868976 Msa0338510:intron 40.0%
! ATGCGTTGGCAAATTGTCAA+AGG + chr2_4:58869033-58869052 None:intergenic 40.0%
GCTCAATCTTGAGAGATCAA+TGG + chr2_4:58869109-58869128 None:intergenic 40.0%
ATTGAGCAGCTACAATGATC+TGG - chr2_4:58869122-58869141 Msa0338510:CDS 40.0%
ACTAGAGAGACTATTTGGCA+TGG - chr2_4:58869152-58869171 Msa0338510:intron 40.0%
! CTTCTAAGAGATCCTGACAA+AGG - chr2_4:58869180-58869199 Msa0338510:intron 40.0%
TAAGAGATCCTGACAAAGGA+TGG - chr2_4:58869184-58869203 Msa0338510:intron 40.0%
! CATTTTCACTGTCAGTGTAG+AGG + chr2_4:58869215-58869234 None:intergenic 40.0%
!! CCGTTTTTAATTGGTGTACC+GGG + chr2_4:58869391-58869410 None:intergenic 40.0%
CCCGGTACACCAATTAAAAA+CGG - chr2_4:58869388-58869407 Msa0338510:intron 40.0%
GAAGTGGAGAAGATGACAAT+TGG - chr2_4:58869725-58869744 Msa0338510:CDS 40.0%
GTGTATGTTCCAAACAACTC+TGG + chr2_4:58869769-58869788 None:intergenic 40.0%
! GGAACATACACCATTGATTG+TGG - chr2_4:58869778-58869797 Msa0338510:CDS 40.0%
! ACATACACCATTGATTGTGG+AGG - chr2_4:58869781-58869800 Msa0338510:CDS 40.0%
! TTTGAAGCCTCCACAATCAA+TGG + chr2_4:58869791-58869810 None:intergenic 40.0%
ACTACTGTTGGAGAAGAATC+TGG + chr2_4:58869833-58869852 None:intergenic 40.0%
TATAGACAAAGTCGCATGCA+TGG - chr2_4:58869981-58870000 Msa0338510:CDS 40.0%
! AGCGAATCTTTTATAGCCAC+TGG - chr2_4:58870056-58870075 Msa0338510:five_prime_UTR 40.0%
GGAGGTAGTTGCTGAAAAAA+TGG + chr2_4:58870106-58870125 None:intergenic 40.0%
TTGTTCTTTGGCGGAATACA+AGG + chr2_4:58870127-58870146 None:intergenic 40.0%
GCCAAAGAACAAACTGTCAT+TGG - chr2_4:58870135-58870154 Msa0338510:five_prime_UTR 40.0%
GGCCAATAAGGAGAATGATG+AGG - chr2_4:58866024-58866043 Msa0338510:intron 45.0%
! ACAGGTTACTTTGCTTCCAC+AGG - chr2_4:58866054-58866073 Msa0338510:intron 45.0%
CCCAAGGAGAAATTCGACAA+AGG + chr2_4:58866338-58866357 None:intergenic 45.0%
TCAGTTAGCAGGGATGTGTT+TGG - chr2_4:58866441-58866460 Msa0338510:CDS 45.0%
TTGGATGACAAAGAGCCTGA+AGG - chr2_4:58866460-58866479 Msa0338510:CDS 45.0%
CTTGTTGCAAAAGACCTGCA+TGG - chr2_4:58866888-58866907 Msa0338510:CDS 45.0%
AATCTTTGTCAGGTCAGCCA+AGG - chr2_4:58867017-58867036 Msa0338510:CDS 45.0%
CCCCAGAAACAAGATTCTTC+TGG + chr2_4:58867081-58867100 None:intergenic 45.0%
GATTCAGGAAGACCGTTTCT+CGG + chr2_4:58867281-58867300 None:intergenic 45.0%
