Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0243910 | XP_013463390.2 | 86.076 | 158 | 21 | 1 | 15 | 171 | 26 | 183 | 1.80e-84 | 282 |
| Msa0243910 | XP_013463390.2 | 98.361 | 305 | 5 | 0 | 180 | 484 | 280 | 584 | 0.0 | 611 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0243910 | sp|Q9C7A2|ITN1_ARATH | 22.400 | 500 | 284 | 15 | 26 | 447 | 62 | 535 | 2.24e-18 | 91.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0243910 | A0A396J5U6 | 86.076 | 158 | 21 | 1 | 15 | 171 | 26 | 183 | 8.61e-85 | 282 |
| Msa0243910 | A0A396J5U6 | 98.361 | 305 | 5 | 0 | 180 | 484 | 280 | 584 | 0.0 | 611 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012520 | Msa0243910 | 0.856209 | 3.755554e-62 | -8.615850e-47 |
| Msa0029020 | Msa0243910 | -0.813556 | 2.410988e-51 | -8.615850e-47 |
| Msa0035110 | Msa0243910 | 0.803262 | 3.791998e-49 | -8.615850e-47 |
| Msa0041000 | Msa0243910 | 0.811628 | 6.367030e-51 | -8.615850e-47 |
| Msa0046820 | Msa0243910 | 0.809444 | 1.886903e-50 | -8.615850e-47 |
| Msa0088550 | Msa0243910 | 0.819942 | 8.909121e-53 | -8.615850e-47 |
| Msa0124110 | Msa0243910 | 0.830184 | 3.387875e-55 | -8.615850e-47 |
| Msa0135360 | Msa0243910 | 0.816254 | 6.079618e-52 | -8.615850e-47 |
| Msa0135630 | Msa0243910 | 0.807363 | 5.243551e-50 | -8.615850e-47 |
| Msa0142240 | Msa0243910 | 0.847034 | 1.492832e-59 | -8.615850e-47 |
| Msa0152420 | Msa0243910 | 0.858003 | 1.109704e-62 | -8.615850e-47 |
| Msa0153440 | Msa0243910 | 0.804754 | 1.855490e-49 | -8.615850e-47 |
| Msa0165430 | Msa0243910 | 0.805967 | 1.033436e-49 | -8.615850e-47 |
| Msa0179720 | Msa0243910 | 0.812032 | 5.198452e-51 | -8.615850e-47 |
| Msa0179860 | Msa0243910 | 0.804327 | 2.277870e-49 | -8.615850e-47 |
| Msa0201330 | Msa0243910 | 0.956729 | 1.481493e-114 | -8.615850e-47 |
| Msa0201370 | Msa0243910 | 0.936364 | 1.954256e-97 | -8.615850e-47 |
| Msa0201390 | Msa0243910 | 0.850457 | 1.677469e-60 | -8.615850e-47 |
| Msa0208390 | Msa0243910 | 0.811144 | 8.107008e-51 | -8.615850e-47 |
| Msa0226250 | Msa0243910 | 0.804234 | 2.382374e-49 | -8.615850e-47 |
| Msa0243910 | Msa0243930 | 0.950462 | 1.567504e-108 | -8.615850e-47 |
| Msa0243910 | Msa0243940 | 0.864146 | 1.500284e-64 | -8.615850e-47 |
| Msa0243910 | Msa0282590 | 0.923000 | 4.723042e-89 | -8.615850e-47 |
| Msa0243910 | Msa0282600 | 0.844389 | 7.790682e-59 | -8.615850e-47 |
| Msa0243910 | Msa0304740 | 0.821464 | 3.981994e-53 | -8.615850e-47 |
| Msa0243910 | Msa0304990 | 0.821012 | 5.061755e-53 | -8.615850e-47 |
| Msa0243910 | Msa0331590 | 0.833221 | 6.040083e-56 | -8.615850e-47 |
| Msa0243910 | Msa0362740 | 0.820192 | 7.808112e-53 | -8.615850e-47 |
| Msa0243910 | Msa0365360 | 0.804090 | 2.551872e-49 | -8.615850e-47 |
| Msa0243910 | Msa0369360 | 0.824432 | 8.096370e-54 | -8.615850e-47 |
| Msa0243910 | Msa0405250 | -0.806220 | 9.142696e-50 | -8.615850e-47 |
| Msa0243910 | Msa0416800 | 0.845780 | 3.279728e-59 | -8.615850e-47 |
| Msa0243910 | Msa0431710 | 0.810180 | 1.310330e-50 | -8.615850e-47 |
| Msa0243910 | Msa0434890 | -0.805082 | 1.584880e-49 | -8.615850e-47 |
| Msa0243910 | Msa0436900 | 0.808066 | 3.716690e-50 | -8.615850e-47 |
| Msa0243910 | Msa0457370 | 0.841750 | 3.932515e-58 | -8.615850e-47 |
| Msa0243910 | Msa0463460 | 0.843591 | 1.275204e-58 | -8.615850e-47 |
| Msa0243910 | Msa0493850 | 0.841838 | 3.726875e-58 | -8.615850e-47 |
| Msa0243910 | Msa0509020 | 0.849853 | 2.475907e-60 | -8.615850e-47 |
| Msa0243910 | Msa0557680 | 0.852870 | 3.476479e-61 | -8.615850e-47 |
| Msa0243910 | Msa0562650 | 0.823268 | 1.518118e-53 | -8.615850e-47 |
| Msa0243910 | Msa0586430 | 0.820399 | 7.002894e-53 | -8.615850e-47 |
| Msa0243910 | Msa0591780 | 0.803947 | 2.733837e-49 | -8.615850e-47 |
| Msa0243910 | Msa0616560 | -0.814859 | 1.243134e-51 | -8.615850e-47 |
| Msa0243910 | Msa0626470 | 0.843516 | 1.335395e-58 | -8.615850e-47 |
| Msa0243910 | Msa0641020 | 0.814202 | 1.737534e-51 | -8.615850e-47 |
| Msa0243910 | Msa0645460 | 0.816749 | 4.710056e-52 | -8.615850e-47 |
| Msa0243910 | Msa0653020 | 0.834300 | 3.246224e-56 | -8.615850e-47 |
| Msa0243910 | Msa0655990 | -0.806276 | 8.897479e-50 | -8.615850e-47 |
| Msa0243910 | Msa0664160 | 0.820540 | 6.499853e-53 | -8.615850e-47 |
| Msa0243910 | Msa0692620 | 0.802997 | 4.301706e-49 | -8.615850e-47 |
| Msa0243910 | Msa0695410 | 0.821215 | 4.545575e-53 | -8.615850e-47 |
| Msa0243910 | Msa0701840 | -0.805035 | 1.621260e-49 | -8.615850e-47 |
| Msa0243910 | Msa0708330 | 0.814683 | 1.359908e-51 | -8.615850e-47 |
| Msa0243910 | Msa0718240 | 0.807075 | 6.033654e-50 | -8.615850e-47 |
| Msa0243910 | Msa0719490 | -0.841597 | 4.316071e-58 | -8.615850e-47 |
| Msa0243910 | Msa0722930 | 0.822572 | 2.205380e-53 | -8.615850e-47 |
| Msa0243910 | Msa0723140 | 0.809490 | 1.844506e-50 | -8.615850e-47 |
| Msa0243910 | Msa0733200 | 0.867034 | 1.841978e-65 | -8.615850e-47 |
| Msa0243910 | Msa0736060 | 0.826279 | 2.960483e-54 | -8.615850e-47 |
| Msa0243910 | Msa0749550 | 0.810963 | 8.873391e-51 | -8.615850e-47 |
| Msa0243910 | Msa0749610 | 0.800238 | 1.582718e-48 | -8.615850e-47 |
| Msa0243910 | Msa0773610 | 0.807861 | 4.109165e-50 | -8.615850e-47 |
| Msa0243910 | Msa0774240 | 0.803767 | 2.979544e-49 | -8.615850e-47 |
| Msa0243910 | Msa0777930 | 0.800473 | 1.417714e-48 | -8.615850e-47 |
| Msa0243910 | Msa0811000 | 0.819823 | 9.486605e-53 | -8.615850e-47 |
| Msa0243910 | Msa0811790 | 0.824205 | 9.157015e-54 | -8.615850e-47 |
| Msa0243910 | Msa0826650 | 0.813863 | 2.064107e-51 | -8.615850e-47 |
| Msa0243910 | Msa0839230 | 0.802322 | 5.928155e-49 | -8.615850e-47 |
| Msa0243910 | Msa0843280 | 0.804977 | 1.666824e-49 | -8.615850e-47 |
| Msa0243910 | Msa0862020 | 0.814714 | 1.338592e-51 | -8.615850e-47 |
| Msa0243910 | Msa0864690 | 0.810558 | 1.085821e-50 | -8.615850e-47 |
