AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0012780


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0012780 MtrunA17_Chr1g0161751 98.209 335 5 1 331 664 395 729 2.46e-140 451
Msa0012780 MtrunA17_Chr1g0161801 90.698 301 14 2 365 664 10 297 5.60e-98 323
Msa0012780 MtrunA17_Chr1g0161771 96.694 242 8 0 336 577 351 592 3.00e-95 324
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 574 sgRNAs with CRISPR-Local

Find 698 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAGGGGATGGTGAGGGTGG+TGG 0.192067 1_1:-19475887 Msa0012770:intron
TGGCCAGTTATGACCCCTTT+TGG 0.221232 1_1:-19475349 Msa0012770:three_prime_UTR
GGTGGATCCTTGTGTATATA+TGG 0.235774 1_1:-19475914 Msa0012770:intron
GTTCCTTGGTTTAGCTTTGT+AGG 0.236353 1_1:-19477194 Msa0012790:intron
GGAGGAGGTGATGGGGATGG+TGG 0.242335 1_1:-19478109 Msa0012790:intron
GGAGGAGGTGATGGGGATGG+TGG 0.242335 1_1:-19478253 Msa0012790:CDS
GGAGGAGGTGATGGGGATGG+TGG 0.242335 1_1:-19478397 Msa0012790:intron
GGGGATGGTGATGGTGGTGG+TGG 0.247464 1_1:-19478871 None:intergenic
GGAGGAGGTGATGGTGATGG+TGG 0.252233 1_1:-19477965 Msa0012790:CDS
GGAGGAGATGGGGATGGTGG+TGG 0.253955 1_1:-19478826 None:intergenic
GACTTTGACTATGTCAAATA+TGG 0.261331 1_1:+19477113 Msa0012780:CDS
GGGGAAGGTGAGGGTGGTGG+TGG 0.271395 1_1:-19475693 Msa0012770:CDS
GGAGGAGGGGATGGGGATGG+TGG 0.275632 1_1:-19478493 Msa0012790:CDS
GGAGGAGGGGATGGGGATGG+TGG 0.275632 1_1:-19478541 Msa0012790:CDS
GATGGTGGAGGTGACTTTAC+TGG 0.282118 1_1:-19479120 None:intergenic
TACAACCTCGTACTTGTCTT+TGG 0.283563 1_1:-19477234 Msa0012790:intron
GGGGATGGTGATGGTGGAGG+TGG 0.288232 1_1:-19478007 Msa0012790:CDS
GGGGATGGGGATGGTGGTGG+TGG 0.289253 1_1:-19478631 Msa0012790:CDS
TAGTAAGGTGTGTGGGGAAT+AGG 0.291722 1_1:-19476304 Msa0012790:intron
GAGGGGATGGTGAGGGTGGT+GGG 0.295383 1_1:-19475886 Msa0012770:intron
GGAGGGGATGGGGATGGTGG+TGG 0.296250 1_1:-19478634 Msa0012790:CDS
GGAGGAGATTTGTAATAGTA+TGG 0.296797 1_1:-19478757 None:intergenic
GGAGGGGATGGGGATGGTGG+AGG 0.300738 1_1:-19478490 Msa0012790:CDS
GGAGGGGATGGGGATGGTGG+AGG 0.300738 1_1:-19478538 Msa0012790:CDS
GGATGGTGATGGTGGAGGTG+GGG 0.301341 1_1:-19478005 Msa0012790:CDS
GGTGGAGGAGATGGGGATGG+TGG 0.303146 1_1:-19478829 None:intergenic
GGTGGGGAAGGTGAGGGTGG+TGG 0.306460 1_1:-19475696 Msa0012770:CDS
TAGTAAGGTGTATGGGGAAT+AGG 0.306917 1_1:-19476064 None:intergenic
GGAGGAGGGGATGGGGATGG+TGG 0.308323 1_1:-19478637 Msa0012790:CDS
GGTGGGGATGGTGATGGTGG+TGG 0.308338 1_1:-19478874 None:intergenic
GGCGGTGATGGTGAGGGAGG+TGG 0.310458 1_1:-19478922 None:intergenic
GGAGGTGATGGGGATGGTGG+GGG 0.315570 1_1:-19478106 Msa0012790:intron
GGAGGTGATGGGGATGGTGG+GGG 0.315570 1_1:-19478250 Msa0012790:CDS
GGAGGTGATGGGGATGGTGG+GGG 0.315570 1_1:-19478394 Msa0012790:CDS
GGAGGAGATTTATAATAGTA+TGG 0.317641 1_1:-19476031 Msa0012770:CDS
GGAGGGGATGGTGATGGTGG+AGG 0.319478 1_1:-19478010 Msa0012790:CDS
GGAGGGGATGGTGATGGTGG+AGG 0.319478 1_1:-19478154 Msa0012790:intron
GGAGGGGATGGTGATGGTGG+AGG 0.319478 1_1:-19478298 Msa0012790:CDS
GGAGATGGTGAAGGTGGTGG+TGG 0.320320 1_1:-19475953 Msa0012770:CDS
GGTGGAGGGGATGGTGAGGG+TGG 0.321037 1_1:-19475890 Msa0012770:intron
AGGAGGTGATGGGGATGGTG+GGG 0.322569 1_1:-19478107 Msa0012790:intron
AGGAGGTGATGGGGATGGTG+GGG 0.322569 1_1:-19478251 Msa0012790:CDS
AGGAGGTGATGGGGATGGTG+GGG 0.322569 1_1:-19478395 Msa0012790:CDS
GGAGGAGAGTTGTAATAGTA+TGG 0.323288 1_1:-19476364 Msa0012790:intron
GGAGGTGATGGTGATGGTGG+GGG 0.324331 1_1:-19477962 Msa0012790:CDS
GGAGGTGACTTGTAGGTATA+TGG 0.324438 1_1:-19477812 Msa0012790:CDS
GGAATAGGAGATGGAGGAGG+AGG 0.324838 1_1:-19476193 Msa0012790:intron
GGTGATGGAGATGGTGGTGG+TGG 0.327891 1_1:-19475837 Msa0012770:intron
GGTGGGGAAGGCGAGGGTGG+TGG 0.328631 1_1:-19475648 Msa0012770:CDS
GGTGGTGGTGATGGTGATGG+TGG 0.331198 1_1:-19478781 None:intergenic
GGGGAAGGCGAGGGTGGTGG+TGG 0.331259 1_1:-19475645 Msa0012770:CDS
GGAGGAGATTTGTAATAATA+AGG 0.335172 1_1:-19478037 Msa0012790:CDS
GGAGGAGATTTGTAATAATA+AGG 0.335172 1_1:-19478181 Msa0012790:CDS
GGAGGAGATTTGTAATAATA+AGG 0.335172 1_1:-19478325 Msa0012790:CDS
GGTGGAGGTGACGGGGATGG+AGG 0.337400 1_1:-19475534 Msa0012770:three_prime_UTR
TAGTAAGGTGTATGGGGAAT+AGG 0.337420 1_1:-19476208 Msa0012790:intron
GAGGAGGTGATGGGGATGGT+GGG 0.339002 1_1:-19478108 Msa0012790:intron
GAGGAGGTGATGGGGATGGT+GGG 0.339002 1_1:-19478252 Msa0012790:CDS
GAGGAGGTGATGGGGATGGT+GGG 0.339002 1_1:-19478396 Msa0012790:CDS
GGTGGTGACTTATAGTAATA+AGG 0.339106 1_1:-19478709 None:intergenic
GGAGGTGACGGGGATGGAGG+AGG 0.341597 1_1:-19475531 Msa0012770:three_prime_UTR
AGCAAAATCGTCAAGGCTTA+TGG 0.345091 1_1:+19477050 Msa0012780:CDS
TGGAGGTGATTTGTAATAGT+AGG 0.345099 1_1:-19478902 None:intergenic
GGAGGGGATGGCGACGGTGG+GGG 0.345680 1_1:-19478730 None:intergenic
GGTGGAGACTTATAATAGTA+TGG 0.345706 1_1:-19478133 Msa0012790:intron
GGTGGAGACTTATAATAGTA+TGG 0.345706 1_1:-19478277 Msa0012790:CDS
GGTGGAGACTTATAATAGTA+TGG 0.345706 1_1:-19478421 Msa0012790:intron
GGGGATGGGGATGGTGGAGG+TGG 0.345825 1_1:-19478487 Msa0012790:CDS
GGGGATGGGGATGGTGGAGG+TGG 0.345825 1_1:-19478535 Msa0012790:CDS
TAGTAGGGAGGATGAGAAAT+GGG 0.346053 1_1:-19479030 None:intergenic
GGGATGGTGATGGTGGAGGT+GGG 0.348056 1_1:-19478006 Msa0012790:CDS
GGGGATGGTGATGGTGGAGG+TGG 0.350036 1_1:-19478151 Msa0012790:intron
GGGGATGGTGATGGTGGAGG+TGG 0.350036 1_1:-19478295 Msa0012790:CDS
GGAGACGGCGATGGTGGTGG+AGG 0.350675 1_1:-19479063 None:intergenic
AGGGGATGGTGAGGGTGGTG+GGG 0.351029 1_1:-19475885 Msa0012770:intron
GGTGAAGGAGTTGGTGGTGG+TGG 0.352365 1_1:-19475597 Msa0012770:three_prime_UTR
TGGAGGGTGTACAATCTCTT+TGG 0.356704 1_1:-19478065 Msa0012790:CDS
TGGAGGGTGTACAATCTCTT+TGG 0.356704 1_1:-19478209 Msa0012790:CDS
TGGAGGGTGTACAATCTCTT+TGG 0.356704 1_1:-19478353 Msa0012790:CDS
AATATGGCGGTGAATAATAA+TGG 0.357597 1_1:-19477400 Msa0012790:CDS
GGTGGTGATGGTGATGGTGG+TGG 0.358061 1_1:-19478778 None:intergenic
GAGGAGGTGATGGTGATGGT+GGG 0.360725 1_1:-19477964 Msa0012790:CDS
TAGCTTTGTAGGTATGTTGA+AGG 0.366005 1_1:-19477183 Msa0012790:intron
GGTGGTGGGGAAGGCGAGGG+TGG 0.366503 1_1:-19475651 Msa0012770:CDS
GGTGACGGGGATGGAGGAGG+TGG 0.368730 1_1:-19475528 Msa0012770:three_prime_UTR
TGCCCTTTATGCTCCACCTA+AGG 0.371622 1_1:+19477154 Msa0012780:CDS
TGTATGGAGGTGAGTAATAA+TGG 0.371710 1_1:-19477664 Msa0012790:CDS
GGTGGAGGAGATGGTGAAGG+GGG 0.372665 1_1:-19476007 Msa0012770:CDS
GGTGGAGGAGATGGTGAAGG+GGG 0.372665 1_1:-19476103 Msa0012790:CDS
TGGGGAGACTTGTAGTAATA+TGG 0.374714 1_1:-19475867 Msa0012770:intron
TATATGGAGGTGAATAATAA+TGG 0.376305 1_1:-19477796 Msa0012790:CDS
GTAGTAGGGAGGATGAGAAA+TGG 0.376648 1_1:-19479031 None:intergenic
GGAGGAGGGGATGGTGATGG+TGG 0.378580 1_1:-19478013 Msa0012790:CDS
GGAGGAGGGGATGGTGATGG+TGG 0.378580 1_1:-19478157 Msa0012790:intron
GGAGGAGGGGATGGTGATGG+TGG 0.378580 1_1:-19478301 Msa0012790:CDS
GGAGGAAGGACCTTGGGTGG+TGG 0.385652 1_1:-19476340 Msa0012790:intron
TGTATGGAGGTGAATAATAA+TGG 0.386176 1_1:-19477532 Msa0012790:CDS
GGAGATGGGGATGGTGGTGG+AGG 0.386790 1_1:-19478823 None:intergenic
GGTGGAGATTTGTAGTAATA+GGG 0.387275 1_1:-19478853 None:intergenic
GCCCCAAAAGGGGTCATAAC+TGG 0.387754 1_1:+19475346 Msa0012780:CDS
GGAGGTGATTTATAGTAGTA+AGG 0.387763 1_1:-19477728 Msa0012790:CDS
GGTGGCGGTGATGGTGAGGG+AGG 0.389011 1_1:-19478925 None:intergenic
AATAGGAGATGGAGGAGGAG+GGG 0.390791 1_1:-19476191 Msa0012790:intron
GGTGATGGTGATGGTGGTGG+AGG 0.391801 1_1:-19478775 None:intergenic
GGAGTTGGTGCTGCTTTCAC+AGG 0.392052 1_1:-19477575 Msa0012790:intron
GGAGGTGATTTGTAGTAGTA+AGG 0.393410 1_1:-19477596 Msa0012790:intron
AACCCTTAGGTGGAGCATAA+AGG 0.394456 1_1:-19477157 Msa0012790:intron
GGAGGAGATGGTGAAGGTGG+TGG 0.394944 1_1:-19475956 Msa0012770:CDS
GGAGGGTGTACAATCTCTTT+GGG 0.396323 1_1:-19478064 Msa0012790:CDS
GGAGGGTGTACAATCTCTTT+GGG 0.396323 1_1:-19478208 Msa0012790:CDS
GGAGGGTGTACAATCTCTTT+GGG 0.396323 1_1:-19478352 Msa0012790:CDS
GGTGGTGACTTATAGTAGTA+TGG 0.396728 1_1:-19478517 Msa0012790:CDS
GGTGGTGACTTGTAGTAGTA+TGG 0.398170 1_1:-19477941 Msa0012790:CDS
TGGTGGAGATTTGTAGTAAT+AGG 0.401340 1_1:-19478854 None:intergenic
GGAATAGGAGATGGAGGAGG+AGG 0.402011 1_1:-19476049 None:intergenic
GGTGGAGATGGTGATGGTGG+AGG 0.402758 1_1:-19478442 Msa0012790:CDS
TGATAAGGAGGTGGTGGAGA+TGG 0.403867 1_1:-19478982 None:intergenic
GGTGAAGGTGACGGTGGTGG+TGG 0.405177 1_1:-19475480 Msa0012770:three_prime_UTR
GTATGGTGGAGGAGGGGATG+GGG 0.405333 1_1:-19478500 Msa0012790:CDS
GTATGGTGGAGGAGGGGATG+GGG 0.405333 1_1:-19478548 Msa0012790:CDS
GTATGGTGGAGGAGGGGATG+GGG 0.405333 1_1:-19478644 Msa0012790:CDS
GGAGATGGTGATGGTGGAGG+TGG 0.406810 1_1:-19478439 Msa0012790:CDS
GGAGTTGGTGCCGCTTTCAC+AGG 0.408138 1_1:-19477443 Msa0012790:CDS
GGAGTTGGTGCCGCTTTCAC+AGG 0.408138 1_1:-19477707 Msa0012790:CDS
GGAGTTGGTGCCGCTTTCAC+AGG 0.408138 1_1:-19477836 Msa0012790:CDS
GGAGGGGATTTGTAGTAGTA+TGG 0.410368 1_1:-19476175 Msa0012790:CDS
GGAGGAGATTTGTAGTAGTA+TGG 0.410368 1_1:-19476271 Msa0012790:CDS
AGTATGGAGGAGAATAATAA+TGG 0.412319 1_1:-19477925 Msa0012790:CDS
GGAGGTGATTTGTAGTAGTA+AGG 0.412669 1_1:-19477857 Msa0012790:intron
GGAGGAGACGGCGATGGTGG+TGG 0.413011 1_1:-19479066 None:intergenic
TGGAGGTGGTGGGGAAGGCG+AGG 0.413467 1_1:-19475655 Msa0012770:CDS
AGGAGGTGATGGTGATGGTG+GGG 0.416656 1_1:-19477963 Msa0012790:CDS