GGAAACTAGGAGAACAACTC+TGG + chr2_4:58867316-58867335 None:intergenic 45.0%
GCCACTGAAGAAAGGAAACT+AGG + chr2_4:58867329-58867348 None:intergenic 45.0%
ATCTTGTCCCTATGGTCAGT+GGG + chr2_4:58867561-58867580 None:intergenic 45.0%
AATCTTGTCCCTATGGTCAG+TGG + chr2_4:58867562-58867581 None:intergenic 45.0%
ATGTCTTGCAGGTGTAGTAG+CGG - chr2_4:58867687-58867706 Msa0338510:intron 45.0%
TGTAGTAGCGGTATAGTGAC+TGG - chr2_4:58867699-58867718 Msa0338510:intron 45.0%
! TAGAAAGGCGTACGCTTCAA+CGG + chr2_4:58867880-58867899 None:intergenic 45.0%
GTGATATTACACAGGTCCGA+TGG - chr2_4:58867959-58867978 Msa0338510:intron 45.0%
CCTCAATATCCTCATCCCAT+CGG + chr2_4:58867978-58867997 None:intergenic 45.0%
CATACCAGTGATAAGGTGAC+TGG + chr2_4:58868121-58868140 None:intergenic 45.0%
TTCTTGACCTTGCAAGACCT+TGG + chr2_4:58868266-58868285 None:intergenic 45.0%
TAGATCAACCTTTCCTGCCA+GGG + chr2_4:58868509-58868528 None:intergenic 45.0%
TTAGATCAACCTTTCCTGCC+AGG + chr2_4:58868510-58868529 None:intergenic 45.0%
AATGCACCTATCTGAGCTGA+AGG + chr2_4:58868739-58868758 None:intergenic 45.0%
! ATTTCTGCTGCTGCTTCTCT+AGG - chr2_4:58868820-58868839 Msa0338510:intron 45.0%
CTTCTCTAGGTGCAAACTTG+AGG - chr2_4:58868833-58868852 Msa0338510:intron 45.0%
CACAAACAAGGGAGCTTAGT+TGG - chr2_4:58869078-58869097 Msa0338510:CDS 45.0%
GAGAGACTATTTGGCATGGA+AGG - chr2_4:58869156-58869175 Msa0338510:intron 45.0%
AGGATTCTCCATCCTTTGTC+AGG + chr2_4:58869195-58869214 None:intergenic 45.0%
GGCTATGACTTATGTTGTCC+CGG - chr2_4:58869370-58869389 Msa0338510:intron 45.0%
ACAGCAGACAATCGAAGTCA+AGG + chr2_4:58869419-58869438 None:intergenic 45.0%
GTTCATCCAGAATGAGTCGT+CGG - chr2_4:58869496-58869515 Msa0338510:intron 45.0%
GTCGTCGGATCATCATTCAA+TGG - chr2_4:58869511-58869530 Msa0338510:intron 45.0%
AGAACTCACTGCAGGCAAAA+GGG + chr2_4:58869667-58869686 None:intergenic 45.0%
CATAACACAGAACTCACTGC+AGG + chr2_4:58869675-58869694 None:intergenic 45.0%
CTGCAGTGAGTTCTGTGTTA+TGG - chr2_4:58869673-58869692 Msa0338510:intron 45.0%
GCTTCAAAGTCTTCCTCAGT+GGG - chr2_4:58869803-58869822 Msa0338510:CDS 45.0%
TTTATAGCCACTGGATAGGC+AGG - chr2_4:58870065-58870084 Msa0338510:five_prime_UTR 45.0%
AAACAATCCTGCCTATCCAG+TGG + chr2_4:58870075-58870094 None:intergenic 45.0%
TTCTTTGGCGGAATACAAGG+AGG + chr2_4:58870124-58870143 None:intergenic 45.0%