| Msa0243910 | Msa0880080 | 0.800241 | 1.580843e-48 | -8.615850e-47 |
| Msa0243910 | Msa0886660 | 0.843968 | 1.011073e-58 | -8.615850e-47 |
| Msa0243910 | Msa0902980 | 0.814054 | 1.872482e-51 | -8.615850e-47 |
| Msa0243910 | Msa0912470 | 0.802222 | 6.215960e-49 | -8.615850e-47 |
| Msa0243910 | Msa0921630 | 0.824373 | 8.359361e-54 | -8.615850e-47 |
| Msa0243910 | Msa0946120 | 0.827621 | 1.413603e-54 | -8.615850e-47 |
| Msa0243910 | Msa0946680 | 0.811949 | 5.419884e-51 | -8.615850e-47 |
| Msa0243910 | Msa0951720 | 0.816510 | 5.328033e-52 | -8.615850e-47 |
| Msa0243910 | Msa0968320 | -0.848805 | 4.848364e-60 | -8.615850e-47 |
| Msa0243910 | Msa1000020 | 0.801658 | 8.114099e-49 | -8.615850e-47 |
| Msa0243910 | Msa1001200 | 0.806432 | 8.248699e-50 | -8.615850e-47 |
| Msa0243910 | Msa1008340 | 0.872302 | 3.529192e-67 | -8.615850e-47 |
| Msa0243910 | Msa1009020 | 0.825333 | 4.963335e-54 | -8.615850e-47 |
| Msa0243910 | Msa1026500 | 0.811596 | 6.469132e-51 | -8.615850e-47 |
| Msa0243910 | Msa1042710 | 0.802829 | 4.660131e-49 | -8.615850e-47 |
| Msa0243910 | Msa1044090 | 0.943691 | 7.616225e-103 | -8.615850e-47 |
| Msa0243910 | Msa1049950 | 0.838266 | 3.185374e-57 | -8.615850e-47 |
| Msa0243910 | Msa1074570 | 0.801944 | 7.089171e-49 | -8.615850e-47 |
| Msa0243910 | Msa1076460 | 0.815631 | 8.371881e-52 | -8.615850e-47 |
| Msa0243910 | Msa1076470 | 0.824891 | 6.314476e-54 | -8.615850e-47 |
| Msa0243910 | Msa1076480 | 0.834637 | 2.671109e-56 | -8.615850e-47 |
| Msa0243910 | Msa1083410 | 0.839542 | 1.488915e-57 | -8.615850e-47 |
| Msa0243910 | Msa1100170 | 0.806749 | 7.073639e-50 | -8.615850e-47 |
| Msa0243910 | Msa1101620 | 0.801086 | 1.062850e-48 | -8.615850e-47 |
| Msa0243910 | Msa1111760 | 0.829726 | 4.381802e-55 | -8.615850e-47 |
| Msa0243910 | Msa1122660 | 0.841481 | 4.629318e-58 | -8.615850e-47 |
| Msa0243910 | Msa1125040 | 0.800538 | 1.374869e-48 | -8.615850e-47 |
| Msa0243910 | Msa1128160 | 0.804796 | 1.818633e-49 | -8.615850e-47 |
| Msa0243910 | Msa1139240 | 0.867154 | 1.687141e-65 | -8.615850e-47 |
| Msa0243910 | Msa1154070 | 0.829627 | 4.630910e-55 | -8.615850e-47 |
| Msa0243910 | Msa1165360 | 0.804958 | 1.682366e-49 | -8.615850e-47 |
| Msa0243910 | Msa1170040 | -0.812672 | 3.768201e-51 | -8.615850e-47 |
| Msa0243910 | Msa1194930 | 0.800053 | 1.725871e-48 | -8.615850e-47 |
| Msa0243910 | Msa1209560 | 0.803829 | 2.892131e-49 | -8.615850e-47 |
| Msa0243910 | Msa1220710 | 0.809171 | 2.158539e-50 | -8.615850e-47 |
| Msa0243910 | Msa1246040 | 0.820187 | 7.830527e-53 | -8.615850e-47 |
| Msa0243910 | Msa1248550 | 0.801771 | 7.694256e-49 | -8.615850e-47 |
| Msa0243910 | Msa1261470 | 0.803354 | 3.628655e-49 | -8.615850e-47 |
| Msa0243910 | Msa1267200 | 0.839440 | 1.582631e-57 | -8.615850e-47 |
| Msa0243910 | Msa1271280 | 0.810866 | 9.316848e-51 | -8.615850e-47 |
| Msa0243910 | Msa1271290 | 0.808246 | 3.403966e-50 | -8.615850e-47 |
| Msa0243910 | Msa1271300 | 0.800180 | 1.626307e-48 | -8.615850e-47 |
| Msa0243910 | Msa1279860 | 0.800938 | 1.139642e-48 | -8.615850e-47 |
| Msa0243910 | Msa1279870 | 0.808552 | 2.927754e-50 | -8.615850e-47 |
| Msa0243910 | Msa1289640 | 0.803852 | 2.860272e-49 | -8.615850e-47 |
| Msa0243910 | Msa1296960 | -0.810038 | 1.406215e-50 | -8.615850e-47 |
| Msa0243910 | Msa1303640 | 0.807972 | 3.892131e-50 | -8.615850e-47 |
| Msa0243910 | Msa1330530 | 0.807800 | 4.235553e-50 | -8.615850e-47 |
| Msa0243910 | Msa1335770 | 0.813868 | 2.058385e-51 | -8.615850e-47 |
| Msa0243910 | Msa1336470 | 0.800814 | 1.208068e-48 | -8.615850e-47 |
| Msa0243910 | Msa1348500 | 0.806962 | 6.374998e-50 | -8.615850e-47 |
| Msa0243910 | Msa1371080 | -0.837770 | 4.271436e-57 | -8.615850e-47 |
| Msa0243910 | Msa1405480 | 0.802046 | 6.754081e-49 | -8.615850e-47 |
| Msa0243910 | Msa1445250 | 0.808109 | 3.639285e-50 | -8.615850e-47 |
| Msa0243910 | Msa1447440 | 0.807770 | 4.296453e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0243910 | MtrunA17_Chr2g0297701 | 98.361 | 305 | 5 | 0 | 180 | 484 | 280 | 584 | 0.0 | 611 |
| Msa0243910 | MtrunA17_Chr2g0297701 | 86.076 | 158 | 21 | 1 | 15 | 171 | 26 | 183 | 1.66e-88 | 282 |
| Msa0243910 | MtrunA17_Chr2g0297711 | 50.973 | 514 | 208 | 7 | 12 | 483 | 29 | 540 | 1.30e-173 | 499 |
| Msa0243910 | MtrunA17_Chr2g0297691 | 62.376 | 303 | 112 | 2 | 182 | 483 | 404 | 705 | 1.66e-125 | 381 |
| Msa0243910 | MtrunA17_Chr2g0297691 | 45.833 | 168 | 88 | 1 | 16 | 180 | 140 | 307 | 2.78e-45 | 168 |
| Msa0243910 | MtrunA17_Chr2g0297491 | 60.596 | 302 | 118 | 1 | 182 | 483 | 91 | 391 | 1.36e-124 | 369 |
| Msa0243910 | MtrunA17_Chr2g0297681 | 60.066 | 303 | 119 | 2 | 182 | 483 | 402 | 703 | 1.04e-118 | 364 |
| Msa0243910 | MtrunA17_Chr2g0297681 | 45.238 | 168 | 89 | 1 | 16 | 180 | 138 | 305 | 5.66e-46 | 170 |
| Msa0243910 | MtrunA17_Chr2g0297481 | 58.278 | 302 | 121 | 2 | 182 | 483 | 189 | 485 | 1.73e-116 | 351 |
| Msa0243910 | MtrunA17_Chr2g0297481 | 43.478 | 92 | 52 | 0 | 89 | 180 | 1 | 92 | 4.78e-20 | 92.8 |
| Msa0243910 | MtrunA17_Chr2g0297651 | 58.609 | 302 | 124 | 1 | 182 | 483 | 404 | 704 | 1.51e-114 | 353 |
| Msa0243910 | MtrunA17_Chr2g0297651 | 44.048 | 168 | 91 | 1 | 16 | 180 | 140 | 307 | 4.29e-43 | 162 |
| Msa0243910 | MtrunA17_Chr5g0410201 | 42.568 | 296 | 159 | 4 | 182 | 471 | 37 | 327 | 3.70e-73 | 234 |
| Msa0243910 | MtrunA17_Chr5g0410271 | 40.379 | 317 | 177 | 5 | 163 | 472 | 16 | 327 | 5.15e-72 | 231 |
| Msa0243910 | MtrunA17_Chr5g0410171 | 40.062 | 322 | 176 | 7 | 159 | 471 | 420 | 733 | 3.74e-69 | 234 |
| Msa0243910 | MtrunA17_Chr5g0410371 | 41.000 | 300 | 167 | 3 | 174 | 470 | 3 | 295 | 5.45e-66 | 214 |
| Msa0243910 | MtrunA17_Chr6g0456141 | 39.228 | 311 | 186 | 3 | 159 | 468 | 72 | 380 | 1.62e-65 | 216 |
| Msa0243910 | MtrunA17_Chr5g0410461 | 41.254 | 303 | 163 | 4 | 174 | 470 | 170 | 463 | 8.61e-63 | 211 |