GGAGGAGATGGTGAAGGTGG+TGG 0.417778 1_1:-19476244 Msa0012790:CDS
TAGTATGGTGGAGGAGGTGA+TGG 0.417972 1_1:-19478118 Msa0012790:intron
TAGTATGGTGGAGGAGGTGA+TGG 0.417972 1_1:-19478262 Msa0012790:CDS
TAGTATGGTGGAGGAGGTGA+TGG 0.417972 1_1:-19478406 Msa0012790:intron
GGTGGGGATTTGTAATAGTA+TGG 0.418860 1_1:-19475935 Msa0012770:intron
GGGAGGGGATGGCGACGGTG+GGG 0.418900 1_1:-19478731 None:intergenic
TGTACAATCTCTTTGGGTGG+GGG 0.419024 1_1:-19478058 Msa0012790:CDS
TGTACAATCTCTTTGGGTGG+GGG 0.419024 1_1:-19478202 Msa0012790:CDS
TGTACAATCTCTTTGGGTGG+GGG 0.419024 1_1:-19478346 Msa0012790:CDS
TAGTATGGTGGAGGAGGGGA+TGG 0.420788 1_1:-19478502 Msa0012790:CDS
TAGTATGGTGGAGGAGGGGA+TGG 0.420788 1_1:-19478550 Msa0012790:CDS
TAGTATGGTGGAGGAGGGGA+TGG 0.420788 1_1:-19478646 None:intergenic
GGTGGTGACTTATAATAGTA+TGG 0.421133 1_1:-19478085 Msa0012790:CDS
CATATGGTGGTGGAGGTGAC+GGG 0.421446 1_1:-19475542 Msa0012770:three_prime_UTR
ATTTGTAGTAGTAAGGTGTA+TGG 0.421831 1_1:-19476072 Msa0012790:CDS
ACTTGTAATAGTAAGGTGTA+TGG 0.421831 1_1:-19476216 Msa0012790:intron
TTCTTGTTATGTGACTTTGC+AGG 0.422500 1_1:-19476487 Msa0012790:intron
GGTGGTGATTTGTAAACATA+AGG 0.422684 1_1:-19475510 Msa0012770:three_prime_UTR
GCAGGAGCCTTGTGCTCATA+TGG 0.423473 1_1:-19475558 Msa0012770:three_prime_UTR
TGGAGGTGATTTGTAATAGT+AGG 0.424827 1_1:-19478806 None:intergenic
TAATAATGGACCGGTGGAGG+TGG 0.425156 1_1:-19477518 Msa0012790:CDS
TGGTGGTAGGGATGTGGGTG+AGG 0.425459 1_1:-19476403 Msa0012790:intron
GTGGATCCTTGTGTATATAT+GGG 0.426916 1_1:-19475913 Msa0012770:intron
GGGGAGGGGATGGCGACGGT+GGG 0.430213 1_1:-19478732 None:intergenic
GGAGGTGGTGGTGATGGTGA+TGG 0.431237 1_1:-19478784 None:intergenic
GTGTGGGGAATAGGAGATGG+AGG 0.432123 1_1:-19476295 Msa0012790:intron
GGAGATGGTGAAGGTGGTGG+AGG 0.432278 1_1:-19476241 Msa0012790:CDS
TTGTAAACCGGTGCCGGTGG+GGG 0.433379 1_1:-19477485 Msa0012790:CDS
GGTGGTGACTTATAGTAGTA+TGG 0.434186 1_1:-19478229 Msa0012790:CDS
GGTGGTGACTTATAGTAGTA+TGG 0.434186 1_1:-19478373 Msa0012790:CDS
GGAGATGGTGATGGAGGAGG+TGG 0.435014 1_1:-19478583 Msa0012790:CDS
TCATATGGTGGTGGAGGTGA+CGG 0.435268 1_1:-19475543 Msa0012770:three_prime_UTR
TTGTAAACCGGTGCGGGTGG+TGG 0.436661 1_1:-19477878 Msa0012790:CDS
TTGTAAACCGGTGAGGGAGG+TGG 0.439722 1_1:-19477353 Msa0012790:CDS
GGTGGTGACTTGTAATAGTA+TGG 0.440365 1_1:-19478469 Msa0012790:CDS
GGAGGACTTTGATAGTGATA+AGG 0.440953 1_1:-19478997 None:intergenic
TGAGGATATGCAACGGGTGG+AGG 0.440976 1_1:-19476385 Msa0012790:intron
CTTGTAAACCGGTGCCGGTG+GGG 0.441636 1_1:-19477486 Msa0012790:CDS
TGAGAAATGGGAGATGGTGG+AGG 0.442147 1_1:-19479018 None:intergenic
GGTGATGGTGAGGGAGGTGG+AGG 0.442489 1_1:-19478919 None:intergenic
AGGAGGTGGCGGTGATGGTG+AGG 0.442685 1_1:-19478929 None:intergenic
GGTGGTGAAGGTGACGGTGG+TGG 0.442854 1_1:-19475483 Msa0012770:three_prime_UTR
GGTGGAGGAGGGGATGGGGA+TGG 0.443528 1_1:-19478496 Msa0012790:CDS
GGTGGAGGAGGGGATGGGGA+TGG 0.443528 1_1:-19478544 Msa0012790:CDS
GGTGGAGGAGGGGATGGGGA+TGG 0.443528 1_1:-19478640 Msa0012790:CDS
ATATGGTTCCACGGTGTGTA+AGG 0.444106 1_1:+19477130 Msa0012780:CDS
GACTCTTGTAGTAGTATGGT+GGG 0.445360 1_1:-19475719 Msa0012770:intron
GGTGGGGACTTGTAGTAGTA+TGG 0.445864 1_1:-19477989 Msa0012790:CDS
GGTGGGGACTTGTAATAGTA+TGG 0.446153 1_1:-19478661 None:intergenic
GGAGGACTCTTGTAGTAGTA+TGG 0.446693 1_1:-19475723 Msa0012770:intron
GAGGTGGTGGAGATGGAGAT+GGG 0.447877 1_1:-19478975 None:intergenic
GGGTGTACAATCTCTTTGGG+TGG 0.449656 1_1:-19478061 Msa0012790:CDS
GGGTGTACAATCTCTTTGGG+TGG 0.449656 1_1:-19478205 Msa0012790:CDS
GGGTGTACAATCTCTTTGGG+TGG 0.449656 1_1:-19478349 Msa0012790:CDS
GATTTATAGTAGTAAGGAGT+TGG 0.450720 1_1:-19477722 Msa0012790:CDS
GGAGGAGACTTGTAATAGTA+AGG 0.451641 1_1:-19476223 Msa0012790:intron
GGTGGTGGAGATGGTGATGG+TGG 0.452040 1_1:-19478445 Msa0012790:CDS
TTCTTTGAAGCATAGGCAAA+TGG 0.452064 1_1:-19477269 Msa0012790:intron
GGAGGATGTGATATTTCCTT+AGG 0.452254 1_1:-19478688 None:intergenic
GAATAGGAGATGGAGGAGGA+GGG 0.452612 1_1:-19476192 Msa0012790:intron
TCAAGTACAAGTTTGTTCCT+TGG 0.454362 1_1:-19477208 Msa0012790:intron
GGTGGAGAAGATGGTGAAGG+GGG 0.454962 1_1:-19476151 Msa0012790:CDS
GGAGGTGATTTGTAGTAGTA+AGG 0.455532 1_1:-19477464 Msa0012790:CDS
GGTGGTGGAGATGGAGATGG+GGG 0.456612 1_1:-19478973 None:intergenic
GGAAGGACCTTGGGTGGTGG+TGG 0.456847 1_1:-19476337 Msa0012790:intron
TAAGGAGTTGGTGAAGGCTT+AGG 0.457503 1_1:-19477314 Msa0012790:intron
ACCCTTAGGTGGAGCATAAA+GGG 0.457699 1_1:-19477156 Msa0012790:intron
GGTGGGGACTTATAGTAGTA+TGG 0.458419 1_1:-19478565 Msa0012790:CDS
TTGTAGTAGTATGGTGGTGG+AGG 0.460638 1_1:-19476262 Msa0012790:CDS
GGTGGTGAAGGAGTTGGTGG+TGG 0.461054 1_1:-19475600 Msa0012770:three_prime_UTR
GCCACCAATGGCAATGGCAT+TGG 0.462569 1_1:+19475368 Msa0012780:CDS
TTGTAATAGTATGGTGGAGG+AGG 0.463739 1_1:-19478652 None:intergenic
TTATAGTAGTATGGTGGTGG+AGG 0.463938 1_1:-19476118 Msa0012790:CDS
GGTGGTGGTGAAGGAGTTGG+TGG 0.464276 1_1:-19475603 Msa0012770:three_prime_UTR
CTAAGGCCAGTAGCCCCAAA+AGG 0.464699 1_1:+19475334 Msa0012780:CDS
GCTACTGGCCTTAGCAGTCA+TGG 0.465006 1_1:-19475325 Msa0012770:three_prime_UTR
TTGTAATAATAAGGTGGAGG+AGG 0.465296 1_1:-19478028 Msa0012790:CDS
TTGTAATAATAAGGTGGAGG+AGG 0.465296 1_1:-19478172 Msa0012790:CDS
TTGTAATAATAAGGTGGAGG+AGG 0.465296 1_1:-19478316 Msa0012790:CDS
TATGGTGGAGGAAGGACCTT+GGG 0.466179 1_1:-19476346 Msa0012790:intron
TGGAGGGGATTTGTAGTAGT+AGG 0.468423 1_1:-19479046 None:intergenic
AGTGGAGATGGTGATGGAGG+AGG 0.470539 1_1:-19478586 Msa0012790:CDS
TTGTAAACTGGTGCGGGAGG+TGG 0.470642 1_1:-19477749 Msa0012790:CDS
AATGAGTGGTGGTAGGGATG+TGG 0.470737 1_1:-19476409 Msa0012790:intron
GAGATGGTGAAGGTGGTGGT+GGG 0.472122 1_1:-19475952 Msa0012770:CDS
GCCCTTTATGCTCCACCTAA+GGG 0.472561 1_1:+19477155 Msa0012780:CDS
GATTTGTAGTAGTAAGGAGT+TGG 0.473763 1_1:-19477458 Msa0012790:CDS
GATTTGTAGTAGTAAGGAGT+TGG 0.473763 1_1:-19477590 Msa0012790:intron
GATTTGTAGTAGTAAGGAGT+TGG 0.473763 1_1:-19477851 Msa0012790:intron
GTGGTGGAGGAGATGGTGAA+GGG 0.474012 1_1:-19476009 Msa0012770:CDS
GTGGTGGAGGAGATGGTGAA+GGG 0.474012 1_1:-19476105 Msa0012790:CDS
GGAGGTGGTGGAGATGGAGA+TGG 0.474428 1_1:-19478976 None:intergenic
GGAGGTGACTTTACTGGTGG+GGG 0.474728 1_1:-19479114 None:intergenic
AGGTGGTGGAGATGGAGATG+GGG 0.476047 1_1:-19478974 None:intergenic
TTATAGTAGTATGGTGGAGG+AGG 0.476962 1_1:-19478556 Msa0012790:CDS
GGAGGTGATTTGTAATAGTA+GGG 0.477336 1_1:-19478901 None:intergenic
GGTGGTGGTGGAGATGGTGA+TGG 0.477648 1_1:-19478448 Msa0012790:CDS
GGTGTACAATCTCTTTGGGT+GGG 0.478496 1_1:-19478060 Msa0012790:CDS
GGTGTACAATCTCTTTGGGT+GGG 0.478496 1_1:-19478204 Msa0012790:CDS
GGTGTACAATCTCTTTGGGT+GGG 0.478496 1_1:-19478348 Msa0012790:CDS
GGTGAGCTGTACTTGTAAAC+TGG 0.478518 1_1:-19477761 Msa0012790:CDS
TGATAGTGATAAGGAGGTGG+TGG 0.479528 1_1:-19478988 None:intergenic
GGTGGAGGAGATGGTGAAGG+TGG 0.479743 1_1:-19475959 Msa0012770:CDS
GGTGGAGGAGATGGTGAAGG+TGG 0.479743 1_1:-19476247 Msa0012790:CDS
TGGTGGAGGAGATGGTGAAG+GGG 0.480349 1_1:-19476008 Msa0012770:CDS
TGGTGGAGGAGATGGTGAAG+GGG 0.480349 1_1:-19476104 Msa0012790:CDS
TTTGTAGTAGTAAGGTGTAT+GGG 0.480729 1_1:-19476071 Msa0012790:CDS
TTGTAAACTGGTGCTGGAGG+TGG 0.481641 1_1:-19477617 Msa0012790:CDS
TAAACCGGTGCGGGTGGTGG+AGG 0.481763 1_1:-19477875 Msa0012790:intron
TAGTAAGGAGGTGGCGGTGA+TGG 0.481806 1_1:-19478934 None:intergenic
TAATAAGGTGGAGGAGGGGA+TGG 0.482124 1_1:-19478022 Msa0012790:CDS
TAATAAGGTGGAGGAGGGGA+TGG 0.482124 1_1:-19478166 Msa0012790:intron
TAATAAGGTGGAGGAGGGGA+TGG 0.482124 1_1:-19478310 Msa0012790:CDS
GGTGGTGGAGGTGACGGGGA+TGG 0.482624 1_1:-19475537 Msa0012770:three_prime_UTR
GGTGGAGGAGGTGATGGTGA+TGG 0.482865 1_1:-19477968 Msa0012790:CDS
TACTTGTAAACCGGTGCCGG+TGG 0.484706 1_1:-19477488 Msa0012790:CDS
GGTGGAGGAGGTGATGGGGA+TGG 0.485680 1_1:-19478112 Msa0012790:intron
GGTGGAGGAGGTGATGGGGA+TGG 0.485680 1_1:-19478256 Msa0012790:CDS
GGTGGAGGAGGTGATGGGGA+TGG 0.485680 1_1:-19478400 Msa0012790:intron
GGATGAGAAATGGGAGATGG+TGG 0.486905 1_1:-19479021 None:intergenic
CTTGTAGTAGTAAGGTGTGT+GGG 0.487486 1_1:-19476311 Msa0012790:intron
TAATAATGGACCGGTGGAGG+TGG 0.487767 1_1:-19477650 Msa0012790:CDS
GAATAATAATGGACGGGTGG+TGG 0.490254 1_1:-19477389 Msa0012790:CDS
ACATAAGGAGGTGGTGGTGA+AGG 0.491896 1_1:-19475495 Msa0012770:three_prime_UTR
TAGTAAGGTGGTAGTGGAGA+TGG 0.492120 1_1:-19478598 Msa0012790:CDS
TGTAATAATAAGGTGGAGGA+GGG 0.492688 1_1:-19478027 Msa0012790:CDS
TGTAATAATAAGGTGGAGGA+GGG 0.492688 1_1:-19478171 Msa0012790:CDS
TGTAATAATAAGGTGGAGGA+GGG 0.492688 1_1:-19478315 Msa0012790:CDS
CTTGTAATAGTAAGGTGTAT+GGG 0.493907 1_1:-19476215 Msa0012790:intron
TTGTACTTGTAAACTGGTGC+TGG 0.494395 1_1:-19477623 Msa0012790:CDS
GGTGGTGACTTATAATAGTA+AGG 0.494987 1_1:-19478613 Msa0012790:CDS
ATATTTCCTTAGGTGGAGGT+GGG 0.496049 1_1:-19478678 None:intergenic
GAGTTGTAATAGTATGGTGG+AGG 0.496703 1_1:-19476358 Msa0012790:intron
TAAACTGGTGCGGGAGGTGG+AGG 0.496954 1_1:-19477746 Msa0012790:CDS
TGTAAACCGGTGAGGGAGGT+GGG 0.498778 1_1:-19477352 Msa0012790:CDS
GAAATGTTTCTTTGAAGCAT+AGG 0.500736 1_1:-19477276 Msa0012790:intron
TTATAATAGTAAGGTGGTAG+TGG 0.500970 1_1:-19478604 Msa0012790:CDS
GGTGGTGACTTGTACACATA+TGG 0.501996 1_1:-19475675 Msa0012770:CDS
GACTTATAGTAGTATGGTGG+AGG 0.503081 1_1:-19478511 Msa0012790:CDS