GAACTATGGCATGCTTGTGC+TGG - chr2_4:58865726-58865745 Msa0338510:three_prime_UTR 50.0%
TACTTTGCTTCCACAGGCAG+AGG - chr2_4:58866060-58866079 Msa0338510:intron 50.0%
GAGCCTGAAGGTTTAGAAGC+AGG - chr2_4:58866472-58866491 Msa0338510:CDS 50.0%
CCACCTGCTTCTAAACCTTC+AGG + chr2_4:58866478-58866497 None:intergenic 50.0%
CCTGAAGGTTTAGAAGCAGG+TGG - chr2_4:58866475-58866494 Msa0338510:CDS 50.0%
AGGTTTAGAAGCAGGTGGAG+AGG - chr2_4:58866480-58866499 Msa0338510:CDS 50.0%
GGTTTAGAAGCAGGTGGAGA+GGG - chr2_4:58866481-58866500 Msa0338510:CDS 50.0%
!! TCCATGAGTGCTGGTATCAG+AGG + chr2_4:58866563-58866582 None:intergenic 50.0%
TCTGATACCAGCACTCATGG+AGG - chr2_4:58866562-58866581 Msa0338510:intron 50.0%
CTGATACCAGCACTCATGGA+GGG - chr2_4:58866563-58866582 Msa0338510:intron 50.0%
AGAAAACCCTCCATGAGTGC+TGG + chr2_4:58866572-58866591 None:intergenic 50.0%
TGCAAAAGACCTGCATGGTG+TGG - chr2_4:58866893-58866912 Msa0338510:CDS 50.0%
ATTTCCACTCCACACCATGC+AGG + chr2_4:58866905-58866924 None:intergenic 50.0%
TGAGCAGTAAGGTACACTGC+AGG + chr2_4:58867197-58867216 None:intergenic 50.0%
GCAGTGTACCTTACTGCTCA+TGG - chr2_4:58867197-58867216 Msa0338510:CDS 50.0%
ATCAGGAACCCACTGACCAT+AGG - chr2_4:58867550-58867569 Msa0338510:CDS 50.0%
TCAGGAACCCACTGACCATA+GGG - chr2_4:58867551-58867570 Msa0338510:CDS 50.0%
CCGATGGGATGAGGATATTG+AGG - chr2_4:58867975-58867994 Msa0338510:intron 50.0%
AAGGGAGGGAGAGAAGTAGA+CGG + chr2_4:58868039-58868058 None:intergenic 50.0%
GTCGAAGGCTGAAGAAACTG+CGG - chr2_4:58868073-58868092 Msa0338510:CDS 50.0%
AAGGCTGAAGAAACTGCGGA+CGG - chr2_4:58868077-58868096 Msa0338510:CDS 50.0%
TCACCCAGTCACCTTATCAC+TGG - chr2_4:58868114-58868133 Msa0338510:intron 50.0%
GCGATGAAGATGGGGTGATT+AGG + chr2_4:58868196-58868215 None:intergenic 50.0%
TCTCCAGCTGCGATGAAGAT+GGG + chr2_4:58868205-58868224 None:intergenic 50.0%
! AGCTGGAGACAGTGGGTTTA+TGG - chr2_4:58868216-58868235 Msa0338510:CDS 50.0%
AGATCGACCAAGGTCTTGCA+AGG - chr2_4:58868256-58868275 Msa0338510:CDS 50.0%
AGGCTGAACCCTCGTAAACT+CGG + chr2_4:58868410-58868429 None:intergenic 50.0%
CAGACTTCACGGAAACGAAC+CGG - chr2_4:58868440-58868459 Msa0338510:intron 50.0%
! GGAAACGAACCGGTTTCCTA+GGG - chr2_4:58868450-58868469 Msa0338510:intron 50.0%