| Msa0243910 | MtrunA17_Chr5g0410341 | 38.591 | 298 | 172 | 4 | 182 | 473 | 455 | 747 | 2.66e-62 | 216 |
| Msa0243910 | MtrunA17_Chr5g0443001 | 40.066 | 302 | 170 | 4 | 177 | 470 | 304 | 602 | 5.61e-62 | 213 |
| Msa0243910 | MtrunA17_Chr5g0443001 | 31.132 | 212 | 127 | 6 | 35 | 238 | 33 | 233 | 7.33e-15 | 77.0 |
| Msa0243910 | MtrunA17_Chr6g0456101 | 40.864 | 301 | 175 | 3 | 182 | 482 | 453 | 750 | 3.63e-60 | 210 |
| Msa0243910 | MtrunA17_Chr6g0457101 | 38.235 | 306 | 180 | 4 | 182 | 484 | 400 | 699 | 1.23e-58 | 205 |
| Msa0243910 | MtrunA17_Chr3g0100301 | 45.813 | 203 | 109 | 1 | 265 | 466 | 205 | 407 | 2.19e-52 | 182 |
| Msa0243910 | MtrunA17_Chr5g0410581 | 36.519 | 293 | 181 | 3 | 180 | 467 | 500 | 792 | 2.44e-52 | 189 |
| Msa0243910 | MtrunA17_Chr3g0098481 | 35.052 | 291 | 182 | 4 | 182 | 466 | 39 | 328 | 2.15e-48 | 170 |
| Msa0243910 | MtrunA17_Chr2g0286601 | 34.028 | 288 | 185 | 2 | 180 | 465 | 391 | 675 | 3.61e-47 | 173 |
| Msa0243910 | MtrunA17_Chr2g0286601 | 30.769 | 182 | 116 | 4 | 40 | 215 | 13 | 190 | 8.61e-16 | 80.1 |
| Msa0243910 | MtrunA17_Chr5g0410191 | 42.188 | 192 | 110 | 1 | 280 | 471 | 2 | 192 | 8.08e-46 | 158 |
| Msa0243910 | MtrunA17_Chr2g0286551 | 34.333 | 300 | 185 | 4 | 180 | 477 | 371 | 660 | 3.64e-44 | 164 |
| Msa0243910 | MtrunA17_Chr2g0286551 | 30.601 | 183 | 115 | 4 | 40 | 215 | 13 | 190 | 9.14e-17 | 83.2 |
| Msa0243910 | MtrunA17_Chr3g0102001 | 35.135 | 296 | 182 | 3 | 180 | 468 | 442 | 734 | 1.15e-43 | 164 |
| Msa0243910 | MtrunA17_Chr2g0297631 | 43.017 | 179 | 95 | 1 | 2 | 180 | 141 | 312 | 3.93e-43 | 163 |
| Msa0243910 | MtrunA17_Chr5g0439061 | 36.082 | 291 | 181 | 3 | 180 | 466 | 438 | 727 | 6.96e-42 | 159 |
| Msa0243910 | MtrunA17_Chr3g0100741 | 33.948 | 271 | 175 | 3 | 182 | 451 | 311 | 578 | 2.64e-41 | 155 |
| Msa0243910 | MtrunA17_Chr3g0100741 | 36.585 | 123 | 77 | 1 | 34 | 155 | 34 | 156 | 2.75e-14 | 75.5 |
| Msa0243910 | MtrunA17_Chr3g0098531 | 31.183 | 279 | 186 | 4 | 193 | 466 | 3 | 280 | 3.14e-39 | 144 |
| Msa0243910 | MtrunA17_Chr2g0284501 | 35.211 | 284 | 177 | 4 | 180 | 462 | 370 | 647 | 6.14e-39 | 150 |
| Msa0243910 | MtrunA17_Chr3g0096941 | 32.841 | 271 | 178 | 3 | 182 | 451 | 312 | 579 | 5.37e-38 | 146 |
| Msa0243910 | MtrunA17_Chr3g0096941 | 36.434 | 129 | 81 | 1 | 34 | 161 | 34 | 162 | 1.34e-15 | 79.3 |
| Msa0243910 | MtrunA17_Chr5g0410451 | 45.098 | 153 | 84 | 0 | 275 | 427 | 36 | 188 | 7.20e-38 | 138 |
| Msa0243910 | MtrunA17_Chr5g0410541 | 46.309 | 149 | 79 | 1 | 280 | 428 | 23 | 170 | 1.72e-36 | 134 |
| Msa0243910 | MtrunA17_Chr2g0284541 | 34.859 | 284 | 176 | 5 | 180 | 462 | 354 | 629 | 1.03e-35 | 140 |
| Msa0243910 | MtrunA17_Chr2g0286561 | 36.224 | 196 | 125 | 0 | 270 | 465 | 5 | 200 | 5.01e-35 | 130 |
| Msa0243910 | MtrunA17_Chr3g0098301 | 29.655 | 290 | 197 | 4 | 182 | 465 | 105 | 393 | 2.82e-32 | 127 |
| Msa0243910 | MtrunA17_Chr1g0211541 | 26.316 | 456 | 303 | 10 | 39 | 477 | 72 | 511 | 7.21e-30 | 122 |
| Msa0243910 | MtrunA17_Chr1g0211541 | 35.772 | 123 | 79 | 0 | 39 | 161 | 2 | 124 | 1.26e-16 | 82.4 |
| Msa0243910 | MtrunA17_Chr5g0439081 | 33.171 | 205 | 128 | 3 | 280 | 483 | 15 | 211 | 3.70e-29 | 114 |
| Msa0243910 | MtrunA17_Chr5g0439051 | 40.526 | 190 | 111 | 2 | 280 | 468 | 19 | 207 | 7.64e-29 | 113 |
| Msa0243910 | MtrunA17_Chr5g0410511 | 34.759 | 187 | 115 | 3 | 280 | 459 | 2 | 188 | 1.15e-28 | 112 |
| Msa0243910 | MtrunA17_Chr2g0297611 | 54.945 | 91 | 40 | 1 | 286 | 376 | 1 | 90 | 2.34e-28 | 107 |
| Msa0243910 | MtrunA17_Chr2g0297521 | 61.628 | 86 | 32 | 1 | 272 | 357 | 1 | 85 | 2.48e-28 | 107 |
| Msa0243910 | MtrunA17_Chr1g0211531 | 25.909 | 440 | 283 | 14 | 39 | 453 | 96 | 517 | 2.14e-25 | 109 |
| Msa0243910 | MtrunA17_Chr1g0211531 | 33.846 | 130 | 84 | 1 | 32 | 161 | 21 | 148 | 1.13e-15 | 79.7 |
| Msa0243910 | MtrunA17_Chr5g0410181 | 40.299 | 134 | 71 | 3 | 339 | 468 | 2 | 130 | 8.32e-23 | 94.0 |
| Msa0243910 | MtrunA17_Chr1g0211511 | 31.132 | 212 | 138 | 3 | 182 | 390 | 20 | 226 | 1.11e-21 | 95.9 |
| Msa0243910 | MtrunA17_Chr2g0297621 | 51.220 | 82 | 39 | 1 | 182 | 262 | 41 | 122 | 8.80e-19 | 82.4 |
| Msa0243910 | MtrunA17_Chr4g0030551 | 24.685 | 397 | 236 | 8 | 34 | 375 | 33 | 421 | 2.72e-18 | 87.8 |
| Msa0243910 | MtrunA17_Chr2g0297501 | 35.870 | 92 | 59 | 0 | 89 | 180 | 1 | 92 | 1.51e-16 | 75.1 |
| Msa0243910 | MtrunA17_Chr1g0212971 | 22.376 | 505 | 307 | 11 | 21 | 455 | 56 | 545 | 1.60e-16 | 82.4 |
| Msa0243910 | MtrunA17_Chr2g0297531 | 40.698 | 86 | 51 | 0 | 95 | 180 | 7 | 92 | 3.58e-16 | 77.4 |
| Msa0243910 | MtrunA17_Chr3g0100921 | 33.333 | 132 | 88 | 0 | 328 | 459 | 1 | 132 | 7.39e-15 | 71.6 |
| Msa0243910 | MtrunA17_Chr2g0286571 | 29.834 | 181 | 119 | 4 | 40 | 215 | 13 | 190 | 1.67e-14 | 74.7 |
| Msa0243910 | MtrunA17_Chr3g0100941 | 37.097 | 124 | 77 | 1 | 34 | 156 | 34 | 157 | 7.82e-14 | 70.1 |
| Msa0243910 | MtrunA17_Chr7g0263421 | 25.936 | 374 | 205 | 12 | 59 | 375 | 41 | 399 | 3.41e-13 | 71.6 |
| Msa0243910 | MtrunA17_Chr8g0353311 | 23.711 | 388 | 235 | 12 | 36 | 387 | 14 | 376 | 1.19e-11 | 66.6 |
| Msa0243910 | MtrunA17_Chr8g0367671 | 25.587 | 383 | 233 | 15 | 36 | 390 | 12 | 370 | 9.32e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0243910 | AT5G35810.1 | 47.541 | 305 | 154 | 3 | 182 | 480 | 38 | 342 | 5.21e-86 | 268 |
| Msa0243910 | AT3G18670.1 | 41.776 | 304 | 174 | 3 | 182 | 484 | 296 | 597 | 3.13e-73 | 243 |
| Msa0243910 | AT3G18670.1 | 28.025 | 157 | 106 | 2 | 2 | 156 | 24 | 175 | 1.17e-11 | 67.4 |
| Msa0243910 | AT3G18670.2 | 41.776 | 304 | 174 | 3 | 182 | 484 | 351 | 652 | 8.89e-73 | 243 |
| Msa0243910 | AT3G18670.2 | 28.025 | 157 | 106 | 2 | 2 | 156 | 24 | 175 | 1.38e-11 | 67.4 |
| Msa0243910 | AT5G04730.1 | 38.154 | 325 | 192 | 6 | 160 | 480 | 280 | 599 | 2.72e-61 | 211 |