GACTTGTAGTAATATGGAGG+TGG 0.503462 1_1:-19475861 Msa0012770:intron
TTGTAGTAGTATGGTGGTGG+AGG 0.503501 1_1:-19475974 Msa0012770:CDS
ATGAGTGGTGGTAGGGATGT+GGG 0.503562 1_1:-19476408 Msa0012790:intron
GAGACGGCGATGGTGGTGGA+GGG 0.503567 1_1:-19479062 None:intergenic
GTGGTGGAGAAGATGGTGAA+GGG 0.503863 1_1:-19476153 Msa0012790:CDS
GGAGGTGGTGGGGAAGGCGA+GGG 0.504158 1_1:-19475654 Msa0012770:CDS
GATTTGTAGTAGTAAGGAGT+TGG 0.504266 1_1:-19477326 Msa0012790:intron
ACATATGGAGGTGGTGGGGA+AGG 0.505120 1_1:-19475660 Msa0012770:CDS
GATTTATAATAGTATGGTGG+TGG 0.505152 1_1:-19476025 Msa0012770:CDS
CTTTCTACCCATGACTGCTA+AGG 0.505874 1_1:+19475317 None:intergenic
GACTTATAATAGTATGGTGG+AGG 0.506656 1_1:-19478127 Msa0012790:intron
GACTTATAATAGTATGGTGG+AGG 0.506656 1_1:-19478271 Msa0012790:CDS
GACTTATAATAGTATGGTGG+AGG 0.506656 1_1:-19478415 Msa0012790:intron
GTTGGTGCTGCTTTCACAGG+GGG 0.506919 1_1:-19477572 Msa0012790:intron
TTATAGTAGTATGGTGGAGG+AGG 0.507137 1_1:-19478508 Msa0012790:CDS
GGAGGTGATTTGTAATAGTA+GGG 0.507840 1_1:-19478805 None:intergenic
GATTTATAGTAGTATGGTGG+TGG 0.508530 1_1:-19476121 Msa0012790:CDS
GATATTTCCTTAGGTGGAGG+TGG 0.509117 1_1:-19478679 None:intergenic
TAGTAGTAAGGAGTTGGTGA+AGG 0.509740 1_1:-19477320 Msa0012790:intron
GAATAATAATGGACCGGTGG+AGG 0.510072 1_1:-19477914 Msa0012790:CDS
AGATGGTGAAGGTGGTGGTG+GGG 0.510415 1_1:-19475951 Msa0012770:CDS
GGTGGTGGAGGAGATGGTGA+AGG 0.511492 1_1:-19476010 Msa0012770:CDS
GGTGGTGGAGGAGATGGTGA+AGG 0.511492 1_1:-19476106 Msa0012790:CDS
AGACGGCGATGGTGGTGGAG+GGG 0.511734 1_1:-19479061 None:intergenic
TAAACTGGTGCTGGAGGTGG+AGG 0.513913 1_1:-19477614 Msa0012790:intron
AAAGTATGCCATCACAGTTA+AGG 0.513967 1_1:+19477091 Msa0012780:CDS
TGTGGGTGAGGATATGCAAC+GGG 0.514156 1_1:-19476391 Msa0012790:intron
TAGTTGTAGTGAGGTGGTGG+TGG 0.515192 1_1:-19479162 None:intergenic
GAGATGGTGATGGAGGAGGT+GGG 0.516046 1_1:-19478582 Msa0012790:CDS
GAATAATAATGGACCGGTGG+AGG 0.516119 1_1:-19477521 Msa0012790:CDS
TAATAATGGACCGGTGGAGG+TGG 0.516755 1_1:-19477911 Msa0012790:CDS
ACATAAGGAGGTGGTGGTGA+AGG 0.517261 1_1:-19475612 Msa0012770:exon
AGTATGGTGGAGGAGGGGAT+GGG 0.517423 1_1:-19478501 Msa0012790:CDS
AGTATGGTGGAGGAGGGGAT+GGG 0.517423 1_1:-19478549 Msa0012790:CDS
AGTATGGTGGAGGAGGGGAT+GGG 0.517423 1_1:-19478645 Msa0012790:CDS
AGATGGTGATGGAGGAGGTG+GGG 0.517650 1_1:-19478581 Msa0012790:CDS
TAGTAGGGAGGTGGTGGTGA+TGG 0.518126 1_1:-19478790 None:intergenic
GAGTAATAATGGACCGGTGG+AGG 0.518415 1_1:-19477653 Msa0012790:CDS
GTGTACAATCTCTTTGGGTG+GGG 0.518941 1_1:-19478059 Msa0012790:CDS
GTGTACAATCTCTTTGGGTG+GGG 0.518941 1_1:-19478203 Msa0012790:CDS
GTGTACAATCTCTTTGGGTG+GGG 0.518941 1_1:-19478347 Msa0012790:CDS
AATAATGGACCGGTGGAGGT+GGG 0.519323 1_1:-19477517 Msa0012790:CDS
TAAGGCCAGTAGCCCCAAAA+GGG 0.519856 1_1:+19475335 Msa0012780:CDS
GGAGGTGACTTATAGGTGTA+TGG 0.520757 1_1:-19477548 Msa0012790:CDS
GGAGGTGACTTATAGGTGTA+TGG 0.520757 1_1:-19477680 Msa0012790:CDS
GGATATGCAACGGGTGGAGG+AGG 0.521099 1_1:-19476382 Msa0012790:intron
GGTAGTGGAGATGGTGATGG+AGG 0.521205 1_1:-19478589 Msa0012790:CDS
GAGATTTGTAATAGTATGGA+GGG 0.521314 1_1:-19478753 None:intergenic
TAAGCTTAGTTGTAGTGAGG+TGG 0.521342 1_1:-19479168 None:intergenic
TAGTATGGTGGTGGAGGAGA+TGG 0.521386 1_1:-19476016 Msa0012770:CDS
GGTGACTTATAATAGTATGG+AGG 0.521936 1_1:-19478082 Msa0012790:CDS
TAATAATGGACGGGTGGTGG+TGG 0.523004 1_1:-19477386 Msa0012790:CDS
GGAGGTGGTGGTGAAGGAGT+TGG 0.523175 1_1:-19475606 Msa0012770:three_prime_UTR
ACAGCTTCAGATGCTATGAC+TGG 0.524453 1_1:+19476458 Msa0012780:CDS
GGTGGAGGAGACGGCGATGG+TGG 0.524731 1_1:-19479069 None:intergenic
TGGATCCTTGTGTATATATG+GGG 0.524777 1_1:-19475912 Msa0012770:intron
TATAGTAGTATGGTGGAGGA+GGG 0.524797 1_1:-19478507 Msa0012790:CDS
TATAGTAGTATGGTGGAGGA+GGG 0.524797 1_1:-19478555 Msa0012790:CDS
TTGAGGTGACATGCAAAGCC+GGG 0.524845 1_1:+19477027 Msa0012780:CDS
GACTTGTAGTAGTATGGTGG+TGG 0.525053 1_1:-19475977 Msa0012770:CDS
GTTGGTGCCGCTTTCACAGG+GGG 0.525819 1_1:-19477440 Msa0012790:CDS
GTTGGTGCCGCTTTCACAGG+GGG 0.525819 1_1:-19477704 Msa0012790:CDS
GTTGGTGCCGCTTTCACAGG+GGG 0.525819 1_1:-19477833 Msa0012790:CDS
CAAGTCCCCACCTCCACCTA+AGG 0.526773 1_1:+19478672 Msa0012780:CDS
GGGGAGTTGTACTTGTAAAC+CGG 0.527273 1_1:-19477497 Msa0012790:CDS
ATCACCTCCACCACCCGCAC+CGG 0.527528 1_1:+19477871 Msa0012780:CDS
GGAGGTGGCGGTGATGGTGA+GGG 0.527558 1_1:-19478928 None:intergenic
GTTGAGGTGACATGCAAAGC+CGG 0.527925 1_1:+19477026 Msa0012780:CDS
CTGTACTTGTAAACTGGTGC+GGG 0.528129 1_1:-19477755 Msa0012790:CDS
TAAACCGGTGAGGGAGGTGG+GGG 0.528803 1_1:-19477350 Msa0012790:CDS
TTATAATAGTATGGTGGTGG+AGG 0.528969 1_1:-19476022 Msa0012770:CDS
GTAAACCGGTGAGGGAGGTG+GGG 0.529049 1_1:-19477351 Msa0012790:CDS
TGGGGCAGGTGCTGTTGTTG+AGG 0.529430 1_1:+19477010 Msa0012780:intron
GGAGAGTTGTACTTGTAAAC+TGG 0.529778 1_1:-19477629 Msa0012790:CDS
TTGTACTTGTAAACCGGTGC+CGG 0.530086 1_1:-19477491 Msa0012790:CDS
TGGGGAATAGGAGATGGAGG+GGG 0.531270 1_1:-19476292 Msa0012790:intron
GGTGGAGGAGGGGATGGTGA+TGG 0.531446 1_1:-19478016 Msa0012790:CDS
GGTGGAGGAGGGGATGGTGA+TGG 0.531446 1_1:-19478160 Msa0012790:intron
GGTGGAGGAGGGGATGGTGA+TGG 0.531446 1_1:-19478304 Msa0012790:CDS
TGGGGAATAGGAGATGGAGG+AGG 0.531470 1_1:-19476052 None:intergenic
TGGGGAATAGGAGATGGAGG+AGG 0.531470 1_1:-19476196 Msa0012790:intron
TAGTATGGTGGTGGAGAAGA+TGG 0.533061 1_1:-19476160 Msa0012790:CDS
GGAGAGTTGTAATAGTATGG+TGG 0.533438 1_1:-19476361 Msa0012790:intron
GAAATGGGAGATGGTGGAGG+AGG 0.534249 1_1:-19479015 None:intergenic
ATAATGGACCGGTGGAGGTG+GGG 0.535163 1_1:-19477516 Msa0012790:CDS
GGAGGGGATTTGTAGTAGTA+GGG 0.537150 1_1:-19479045 None:intergenic
GTACAACTCCCCACCTCCAC+CGG 0.537379 1_1:+19477508 Msa0012780:CDS
TTATAATAGTATGGTGGAGG+AGG 0.537438 1_1:-19478124 Msa0012790:intron
TTATAATAGTATGGTGGAGG+AGG 0.537438 1_1:-19478268 Msa0012790:CDS
TTATAATAGTATGGTGGAGG+AGG 0.537438 1_1:-19478412 Msa0012790:intron
GGCGAGTTGTACTTGTAAAC+CGG 0.537514 1_1:-19477365 Msa0012790:CDS
CTCTTGTAGTAGTATGGTGG+GGG 0.537587 1_1:-19475717 Msa0012770:intron
TGGTAAGGAGGTGGAGGAGA+CGG 0.537707 1_1:-19479078 None:intergenic
GATTTGTAGTAGTATGGTGG+TGG 0.538150 1_1:-19476265 Msa0012790:CDS
GGTGGAGACTTGTAGTAGTA+AGG 0.538214 1_1:-19476319 Msa0012790:intron
GGTGGTGGTGAAGGTGACGG+TGG 0.539358 1_1:-19475486 Msa0012770:three_prime_UTR
GCCAATGCCATTGCCATTGG+TGG 0.539964 1_1:-19475369 Msa0012770:three_prime_UTR
GTGGGGAATAGGAGATGGAG+GGG 0.540434 1_1:-19476293 Msa0012790:intron
TTGTACACATATGGAGGTGG+TGG 0.541075 1_1:-19475666 Msa0012770:CDS
GATTTGTAATAATAAGGTGG+AGG 0.541083 1_1:-19478031 Msa0012790:CDS
GATTTGTAATAATAAGGTGG+AGG 0.541083 1_1:-19478175 Msa0012790:CDS
GATTTGTAATAATAAGGTGG+AGG 0.541083 1_1:-19478319 Msa0012790:CDS
CTTTAAGCTTAGTTGTAGTG+AGG 0.541552 1_1:-19479171 None:intergenic
AGTATGGTGGAGGAGGTGAT+GGG 0.542091 1_1:-19478117 Msa0012790:intron
AGTATGGTGGAGGAGGTGAT+GGG 0.542091 1_1:-19478261 Msa0012790:CDS
AGTATGGTGGAGGAGGTGAT+GGG 0.542091 1_1:-19478405 Msa0012790:intron
TAGTATGGTGGTGGAGGAGA+TGG 0.542370 1_1:-19475968 Msa0012770:CDS
TAGTATGGTGGTGGAGGAGA+TGG 0.542370 1_1:-19476256 Msa0012790:CDS
TAGTATGGTGGTGGTGGAGA+TGG 0.542370 1_1:-19478454 Msa0012790:CDS
TTGTAGTAGTATGGTGGAGG+AGG 0.542473 1_1:-19477980 Msa0012790:CDS
ACTTGTAGTAATATGGAGGT+GGG 0.542787 1_1:-19475860 Msa0012770:intron
GAGTTGGTGCCGCTTTCACA+GGG 0.543222 1_1:-19477442 Msa0012790:CDS
GAGTTGGTGCCGCTTTCACA+GGG 0.543222 1_1:-19477706 Msa0012790:CDS
GAGTTGGTGCCGCTTTCACA+GGG 0.543222 1_1:-19477835 Msa0012790:CDS
TTGTAATAGTATGGTGGTGG+TGG 0.543812 1_1:-19478460 Msa0012790:CDS
GTCAAAGTCCTTAACTGTGA+TGG 0.543879 1_1:-19477099 Msa0012790:intron
GGAGGTGGTGGTGAAGGTGA+CGG 0.545207 1_1:-19475489 Msa0012770:three_prime_UTR
ACTCTTGTAGTAGTATGGTG+GGG 0.546800 1_1:-19475718 Msa0012770:intron
AGATTTGTAATAGTATGGAG+GGG 0.547460 1_1:-19478752 None:intergenic
GTGACTTATAATAGTATGGA+GGG 0.547717 1_1:-19478081 Msa0012790:CDS
TTGTAGTAATATGGAGGTGG+GGG 0.548364 1_1:-19475858 Msa0012770:intron
GGTGGTAGTGGAGATGGTGA+TGG 0.548826 1_1:-19478592 Msa0012790:CDS
GCTTAGTTGTAGTGAGGTGG+TGG 0.549154 1_1:-19479165 None:intergenic
TCATTGATTGTGAGGGTAGT+CGG 0.550053 1_1:+19476427 Msa0012780:CDS
TAATAATGGACTGGTGGAGG+TGG 0.550299 1_1:-19477782 Msa0012790:CDS
CTACTGGCCTTAGCAGTCAT+GGG 0.551054 1_1:-19475324 Msa0012770:three_prime_UTR
TAGTATGGTGGAGGAGGTGA+TGG 0.551842 1_1:-19477974 Msa0012790:CDS
GGAGGAGAATAATAATGGAC+CGG 0.553172 1_1:-19477920 Msa0012790:CDS
GATTTGTAATAGTATGGAGG+GGG 0.553859 1_1:-19478751 None:intergenic
TTGTACTTGTAAACCGGTGC+GGG 0.553875 1_1:-19477884 Msa0012790:CDS
GACTTATAGTAGTATGGTGG+AGG 0.554051 1_1:-19478559 Msa0012790:CDS
GGACTCTTGTAGTAGTATGG+TGG 0.554508 1_1:-19475720 Msa0012770:intron
TAGTATGGTGGTGGAGGAGA+TGG 0.555209 1_1:-19476112 Msa0012790:CDS
GAGTTGGTGCTGCTTTCACA+GGG 0.555420 1_1:-19477574 Msa0012790:intron
GGTGGTGGAGGAGATGGTGA+AGG 0.555801 1_1:-19475962 Msa0012770:CDS
GGTGGTGGAGGAGATGGTGA+AGG 0.555801 1_1:-19476250 Msa0012790:CDS
GGATGTGATATTTCCTTAGG+TGG 0.556601 1_1:-19478685 None:intergenic
GGCGGTGAATAATAATGGAC+GGG 0.558641 1_1:-19477395 Msa0012790:CDS
TTGTGCTCATATGGTGGTGG+AGG 0.558789 1_1:-19475549 Msa0012770:three_prime_UTR
ACTTGTAAACCGGTGCCGGT+GGG 0.558925 1_1:-19477487 Msa0012790:CDS