CTTGCAAGACCCTAGGAAAC+CGG + chr2_4:58868462-58868481 None:intergenic 50.0%
TCTTGACCTTGCAAGACCCT+AGG + chr2_4:58868469-58868488 None:intergenic 50.0%
TATCCATTGAGATCCCTGGC+AGG - chr2_4:58868493-58868512 Msa0338510:CDS 50.0%
TTTCCTGCCAGGGATCTCAA+TGG + chr2_4:58868499-58868518 None:intergenic 50.0%
ATTGAGATCCCTGGCAGGAA+AGG - chr2_4:58868498-58868517 Msa0338510:CDS 50.0%
CCTGCAGCTTCTGCTTGTTT+CGG + chr2_4:58868795-58868814 None:intergenic 50.0%
! TGGATTTTCCTTATCGGCGG+CGG - chr2_4:58868906-58868925 Msa0338510:intron 50.0%
TGGTTGTTGGGGATGATCCA+TGG - chr2_4:58869241-58869260 Msa0338510:intron 50.0%
GATGATCCGACGACTCATTC+TGG + chr2_4:58869505-58869524 None:intergenic 50.0%
CAGAACTCACTGCAGGCAAA+AGG + chr2_4:58869668-58869687 None:intergenic 50.0%
GGCTTCAAAGTCTTCCTCAG+TGG - chr2_4:58869802-58869821 Msa0338510:CDS 50.0%
GCATGCATGGCTGAAACTCA+CGG - chr2_4:58869994-58870013 Msa0338510:CDS 50.0%
GCCTCTGATACCAGCACTCA+TGG - chr2_4:58866559-58866578 Msa0338510:intron 55.0%
CAATCTTCAGCAGCTCGACG+AGG + chr2_4:58866598-58866617 None:intergenic 55.0%
AAGACCTGCATGGTGTGGAG+TGG - chr2_4:58866898-58866917 Msa0338510:CDS 55.0%
CTTTGTCAGGTCAGCCAAGG+AGG - chr2_4:58867020-58867039 Msa0338510:CDS 55.0%
GTAGTGAGCAGATGCCTCCT+TGG + chr2_4:58867037-58867056 None:intergenic 55.0%
!! AGGAGGCATCTGCTCACTAC+TGG - chr2_4:58867037-58867056 Msa0338510:CDS 55.0%
GGGACGCAGTGCTCTTTCTA+AGG - chr2_4:58867098-58867117 Msa0338510:CDS 55.0%
AGAGCTGCTCGACCGAGAAA+CGG - chr2_4:58867266-58867285 Msa0338510:CDS 55.0%
GTACGCTTCAACGGCACAGT+TGG + chr2_4:58867871-58867890 None:intergenic 55.0%
TACACAGGTCCGATGGGATG+AGG - chr2_4:58867966-58867985 Msa0338510:intron 55.0%
GTAGACGGATCGATCTCCCA+AGG + chr2_4:58868024-58868043 None:intergenic 55.0%
AGGCTGAAGAAACTGCGGAC+GGG - chr2_4:58868078-58868097 Msa0338510:CDS 55.0%
CTCCAGCTGCGATGAAGATG+GGG + chr2_4:58868204-58868223 None:intergenic 55.0%
GTCTCCAGCTGCGATGAAGA+TGG + chr2_4:58868206-58868225 None:intergenic 55.0%
TTCATCGCAGCTGGAGACAG+TGG - chr2_4:58868208-58868227 Msa0338510:intron 55.0%
TCATCGCAGCTGGAGACAGT+GGG - chr2_4:58868209-58868228 Msa0338510:intron 55.0%
! CGGAAACGAACCGGTTTCCT+AGG - chr2_4:58868449-58868468 Msa0338510:intron 55.0%
CGGTTTCCTAGGGTCTTGCA+AGG - chr2_4:58868460-58868479 Msa0338510:intron 55.0%