| Msa0243910 | AT5G04700.1 | 40.273 | 293 | 173 | 2 | 180 | 470 | 364 | 656 | 8.77e-59 | 205 |
| Msa0243910 | AT3G54065.1 | 45.887 | 231 | 119 | 1 | 260 | 484 | 2 | 232 | 1.78e-56 | 188 |
| Msa0243910 | AT5G04680.2 | 37.086 | 302 | 178 | 4 | 180 | 470 | 228 | 528 | 5.42e-51 | 182 |
| Msa0243910 | AT5G04690.1 | 36.644 | 292 | 180 | 3 | 180 | 470 | 325 | 612 | 6.20e-51 | 183 |
| Msa0243910 | AT5G04690.3 | 36.644 | 292 | 180 | 3 | 180 | 470 | 345 | 632 | 9.72e-51 | 183 |
| Msa0243910 | AT5G04690.2 | 36.644 | 292 | 180 | 3 | 180 | 470 | 359 | 646 | 1.09e-50 | 183 |
| Msa0243910 | AT5G04680.3 | 37.086 | 302 | 178 | 4 | 180 | 470 | 337 | 637 | 2.51e-50 | 182 |
| Msa0243910 | AT5G04680.4 | 37.086 | 302 | 178 | 4 | 180 | 470 | 351 | 651 | 3.17e-50 | 182 |
| Msa0243910 | AT5G04680.1 | 37.086 | 302 | 178 | 4 | 180 | 470 | 380 | 680 | 4.34e-50 | 182 |
| Msa0243910 | AT5G35830.1 | 42.105 | 152 | 84 | 2 | 34 | 185 | 89 | 236 | 4.81e-29 | 116 |
| Msa0243910 | AT3G54070.1 | 36.000 | 150 | 92 | 2 | 36 | 185 | 54 | 199 | 5.32e-23 | 98.6 |
| Msa0243910 | AT3G12360.2 | 22.400 | 500 | 284 | 15 | 26 | 447 | 50 | 523 | 2.27e-19 | 91.7 |
| Msa0243910 | AT3G12360.1 | 22.400 | 500 | 284 | 15 | 26 | 447 | 62 | 535 | 2.27e-19 | 91.7 |
| Msa0243910 | AT3G09550.2 | 22.458 | 472 | 284 | 13 | 26 | 430 | 83 | 539 | 7.37e-14 | 74.3 |
| Msa0243910 | AT3G09550.1 | 22.458 | 472 | 284 | 13 | 26 | 430 | 76 | 532 | 9.09e-14 | 74.3 |
| Msa0243910 | AT3G09550.3 | 22.458 | 472 | 284 | 13 | 26 | 430 | 76 | 532 | 9.09e-14 | 74.3 |
| Msa0243910 | AT5G02620.4 | 23.909 | 481 | 276 | 18 | 34 | 448 | 19 | 475 | 1.09e-11 | 67.4 |
| Msa0243910 | AT5G02620.1 | 23.909 | 481 | 276 | 18 | 34 | 448 | 19 | 475 | 1.09e-11 | 67.4 |
| Msa0243910 | AT5G02620.3 | 23.909 | 481 | 276 | 18 | 34 | 448 | 19 | 475 | 1.09e-11 | 67.4 |
Find 93 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAATTTGATACATGAAATA+AGG | 0.181057 | 2_2:-21641390 | Msa0243910:CDS |
| ATGAATTGTTGCCATCAATT+AGG | 0.186457 | 2_2:-21641690 | Msa0243910:CDS |
| TCGAGTATTTCTTTACATTT+AGG | 0.190510 | 2_2:+21641595 | None:intergenic |
| CATTAACATTACCATGAAAT+AGG | 0.220099 | 2_2:+21640431 | None:intergenic |
| GCTGGTTTATCTAAATAATT+AGG | 0.228180 | 2_2:+21640912 | None:intergenic |
| GCTTTGAAAGATTGCATAAA+TGG | 0.257637 | 2_2:-21641367 | Msa0243910:CDS |
| CTGAGTTCCCATAACAAATT+AGG | 0.270857 | 2_2:+21641469 | None:intergenic |
| TGAATTGTTGCCATCAATTA+GGG | 0.271979 | 2_2:-21641689 | Msa0243910:CDS |
| TAGTGAGATGGCATGGTATT+TGG | 0.287030 | 2_2:-21641555 | Msa0243910:CDS |
| CATATTATCATGGTTTGAAA+TGG | 0.303488 | 2_2:-21640686 | Msa0243910:CDS |
| ACATTTGTAGTTCTTTATTT+AGG | 0.305317 | 2_2:-21640569 | Msa0243910:CDS |
| CACTTATCCTAATTTGTTAT+GGG | 0.313348 | 2_2:-21641476 | Msa0243910:CDS |
| GCACTTATCCTAATTTGTTA+TGG | 0.313386 | 2_2:-21641477 | Msa0243910:CDS |
| GCAAGAACAGAAATAAAATT+AGG | 0.316156 | 2_2:+21640660 | None:intergenic |
| GATTTGCTCCCGCTGCAATA+TGG | 0.321893 | 2_2:+21641851 | None:intergenic |
| CTTCACAAAGCAGCACTAAA+AGG | 0.335945 | 2_2:-21641958 | Msa0243910:CDS |
| TGTTCACTTTGTCGAGGAAT+TGG | 0.345157 | 2_2:-21641827 | Msa0243910:CDS |
| CAATTTGATACATGAAATAA+GGG | 0.346894 | 2_2:-21641389 | Msa0243910:CDS |
| ACTAATGCACCGTGATCATT+TGG | 0.358694 | 2_2:-21641800 | Msa0243910:CDS |
| GAAGGGGAACACATTGGTTT+AGG | 0.361388 | 2_2:+21641977 | None:intergenic |
| TGTTCAACTTGCTGAGATAT+TGG | 0.369153 | 2_2:-21641722 | Msa0243910:CDS |
| CACGCAGAATTGCTTCAAAA+AGG | 0.370906 | 2_2:-21641053 | Msa0243910:CDS |
| AAGGCATTGCGCCTATTTCA+TGG | 0.394651 | 2_2:-21640442 | Msa0243910:three_prime_UTR |
| GGTTGCCCAGCCATTTGTTA+TGG | 0.404362 | 2_2:+21641879 | None:intergenic |
| CCTTGTCCACCCCTAATTGA+TGG | 0.405706 | 2_2:+21641679 | None:intergenic |
| CACAAATAACGCCACTAGTC+CGG | 0.427785 | 2_2:+21640755 | None:intergenic |
| AAATGATGCTCGAATTATCA+TGG | 0.437423 | 2_2:-21641252 | Msa0243910:CDS |
| AGGTGTTACTCCTCTTTACT+TGG | 0.437846 | 2_2:-21641659 | Msa0243910:CDS |
| ATATTATCATGGTTTGAAAT+GGG | 0.443778 | 2_2:-21640685 | Msa0243910:CDS |
| CTCTGCAATGAAATTGATTG+AGG | 0.445736 | 2_2:+21642017 | None:intergenic |
| CTAAAAGGTGATTGGAAAGA+AGG | 0.452948 | 2_2:-21641943 | Msa0243910:CDS |
| TTCTACATAACATATTATCA+TGG | 0.459801 | 2_2:-21640696 | Msa0243910:CDS |
| AAGCAGCACTAAAAGGTGAT+TGG | 0.463773 | 2_2:-21641951 | Msa0243910:CDS |
| GGTATTATCGCCGCAGAAGT+TGG | 0.464944 | 2_2:-21641529 | Msa0243910:CDS |
| TTGCCTTTGAAGTTGATATC+CGG | 0.466565 | 2_2:-21640774 | Msa0243910:CDS |
| GTTTCGACTCTCATAGCTAC+AGG | 0.467654 | 2_2:-21640990 | Msa0243910:CDS |
| CTGATTTCTGCCATAACAAA+TGG | 0.468918 | 2_2:-21641889 | Msa0243910:CDS |
| GAGACTATATTGAGCCGATC+AGG | 0.472006 | 2_2:+21641289 | None:intergenic |
| GCAAACAGCGAATTCTTGTA+TGG | 0.482111 | 2_2:-21641015 | Msa0243910:CDS |
| AAATCAGCAATGTTGGATCT+TGG | 0.484030 | 2_2:+21641905 | None:intergenic |
| TCTGCAATGAAATTGATTGA+GGG | 0.490761 | 2_2:+21642018 | None:intergenic |
| CAATGTTAGCACCGCCTGAT+CGG | 0.494071 | 2_2:-21641303 | Msa0243910:CDS |
| TCAGCTGCATTTAGCTTACC+AGG | 0.494468 | 2_2:-21640960 | Msa0243910:CDS |
| GCTCCGCATATCGCGAGATA+AGG | 0.498008 | 2_2:+21640814 | None:intergenic |
| TTTCTGCCATAACAAATGGC+TGG | 0.499899 | 2_2:-21641885 | Msa0243910:CDS |
| AAAGCAAATACGAGGAATGC+TGG | 0.502490 | 2_2:+21640894 | None:intergenic |
| ACCGCACTCCATATTGCAGC+GGG | 0.502589 | 2_2:-21641859 | Msa0243910:CDS |
| ATGGCAGAAATCAGCAATGT+TGG | 0.503043 | 2_2:+21641898 | None:intergenic |
| GCTCGAATTATCATGGTTTG+AGG | 0.512843 | 2_2:-21641245 | Msa0243910:intron |
| AAATAAAGAACTACAAATGT+AGG | 0.513663 | 2_2:+21640572 | None:intergenic |
| TTTGGAATTGCAAGATTGCT+CGG | 0.517151 | 2_2:-21641782 | Msa0243910:CDS |
| CTCAATCAATTTCATTGCAG+AGG | 0.521162 | 2_2:-21642016 | Msa0243910:CDS |
| TTCTGCCATAACAAATGGCT+GGG | 0.532460 | 2_2:-21641884 | Msa0243910:CDS |