GCCTTGTGCTCATATGGTGG+TGG 0.559454 1_1:-19475552 Msa0012770:three_prime_UTR
TATTTCCTTAGGTGGAGGTG+GGG 0.559585 1_1:-19478677 None:intergenic
GGAGATTTGTAATAATAAGG+TGG 0.559604 1_1:-19478034 Msa0012790:CDS
GGAGATTTGTAATAATAAGG+TGG 0.559604 1_1:-19478178 Msa0012790:CDS
GGAGATTTGTAATAATAAGG+TGG 0.559604 1_1:-19478322 Msa0012790:CDS
CTTGTAGTAATATGGAGGTG+GGG 0.560250 1_1:-19475859 Msa0012770:intron
GGTGACTTGTACTCATAAGC+AGG 0.562235 1_1:-19475576 Msa0012770:three_prime_UTR
GTATGGGGAATAGGAGATGG+AGG 0.562235 1_1:-19476055 None:intergenic
GTATGGGGAATAGGAGATGG+AGG 0.562235 1_1:-19476199 Msa0012790:intron
GGTGGTGACTTGTATACATA+AGG 0.562735 1_1:-19475627 Msa0012770:exon
TGTAATAGTATGGTGGAGGA+AGG 0.562959 1_1:-19476354 Msa0012790:intron
TGTGATATTTCCTTAGGTGG+AGG 0.563717 1_1:-19478682 None:intergenic
GAAGCATAGATATATGTTGA+TGG 0.564276 1_1:-19479138 None:intergenic
GGACTTTGATAGTGATAAGG+AGG 0.564534 1_1:-19478994 None:intergenic
GACTTGTAATAGTATGGTGG+TGG 0.564919 1_1:-19478463 Msa0012790:CDS
ACAATCAATGAGTGGTGGTA+GGG 0.564935 1_1:-19476415 Msa0012790:intron
GACTTGTAGTAGTATGGTGG+AGG 0.565683 1_1:-19477983 Msa0012790:CDS
GGTGTGTGGGGAATAGGAGA+TGG 0.565981 1_1:-19476298 Msa0012790:intron
ATGGCCAATGCCATTGCCAT+TGG 0.566013 1_1:-19475372 Msa0012770:three_prime_UTR
GGAGGTGGAGGAGACGGCGA+TGG 0.566574 1_1:-19479072 None:intergenic
GGGGATTTGTAATAGTATGG+TGG 0.567950 1_1:-19475932 Msa0012770:intron
GTATGGTGGAGGAAGGACCT+TGG 0.567981 1_1:-19476347 Msa0012790:intron
GATTTGTAGTAGTATGGTGG+TGG 0.568654 1_1:-19476169 Msa0012790:CDS
ATGTTGAAGGGTGAACCCTT+AGG 0.569228 1_1:-19477170 Msa0012790:intron
TACTTGTAAACTGGTGCTGG+AGG 0.569421 1_1:-19477620 Msa0012790:CDS
GGTGAGTTGTACTTGTAAAC+CGG 0.570004 1_1:-19477890 Msa0012790:CDS
TGTAATAGTATGGTGGAGGA+GGG 0.570366 1_1:-19478651 None:intergenic
GGTGACTTATAGTAGTATGG+AGG 0.570595 1_1:-19478226 Msa0012790:CDS
GGTGACTTATAGTAGTATGG+AGG 0.570595 1_1:-19478370 Msa0012790:CDS
GGTGACTTATAGTAGTATGG+TGG 0.570900 1_1:-19478514 Msa0012790:CDS
CTCACATAGTGGTAAGGAGG+TGG 0.571161 1_1:-19479087 None:intergenic
TGATTTGTAATAGTAGGGAG+GGG 0.572266 1_1:-19478896 None:intergenic
GTGACTTATAGTAGTATGGA+GGG 0.574414 1_1:-19478225 Msa0012790:CDS
GTGACTTATAGTAGTATGGA+GGG 0.574414 1_1:-19478369 Msa0012790:CDS
ATAGTAGTATGGTGGAGGAG+GGG 0.575079 1_1:-19478506 Msa0012790:CDS
ATAGTAGTATGGTGGAGGAG+GGG 0.575079 1_1:-19478554 Msa0012790:CDS
GACTTGTAATAGTATGGTGG+AGG 0.575788 1_1:-19478655 None:intergenic
GGGTCATAACTGGCCACCAA+TGG 0.576181 1_1:+19475356 Msa0012780:CDS
GAATAATAATGGACTGGTGG+AGG 0.576477 1_1:-19477785 Msa0012790:CDS
GTACAACTCTCCACCTCCAC+CGG 0.576605 1_1:+19477640 Msa0012780:CDS
ACCACCACTCATTGATTGTG+AGG 0.576652 1_1:+19476419 Msa0012780:CDS
TTGTAATAGTAAGGAGGTGG+CGG 0.576762 1_1:-19478940 None:intergenic
TTGTACTTGTAAACCGGTGA+GGG 0.576828 1_1:-19477359 Msa0012790:CDS
TTGTACTCGTAAGGTGGTGG+AGG 0.578283 1_1:-19475453 Msa0012770:three_prime_UTR
CAAGTACGAGGTTGTACTCA+AGG 0.579288 1_1:+19477241 Msa0012780:CDS
GTGGAGATTTGTAGTAATAG+GGG 0.579464 1_1:-19478852 None:intergenic
CACAATCAATGAGTGGTGGT+AGG 0.579600 1_1:-19476416 Msa0012790:intron
GGTGACTTATAGTAATAAGG+AGG 0.579827 1_1:-19478706 None:intergenic
GACTTGTACTCGTAAGGTGG+TGG 0.579842 1_1:-19475456 Msa0012770:three_prime_UTR
GTGATTTGTAATAGTAGGGA+GGG 0.579855 1_1:-19478897 None:intergenic
GGAGACTTATAATAGTATGG+TGG 0.582522 1_1:-19478130 Msa0012790:intron
GGAGACTTATAATAGTATGG+TGG 0.582522 1_1:-19478274 Msa0012790:CDS
GGAGACTTATAATAGTATGG+TGG 0.582522 1_1:-19478418 Msa0012790:intron
AGCTTTGTAGGTATGTTGAA+GGG 0.583847 1_1:-19477182 Msa0012790:intron
GGAGGATGAGAAATGGGAGA+TGG 0.584569 1_1:-19479024 None:intergenic
GGTGTATGGGGAATAGGAGA+TGG 0.584811 1_1:-19476058 None:intergenic
GGTGTATGGGGAATAGGAGA+TGG 0.584811 1_1:-19476202 Msa0012790:intron
GTAATAATAAGGTGGAGGAG+GGG 0.586051 1_1:-19478026 Msa0012790:CDS
GTAATAATAAGGTGGAGGAG+GGG 0.586051 1_1:-19478170 Msa0012790:CDS
GTAATAATAAGGTGGAGGAG+GGG 0.586051 1_1:-19478314 Msa0012790:CDS
ATCTGCAGCAGCAGAAACCA+TGG 0.586752 1_1:-19475412 Msa0012770:three_prime_UTR
TTGTAAACATAAGGAGGTGG+TGG 0.587029 1_1:-19475501 Msa0012770:three_prime_UTR
ACATAGTGGTAAGGAGGTGG+AGG 0.587916 1_1:-19479084 None:intergenic
GGAGATTTGTAATAGTATGG+AGG 0.588120 1_1:-19478754 None:intergenic
TATGGTAAAACTAAGAACAA+TGG 0.591163 1_1:+19477068 Msa0012780:CDS
GTACAACTCACCACCTCCAC+CGG 0.591285 1_1:+19477901 Msa0012780:CDS
CAAGTCTCCACCACCACCCA+AGG 0.591323 1_1:+19476330 Msa0012780:CDS
GGAGGTGAATAATAATGGAC+CGG 0.592384 1_1:-19477527 Msa0012790:CDS
GGTGGTGACTTGTACTCGTA+AGG 0.592689 1_1:-19475462 Msa0012770:three_prime_UTR
GGAGATTTATAATAGTATGG+TGG 0.593272 1_1:-19476028 Msa0012770:CDS
ATATGGTGGTGGAGGTGACG+GGG 0.593718 1_1:-19475541 Msa0012770:three_prime_UTR
TAGATATATGTTGATGGTGG+AGG 0.594121 1_1:-19479132 None:intergenic
GGTGATTTGTAAACATAAGG+AGG 0.594722 1_1:-19475507 Msa0012770:three_prime_UTR
CTTTGATAGTGATAAGGAGG+TGG 0.595559 1_1:-19478991 None:intergenic
TTGTAGTAGTAAGGTGTATG+GGG 0.596782 1_1:-19476070 Msa0012790:CDS
TTGTAATAGTAAGGTGTATG+GGG 0.596782 1_1:-19476214 Msa0012790:intron
GGTGGTGGAGAAGATGGTGA+AGG 0.596877 1_1:-19476154 Msa0012790:CDS
TAACTGGCCACCAATGGCAA+TGG 0.598534 1_1:+19475362 Msa0012780:CDS
GTGGAGGTGACTTTACTGGT+GGG 0.598882 1_1:-19479116 None:intergenic
TTGTAATAGTAGGGAGGTGG+TGG 0.599442 1_1:-19478796 None:intergenic
GGTGGAGGTGACTTTACTGG+TGG 0.599892 1_1:-19479117 None:intergenic
GGAGGTGAGTAATAATGGAC+CGG 0.600850 1_1:-19477659 Msa0012790:CDS
GATTTGTAATAGTAAGGAGG+TGG 0.602705 1_1:-19478943 None:intergenic
GGAGACTTGTAGTAGTATGG+TGG 0.602875 1_1:-19475980 Msa0012770:CDS
GGTGAATAATAATGGACTGG+TGG 0.603972 1_1:-19477788 Msa0012790:CDS
TACTTGTAAACCGGTGAGGG+AGG 0.603997 1_1:-19477356 Msa0012790:CDS
GTATGGTGGAGGAGGTGATG+GGG 0.604174 1_1:-19478116 Msa0012790:intron
GTATGGTGGAGGAGGTGATG+GGG 0.604174 1_1:-19478260 Msa0012790:CDS
GTATGGTGGAGGAGGTGATG+GGG 0.604174 1_1:-19478404 Msa0012790:intron
TACTTGTAAACTGGTGCGGG+AGG 0.604823 1_1:-19477752 Msa0012790:CDS
GGAGGACTCACATAGTGGTA+AGG 0.605449 1_1:-19479093 None:intergenic
CAGCTTCAGATGCTATGACT+GGG 0.605458 1_1:+19476459 Msa0012780:CDS
GATTTGTAATAGTAGGGAGG+TGG 0.606664 1_1:-19478799 None:intergenic
TGGCGGTGAATAATAATGGA+CGG 0.607231 1_1:-19477396 Msa0012790:CDS
GTAATAGTATGGTGGAGGAG+GGG 0.608902 1_1:-19478650 None:intergenic
TACTTGTAAACCGGTGCGGG+TGG 0.609677 1_1:-19477881 Msa0012790:CDS
TGTACACATATGGAGGTGGT+GGG 0.610740 1_1:-19475665 Msa0012770:CDS
TGGAGGTGACTTTACTGGTG+GGG 0.614515 1_1:-19479115 None:intergenic
TTGAAGGGTGAACCCTTAGG+TGG 0.615038 1_1:-19477167 Msa0012790:intron
GGTGGAGGAAGGACCTTGGG+TGG 0.617521 1_1:-19476343 Msa0012790:intron
TTGTATACATAAGGAGGTGG+TGG 0.617800 1_1:-19475618 Msa0012770:exon
GGAAGTCGAAATCAAAACAA+TGG 0.618171 1_1:-19475391 Msa0012770:three_prime_UTR
CTATGTCAAATATGGTTCCA+CGG 0.618636 1_1:+19477121 Msa0012780:CDS
GGGGACTTGTAGTAGTATGG+TGG 0.619796 1_1:-19477986 Msa0012790:CDS
TGTGGGGAATAGGAGATGGA+GGG 0.622240 1_1:-19476294 Msa0012790:intron
GGAGGTGAATAATAATGGAC+TGG 0.623006 1_1:-19477791 Msa0012790:CDS
GGAGATTTGTAGTAGTATGG+TGG 0.623023 1_1:-19476268 Msa0012790:CDS
GGTGACTTGTAGTAGTATGG+AGG 0.628514 1_1:-19477938 Msa0012790:CDS
GGTGACTTATAATAGTAAGG+TGG 0.630739 1_1:-19478610 Msa0012790:CDS
GGGGATTTGTAGTAGTAGGG+AGG 0.632068 1_1:-19479042 None:intergenic
AGCCGGGAGCAAAATCGTCA+AGG 0.634540 1_1:+19477043 Msa0012780:CDS
GGTGATTTGTAATAGTAGGG+AGG 0.636796 1_1:-19478898 None:intergenic
TTGTAGTAGTAAGGTGTGTG+GGG 0.636943 1_1:-19476310 Msa0012790:intron
TGGTGGAGAAGATGGTGAAG+GGG 0.636958 1_1:-19476152 Msa0012790:CDS
GGTGACTTGTAGGTATATGG+AGG 0.636983 1_1:-19477809 Msa0012790:CDS
GATTTGTAATAGTAGGGAGG+GGG 0.638280 1_1:-19478895 None:intergenic
GCATAGATATATGTTGATGG+TGG 0.638721 1_1:-19479135 None:intergenic
GGGGACTTATAGTAGTATGG+TGG 0.639558 1_1:-19478562 Msa0012790:CDS
ACTTGTAGTAGTAAGGTGTG+TGG 0.641974 1_1:-19476312 Msa0012790:intron
GGACTCACATAGTGGTAAGG+AGG 0.642569 1_1:-19479090 None:intergenic
GTACACATATGGAGGTGGTG+GGG 0.646967 1_1:-19475664 Msa0012770:CDS
GGAGATTTGTAATAGTAAGG+AGG 0.647666 1_1:-19478946 None:intergenic
GGAGACTTGTAGTAATATGG+AGG 0.647850 1_1:-19475864 Msa0012770:intron
GGAGATTTATAGTAGTATGG+TGG 0.648140 1_1:-19476124 Msa0012790:CDS
GGGGATTTGTAGTAGTATGG+TGG 0.648818 1_1:-19476172 Msa0012790:CDS
CCACCACTCATTGATTGTGA+GGG 0.649112 1_1:+19476420 Msa0012780:CDS
TGGAGATTTGTAGTAATAGG+GGG 0.649925 1_1:-19478851 None:intergenic
GGTGACTTATAGGTGTATGG+AGG 0.650746 1_1:-19477545 Msa0012790:CDS
GGTGACTTATAGGTGTATGG+AGG 0.650746 1_1:-19477677 Msa0012790:CDS
GACTTGTACACATATGGAGG+TGG 0.651696 1_1:-19475669 Msa0012770:CDS
GGGGACTTGTAATAGTATGG+TGG 0.651859 1_1:-19478658 None:intergenic
TCCACCACCATATGAGCACA+AGG 0.652841 1_1:+19475551 Msa0012780:CDS
GACTTGTATACATAAGGAGG+TGG 0.657018 1_1:-19475621 Msa0012770:exon
CCCTCACAATCAATGAGTGG+TGG 0.659267 1_1:-19476420 Msa0012790:intron
GGTGATTTGTAATAGTAGGG+AGG 0.663805 1_1:-19478802 None:intergenic
CATAACAAGAAACATCTCCA+AGG 0.665483 1_1:+19476499 Msa0012780:CDS
GGGTGAGGATATGCAACGGG+TGG 0.666106 1_1:-19476388 Msa0012790:intron
GGAGCCTTGTGCTCATATGG+TGG 0.666223 1_1:-19475555 Msa0012770:three_prime_UTR
GGTGAGTAATAATGGACCGG+TGG 0.666623 1_1:-19477656 Msa0012790:CDS