CCGAAACAAGCAGAAGCTGC+AGG - chr2_4:58868792-58868811 Msa0338510:intron 55.0%
AGAATCTGGCTGTCCCACTG+AGG + chr2_4:58869819-58869838 None:intergenic 55.0%
GAAGCAGGTGGAGAGGGAGA+TGG - chr2_4:58866487-58866506 Msa0338510:CDS 60.0%
GGCATCTGCTCACTACTGGC+TGG - chr2_4:58867041-58867060 Msa0338510:CDS 60.0%
CACCCCATCTTCATCGCAGC+TGG - chr2_4:58868199-58868218 Msa0338510:intron 60.0%
GGTGGTTTCCGCCGCCGATA+AGG + chr2_4:58868917-58868936 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 58865322 58870288 58865322 ID=Msa0338510;Name=Msa0338510
chr2_4 mRNA 58865322 58870288 58865322 ID=Msa0338510-mRNA-1;Parent=Msa0338510;Name=Msa0338510-mRNA-1;_AED=0.16;_eAED=0.16;_QI=239|1|1|1|0.91|0.84|13|214|809
chr2_4 exon 58865322 58865383 58865322 ID=Msa0338510-mRNA-1:exon:18201;Parent=Msa0338510-mRNA-1
chr2_4 exon 58865596 58865931 58865596 ID=Msa0338510-mRNA-1:exon:18200;Parent=Msa0338510-mRNA-1
chr2_4 exon 58866345 58866535 58866345 ID=Msa0338510-mRNA-1:exon:18199;Parent=Msa0338510-mRNA-1
chr2_4 exon 58866632 58867392 58866632 ID=Msa0338510-mRNA-1:exon:18198;Parent=Msa0338510-mRNA-1
chr2_4 exon 58867475 58867637 58867475 ID=Msa0338510-mRNA-1:exon:18197;Parent=Msa0338510-mRNA-1
chr2_4 exon 58867834 58867912 58867834 ID=Msa0338510-mRNA-1:exon:18196;Parent=Msa0338510-mRNA-1
chr2_4 exon 58867990 58868109 58867990 ID=Msa0338510-mRNA-1:exon:18195;Parent=Msa0338510-mRNA-1
chr2_4 exon 58868214 58868378 58868214 ID=Msa0338510-mRNA-1:exon:18194;Parent=Msa0338510-mRNA-1
chr2_4 exon 58868491 58868581 58868491 ID=Msa0338510-mRNA-1:exon:18193;Parent=Msa0338510-mRNA-1
chr2_4 exon 58868668 58868752 58868668 ID=Msa0338510-mRNA-1:exon:18192;Parent=Msa0338510-mRNA-1
chr2_4 exon 58868980 58869165 58868980 ID=Msa0338510-mRNA-1:exon:18191;Parent=Msa0338510-mRNA-1
chr2_4 exon 58869529 58869585 58869529 ID=Msa0338510-mRNA-1:exon:18190;Parent=Msa0338510-mRNA-1
chr2_4 exon 58869702 58870288 58869702 ID=Msa0338510-mRNA-1:exon:18189;Parent=Msa0338510-mRNA-1
chr2_4 five_prime_UTR 58870050 58870288 58870050 ID=Msa0338510-mRNA-1:five_prime_utr;Parent=Msa0338510-mRNA-1
chr2_4 CDS 58869702 58870049 58869702 ID=Msa0338510-mRNA-1:cds;Parent=Msa0338510-mRNA-1
chr2_4 CDS 58869529 58869585 58869529 ID=Msa0338510-mRNA-1:cds;Parent=Msa0338510-mRNA-1