| TTGGAATTGCAAGATTGCTC+GGG | 0.533926 | 2_2:-21641781 | Msa0243910:CDS |
| ATTTGCTTTATCCGACTCCA+TGG | 0.541197 | 2_2:-21640880 | Msa0243910:CDS |
| GTGTTATCATTGTTTCCACC+TGG | 0.542558 | 2_2:+21640942 | None:intergenic |
| TGTAAAACAGCCAAGTAAAG+AGG | 0.542761 | 2_2:+21641649 | None:intergenic |
| TTTAGTGCTGCTTTGTGAAG+GGG | 0.544540 | 2_2:+21641961 | None:intergenic |
| CTTTGTGAAGGGGAACACAT+TGG | 0.546773 | 2_2:+21641971 | None:intergenic |
| TGATCGGCTCAATATAGTCT+CGG | 0.546856 | 2_2:-21641287 | Msa0243910:CDS |
| CCATCAATTAGGGGTGGACA+AGG | 0.554840 | 2_2:-21641679 | Msa0243910:CDS |
| GATCGGCTCAATATAGTCTC+GGG | 0.558296 | 2_2:-21641286 | Msa0243910:CDS |
| CTCAAAATTTCCAACTTCTG+CGG | 0.567720 | 2_2:+21641519 | None:intergenic |
| AAATACTCGAGGAAAACGAT+TGG | 0.569851 | 2_2:-21641582 | Msa0243910:CDS |
| TAGCGAATCATACGTTTACT+CGG | 0.572760 | 2_2:+21640546 | None:intergenic |
| CGAGATAAGTGCCATGGAGT+CGG | 0.585094 | 2_2:+21640869 | None:intergenic |
| CGCATATCGCGAGATAAGGA+TGG | 0.586729 | 2_2:+21640818 | None:intergenic |
| CATCCTTATCTCGCGATATG+CGG | 0.590914 | 2_2:-21640817 | Msa0243910:CDS |
| GTTATGGGAACTCAGTAACA+AGG | 0.591126 | 2_2:-21641461 | Msa0243910:CDS |
| AAGCAAACAGTGAGATGGCA+TGG | 0.593244 | 2_2:-21641627 | Msa0243910:CDS |
| GAAGTTGATATCCGGACTAG+TGG | 0.593266 | 2_2:-21640766 | Msa0243910:CDS |
| AGACATATAAACAACGGTAT+CGG | 0.594156 | 2_2:+21640630 | None:intergenic |
| AGTCCGGATATCAACTTCAA+AGG | 0.603725 | 2_2:+21640771 | None:intergenic |
| ACGATTGGAGTATAGTGAGA+TGG | 0.609715 | 2_2:-21641567 | Msa0243910:CDS |
| TCAAATTGAAGATACTAGCA+TGG | 0.613242 | 2_2:+21641404 | None:intergenic |
| TGAAGACGAGATAAGTGCCA+TGG | 0.615834 | 2_2:+21640863 | None:intergenic |
| TTTACAAGCAAACAGTGAGA+TGG | 0.616121 | 2_2:-21641632 | Msa0243910:CDS |
| TGGAGTATAGTGAGATGGCA+TGG | 0.616241 | 2_2:-21641562 | Msa0243910:CDS |
| TTGTTGCCATCAATTAGGGG+TGG | 0.620541 | 2_2:-21641685 | Msa0243910:CDS |
| AACCGCACTCCATATTGCAG+CGG | 0.625156 | 2_2:-21641860 | Msa0243910:CDS |
| AAATCATGTTCACTTTGTCG+AGG | 0.626112 | 2_2:-21641833 | Msa0243910:CDS |
| ACTATATTGAGCCGATCAGG+CGG | 0.628275 | 2_2:+21641292 | None:intergenic |
| CTTGCAATTCCAAATGATCA+CGG | 0.637982 | 2_2:+21641791 | None:intergenic |
| TTATGGGAACTCAGTAACAA+GGG | 0.656955 | 2_2:-21641460 | Msa0243910:CDS |
| GAATTGTTGCCATCAATTAG+GGG | 0.658510 | 2_2:-21641688 | Msa0243910:CDS |
| AACTGTAGACATATAAACAA+CGG | 0.659566 | 2_2:+21640624 | None:intergenic |
| AGATGGCATGGTATTTGGCA+TGG | 0.672818 | 2_2:-21641550 | Msa0243910:CDS |
| TCTTTCGTAAATAGTTCGCG+AGG | 0.675200 | 2_2:+21641077 | None:intergenic |
| GCTGCATTTAGCTTACCAGG+TGG | 0.684232 | 2_2:-21640957 | Msa0243910:CDS |
| TAAATGTAAAGAAATACTCG+AGG | 0.687289 | 2_2:-21641593 | Msa0243910:CDS |
| TCCCGCTGCAATATGGAGTG+CGG | 0.708642 | 2_2:+21641858 | None:intergenic |
| AGTCGGATAAAGCAAATACG+AGG | 0.727881 | 2_2:+21640886 | None:intergenic |
| AATTGAAGATACTAGCATGG+CGG | 0.757307 | 2_2:+21641407 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCTAATTGTTTTTAAATCTA+AGG | - | chr2_2:21642007-21642026 | Msa0243910:CDS | 15.0% |
| !!! | TCTAATTGTTTTTAAATCTA+AGG | - | chr2_2:21642007-21642026 | Msa0243910:CDS | 15.0% |
| !! | TCAATTTGATACATGAAATA+AGG | - | chr2_2:21641078-21641097 | Msa0243910:CDS | 20.0% |
| !! | CAATTTGATACATGAAATAA+GGG | - | chr2_2:21641079-21641098 | Msa0243910:CDS | 20.0% |
| !!! | TTTTTCATTTCAATCATATG+TGG | + | chr2_2:21641355-21641374 | None:intergenic | 20.0% |
| !! | ATTGAAATGAAAAATTCTGA+AGG | - | chr2_2:21641361-21641380 | Msa0243910:CDS | 20.0% |
| !! | TTCTACATAACATATTATCA+TGG | - | chr2_2:21641772-21641791 | Msa0243910:CDS | 20.0% |
| !!! | ATATTATCATGGTTTGAAAT+GGG | - | chr2_2:21641783-21641802 | Msa0243910:CDS | 20.0% |
| !! | AAATAAAGAACTACAAATGT+AGG | + | chr2_2:21641899-21641918 | None:intergenic | 20.0% |
| !!! | ACATTTGTAGTTCTTTATTT+AGG | - | chr2_2:21641899-21641918 | Msa0243910:CDS | 20.0% |
| !! | TCAATTTGATACATGAAATA+AGG | - | chr2_2:21641078-21641097 | Msa0243910:CDS | 20.0% |
| !! | CAATTTGATACATGAAATAA+GGG | - | chr2_2:21641079-21641098 | Msa0243910:CDS | 20.0% |
| !!! | TTTTTCATTTCAATCATATG+TGG | + | chr2_2:21641355-21641374 | None:intergenic | 20.0% |
| !! | ATTGAAATGAAAAATTCTGA+AGG | - | chr2_2:21641361-21641380 | Msa0243910:CDS | 20.0% |
| !! | TTCTACATAACATATTATCA+TGG | - | chr2_2:21641772-21641791 | Msa0243910:CDS | 20.0% |
| !!! | ATATTATCATGGTTTGAAAT+GGG | - | chr2_2:21641783-21641802 | Msa0243910:CDS | 20.0% |
| !! | AAATAAAGAACTACAAATGT+AGG | + | chr2_2:21641899-21641918 | None:intergenic | 20.0% |
| !!! | ACATTTGTAGTTCTTTATTT+AGG | - | chr2_2:21641899-21641918 | Msa0243910:CDS | 20.0% |
| ! | TCGAGTATTTCTTTACATTT+AGG | + | chr2_2:21640876-21640895 | None:intergenic | 25.0% |
| ! | TAAATGTAAAGAAATACTCG+AGG | - | chr2_2:21640875-21640894 | Msa0243910:CDS | 25.0% |
| !!! | CACTTATCCTAATTTGTTAT+GGG | - | chr2_2:21640992-21641011 | Msa0243910:CDS | 25.0% |
| !! | GCTGGTTTATCTAAATAATT+AGG | + | chr2_2:21641559-21641578 | None:intergenic | 25.0% |
| ! | CATATTATCATGGTTTGAAA+TGG | - | chr2_2:21641782-21641801 | Msa0243910:CDS | 25.0% |
| ! | GCAAGAACAGAAATAAAATT+AGG | + | chr2_2:21641811-21641830 | None:intergenic | 25.0% |
| ! | AACTGTAGACATATAAACAA+CGG | + | chr2_2:21641847-21641866 | None:intergenic | 25.0% |
| ! | CATTAACATTACCATGAAAT+AGG | + | chr2_2:21642040-21642059 | None:intergenic | 25.0% |
| ! | TCGAGTATTTCTTTACATTT+AGG | + | chr2_2:21640876-21640895 | None:intergenic | 25.0% |
| ! | TAAATGTAAAGAAATACTCG+AGG | - | chr2_2:21640875-21640894 | Msa0243910:CDS | 25.0% |
| !!! | CACTTATCCTAATTTGTTAT+GGG | - | chr2_2:21640992-21641011 | Msa0243910:CDS | 25.0% |
| !! | GCTGGTTTATCTAAATAATT+AGG | + | chr2_2:21641559-21641578 | None:intergenic | 25.0% |
| ! | CATATTATCATGGTTTGAAA+TGG | - | chr2_2:21641782-21641801 | Msa0243910:CDS | 25.0% |