GGAGAATAATAATGGACCGG+TGG 0.668364 1_1:-19477917 Msa0012790:CDS
GTTGTACTTGTAAACCGGTG+AGG 0.670456 1_1:-19477360 Msa0012790:CDS
GGAGATTTGTAGTAATAGGG+GGG 0.670953 1_1:-19478850 None:intergenic
ATACCTACAAAGCTAAACCA+AGG 0.673552 1_1:+19477191 Msa0012780:CDS
GCTGTACTTGTAAACTGGTG+CGG 0.675294 1_1:-19477756 Msa0012790:CDS
GGTGAATAATAATGGACCGG+TGG 0.676835 1_1:-19477524 Msa0012790:CDS
GGTGACTTGTAATAGTATGG+TGG 0.678540 1_1:-19478466 Msa0012790:CDS
GATTTGTAAACATAAGGAGG+TGG 0.678616 1_1:-19475504 Msa0012770:three_prime_UTR
GGTGACTTGTACTCGTAAGG+TGG 0.681989 1_1:-19475459 Msa0012770:three_prime_UTR
CTACCCTCACAATCAATGAG+TGG 0.682458 1_1:-19476423 Msa0012790:intron
GGATCCTTGTGTATATATGG+GGG 0.683278 1_1:-19475911 Msa0012770:intron
GGTGAATAATAATGGACGGG+TGG 0.689433 1_1:-19477392 Msa0012790:CDS
AAGGCCAGTAGCCCCAAAAG+GGG 0.692826 1_1:+19475336 Msa0012780:CDS
ATGTGGGTGAGGATATGCAA+CGG 0.702769 1_1:-19476392 Msa0012790:intron
GGTGACTTGTAGTAATATGG+CGG 0.703705 1_1:-19477413 Msa0012790:CDS
GTTGTACTTGTAAACCGGTG+CGG 0.713118 1_1:-19477885 Msa0012790:CDS
GGTGACTTGTACACATATGG+AGG 0.728444 1_1:-19475672 Msa0012770:CDS
AGTTGGTGCCGCTTTCACAG+GGG 0.739335 1_1:-19477441 Msa0012790:CDS
AGTTGGTGCCGCTTTCACAG+GGG 0.739335 1_1:-19477705 Msa0012790:CDS
AGTTGGTGCCGCTTTCACAG+GGG 0.739335 1_1:-19477834 Msa0012790:CDS
AAGGGCAGCCTTACACACCG+TGG 0.739414 1_1:-19477138 Msa0012790:intron
AGTTGGTGCTGCTTTCACAG+GGG 0.739820 1_1:-19477573 Msa0012790:intron
GGTGACTTGTATACATAAGG+AGG 0.740574 1_1:-19475624 Msa0012770:exon
GAAATCCAAAGACAAGTACG+AGG 0.772792 1_1:+19477229 Msa0012780:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAGAAAGAATTTTTATATT+GGG - chr1_1:19476911-19476930 Msa0012790:intron 10.0%
!! ATTATGGATAAAAATTAAGT+TGG - chr1_1:19476775-19476794 Msa0012790:intron 15.0%
!! GTTATTAAATTATAACAACA+TGG - chr1_1:19476884-19476903 Msa0012790:intron 15.0%
!!! GTTAGAAAGAATTTTTATAT+TGG - chr1_1:19476912-19476931 Msa0012790:intron 15.0%
!!! GATTAAACTAATTTTGTTTT+GGG + chr1_1:19476991-19477010 Msa0012780:intron 15.0%
!!! ATTAAACTAATTTTGTTTTG+GGG + chr1_1:19476992-19477011 Msa0012780:intron 15.0%
!! GCAACTTATTATTTGTATTA+TGG - chr1_1:19476791-19476810 Msa0012790:intron 20.0%
!!! TGTTTTTATTTATTCATGTC+AGG - chr1_1:19476830-19476849 Msa0012790:intron 20.0%
!! CGTATAAAGACATATTATAT+AGG - chr1_1:19476972-19476991 Msa0012790:intron 20.0%
!!! CGATTAAACTAATTTTGTTT+TGG + chr1_1:19476990-19477009 Msa0012780:intron 20.0%
! TACATTACATTACTTAGGAT+TGG + chr1_1:19476522-19476541 Msa0012780:intron 25.0%
!! AAGAATTTTTATATTGGGCA+TGG - chr1_1:19476906-19476925 Msa0012790:intron 25.0%
! TATGGTAAAACTAAGAACAA+TGG + chr1_1:19477068-19477087 Msa0012780:CDS 25.0%
! TATATGGAGGTGAATAATAA+TGG - chr1_1:19477799-19477818 Msa0012790:CDS 25.0%
GATTTATAATAGTATGGTGG+TGG - chr1_1:19476028-19476047 Msa0012770:CDS 30.0%
GGAGATTTATAATAGTATGG+TGG - chr1_1:19476031-19476050 Msa0012770:CDS 30.0%
GGAGGAGATTTATAATAGTA+TGG - chr1_1:19476034-19476053 Msa0012770:CDS 30.0%
TTTGTAGTAGTAAGGTGTAT+GGG - chr1_1:19476074-19476093 Msa0012790:CDS 30.0%
ATTTGTAGTAGTAAGGTGTA+TGG - chr1_1:19476075-19476094 Msa0012790:CDS 30.0%
TTGTAATAGTAAGGTGTATG+GGG - chr1_1:19476217-19476236 Msa0012790:intron 30.0%
CTTGTAATAGTAAGGTGTAT+GGG - chr1_1:19476218-19476237 Msa0012790:intron 30.0%
ACTTGTAATAGTAAGGTGTA+TGG - chr1_1:19476219-19476238 Msa0012790:intron 30.0%
CTAAGTAATGTAATGTACCT+TGG - chr1_1:19476519-19476538 Msa0012790:intron 30.0%
CAAGGTACATTACATTACTT+AGG + chr1_1:19476517-19476536 Msa0012780:intron 30.0%
GACTTTGACTATGTCAAATA+TGG + chr1_1:19477113-19477132 Msa0012780:CDS 30.0%
!! GAAATGTTTCTTTGAAGCAT+AGG - chr1_1:19477279-19477298 Msa0012790:intron 30.0%
AATATGGCGGTGAATAATAA+TGG - chr1_1:19477403-19477422 Msa0012790:CDS 30.0%
TGTATGGAGGTGAATAATAA+TGG - chr1_1:19477535-19477554 Msa0012790:CDS 30.0%
GATTTATAGTAGTAAGGAGT+TGG - chr1_1:19477725-19477744 Msa0012790:CDS 30.0%
AGTATGGAGGAGAATAATAA+TGG - chr1_1:19477928-19477947 Msa0012790:CDS 30.0%
GATTTGTAATAATAAGGTGG+AGG - chr1_1:19478034-19478053 Msa0012790:CDS 30.0%
GGAGATTTGTAATAATAAGG+TGG - chr1_1:19478037-19478056 Msa0012790:CDS 30.0%
GGAGGAGATTTGTAATAATA+AGG - chr1_1:19478040-19478059 Msa0012790:CDS 30.0%
GTGACTTATAATAGTATGGA+GGG - chr1_1:19478084-19478103 Msa0012790:CDS 30.0%
GATTTGTAATAATAAGGTGG+AGG - chr1_1:19478034-19478053 Msa0012790:CDS 30.0%
GGAGATTTGTAATAATAAGG+TGG - chr1_1:19478037-19478056 Msa0012790:CDS 30.0%
GGAGGAGATTTGTAATAATA+AGG - chr1_1:19478040-19478059 Msa0012790:CDS 30.0%
GATTTGTAATAATAAGGTGG+AGG - chr1_1:19478034-19478053 Msa0012790:CDS 30.0%
GGAGATTTGTAATAATAAGG+TGG - chr1_1:19478037-19478056 Msa0012790:CDS 30.0%
GGAGGAGATTTGTAATAATA+AGG - chr1_1:19478040-19478059 Msa0012790:CDS 30.0%
TTATAATAGTAAGGTGGTAG+TGG - chr1_1:19478607-19478626 Msa0012790:CDS 30.0%
AGATTTGTAATAGTATGGAG+GGG - chr1_1:19478755-19478774 None:intergenic 30.0%
GAGATTTGTAATAGTATGGA+GGG - chr1_1:19478756-19478775 None:intergenic 30.0%
GAAGCATAGATATATGTTGA+TGG - chr1_1:19479141-19479160 None:intergenic 30.0%
GGAAGTCGAAATCAAAACAA+TGG - chr1_1:19475394-19475413 Msa0012770:three_prime_UTR 35.0%
!!! TGTTTTGATTTCGACTTCCA+TGG + chr1_1:19475395-19475414 Msa0012780:CDS 35.0%
GATTTGTAAACATAAGGAGG+TGG - chr1_1:19475507-19475526 Msa0012770:three_prime_UTR 35.0%
! GGTGATTTGTAAACATAAGG+AGG - chr1_1:19475510-19475529 Msa0012770:three_prime_UTR 35.0%
! GGTGGTGATTTGTAAACATA+AGG - chr1_1:19475513-19475532 Msa0012770:three_prime_UTR 35.0%
ACTTGTAGTAATATGGAGGT+GGG - chr1_1:19475863-19475882 Msa0012770:intron 35.0%
TGGATCCTTGTGTATATATG+GGG - chr1_1:19475915-19475934 Msa0012770:intron 35.0%
GTGGATCCTTGTGTATATAT+GGG - chr1_1:19475916-19475935 Msa0012770:intron 35.0%
!! TTATAATAGTATGGTGGTGG+AGG - chr1_1:19476025-19476044 Msa0012770:CDS 35.0%
TTGTAGTAGTAAGGTGTATG+GGG - chr1_1:19476073-19476092 Msa0012790:CDS 35.0%
GATTTATAGTAGTATGGTGG+TGG - chr1_1:19476124-19476143 Msa0012790:CDS 35.0%
GGAGATTTATAGTAGTATGG+TGG - chr1_1:19476127-19476146 Msa0012790:CDS 35.0%
! TTCTTGTTATGTGACTTTGC+AGG - chr1_1:19476490-19476509 Msa0012790:intron 35.0%
CATAACAAGAAACATCTCCA+AGG + chr1_1:19476499-19476518 Msa0012780:CDS 35.0%
!!! AACTAATTTTGTTTTGGGGC+AGG + chr1_1:19476996-19477015 Msa0012780:intron 35.0%
AAAGTATGCCATCACAGTTA+AGG + chr1_1:19477091-19477110 Msa0012780:CDS 35.0%
CTATGTCAAATATGGTTCCA+CGG + chr1_1:19477121-19477140 Msa0012780:CDS 35.0%
! AGCTTTGTAGGTATGTTGAA+GGG - chr1_1:19477185-19477204 Msa0012790:intron 35.0%
!! TAGCTTTGTAGGTATGTTGA+AGG - chr1_1:19477186-19477205 Msa0012790:intron 35.0%
ATACCTACAAAGCTAAACCA+AGG + chr1_1:19477191-19477210 Msa0012780:CDS 35.0%
! TCAAGTACAAGTTTGTTCCT+TGG - chr1_1:19477211-19477230 Msa0012790:intron 35.0%
!! TTCTTTGAAGCATAGGCAAA+TGG - chr1_1:19477272-19477291 Msa0012790:intron 35.0%
GATTTGTAGTAGTAAGGAGT+TGG - chr1_1:19477329-19477348 Msa0012790:CDS 35.0%
GATTTGTAGTAGTAAGGAGT+TGG - chr1_1:19477329-19477348 Msa0012790:CDS 35.0%
GATTTGTAGTAGTAAGGAGT+TGG - chr1_1:19477329-19477348 Msa0012790:CDS 35.0%
TGTATGGAGGTGAGTAATAA+TGG - chr1_1:19477667-19477686 Msa0012790:CDS 35.0%
GGAGGTGATTTATAGTAGTA+AGG - chr1_1:19477731-19477750 Msa0012790:CDS 35.0%
GATTTGTAGTAGTAAGGAGT+TGG - chr1_1:19477329-19477348 Msa0012790:CDS 35.0%
TGTAATAATAAGGTGGAGGA+GGG - chr1_1:19478030-19478049 Msa0012790:CDS 35.0%
TTGTAATAATAAGGTGGAGG+AGG - chr1_1:19478031-19478050 Msa0012790:CDS 35.0%
GGTGACTTATAATAGTATGG+AGG - chr1_1:19478085-19478104 Msa0012790:CDS 35.0%
GGTGGTGACTTATAATAGTA+TGG - chr1_1:19478088-19478107 Msa0012790:CDS 35.0%
! TTATAATAGTATGGTGGAGG+AGG - chr1_1:19478127-19478146 Msa0012790:intron 35.0%
GACTTATAATAGTATGGTGG+AGG - chr1_1:19478130-19478149 Msa0012790:intron 35.0%
GGAGACTTATAATAGTATGG+TGG - chr1_1:19478133-19478152 Msa0012790:intron 35.0%
GGTGGAGACTTATAATAGTA+TGG - chr1_1:19478136-19478155 Msa0012790:intron 35.0%
TGTAATAATAAGGTGGAGGA+GGG - chr1_1:19478030-19478049 Msa0012790:CDS 35.0%
TTGTAATAATAAGGTGGAGG+AGG - chr1_1:19478031-19478050 Msa0012790:CDS 35.0%
GTGACTTATAGTAGTATGGA+GGG - chr1_1:19478228-19478247 Msa0012790:CDS 35.0%
! TTATAATAGTATGGTGGAGG+AGG - chr1_1:19478127-19478146 Msa0012790:intron 35.0%
GACTTATAATAGTATGGTGG+AGG - chr1_1:19478130-19478149 Msa0012790:intron 35.0%
GGAGACTTATAATAGTATGG+TGG - chr1_1:19478133-19478152 Msa0012790:intron 35.0%
GGTGGAGACTTATAATAGTA+TGG - chr1_1:19478136-19478155 Msa0012790:intron 35.0%
TGTAATAATAAGGTGGAGGA+GGG - chr1_1:19478030-19478049 Msa0012790:CDS 35.0%
TTGTAATAATAAGGTGGAGG+AGG - chr1_1:19478031-19478050 Msa0012790:CDS 35.0%
GTGACTTATAGTAGTATGGA+GGG - chr1_1:19478228-19478247 Msa0012790:CDS 35.0%
! TTATAATAGTATGGTGGAGG+AGG - chr1_1:19478127-19478146 Msa0012790:intron 35.0%
GACTTATAATAGTATGGTGG+AGG - chr1_1:19478130-19478149 Msa0012790:intron 35.0%
GGAGACTTATAATAGTATGG+TGG - chr1_1:19478133-19478152 Msa0012790:intron 35.0%
GGTGGAGACTTATAATAGTA+TGG - chr1_1:19478136-19478155 Msa0012790:intron 35.0%
GGTGACTTATAATAGTAAGG+TGG - chr1_1:19478613-19478632 Msa0012790:CDS 35.0%
GGTGGTGACTTATAATAGTA+AGG - chr1_1:19478088-19478107 Msa0012790:CDS 35.0%
GGTGACTTATAGTAATAAGG+AGG - chr1_1:19478709-19478728 None:intergenic 35.0%
GGTGGTGACTTATAGTAATA+AGG - chr1_1:19478712-19478731 None:intergenic 35.0%