chr2_4 CDS 58868980 58869165 58868980 ID=Msa0338510-mRNA-1:cds;Parent=Msa0338510-mRNA-1
chr2_4 CDS 58868668 58868752 58868668 ID=Msa0338510-mRNA-1:cds;Parent=Msa0338510-mRNA-1
chr2_4 CDS 58868491 58868581 58868491 ID=Msa0338510-mRNA-1:cds;Parent=Msa0338510-mRNA-1
chr2_4 CDS 58868214 58868378 58868214 ID=Msa0338510-mRNA-1:cds;Parent=Msa0338510-mRNA-1
chr2_4 CDS 58867990 58868109 58867990 ID=Msa0338510-mRNA-1:cds;Parent=Msa0338510-mRNA-1
chr2_4 CDS 58867834 58867912 58867834 ID=Msa0338510-mRNA-1:cds;Parent=Msa0338510-mRNA-1
chr2_4 CDS 58867475 58867637 58867475 ID=Msa0338510-mRNA-1:cds;Parent=Msa0338510-mRNA-1
chr2_4 CDS 58866632 58867392 58866632 ID=Msa0338510-mRNA-1:cds;Parent=Msa0338510-mRNA-1
chr2_4 CDS 58866345 58866535 58866345 ID=Msa0338510-mRNA-1:cds;Parent=Msa0338510-mRNA-1
chr2_4 CDS 58865748 58865931 58865748 ID=Msa0338510-mRNA-1:cds;Parent=Msa0338510-mRNA-1
chr2_4 three_prime_UTR 58865596 58865747 58865596 ID=Msa0338510-mRNA-1:three_prime_utr;Parent=Msa0338510-mRNA-1
chr2_4 three_prime_UTR 58865322 58865383 58865322 ID=Msa0338510-mRNA-1:three_prime_utr;Parent=Msa0338510-mRNA-1
Gene Sequence

>Msa0338510

ATGGATATTGATCTGAATGATTCCACAACTCAAGTTAAGAAGAATACATGTTGCAATGGTGAATGTGAGAAAAGTGTTTGTTGTGTTTGCACTTTATCTTCTTCTTCATCACCAGCATGTTCATCTTCTAGTTCCACTTCAGCTCTTGTATCTTCATCTTATCTTGAACTATGGCATGCTTGTGCTGGACCTTTAACATCACTTCCAAAGAAAGGGAATGTTGTAGTTTATTTTCCACAAGGTCATTTGGAACAAGTTGCATCTTTGTCCCTCTTTTCTTCATTGGAAATTCCAACATATGGTCTTCAACCACAAATCTTTTGTAGGGTTGTCAATGTTCAACTACTTGCCAATAAGGAGAATGATGAGGTTTACACACAGGTTACTTTGCTTCCACAGGCAGAGTTAGCAGGGATGTGTTTGGATGACAAAGAGCCTGAAGGTTTAGAAGCAGGTGGAGAGGGAGATGGAAGATCGCCTACAAAGTTAGCTTCTCACATGTTTTGCAAAACACTCACTGCCTCTGATACCAGCACTCATGGAGGGTTTTCTGTTCCTCGTCGAGCTGCTGAAGATTGTTTTCCTCCTTTGGATTATAAGCAGCAGAGACCCTCTCAAGAGCTTGTTGCAAAAGACCTGCATGGTGTGGAGTGGAAATTTCGCCATATTTATCGAGGTCAGCCAAGGAGGCATCTGCTCACTACTGGCTGGAGTACTTTTGTTAGCCAGAAGAATCTTGTTTCTGGGGACGCAGTGCTCTTTCTAAGGGGTGAAAACGGAGAGTTAAGATTGGGAATCAGAAGAGCTGCTCGACCGAGAAACGGTCTTCCTGAATCAATTGTTGGTAACCAGAGTTGTTCTCCTAGTTTCCTTTCTTCAGTGGCTAATGCTATCTCCGCAAAAAGCATGTTTCATGTTTTCTACAGTCCAAGAGCTAGTCATGCCGATTTCGTTGTGCCTTACCAAAAGTATGCTAAAAGCATCAGGAACCCACTGACCATAGGGACAAGATTCAAAATGAAATTTGAAATGGATGAATCTCCAGAAAGAAGGTGTAGTAGCGGTATAGTGACTGGAATGAGTGATTTGGATCCCTATAAATGGCCCAAGTCAAAATGGAGATGCTTGATGGTCCGATGGGATGAGGATATTGAGGCTAATCATCAAGATAGAGTCTCTCCTTGGGAGATCGATCCGTCTACTTCTCTCCCTCCCTTGAACATTCAATCTTGTCGAAGGCTGAAGAAACTGCGGACGGGTCTGCAAGTTGAATCACCCAGTCACCTTATCACTGCTGGAGACAGTGGGTTTATGGACTTTGATGAGTCTATAAGATCGACCAAGGTCTTGCAAGGTCAAGAAAAAACAAGTTTTATGTCACTATATTATGGATGTGACACAGTAACTAAGCAGAAAGAATTTGATATCAATTCTCTAAGACATACTAATCTTGCATCAAATGGAGCAAGAAAGATTACTTCTTCCGAGTTTACGAGGGTTCAGCCTTCTAGTTATGCAGACTTCACGGAAACGAACCGGTTTCCTAGGGTCTTGCAAGGTCAAGAAATATATCCATTGAGATCCCTGGCAGGAAAGGTTGATCTAAACCTTAACTCTTGGGGTAAAACCAATGTTAGTTACACAAATTATAACCTGCATAATGCAACCAAACTTAAATTTCACTCATTAGGATCAGAAGTTCTTCAAAATTCCTCTTTTCCATATGGTGATATACACAAAGTTGGTCAAGGTAGCAGCATGCTGTGCTCCAAACCAACCAATTTCCAACTAGAGAATGTTTCATTTAATACTCCTTCAGCTCAGATAGGTGCATTGAGAAATGAAGTTGGAATATCAGGTTTCACAATCCGAAACAAGCAGAAGCTGCAGGACAATATTTCTGCTGCTGCTTCTCTAGGTGCAAACTTGAGGATTTCAAATGACAAAAATTTCAACGCGAAGGTAAATCCTTGTAGACTATTTGGATTTTCCTTATCGGCGGCGGAAACCACCTCACAAAATCTACAGAACTCTGCTAAAAGAAGTTGCACGAAGGTTCACAAACAAGGGAGCTTAGTTGGAAGAGCCATTGATCTCTCAAGATTGAGCAGCTACAATGATCTGGTGAGTGAACTAGAGAGACTATTTGGCATGGAAGGTCTTCTAAGAGATCCTGACAAAGGATGGAGAATCCTCTACACTGACAGTGAAAATGACATTATGGTTGTTGGGGATGATCCATGGCATGAGTTCTGTGTTATGGTATCAAAAATCCATATATATACACAAGAAGAAGTGGAGAAGATGACAATTGGGATGATGAATGATGATAACCAGAGTTGTTTGGAACATACACCATTGATTGTGGAGGCTTCAAAGTCTTCCTCAGTGGGACAGCCAGATTCTTCTCCAACAGTAGTTAGAATCTAG
Protein sequence

>Msa0338510

MDIDLNDSTTQVKKNTCCNGECEKSVCCVCTLSSSSSPACSSSSSTSALVSSSYLELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASLSLFSSLEIPTYGLQPQIFCRVVNVQLLANKENDEVYTQVTLLPQAELAGMCLDDKEPEGLEAGGEGDGRSPTKLASHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWKFRHIYRGQPRRHLLTTGWSTFVSQKNLVSGDAVLFLRGENGELRLGIRRAARPRNGLPESIVGNQSCSPSFLSSVANAISAKSMFHVFYSPRASHADFVVPYQKYAKSIRNPLTIGTRFKMKFEMDESPERRCSSGIVTGMSDLDPYKWPKSKWRCLMVRWDEDIEANHQDRVSPWEIDPSTSLPPLNIQSCRRLKKLRTGLQVESPSHLITAGDSGFMDFDESIRSTKVLQGQEKTSFMSLYYGCDTVTKQKEFDINSLRHTNLASNGARKITSSEFTRVQPSSYADFTETNRFPRVLQGQEIYPLRSLAGKVDLNLNSWGKTNVSYTNYNLHNATKLKFHSLGSEVLQNSSFPYGDIHKVGQGSSMLCSKPTNFQLENVSFNTPSAQIGALRNEVGISGFTIRNKQKLQDNISAAASLGANLRISNDKNFNAKVNPCRLFGFSLSAAETTSQNLQNSAKRSCTKVHKQGSLVGRAIDLSRLSSYNDLVSELERLFGMEGLLRDPDKGWRILYTDSENDIMVVGDDPWHEFCVMVSKIHIYTQEEVEKMTIGMMNDDNQSCLEHTPLIVEASKSSSVGQPDSSPTVVRI*