| ! | GCAAGAACAGAAATAAAATT+AGG | + | chr2_2:21641811-21641830 | None:intergenic | 25.0% |
| ! | AACTGTAGACATATAAACAA+CGG | + | chr2_2:21641847-21641866 | None:intergenic | 25.0% |
| ! | CATTAACATTACCATGAAAT+AGG | + | chr2_2:21642040-21642059 | None:intergenic | 25.0% |
| TCTGCAATGAAATTGATTGA+GGG | + | chr2_2:21640453-21640472 | None:intergenic | 30.0% | |
| TTGCAGAGGAACATAAAAAA+AGG | - | chr2_2:21640466-21640485 | Msa0243910:three_prime_UTR | 30.0% | |
| ATGAATTGTTGCCATCAATT+AGG | - | chr2_2:21640778-21640797 | Msa0243910:CDS | 30.0% | |
| TGAATTGTTGCCATCAATTA+GGG | - | chr2_2:21640779-21640798 | Msa0243910:CDS | 30.0% | |
| !! | GCACTTATCCTAATTTGTTA+TGG | - | chr2_2:21640991-21641010 | Msa0243910:CDS | 30.0% |
| TCAAATTGAAGATACTAGCA+TGG | + | chr2_2:21641067-21641086 | None:intergenic | 30.0% | |
| !! | GCTTTGAAAGATTGCATAAA+TGG | - | chr2_2:21641101-21641120 | Msa0243910:CDS | 30.0% |
| ! | AGATTGCATAAATGGTTTTC+TGG | - | chr2_2:21641109-21641128 | Msa0243910:CDS | 30.0% |
| ! | ATAAATGGTTTTCTGGATGA+TGG | - | chr2_2:21641116-21641135 | Msa0243910:CDS | 30.0% |
| AAATGATGCTCGAATTATCA+TGG | - | chr2_2:21641216-21641235 | Msa0243910:intron | 30.0% | |
| AGACATATAAACAACGGTAT+CGG | + | chr2_2:21641841-21641860 | None:intergenic | 30.0% | |
| ! | TATGTCTACAGTTTTCTCTA+TGG | - | chr2_2:21641854-21641873 | Msa0243910:CDS | 30.0% |
| TCTGCAATGAAATTGATTGA+GGG | + | chr2_2:21640453-21640472 | None:intergenic | 30.0% | |
| TTGCAGAGGAACATAAAAAA+AGG | - | chr2_2:21640466-21640485 | Msa0243910:three_prime_UTR | 30.0% | |
| ATGAATTGTTGCCATCAATT+AGG | - | chr2_2:21640778-21640797 | Msa0243910:CDS | 30.0% | |
| TGAATTGTTGCCATCAATTA+GGG | - | chr2_2:21640779-21640798 | Msa0243910:CDS | 30.0% | |
| !! | GCACTTATCCTAATTTGTTA+TGG | - | chr2_2:21640991-21641010 | Msa0243910:CDS | 30.0% |
| TCAAATTGAAGATACTAGCA+TGG | + | chr2_2:21641067-21641086 | None:intergenic | 30.0% | |
| !! | GCTTTGAAAGATTGCATAAA+TGG | - | chr2_2:21641101-21641120 | Msa0243910:CDS | 30.0% |
| ! | AGATTGCATAAATGGTTTTC+TGG | - | chr2_2:21641109-21641128 | Msa0243910:CDS | 30.0% |
| ! | ATAAATGGTTTTCTGGATGA+TGG | - | chr2_2:21641116-21641135 | Msa0243910:CDS | 30.0% |
| AAATGATGCTCGAATTATCA+TGG | - | chr2_2:21641216-21641235 | Msa0243910:intron | 30.0% | |
| AGACATATAAACAACGGTAT+CGG | + | chr2_2:21641841-21641860 | None:intergenic | 30.0% | |
| ! | TATGTCTACAGTTTTCTCTA+TGG | - | chr2_2:21641854-21641873 | Msa0243910:CDS | 30.0% |
| CTCTGCAATGAAATTGATTG+AGG | + | chr2_2:21640454-21640473 | None:intergenic | 35.0% | |
| CTCAATCAATTTCATTGCAG+AGG | - | chr2_2:21640452-21640471 | Msa0243910:three_prime_UTR | 35.0% | |
| !!! | TTTTAGTGCTGCTTTGTGAA+GGG | + | chr2_2:21640511-21640530 | None:intergenic | 35.0% |
| CTAAAAGGTGATTGGAAAGA+AGG | - | chr2_2:21640525-21640544 | Msa0243910:three_prime_UTR | 35.0% | |
| AAATCAGCAATGTTGGATCT+TGG | + | chr2_2:21640566-21640585 | None:intergenic | 35.0% | |
| CTGATTTCTGCCATAACAAA+TGG | - | chr2_2:21640579-21640598 | Msa0243910:CDS | 35.0% | |
| AAATCATGTTCACTTTGTCG+AGG | - | chr2_2:21640635-21640654 | Msa0243910:CDS | 35.0% | |
| CTTGCAATTCCAAATGATCA+CGG | + | chr2_2:21640680-21640699 | None:intergenic | 35.0% | |
| ! | TTTGGAATTGCAAGATTGCT+CGG | - | chr2_2:21640686-21640705 | Msa0243910:CDS | 35.0% |
| !! | TGTTCAACTTGCTGAGATAT+TGG | - | chr2_2:21640746-21640765 | Msa0243910:CDS | 35.0% |
| GAATTGTTGCCATCAATTAG+GGG | - | chr2_2:21640780-21640799 | Msa0243910:CDS | 35.0% | |
| TGTAAAACAGCCAAGTAAAG+AGG | + | chr2_2:21640822-21640841 | None:intergenic | 35.0% | |
| TTTACAAGCAAACAGTGAGA+TGG | - | chr2_2:21640836-21640855 | Msa0243910:CDS | 35.0% | |
| AAATACTCGAGGAAAACGAT+TGG | - | chr2_2:21640886-21640905 | Msa0243910:CDS | 35.0% | |
| CTCAAAATTTCCAACTTCTG+CGG | + | chr2_2:21640952-21640971 | None:intergenic | 35.0% | |
| CTGAGTTCCCATAACAAATT+AGG | + | chr2_2:21641002-21641021 | None:intergenic | 35.0% | |
| TTATGGGAACTCAGTAACAA+GGG | - | chr2_2:21641008-21641027 | Msa0243910:CDS | 35.0% | |
| AATTGAAGATACTAGCATGG+CGG | + | chr2_2:21641064-21641083 | None:intergenic | 35.0% | |
| TGCTTCAAAAAGGAGAATCA+TGG | - | chr2_2:21641425-21641444 | Msa0243910:CDS | 35.0% | |
| !! | TTGCCTTTGAAGTTGATATC+CGG | - | chr2_2:21641694-21641713 | Msa0243910:CDS | 35.0% |
| TAGCGAATCATACGTTTACT+CGG | + | chr2_2:21641925-21641944 | None:intergenic | 35.0% | |
| CTCTGCAATGAAATTGATTG+AGG | + | chr2_2:21640454-21640473 | None:intergenic | 35.0% | |
| CTCAATCAATTTCATTGCAG+AGG | - | chr2_2:21640452-21640471 | Msa0243910:three_prime_UTR | 35.0% | |
| !!! | TTTTAGTGCTGCTTTGTGAA+GGG | + | chr2_2:21640511-21640530 | None:intergenic | 35.0% |
| CTAAAAGGTGATTGGAAAGA+AGG | - | chr2_2:21640525-21640544 | Msa0243910:three_prime_UTR | 35.0% | |
| AAATCAGCAATGTTGGATCT+TGG | + | chr2_2:21640566-21640585 | None:intergenic | 35.0% | |
| CTGATTTCTGCCATAACAAA+TGG | - | chr2_2:21640579-21640598 | Msa0243910:CDS | 35.0% | |
| AAATCATGTTCACTTTGTCG+AGG | - | chr2_2:21640635-21640654 | Msa0243910:CDS | 35.0% | |
| CTTGCAATTCCAAATGATCA+CGG | + | chr2_2:21640680-21640699 | None:intergenic | 35.0% | |
| ! | TTTGGAATTGCAAGATTGCT+CGG | - | chr2_2:21640686-21640705 | Msa0243910:CDS | 35.0% |
| !! | TGTTCAACTTGCTGAGATAT+TGG | - | chr2_2:21640746-21640765 | Msa0243910:CDS | 35.0% |
| GAATTGTTGCCATCAATTAG+GGG | - | chr2_2:21640780-21640799 | Msa0243910:CDS | 35.0% | |
| TGTAAAACAGCCAAGTAAAG+AGG | + | chr2_2:21640822-21640841 | None:intergenic | 35.0% | |
| TTTACAAGCAAACAGTGAGA+TGG | - | chr2_2:21640836-21640855 | Msa0243910:CDS | 35.0% | |
| AAATACTCGAGGAAAACGAT+TGG | - | chr2_2:21640886-21640905 | Msa0243910:CDS | 35.0% | |
| CTCAAAATTTCCAACTTCTG+CGG | + | chr2_2:21640952-21640971 | None:intergenic | 35.0% | |
| CTGAGTTCCCATAACAAATT+AGG | + | chr2_2:21641002-21641021 | None:intergenic | 35.0% | |