GATTTGTAATAGTATGGAGG+GGG - chr1_1:19478754-19478773 None:intergenic 35.0%
GGAGATTTGTAATAGTATGG+AGG - chr1_1:19478757-19478776 None:intergenic 35.0%
GGAGGAGATTTGTAATAGTA+TGG - chr1_1:19478760-19478779 None:intergenic 35.0%
! GGAGGTGATTTGTAATAGTA+GGG - chr1_1:19478808-19478827 None:intergenic 35.0%
! TGGAGGTGATTTGTAATAGT+AGG - chr1_1:19478809-19478828 None:intergenic 35.0%
TGGAGATTTGTAGTAATAGG+GGG - chr1_1:19478854-19478873 None:intergenic 35.0%
GTGGAGATTTGTAGTAATAG+GGG - chr1_1:19478855-19478874 None:intergenic 35.0%
GGTGGAGATTTGTAGTAATA+GGG - chr1_1:19478856-19478875 None:intergenic 35.0%
TGGTGGAGATTTGTAGTAAT+AGG - chr1_1:19478857-19478876 None:intergenic 35.0%
! TGATTTGTAATAGTAGGGAG+GGG - chr1_1:19478803-19478822 None:intergenic 35.0%
! GTGATTTGTAATAGTAGGGA+GGG - chr1_1:19478804-19478823 None:intergenic 35.0%
! GGAGGTGATTTGTAATAGTA+GGG - chr1_1:19478808-19478827 None:intergenic 35.0%
! TGGAGGTGATTTGTAATAGT+AGG - chr1_1:19478809-19478828 None:intergenic 35.0%
GATTTGTAATAGTAAGGAGG+TGG - chr1_1:19478946-19478965 None:intergenic 35.0%
GGAGATTTGTAATAGTAAGG+AGG - chr1_1:19478949-19478968 None:intergenic 35.0%
!! TAGATATATGTTGATGGTGG+AGG - chr1_1:19479135-19479154 None:intergenic 35.0%
! GCATAGATATATGTTGATGG+TGG - chr1_1:19479138-19479157 None:intergenic 35.0%
TTGTAAACATAAGGAGGTGG+TGG - chr1_1:19475504-19475523 Msa0012770:three_prime_UTR 40.0%
TTGTATACATAAGGAGGTGG+TGG - chr1_1:19475621-19475640 Msa0012770:exon 40.0%
GACTTGTATACATAAGGAGG+TGG - chr1_1:19475624-19475643 Msa0012770:exon 40.0%
! GGTGACTTGTATACATAAGG+AGG - chr1_1:19475627-19475646 Msa0012770:exon 40.0%
! GGTGGTGACTTGTATACATA+AGG - chr1_1:19475630-19475649 Msa0012770:CDS 40.0%
ACTCTTGTAGTAGTATGGTG+GGG - chr1_1:19475721-19475740 Msa0012770:intron 40.0%
GACTCTTGTAGTAGTATGGT+GGG - chr1_1:19475722-19475741 Msa0012770:intron 40.0%
GATTTGTAGTAGTAAGGTGG+TGG - chr1_1:19475768-19475787 Msa0012770:intron 40.0%
GGAGATTTGTAGTAGTAAGG+TGG - chr1_1:19475771-19475790 Msa0012770:intron 40.0%
GGAGGAGATTTGTAGTAGTA+AGG - chr1_1:19475774-19475793 Msa0012770:intron 40.0%
!! TGTAATAGTATGGTGGTGGA+GGG - chr1_1:19475812-19475831 Msa0012770:intron 40.0%
!! TTGTAATAGTATGGTGGTGG+AGG - chr1_1:19475813-19475832 Msa0012770:intron 40.0%
GACTTGTAATAGTATGGTGG+TGG - chr1_1:19475816-19475835 Msa0012770:intron 40.0%
GGAGACTTGTAATAGTATGG+TGG - chr1_1:19475819-19475838 Msa0012770:intron 40.0%
GGTGGAGACTTGTAATAGTA+TGG - chr1_1:19475822-19475841 Msa0012770:intron 40.0%
TTGTAGTAATATGGAGGTGG+GGG - chr1_1:19475861-19475880 Msa0012770:intron 40.0%
CTTGTAGTAATATGGAGGTG+GGG - chr1_1:19475862-19475881 Msa0012770:intron 40.0%
GACTTGTAGTAATATGGAGG+TGG - chr1_1:19475864-19475883 Msa0012770:intron 40.0%
GGAGACTTGTAGTAATATGG+AGG - chr1_1:19475867-19475886 Msa0012770:intron 40.0%
TGGGGAGACTTGTAGTAATA+TGG - chr1_1:19475870-19475889 Msa0012770:intron 40.0%
GGATCCTTGTGTATATATGG+GGG - chr1_1:19475914-19475933 Msa0012770:intron 40.0%
GGTGGATCCTTGTGTATATA+TGG - chr1_1:19475917-19475936 Msa0012770:intron 40.0%
GGGGATTTGTAATAGTATGG+TGG - chr1_1:19475935-19475954 Msa0012770:intron 40.0%
GGTGGGGATTTGTAATAGTA+TGG - chr1_1:19475938-19475957 Msa0012770:CDS 40.0%
TAGTAAGGTGTATGGGGAAT+AGG - chr1_1:19476067-19476086 Msa0012790:CDS 40.0%
!! TTATAGTAGTATGGTGGTGG+AGG - chr1_1:19476121-19476140 Msa0012790:CDS 40.0%
GGGGGAGATTTATAGTAGTA+TGG - chr1_1:19476130-19476149 Msa0012790:CDS 40.0%
GATTTGTAGTAGTATGGTGG+TGG - chr1_1:19476172-19476191 Msa0012790:CDS 40.0%
TAGTAAGGTGTATGGGGAAT+AGG - chr1_1:19476067-19476086 Msa0012790:CDS 40.0%
GGAGGAGACTTGTAATAGTA+AGG - chr1_1:19476226-19476245 Msa0012790:CDS 40.0%
GATTTGTAGTAGTATGGTGG+TGG - chr1_1:19476172-19476191 Msa0012790:CDS 40.0%
GGAGATTTGTAGTAGTATGG+TGG - chr1_1:19476271-19476290 Msa0012790:CDS 40.0%
GGAGGAGATTTGTAGTAGTA+TGG - chr1_1:19475774-19475793 Msa0012770:intron 40.0%
TTGTAGTAGTAAGGTGTGTG+GGG - chr1_1:19476313-19476332 Msa0012790:intron 40.0%
CTTGTAGTAGTAAGGTGTGT+GGG - chr1_1:19476314-19476333 Msa0012790:intron 40.0%
ACTTGTAGTAGTAAGGTGTG+TGG - chr1_1:19476315-19476334 Msa0012790:intron 40.0%
! TGTAATAGTATGGTGGAGGA+AGG - chr1_1:19476357-19476376 Msa0012790:intron 40.0%
GAGTTGTAATAGTATGGTGG+AGG - chr1_1:19476361-19476380 Msa0012790:intron 40.0%
GGAGAGTTGTAATAGTATGG+TGG - chr1_1:19476364-19476383 Msa0012790:intron 40.0%
GGAGGAGAGTTGTAATAGTA+TGG - chr1_1:19476367-19476386 Msa0012790:intron 40.0%
ACAATCAATGAGTGGTGGTA+GGG - chr1_1:19476418-19476437 Msa0012790:intron 40.0%
! TCATTGATTGTGAGGGTAGT+CGG + chr1_1:19476427-19476446 Msa0012780:CDS 40.0%
AGCAAAATCGTCAAGGCTTA+TGG + chr1_1:19477050-19477069 Msa0012780:CDS 40.0%
GTCAAAGTCCTTAACTGTGA+TGG - chr1_1:19477102-19477121 Msa0012790:intron 40.0%
!! GTTCCTTGGTTTAGCTTTGT+AGG - chr1_1:19477197-19477216 Msa0012790:intron 40.0%
GAAATCCAAAGACAAGTACG+AGG + chr1_1:19477229-19477248 Msa0012780:CDS 40.0%
TACAACCTCGTACTTGTCTT+TGG - chr1_1:19477237-19477256 Msa0012790:intron 40.0%
!! TAGTAGTAAGGAGTTGGTGA+AGG - chr1_1:19477323-19477342 Msa0012790:intron 40.0%
TTGTACTTGTAAACCGGTGA+GGG - chr1_1:19477362-19477381 Msa0012790:CDS 40.0%
! TGGCGGTGAATAATAATGGA+CGG - chr1_1:19477399-19477418 Msa0012790:CDS 40.0%
! GGTGACTTGTAGTAATATGG+CGG - chr1_1:19477416-19477435 Msa0012790:CDS 40.0%
! GGAGGTGATTTGTAGTAGTA+AGG - chr1_1:19477467-19477486 Msa0012790:CDS 40.0%
!! GGAGGTGAATAATAATGGAC+CGG - chr1_1:19477530-19477549 Msa0012790:CDS 40.0%
! GGAGGTGATTTGTAGTAGTA+AGG - chr1_1:19477467-19477486 Msa0012790:CDS 40.0%
TTGTACTTGTAAACTGGTGC+TGG - chr1_1:19477626-19477645 Msa0012790:CDS 40.0%
GGAGAGTTGTACTTGTAAAC+TGG - chr1_1:19477632-19477651 Msa0012790:CDS 40.0%
!! GAATAATAATGGACTGGTGG+AGG - chr1_1:19477788-19477807 Msa0012790:CDS 40.0%
!! GGTGAATAATAATGGACTGG+TGG - chr1_1:19477791-19477810 Msa0012790:CDS 40.0%
!! GGAGGTGAATAATAATGGAC+TGG - chr1_1:19477530-19477549 Msa0012790:CDS 40.0%
! GGAGGTGATTTGTAGTAGTA+AGG - chr1_1:19477467-19477486 Msa0012790:CDS 40.0%
GGTGAGTTGTACTTGTAAAC+CGG - chr1_1:19477893-19477912 Msa0012790:CDS 40.0%
!! GGAGGAGAATAATAATGGAC+CGG - chr1_1:19477923-19477942 Msa0012790:CDS 40.0%
GTAATAATAAGGTGGAGGAG+GGG - chr1_1:19478029-19478048 Msa0012790:CDS 40.0%
GTAATAATAAGGTGGAGGAG+GGG - chr1_1:19478029-19478048 Msa0012790:CDS 40.0%
GGTGACTTATAGTAGTATGG+AGG - chr1_1:19478229-19478248 Msa0012790:CDS 40.0%
GGTGGTGACTTATAGTAGTA+TGG - chr1_1:19478232-19478251 Msa0012790:CDS 40.0%
GTAATAATAAGGTGGAGGAG+GGG - chr1_1:19478029-19478048 Msa0012790:CDS 40.0%
GGTGACTTATAGTAGTATGG+AGG - chr1_1:19478229-19478248 Msa0012790:CDS 40.0%
GGTGGTGACTTATAGTAGTA+TGG - chr1_1:19478232-19478251 Msa0012790:CDS 40.0%
!! TTGTAATAGTATGGTGGTGG+TGG - chr1_1:19475813-19475832 Msa0012770:intron 40.0%
GACTTGTAATAGTATGGTGG+TGG - chr1_1:19475816-19475835 Msa0012770:intron 40.0%
! GGTGACTTGTAATAGTATGG+TGG - chr1_1:19478469-19478488 Msa0012790:CDS 40.0%
! GGTGGTGACTTGTAATAGTA+TGG - chr1_1:19478472-19478491 Msa0012790:CDS 40.0%
! TATAGTAGTATGGTGGAGGA+GGG - chr1_1:19478510-19478529 Msa0012790:CDS 40.0%
! TTATAGTAGTATGGTGGAGG+AGG - chr1_1:19478511-19478530 Msa0012790:CDS 40.0%
GACTTATAGTAGTATGGTGG+AGG - chr1_1:19478514-19478533 Msa0012790:CDS 40.0%
GGTGACTTATAGTAGTATGG+TGG - chr1_1:19478229-19478248 Msa0012790:CDS 40.0%
GGTGGTGACTTATAGTAGTA+TGG - chr1_1:19478232-19478251 Msa0012790:CDS 40.0%
! TATAGTAGTATGGTGGAGGA+GGG - chr1_1:19478510-19478529 Msa0012790:CDS 40.0%
! TTATAGTAGTATGGTGGAGG+AGG - chr1_1:19478511-19478530 Msa0012790:CDS 40.0%
GACTTATAGTAGTATGGTGG+AGG - chr1_1:19478514-19478533 Msa0012790:CDS 40.0%
! TGTAATAGTATGGTGGAGGA+GGG - chr1_1:19476357-19476376 Msa0012790:intron 40.0%
! TTGTAATAGTATGGTGGAGG+AGG - chr1_1:19476358-19476377 Msa0012790:intron 40.0%
GACTTGTAATAGTATGGTGG+AGG - chr1_1:19475816-19475835 Msa0012770:intron 40.0%
ATATTTCCTTAGGTGGAGGT+GGG - chr1_1:19478681-19478700 None:intergenic 40.0%
TGTGATATTTCCTTAGGTGG+AGG - chr1_1:19478685-19478704 None:intergenic 40.0%
GGATGTGATATTTCCTTAGG+TGG - chr1_1:19478688-19478707 None:intergenic 40.0%
GGAGGATGTGATATTTCCTT+AGG - chr1_1:19478691-19478710 None:intergenic 40.0%
GATTTGTAATAGTAGGGAGG+TGG - chr1_1:19478802-19478821 None:intergenic 40.0%
! GGTGATTTGTAATAGTAGGG+AGG - chr1_1:19478805-19478824 None:intergenic 40.0%
GGAGATTTGTAGTAATAGGG+GGG - chr1_1:19478853-19478872 None:intergenic 40.0%
GATTTGTAATAGTAGGGAGG+GGG - chr1_1:19478802-19478821 None:intergenic 40.0%
! GGTGATTTGTAATAGTAGGG+AGG - chr1_1:19478805-19478824 None:intergenic 40.0%
TTGTAATAGTAAGGAGGTGG+CGG - chr1_1:19478943-19478962 None:intergenic 40.0%
GGGGGAGATTTGTAATAGTA+AGG - chr1_1:19478952-19478971 None:intergenic 40.0%
!! CTTTGATAGTGATAAGGAGG+TGG - chr1_1:19478994-19479013 None:intergenic 40.0%
!! GGACTTTGATAGTGATAAGG+AGG - chr1_1:19478997-19479016 None:intergenic 40.0%
!! GGAGGACTTTGATAGTGATA+AGG - chr1_1:19479000-19479019 None:intergenic 40.0%
TAGTAGGGAGGATGAGAAAT+GGG - chr1_1:19479033-19479052 None:intergenic 40.0%
! GGTGACTTGTACTCATAAGC+AGG - chr1_1:19475579-19475598 Msa0012770:three_prime_UTR 45.0%
TGTACACATATGGAGGTGGT+GGG - chr1_1:19475668-19475687 Msa0012770:CDS 45.0%
TTGTACACATATGGAGGTGG+TGG - chr1_1:19475669-19475688 Msa0012770:CDS 45.0%
GACTTGTACACATATGGAGG+TGG - chr1_1:19475672-19475691 Msa0012770:CDS 45.0%