| TTATGGGAACTCAGTAACAA+GGG | - | chr2_2:21641008-21641027 | Msa0243910:CDS | 35.0% | |
| AATTGAAGATACTAGCATGG+CGG | + | chr2_2:21641064-21641083 | None:intergenic | 35.0% | |
| TGCTTCAAAAAGGAGAATCA+TGG | - | chr2_2:21641425-21641444 | Msa0243910:CDS | 35.0% | |
| !! | TTGCCTTTGAAGTTGATATC+CGG | - | chr2_2:21641694-21641713 | Msa0243910:CDS | 35.0% |
| TAGCGAATCATACGTTTACT+CGG | + | chr2_2:21641925-21641944 | None:intergenic | 35.0% | |
| !! | TTTAGTGCTGCTTTGTGAAG+GGG | + | chr2_2:21640510-21640529 | None:intergenic | 40.0% |
| !!! | CTTTTAGTGCTGCTTTGTGA+AGG | + | chr2_2:21640512-21640531 | None:intergenic | 40.0% |
| CTTCACAAAGCAGCACTAAA+AGG | - | chr2_2:21640510-21640529 | Msa0243910:three_prime_UTR | 40.0% | |
| AAGCAGCACTAAAAGGTGAT+TGG | - | chr2_2:21640517-21640536 | Msa0243910:three_prime_UTR | 40.0% | |
| ATGGCAGAAATCAGCAATGT+TGG | + | chr2_2:21640573-21640592 | None:intergenic | 40.0% | |
| TTTCTGCCATAACAAATGGC+TGG | - | chr2_2:21640583-21640602 | Msa0243910:CDS | 40.0% | |
| TTCTGCCATAACAAATGGCT+GGG | - | chr2_2:21640584-21640603 | Msa0243910:CDS | 40.0% | |
| TGTTCACTTTGTCGAGGAAT+TGG | - | chr2_2:21640641-21640660 | Msa0243910:CDS | 40.0% | |
| ACTAATGCACCGTGATCATT+TGG | - | chr2_2:21640668-21640687 | Msa0243910:CDS | 40.0% | |
| TTGGAATTGCAAGATTGCTC+GGG | - | chr2_2:21640687-21640706 | Msa0243910:CDS | 40.0% | |
| !! | AGGTGTTACTCCTCTTTACT+TGG | - | chr2_2:21640809-21640828 | Msa0243910:CDS | 40.0% |
| ACGATTGGAGTATAGTGAGA+TGG | - | chr2_2:21640901-21640920 | Msa0243910:CDS | 40.0% | |
| TAGTGAGATGGCATGGTATT+TGG | - | chr2_2:21640913-21640932 | Msa0243910:CDS | 40.0% | |
| GTTATGGGAACTCAGTAACA+AGG | - | chr2_2:21641007-21641026 | Msa0243910:CDS | 40.0% | |
| ! | TGATCGGCTCAATATAGTCT+CGG | - | chr2_2:21641181-21641200 | Msa0243910:intron | 40.0% |
| GCTCGAATTATCATGGTTTG+AGG | - | chr2_2:21641223-21641242 | Msa0243910:intron | 40.0% | |
| !! | ACATATGTCGTTGATTTCGC+AGG | - | chr2_2:21641309-21641328 | Msa0243910:CDS | 40.0% |
| TCTTTCGTAAATAGTTCGCG+AGG | + | chr2_2:21641394-21641413 | None:intergenic | 40.0% | |
| CACGCAGAATTGCTTCAAAA+AGG | - | chr2_2:21641415-21641434 | Msa0243910:CDS | 40.0% | |
| GCAAACAGCGAATTCTTGTA+TGG | - | chr2_2:21641453-21641472 | Msa0243910:CDS | 40.0% | |
| GTGTTATCATTGTTTCCACC+TGG | + | chr2_2:21641529-21641548 | None:intergenic | 40.0% | |
| AAAGCAAATACGAGGAATGC+TGG | + | chr2_2:21641577-21641596 | None:intergenic | 40.0% | |
| AGTCGGATAAAGCAAATACG+AGG | + | chr2_2:21641585-21641604 | None:intergenic | 40.0% | |
| ATTTGCTTTATCCGACTCCA+TGG | - | chr2_2:21641588-21641607 | Msa0243910:CDS | 40.0% | |
| AGTCCGGATATCAACTTCAA+AGG | + | chr2_2:21641700-21641719 | None:intergenic | 40.0% | |
| !! | TTTAGTGCTGCTTTGTGAAG+GGG | + | chr2_2:21640510-21640529 | None:intergenic | 40.0% |
| !!! | CTTTTAGTGCTGCTTTGTGA+AGG | + | chr2_2:21640512-21640531 | None:intergenic | 40.0% |
| CTTCACAAAGCAGCACTAAA+AGG | - | chr2_2:21640510-21640529 | Msa0243910:three_prime_UTR | 40.0% | |
| AAGCAGCACTAAAAGGTGAT+TGG | - | chr2_2:21640517-21640536 | Msa0243910:three_prime_UTR | 40.0% | |
| ATGGCAGAAATCAGCAATGT+TGG | + | chr2_2:21640573-21640592 | None:intergenic | 40.0% | |
| TTTCTGCCATAACAAATGGC+TGG | - | chr2_2:21640583-21640602 | Msa0243910:CDS | 40.0% | |
| TTCTGCCATAACAAATGGCT+GGG | - | chr2_2:21640584-21640603 | Msa0243910:CDS | 40.0% | |
| TGTTCACTTTGTCGAGGAAT+TGG | - | chr2_2:21640641-21640660 | Msa0243910:CDS | 40.0% | |
| ACTAATGCACCGTGATCATT+TGG | - | chr2_2:21640668-21640687 | Msa0243910:CDS | 40.0% | |
| TTGGAATTGCAAGATTGCTC+GGG | - | chr2_2:21640687-21640706 | Msa0243910:CDS | 40.0% | |
| !! | AGGTGTTACTCCTCTTTACT+TGG | - | chr2_2:21640809-21640828 | Msa0243910:CDS | 40.0% |
| ACGATTGGAGTATAGTGAGA+TGG | - | chr2_2:21640901-21640920 | Msa0243910:CDS | 40.0% | |
| TAGTGAGATGGCATGGTATT+TGG | - | chr2_2:21640913-21640932 | Msa0243910:CDS | 40.0% | |
| GTTATGGGAACTCAGTAACA+AGG | - | chr2_2:21641007-21641026 | Msa0243910:CDS | 40.0% | |
| ! | TGATCGGCTCAATATAGTCT+CGG | - | chr2_2:21641181-21641200 | Msa0243910:intron | 40.0% |
| GCTCGAATTATCATGGTTTG+AGG | - | chr2_2:21641223-21641242 | Msa0243910:intron | 40.0% | |
| !! | ACATATGTCGTTGATTTCGC+AGG | - | chr2_2:21641309-21641328 | Msa0243910:CDS | 40.0% |
| TCTTTCGTAAATAGTTCGCG+AGG | + | chr2_2:21641394-21641413 | None:intergenic | 40.0% | |
| CACGCAGAATTGCTTCAAAA+AGG | - | chr2_2:21641415-21641434 | Msa0243910:CDS | 40.0% | |
| GCAAACAGCGAATTCTTGTA+TGG | - | chr2_2:21641453-21641472 | Msa0243910:CDS | 40.0% | |
| GTGTTATCATTGTTTCCACC+TGG | + | chr2_2:21641529-21641548 | None:intergenic | 40.0% | |
| AAAGCAAATACGAGGAATGC+TGG | + | chr2_2:21641577-21641596 | None:intergenic | 40.0% | |
| AGTCGGATAAAGCAAATACG+AGG | + | chr2_2:21641585-21641604 | None:intergenic | 40.0% | |
| ATTTGCTTTATCCGACTCCA+TGG | - | chr2_2:21641588-21641607 | Msa0243910:CDS | 40.0% | |
| AGTCCGGATATCAACTTCAA+AGG | + | chr2_2:21641700-21641719 | None:intergenic | 40.0% | |
| !! | GAAGGGGAACACATTGGTTT+AGG | + | chr2_2:21640494-21640513 | None:intergenic | 45.0% |
| CTTTGTGAAGGGGAACACAT+TGG | + | chr2_2:21640500-21640519 | None:intergenic | 45.0% | |
| ! | TTGTGTTTTGCTGCAGCAGT+TGG | - | chr2_2:21640720-21640739 | Msa0243910:CDS | 45.0% |
| TTGTTGCCATCAATTAGGGG+TGG | - | chr2_2:21640783-21640802 | Msa0243910:CDS | 45.0% | |
| AAGCAAACAGTGAGATGGCA+TGG | - | chr2_2:21640841-21640860 | Msa0243910:CDS | 45.0% | |
| TGGAGTATAGTGAGATGGCA+TGG | - | chr2_2:21640906-21640925 | Msa0243910:CDS | 45.0% | |
| AGATGGCATGGTATTTGGCA+TGG | - | chr2_2:21640918-21640937 | Msa0243910:CDS | 45.0% | |
| ACTATATTGAGCCGATCAGG+CGG | + | chr2_2:21641179-21641198 | None:intergenic | 45.0% | |
| GAGACTATATTGAGCCGATC+AGG | + | chr2_2:21641182-21641201 | None:intergenic | 45.0% | |
| ! | GATCGGCTCAATATAGTCTC+GGG | - | chr2_2:21641182-21641201 | Msa0243910:intron | 45.0% |
| !! | TATGTCGTTGATTTCGCAGG+AGG | - | chr2_2:21641312-21641331 | Msa0243910:CDS | 45.0% |
| GTTTCGACTCTCATAGCTAC+AGG | - | chr2_2:21641478-21641497 | Msa0243910:CDS | 45.0% | |
| ! | TCAGCTGCATTTAGCTTACC+AGG | - | chr2_2:21641508-21641527 | Msa0243910:CDS | 45.0% |
| TGAAGACGAGATAAGTGCCA+TGG | + | chr2_2:21641608-21641627 | None:intergenic | 45.0% | |
| CATCCTTATCTCGCGATATG+CGG | - | chr2_2:21641651-21641670 | Msa0243910:CDS | 45.0% | |
| !! | GAAGTTGATATCCGGACTAG+TGG | - | chr2_2:21641702-21641721 | Msa0243910:CDS | 45.0% |
| CACAAATAACGCCACTAGTC+CGG | + | chr2_2:21641716-21641735 | None:intergenic | 45.0% | |
| !! | AAGGCATTGCGCCTATTTCA+TGG | - | chr2_2:21642026-21642045 | Msa0243910:CDS | 45.0% |
| !! | GAAGGGGAACACATTGGTTT+AGG | + | chr2_2:21640494-21640513 | None:intergenic | 45.0% |
| CTTTGTGAAGGGGAACACAT+TGG | + | chr2_2:21640500-21640519 | None:intergenic | 45.0% | |
| ! | TTGTGTTTTGCTGCAGCAGT+TGG | - | chr2_2:21640720-21640739 | Msa0243910:CDS | 45.0% |
| TTGTTGCCATCAATTAGGGG+TGG | - | chr2_2:21640783-21640802 | Msa0243910:CDS | 45.0% | |
| AAGCAAACAGTGAGATGGCA+TGG | - | chr2_2:21640841-21640860 | Msa0243910:CDS | 45.0% | |
| TGGAGTATAGTGAGATGGCA+TGG | - | chr2_2:21640906-21640925 | Msa0243910:CDS | 45.0% | |
| AGATGGCATGGTATTTGGCA+TGG | - | chr2_2:21640918-21640937 | Msa0243910:CDS | 45.0% | |
| ACTATATTGAGCCGATCAGG+CGG | + | chr2_2:21641179-21641198 | None:intergenic | 45.0% | |
| GAGACTATATTGAGCCGATC+AGG | + | chr2_2:21641182-21641201 | None:intergenic | 45.0% | |
| ! | GATCGGCTCAATATAGTCTC+GGG | - | chr2_2:21641182-21641201 | Msa0243910:intron | 45.0% |
| !! | TATGTCGTTGATTTCGCAGG+AGG | - | chr2_2:21641312-21641331 | Msa0243910:CDS | 45.0% |
| GTTTCGACTCTCATAGCTAC+AGG | - | chr2_2:21641478-21641497 | Msa0243910:CDS | 45.0% | |
| ! | TCAGCTGCATTTAGCTTACC+AGG | - | chr2_2:21641508-21641527 | Msa0243910:CDS | 45.0% |
| TGAAGACGAGATAAGTGCCA+TGG | + | chr2_2:21641608-21641627 | None:intergenic | 45.0% | |
| CATCCTTATCTCGCGATATG+CGG | - | chr2_2:21641651-21641670 | Msa0243910:CDS | 45.0% | |
| !! | GAAGTTGATATCCGGACTAG+TGG | - | chr2_2:21641702-21641721 | Msa0243910:CDS | 45.0% |
| CACAAATAACGCCACTAGTC+CGG | + | chr2_2:21641716-21641735 | None:intergenic | 45.0% | |
| !! | AAGGCATTGCGCCTATTTCA+TGG | - | chr2_2:21642026-21642045 | Msa0243910:CDS | 45.0% |
| !!! | AATAAATTTTATTGTTATTA+TGG | - | chr2_2:21641968-21641987 | Msa0243910:CDS | 5.0% |
| !!! | AATAAATTTTATTGTTATTA+TGG | - | chr2_2:21641968-21641987 | Msa0243910:CDS | 5.0% |
| ! | GGTTGCCCAGCCATTTGTTA+TGG | + | chr2_2:21640592-21640611 | None:intergenic | 50.0% |
| AACCGCACTCCATATTGCAG+CGG | - | chr2_2:21640608-21640627 | Msa0243910:CDS | 50.0% | |
| ! | GATTTGCTCCCGCTGCAATA+TGG | + | chr2_2:21640620-21640639 | None:intergenic | 50.0% |
| CCTTGTCCACCCCTAATTGA+TGG | + | chr2_2:21640792-21640811 | None:intergenic | 50.0% | |
| CCATCAATTAGGGGTGGACA+AGG | - | chr2_2:21640789-21640808 | Msa0243910:CDS | 50.0% | |
| GGTATTATCGCCGCAGAAGT+TGG | - | chr2_2:21640939-21640958 | Msa0243910:CDS | 50.0% | |
| CAATGTTAGCACCGCCTGAT+CGG | - | chr2_2:21641165-21641184 | Msa0243910:intron | 50.0% | |
| ! | GCTGCATTTAGCTTACCAGG+TGG | - | chr2_2:21641511-21641530 | Msa0243910:CDS | 50.0% |
| CGAGATAAGTGCCATGGAGT+CGG | + | chr2_2:21641602-21641621 | None:intergenic | 50.0% | |
| CGCATATCGCGAGATAAGGA+TGG | + | chr2_2:21641653-21641672 | None:intergenic | 50.0% | |
| ! | GGTTGCCCAGCCATTTGTTA+TGG | + | chr2_2:21640592-21640611 | None:intergenic | 50.0% |
| AACCGCACTCCATATTGCAG+CGG | - | chr2_2:21640608-21640627 | Msa0243910:CDS | 50.0% | |
| ! | GATTTGCTCCCGCTGCAATA+TGG | + | chr2_2:21640620-21640639 | None:intergenic | 50.0% |
| CCTTGTCCACCCCTAATTGA+TGG | + | chr2_2:21640792-21640811 | None:intergenic | 50.0% | |
| CCATCAATTAGGGGTGGACA+AGG | - | chr2_2:21640789-21640808 | Msa0243910:CDS | 50.0% | |
| GGTATTATCGCCGCAGAAGT+TGG | - | chr2_2:21640939-21640958 | Msa0243910:CDS | 50.0% | |
| CAATGTTAGCACCGCCTGAT+CGG | - | chr2_2:21641165-21641184 | Msa0243910:intron | 50.0% | |
| ! | GCTGCATTTAGCTTACCAGG+TGG | - | chr2_2:21641511-21641530 | Msa0243910:CDS | 50.0% |
| CGAGATAAGTGCCATGGAGT+CGG | + | chr2_2:21641602-21641621 | None:intergenic | 50.0% | |
| CGCATATCGCGAGATAAGGA+TGG | + | chr2_2:21641653-21641672 | None:intergenic | 50.0% | |
| ACCGCACTCCATATTGCAGC+GGG | - | chr2_2:21640609-21640628 | Msa0243910:CDS | 55.0% | |
| TCCCGCTGCAATATGGAGTG+CGG | + | chr2_2:21640613-21640632 | None:intergenic | 55.0% | |
| GCTCCGCATATCGCGAGATA+AGG | + | chr2_2:21641657-21641676 | None:intergenic | 55.0% | |
| ACCGCACTCCATATTGCAGC+GGG | - | chr2_2:21640609-21640628 | Msa0243910:CDS | 55.0% | |
| TCCCGCTGCAATATGGAGTG+CGG | + | chr2_2:21640613-21640632 | None:intergenic | 55.0% | |
| GCTCCGCATATCGCGAGATA+AGG | + | chr2_2:21641657-21641676 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 21640405 | 21642085 | 21640405 | ID=Msa0243910;Name=Msa0243910 |
| chr2_2 | mRNA | 21640405 | 21642085 | 21640405 | ID=Msa0243910-mRNA-1;Parent=Msa0243910;Name=Msa0243910-mRNA-1;_AED=0.39;_eAED=0.40;_QI=0|1|0.5|1|1|1|2|140|484 |
| chr2_2 | exon | 21640405 | 21641159 | 21640405 | ID=Msa0243910-mRNA-1:exon:8515;Parent=Msa0243910-mRNA-1 |
| chr2_2 | exon | 21641246 | 21642085 | 21641246 | ID=Msa0243910-mRNA-1:exon:8514;Parent=Msa0243910-mRNA-1 |
| chr2_2 | CDS | 21641246 | 21642085 | 21641246 | ID=Msa0243910-mRNA-1:cds;Parent=Msa0243910-mRNA-1 |
| chr2_2 | CDS | 21640545 | 21641159 | 21640545 | ID=Msa0243910-mRNA-1:cds;Parent=Msa0243910-mRNA-1 |
| chr2_2 | three_prime_UTR | 21640405 | 21640544 | 21640405 | ID=Msa0243910-mRNA-1:three_prime_utr;Parent=Msa0243910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