! GGTGACTTGTACACATATGG+AGG - chr1_1:19475675-19475694 Msa0012770:CDS 45.0%
! GGTGGTGACTTGTACACATA+TGG - chr1_1:19475678-19475697 Msa0012770:CDS 45.0%
CTCTTGTAGTAGTATGGTGG+GGG - chr1_1:19475720-19475739 Msa0012770:intron 45.0%
GGACTCTTGTAGTAGTATGG+TGG - chr1_1:19475723-19475742 Msa0012770:intron 45.0%
GGAGGACTCTTGTAGTAGTA+TGG - chr1_1:19475726-19475745 Msa0012770:intron 45.0%
! TTGTAGTAGTAAGGTGGTGG+AGG - chr1_1:19475765-19475784 Msa0012770:intron 45.0%
!! GTAATAGTATGGTGGTGGAG+GGG - chr1_1:19475811-19475830 Msa0012770:intron 45.0%
TGTGTATATATGGGGGTGGA+GGG - chr1_1:19475907-19475926 Msa0012770:intron 45.0%
TTGTGTATATATGGGGGTGG+AGG - chr1_1:19475908-19475927 Msa0012770:intron 45.0%
TCCACCCCCATATATACACA+AGG + chr1_1:19475907-19475926 Msa0012780:CDS 45.0%
TCCTTGTGTATATATGGGGG+TGG - chr1_1:19475911-19475930 Msa0012770:intron 45.0%
!! TTGTAGTAGTATGGTGGTGG+AGG - chr1_1:19475977-19475996 Msa0012770:CDS 45.0%
GACTTGTAGTAGTATGGTGG+TGG - chr1_1:19475980-19475999 Msa0012770:CDS 45.0%
GGAGACTTGTAGTAGTATGG+TGG - chr1_1:19475983-19476002 Msa0012770:CDS 45.0%
! GGGGGTGATTTGTAGTAGTA+AGG - chr1_1:19476082-19476101 Msa0012790:CDS 45.0%
!! TAGTATGGTGGTGGAGAAGA+TGG - chr1_1:19476163-19476182 Msa0012790:CDS 45.0%
GGGGATTTGTAGTAGTATGG+TGG - chr1_1:19476175-19476194 Msa0012790:CDS 45.0%
GGAGGGGATTTGTAGTAGTA+TGG - chr1_1:19476178-19476197 Msa0012790:CDS 45.0%
!! TTGTAGTAGTATGGTGGTGG+AGG - chr1_1:19475977-19475996 Msa0012770:CDS 45.0%
TAGTAAGGTGTGTGGGGAAT+AGG - chr1_1:19476307-19476326 Msa0012790:intron 45.0%
GGTGGAGACTTGTAGTAGTA+AGG - chr1_1:19476322-19476341 Msa0012790:intron 45.0%
ATGTGGGTGAGGATATGCAA+CGG - chr1_1:19476395-19476414 Msa0012790:intron 45.0%
CACAATCAATGAGTGGTGGT+AGG - chr1_1:19476419-19476438 Msa0012790:intron 45.0%
! ACCACCACTCATTGATTGTG+AGG + chr1_1:19476419-19476438 Msa0012780:CDS 45.0%
! CCACCACTCATTGATTGTGA+GGG + chr1_1:19476420-19476439 Msa0012780:CDS 45.0%
CTACCCTCACAATCAATGAG+TGG - chr1_1:19476426-19476445 Msa0012790:intron 45.0%
ACAGCTTCAGATGCTATGAC+TGG + chr1_1:19476458-19476477 Msa0012780:CDS 45.0%
CAGCTTCAGATGCTATGACT+GGG + chr1_1:19476459-19476478 Msa0012780:CDS 45.0%
ATATGGTTCCACGGTGTGTA+AGG + chr1_1:19477130-19477149 Msa0012780:CDS 45.0%
ACCCTTAGGTGGAGCATAAA+GGG - chr1_1:19477159-19477178 Msa0012790:intron 45.0%
AACCCTTAGGTGGAGCATAA+AGG - chr1_1:19477160-19477179 Msa0012790:intron 45.0%
ATGTTGAAGGGTGAACCCTT+AGG - chr1_1:19477173-19477192 Msa0012790:intron 45.0%
CAAGTACGAGGTTGTACTCA+AGG + chr1_1:19477241-19477260 Msa0012780:CDS 45.0%
!! TAAGGAGTTGGTGAAGGCTT+AGG - chr1_1:19477317-19477336 Msa0012790:intron 45.0%
! GGGGGTGATTTGTAGTAGTA+AGG - chr1_1:19476082-19476101 Msa0012790:CDS 45.0%
GTTGTACTTGTAAACCGGTG+AGG - chr1_1:19477363-19477382 Msa0012790:CDS 45.0%
GGCGAGTTGTACTTGTAAAC+CGG - chr1_1:19477368-19477387 Msa0012790:CDS 45.0%
!! GAATAATAATGGACGGGTGG+TGG - chr1_1:19477392-19477411 Msa0012790:CDS 45.0%
!! GGTGAATAATAATGGACGGG+TGG - chr1_1:19477395-19477414 Msa0012790:CDS 45.0%
!! GGCGGTGAATAATAATGGAC+GGG - chr1_1:19477398-19477417 Msa0012790:CDS 45.0%
! GGGGGTGACTTGTAGTAATA+TGG - chr1_1:19477419-19477438 Msa0012790:CDS 45.0%
TTGTACTTGTAAACCGGTGC+CGG - chr1_1:19477494-19477513 Msa0012790:CDS 45.0%
GGGGAGTTGTACTTGTAAAC+CGG - chr1_1:19477500-19477519 Msa0012790:CDS 45.0%
!! GAATAATAATGGACCGGTGG+AGG - chr1_1:19477524-19477543 Msa0012790:CDS 45.0%
!! GGTGAATAATAATGGACCGG+TGG - chr1_1:19477527-19477546 Msa0012790:CDS 45.0%
GGTGACTTATAGGTGTATGG+AGG - chr1_1:19477548-19477567 Msa0012790:CDS 45.0%
GGAGGTGACTTATAGGTGTA+TGG - chr1_1:19477551-19477570 Msa0012790:CDS 45.0%
! TACTTGTAAACTGGTGCTGG+AGG - chr1_1:19477623-19477642 Msa0012790:CDS 45.0%
!! GGAGGTGAGTAATAATGGAC+CGG - chr1_1:19477662-19477681 Msa0012790:CDS 45.0%
GGTGACTTATAGGTGTATGG+AGG - chr1_1:19477548-19477567 Msa0012790:CDS 45.0%
GGAGGTGACTTATAGGTGTA+TGG - chr1_1:19477551-19477570 Msa0012790:CDS 45.0%
CTGTACTTGTAAACTGGTGC+GGG - chr1_1:19477758-19477777 Msa0012790:CDS 45.0%
GCTGTACTTGTAAACTGGTG+CGG - chr1_1:19477759-19477778 Msa0012790:CDS 45.0%
GGTGAGCTGTACTTGTAAAC+TGG - chr1_1:19477764-19477783 Msa0012790:CDS 45.0%
!! TAATAATGGACTGGTGGAGG+TGG - chr1_1:19477785-19477804 Msa0012790:CDS 45.0%
! GGTGACTTGTAGGTATATGG+AGG - chr1_1:19477812-19477831 Msa0012790:CDS 45.0%
! GGAGGTGACTTGTAGGTATA+TGG - chr1_1:19477815-19477834 Msa0012790:CDS 45.0%
TTGTACTTGTAAACCGGTGC+GGG - chr1_1:19477494-19477513 Msa0012790:CDS 45.0%
GTTGTACTTGTAAACCGGTG+CGG - chr1_1:19477363-19477382 Msa0012790:CDS 45.0%
!! GAATAATAATGGACCGGTGG+AGG - chr1_1:19477524-19477543 Msa0012790:CDS 45.0%
!! GGAGAATAATAATGGACCGG+TGG - chr1_1:19477920-19477939 Msa0012790:CDS 45.0%
! GGTGACTTGTAGTAGTATGG+AGG - chr1_1:19477941-19477960 Msa0012790:CDS 45.0%
! GGTGGTGACTTGTAGTAGTA+TGG - chr1_1:19477944-19477963 Msa0012790:CDS 45.0%
! TTGTAGTAGTATGGTGGAGG+AGG - chr1_1:19477983-19478002 Msa0012790:CDS 45.0%
GACTTGTAGTAGTATGGTGG+AGG - chr1_1:19475980-19475999 Msa0012770:CDS 45.0%
TGTACAATCTCTTTGGGTGG+GGG - chr1_1:19478061-19478080 Msa0012790:CDS 45.0%
GTGTACAATCTCTTTGGGTG+GGG - chr1_1:19478062-19478081 Msa0012790:CDS 45.0%
GGTGTACAATCTCTTTGGGT+GGG - chr1_1:19478063-19478082 Msa0012790:CDS 45.0%
! GGAGGGTGTACAATCTCTTT+GGG - chr1_1:19478067-19478086 Msa0012790:CDS 45.0%
! TGGAGGGTGTACAATCTCTT+TGG - chr1_1:19478068-19478087 Msa0012790:CDS 45.0%
TGTACAATCTCTTTGGGTGG+GGG - chr1_1:19478061-19478080 Msa0012790:CDS 45.0%
GTGTACAATCTCTTTGGGTG+GGG - chr1_1:19478062-19478081 Msa0012790:CDS 45.0%
GGTGTACAATCTCTTTGGGT+GGG - chr1_1:19478063-19478082 Msa0012790:CDS 45.0%
! GGAGGGTGTACAATCTCTTT+GGG - chr1_1:19478067-19478086 Msa0012790:CDS 45.0%
! TGGAGGGTGTACAATCTCTT+TGG - chr1_1:19478068-19478087 Msa0012790:CDS 45.0%
TGTACAATCTCTTTGGGTGG+GGG - chr1_1:19478061-19478080 Msa0012790:CDS 45.0%
GTGTACAATCTCTTTGGGTG+GGG - chr1_1:19478062-19478081 Msa0012790:CDS 45.0%
GGTGTACAATCTCTTTGGGT+GGG - chr1_1:19478063-19478082 Msa0012790:CDS 45.0%
! GGAGGGTGTACAATCTCTTT+GGG - chr1_1:19478067-19478086 Msa0012790:CDS 45.0%
! TGGAGGGTGTACAATCTCTT+TGG - chr1_1:19478068-19478087 Msa0012790:CDS 45.0%
! ATAGTAGTATGGTGGAGGAG+GGG - chr1_1:19478509-19478528 Msa0012790:CDS 45.0%
! ATAGTAGTATGGTGGAGGAG+GGG - chr1_1:19478509-19478528 Msa0012790:CDS 45.0%
GGGGACTTATAGTAGTATGG+TGG - chr1_1:19478565-19478584 Msa0012790:CDS 45.0%
GGTGGGGACTTATAGTAGTA+TGG - chr1_1:19478568-19478587 Msa0012790:CDS 45.0%
!! TAGTAAGGTGGTAGTGGAGA+TGG - chr1_1:19478601-19478620 Msa0012790:CDS 45.0%
! GTAATAGTATGGTGGAGGAG+GGG - chr1_1:19478653-19478672 None:intergenic 45.0%
GGGGACTTGTAATAGTATGG+TGG - chr1_1:19478661-19478680 None:intergenic 45.0%
GGTGGGGACTTGTAATAGTA+TGG - chr1_1:19478664-19478683 None:intergenic 45.0%
TATTTCCTTAGGTGGAGGTG+GGG - chr1_1:19478680-19478699 None:intergenic 45.0%
GATATTTCCTTAGGTGGAGG+TGG - chr1_1:19478682-19478701 None:intergenic 45.0%
TGTAATAGTATGGAGGGGGA+GGG - chr1_1:19478750-19478769 None:intergenic 45.0%
TTGTAATAGTATGGAGGGGG+AGG - chr1_1:19478751-19478770 None:intergenic 45.0%
TTGTAATAGTAGGGAGGTGG+TGG - chr1_1:19478799-19478818 None:intergenic 45.0%
GATTTGTAGTAATAGGGGGG+TGG - chr1_1:19478850-19478869 None:intergenic 45.0%
! TGATAGTGATAAGGAGGTGG+TGG - chr1_1:19478991-19479010 None:intergenic 45.0%
GTAGTAGGGAGGATGAGAAA+TGG - chr1_1:19479034-19479053 None:intergenic 45.0%
GGAGGGGATTTGTAGTAGTA+GGG - chr1_1:19476178-19476197 Msa0012790:CDS 45.0%
TGGAGGGGATTTGTAGTAGT+AGG - chr1_1:19479049-19479068 None:intergenic 45.0%
TAAGGCCAGTAGCCCCAAAA+GGG + chr1_1:19475335-19475354 Msa0012780:CDS 50.0%
! GCCAGTTATGACCCCTTTTG+GGG - chr1_1:19475350-19475369 Msa0012770:three_prime_UTR 50.0%
! GGCCAGTTATGACCCCTTTT+GGG - chr1_1:19475351-19475370 Msa0012770:three_prime_UTR 50.0%
! TGGCCAGTTATGACCCCTTT+TGG - chr1_1:19475352-19475371 Msa0012770:three_prime_UTR 50.0%
TAACTGGCCACCAATGGCAA+TGG + chr1_1:19475362-19475381 Msa0012780:CDS 50.0%
ATGGCCAATGCCATTGCCAT+TGG - chr1_1:19475375-19475394 Msa0012770:three_prime_UTR 50.0%
ATCTGCAGCAGCAGAAACCA+TGG - chr1_1:19475415-19475434 Msa0012770:three_prime_UTR 50.0%
! TTGTACTCGTAAGGTGGTGG+AGG - chr1_1:19475456-19475475 Msa0012770:three_prime_UTR 50.0%
GACTTGTACTCGTAAGGTGG+TGG - chr1_1:19475459-19475478 Msa0012770:three_prime_UTR 50.0%
! GGTGACTTGTACTCGTAAGG+TGG - chr1_1:19475462-19475481 Msa0012770:three_prime_UTR 50.0%
! GGTGGTGACTTGTACTCGTA+AGG - chr1_1:19475465-19475484 Msa0012770:three_prime_UTR 50.0%
! ACATAAGGAGGTGGTGGTGA+AGG - chr1_1:19475498-19475517 Msa0012770:three_prime_UTR 50.0%
!! TCATATGGTGGTGGAGGTGA+CGG - chr1_1:19475546-19475565 Msa0012770:three_prime_UTR 50.0%
!! TTGTGCTCATATGGTGGTGG+AGG - chr1_1:19475552-19475571 Msa0012770:three_prime_UTR 50.0%
TCCACCACCATATGAGCACA+AGG + chr1_1:19475551-19475570 Msa0012780:CDS 50.0%
! ACATAAGGAGGTGGTGGTGA+AGG - chr1_1:19475498-19475517 Msa0012770:three_prime_UTR 50.0%
GTACACATATGGAGGTGGTG+GGG - chr1_1:19475667-19475686 Msa0012770:CDS 50.0%
! TGTAGTAGTATGGTGGGGGT+GGG - chr1_1:19475716-19475735 Msa0012770:intron 50.0%
! TTGTAGTAGTATGGTGGGGG+TGG - chr1_1:19475717-19475736 Msa0012770:intron 50.0%
!! TAGTAAGGTGGTGGAGGTGA+AGG - chr1_1:19475759-19475778 Msa0012770:intron 50.0%
TAATATGGAGGTGGGGGTGA+TGG - chr1_1:19475855-19475874 Msa0012770:intron 50.0%
GTGTATATATGGGGGTGGAG+GGG - chr1_1:19475906-19475925 Msa0012770:intron 50.0%
!! TAGTATGGTGGTGGAGGAGA+TGG - chr1_1:19475971-19475990 Msa0012770:CDS 50.0%
GGGGGAGACTTGTAGTAGTA+TGG - chr1_1:19475986-19476005 Msa0012770:CDS 50.0%
!! TAGTATGGTGGTGGAGGAGA+TGG - chr1_1:19475971-19475990 Msa0012770:CDS 50.0%
GTATGGGGAATAGGAGATGG+AGG - chr1_1:19476058-19476077 None:intergenic 50.0%
GGTGTATGGGGAATAGGAGA+TGG - chr1_1:19476061-19476080 None:intergenic 50.0%
!! TAGTATGGTGGTGGAGGAGA+TGG - chr1_1:19475971-19475990 Msa0012770:CDS 50.0%
TGGTGGAGAAGATGGTGAAG+GGG - chr1_1:19476155-19476174 Msa0012790:CDS 50.0%
! GTGGTGGAGAAGATGGTGAA+GGG - chr1_1:19476156-19476175 Msa0012790:CDS 50.0%
AATAGGAGATGGAGGAGGAG+GGG - chr1_1:19476050-19476069 None:intergenic 50.0%
GAATAGGAGATGGAGGAGGA+GGG - chr1_1:19476051-19476070 None:intergenic 50.0%
GTATGGGGAATAGGAGATGG+AGG - chr1_1:19476058-19476077 None:intergenic 50.0%
GGTGTATGGGGAATAGGAGA+TGG - chr1_1:19476061-19476080 None:intergenic 50.0%
!! TAGTATGGTGGTGGAGGAGA+TGG - chr1_1:19475971-19475990 Msa0012770:CDS 50.0%
TGTGGGGAATAGGAGATGGA+GGG - chr1_1:19476297-19476316 Msa0012790:intron 50.0%
! TATGGTGGAGGAAGGACCTT+GGG - chr1_1:19476349-19476368 Msa0012790:intron 50.0%
TGTGGGTGAGGATATGCAAC+GGG - chr1_1:19476394-19476413 Msa0012790:intron 50.0%
ATGAGTGGTGGTAGGGATGT+GGG - chr1_1:19476411-19476430 Msa0012790:intron 50.0%
AATGAGTGGTGGTAGGGATG+TGG - chr1_1:19476412-19476431 Msa0012790:intron 50.0%
CCCTCACAATCAATGAGTGG+TGG - chr1_1:19476423-19476442 Msa0012790:intron 50.0%
GTTGAGGTGACATGCAAAGC+CGG + chr1_1:19477026-19477045 Msa0012780:CDS 50.0%
TTGAGGTGACATGCAAAGCC+GGG + chr1_1:19477027-19477046 Msa0012780:CDS 50.0%
! AGCCTTGACGATTTTGCTCC+CGG - chr1_1:19477048-19477067 Msa0012790:intron 50.0%
TGCCCTTTATGCTCCACCTA+AGG + chr1_1:19477154-19477173 Msa0012780:CDS 50.0%
GCCCTTTATGCTCCACCTAA+GGG + chr1_1:19477155-19477174 Msa0012780:CDS 50.0%
TTGAAGGGTGAACCCTTAGG+TGG - chr1_1:19477170-19477189 Msa0012790:intron 50.0%
TACTTGTAAACCGGTGAGGG+AGG - chr1_1:19477359-19477378 Msa0012790:CDS 50.0%
!! TAATAATGGACGGGTGGTGG+TGG - chr1_1:19477389-19477408 Msa0012790:CDS 50.0%
!! AATAATGGACCGGTGGAGGT+GGG - chr1_1:19477520-19477539 Msa0012790:CDS 50.0%
!! TAATAATGGACCGGTGGAGG+TGG - chr1_1:19477521-19477540 Msa0012790:CDS 50.0%
!! AGTTGGTGCTGCTTTCACAG+GGG - chr1_1:19477576-19477595 Msa0012790:intron 50.0%
!! GAGTTGGTGCTGCTTTCACA+GGG - chr1_1:19477577-19477596 Msa0012790:intron 50.0%
! TTGTAAACTGGTGCTGGAGG+TGG - chr1_1:19477620-19477639 Msa0012790:CDS 50.0%
!! TAATAATGGACCGGTGGAGG+TGG - chr1_1:19477521-19477540 Msa0012790:CDS 50.0%
!! GAGTAATAATGGACCGGTGG+AGG - chr1_1:19477656-19477675 Msa0012790:CDS 50.0%
!! GGTGAGTAATAATGGACCGG+TGG - chr1_1:19477659-19477678 Msa0012790:CDS 50.0%
TACTTGTAAACTGGTGCGGG+AGG - chr1_1:19477755-19477774 Msa0012790:CDS 50.0%
!! TAATAATGGACCGGTGGAGG+TGG - chr1_1:19477521-19477540 Msa0012790:CDS 50.0%
! TAGTATGGTGGAGGAGGTGA+TGG - chr1_1:19477977-19477996 Msa0012790:CDS 50.0%
GGGGACTTGTAGTAGTATGG+TGG - chr1_1:19477989-19478008 Msa0012790:CDS 50.0%
GGTGGGGACTTGTAGTAGTA+TGG - chr1_1:19477992-19478011 Msa0012790:CDS 50.0%
TAATAAGGTGGAGGAGGGGA+TGG - chr1_1:19478025-19478044 Msa0012790:CDS 50.0%
GGGTGTACAATCTCTTTGGG+TGG - chr1_1:19478064-19478083 Msa0012790:CDS 50.0%
! AGTATGGTGGAGGAGGTGAT+GGG - chr1_1:19477976-19477995 Msa0012790:CDS 50.0%
! TAGTATGGTGGAGGAGGTGA+TGG - chr1_1:19477977-19477996 Msa0012790:CDS 50.0%
TAATAAGGTGGAGGAGGGGA+TGG - chr1_1:19478025-19478044 Msa0012790:CDS 50.0%
GGGTGTACAATCTCTTTGGG+TGG - chr1_1:19478064-19478083 Msa0012790:CDS 50.0%
! AGTATGGTGGAGGAGGTGAT+GGG - chr1_1:19477976-19477995 Msa0012790:CDS 50.0%
! TAGTATGGTGGAGGAGGTGA+TGG - chr1_1:19477977-19477996 Msa0012790:CDS 50.0%
TAATAAGGTGGAGGAGGGGA+TGG - chr1_1:19478025-19478044 Msa0012790:CDS 50.0%
GGGTGTACAATCTCTTTGGG+TGG - chr1_1:19478064-19478083 Msa0012790:CDS 50.0%
! AGTATGGTGGAGGAGGTGAT+GGG - chr1_1:19477976-19477995 Msa0012790:CDS 50.0%
! TAGTATGGTGGAGGAGGTGA+TGG - chr1_1:19477977-19477996 Msa0012790:CDS 50.0%
!! TAGTATGGTGGTGGTGGAGA+TGG - chr1_1:19478457-19478476 Msa0012790:CDS 50.0%
GTAATAGTATGGAGGGGGAG+GGG - chr1_1:19478749-19478768 None:intergenic 50.0%
TTGTAGTAATAGGGGGGTGG+AGG - chr1_1:19478847-19478866 None:intergenic 50.0%
TGTAATAGTAGGGAGGGGGT+GGG - chr1_1:19478894-19478913 None:intergenic 50.0%
TTGTAATAGTAGGGAGGGGG+TGG - chr1_1:19478895-19478914 None:intergenic 50.0%
!! TGATAAGGAGGTGGTGGAGA+TGG - chr1_1:19478985-19479004 None:intergenic 50.0%
! TGAGAAATGGGAGATGGTGG+AGG - chr1_1:19479021-19479040 None:intergenic 50.0%
GGATGAGAAATGGGAGATGG+TGG - chr1_1:19479024-19479043 None:intergenic 50.0%
GGAGGATGAGAAATGGGAGA+TGG - chr1_1:19479027-19479046 None:intergenic 50.0%
GGGGATTTGTAGTAGTAGGG+AGG - chr1_1:19479045-19479064 None:intergenic 50.0%
ACATAGTGGTAAGGAGGTGG+AGG - chr1_1:19479087-19479106 None:intergenic 50.0%
CTCACATAGTGGTAAGGAGG+TGG - chr1_1:19479090-19479109 None:intergenic 50.0%
GGACTCACATAGTGGTAAGG+AGG - chr1_1:19479093-19479112 None:intergenic 50.0%
GGAGGACTCACATAGTGGTA+AGG - chr1_1:19479096-19479115 None:intergenic 50.0%
TGGAGGTGACTTTACTGGTG+GGG - chr1_1:19479118-19479137 None:intergenic 50.0%
GTGGAGGTGACTTTACTGGT+GGG - chr1_1:19479119-19479138 None:intergenic 50.0%
!! GATGGTGGAGGTGACTTTAC+TGG - chr1_1:19479123-19479142 None:intergenic 50.0%
! TAGTTGTAGTGAGGTGGTGG+TGG - chr1_1:19479165-19479184 None:intergenic 50.0%
CTAAGGCCAGTAGCCCCAAA+AGG + chr1_1:19475334-19475353 Msa0012780:CDS 55.0%
AAGGCCAGTAGCCCCAAAAG+GGG + chr1_1:19475336-19475355 Msa0012780:CDS 55.0%
!!! ATGACCCCTTTTGGGGCTAC+TGG - chr1_1:19475343-19475362 Msa0012770:three_prime_UTR 55.0%
GCCCCAAAAGGGGTCATAAC+TGG + chr1_1:19475346-19475365 Msa0012780:CDS 55.0%
GGGTCATAACTGGCCACCAA+TGG + chr1_1:19475356-19475375 Msa0012780:CDS 55.0%
GCCACCAATGGCAATGGCAT+TGG + chr1_1:19475368-19475387 Msa0012780:CDS 55.0%
GCCAATGCCATTGCCATTGG+TGG - chr1_1:19475372-19475391 Msa0012770:three_prime_UTR 55.0%
!! ATATGGTGGTGGAGGTGACG+GGG - chr1_1:19475544-19475563 Msa0012770:three_prime_UTR 55.0%
!! CATATGGTGGTGGAGGTGAC+GGG - chr1_1:19475545-19475564 Msa0012770:three_prime_UTR 55.0%
GCCTTGTGCTCATATGGTGG+TGG - chr1_1:19475555-19475574 Msa0012770:three_prime_UTR 55.0%
! GGAGCCTTGTGCTCATATGG+TGG - chr1_1:19475558-19475577 Msa0012770:three_prime_UTR 55.0%
! GCAGGAGCCTTGTGCTCATA+TGG - chr1_1:19475561-19475580 Msa0012770:three_prime_UTR 55.0%
!! ACATATGGAGGTGGTGGGGA+AGG - chr1_1:19475663-19475682 Msa0012770:CDS 55.0%
! GTAGTAGTATGGTGGGGGTG+GGG - chr1_1:19475715-19475734 Msa0012770:intron 55.0%
!! TAGTATGGTGGTGGAGGGGA+AGG - chr1_1:19475807-19475826 Msa0012770:intron 55.0%
ATATATGGGGGTGGAGGGGA+TGG - chr1_1:19475902-19475921 Msa0012770:intron 55.0%
! AGATGGTGAAGGTGGTGGTG+GGG - chr1_1:19475954-19475973 Msa0012770:CDS 55.0%
! GAGATGGTGAAGGTGGTGGT+GGG - chr1_1:19475955-19475974 Msa0012770:CDS 55.0%
TGGTGGAGGAGATGGTGAAG+GGG - chr1_1:19475963-19475982 Msa0012770:CDS 55.0%
! GTGGTGGAGGAGATGGTGAA+GGG - chr1_1:19475964-19475983 Msa0012770:CDS 55.0%
GGAATAGGAGATGGAGGAGG+AGG - chr1_1:19476052-19476071 None:intergenic 55.0%
TGGGGAATAGGAGATGGAGG+AGG - chr1_1:19476055-19476074 None:intergenic 55.0%
TGGTGGAGGAGATGGTGAAG+GGG - chr1_1:19475963-19475982 Msa0012770:CDS 55.0%
! GTGGTGGAGGAGATGGTGAA+GGG - chr1_1:19475964-19475983 Msa0012770:CDS 55.0%
AGAAGATGGTGAAGGGGGTG+GGG - chr1_1:19476149-19476168 Msa0012790:CDS 55.0%
GAGAAGATGGTGAAGGGGGT+GGG - chr1_1:19476150-19476169 Msa0012790:CDS 55.0%
GGTGGAGAAGATGGTGAAGG+GGG - chr1_1:19476154-19476173 Msa0012790:CDS 55.0%
!! GGTGGTGGAGAAGATGGTGA+AGG - chr1_1:19476157-19476176 Msa0012790:CDS 55.0%
GGAATAGGAGATGGAGGAGG+AGG - chr1_1:19476052-19476071 None:intergenic 55.0%
TGGGGAATAGGAGATGGAGG+AGG - chr1_1:19476055-19476074 None:intergenic 55.0%
TGGGGAATAGGAGATGGAGG+GGG - chr1_1:19476055-19476074 None:intergenic 55.0%
GTGGGGAATAGGAGATGGAG+GGG - chr1_1:19476296-19476315 Msa0012790:intron 55.0%
GTGTGGGGAATAGGAGATGG+AGG - chr1_1:19476298-19476317 Msa0012790:intron 55.0%
GGTGTGTGGGGAATAGGAGA+TGG - chr1_1:19476301-19476320 Msa0012790:intron 55.0%
! GTATGGTGGAGGAAGGACCT+TGG - chr1_1:19476350-19476369 Msa0012790:intron 55.0%
TGAGGATATGCAACGGGTGG+AGG - chr1_1:19476388-19476407 Msa0012790:intron 55.0%
AGCCGGGAGCAAAATCGTCA+AGG + chr1_1:19477043-19477062 Msa0012780:CDS 55.0%
TGTAAACCGGTGAGGGAGGT+GGG - chr1_1:19477355-19477374 Msa0012790:CDS 55.0%
TTGTAAACCGGTGAGGGAGG+TGG - chr1_1:19477356-19477375 Msa0012790:CDS 55.0%
!! AGTTGGTGCCGCTTTCACAG+GGG - chr1_1:19477444-19477463 Msa0012790:CDS 55.0%
!! GAGTTGGTGCCGCTTTCACA+GGG - chr1_1:19477445-19477464 Msa0012790:CDS 55.0%
CTACAAATCACCTCCCCCAC+CGG + chr1_1:19477472-19477491 Msa0012780:CDS 55.0%
!! ACTTGTAAACCGGTGCCGGT+GGG - chr1_1:19477490-19477509 Msa0012790:CDS 55.0%
! TACTTGTAAACCGGTGCCGG+TGG - chr1_1:19477491-19477510 Msa0012790:CDS 55.0%
!! ATAATGGACCGGTGGAGGTG+GGG - chr1_1:19477519-19477538 Msa0012790:CDS 55.0%
AGGGGGAGGAGGTGACTTAT+AGG - chr1_1:19477558-19477577 Msa0012790:intron 55.0%
!! GTTGGTGCTGCTTTCACAGG+GGG - chr1_1:19477575-19477594 Msa0012790:intron 55.0%
!! GGAGTTGGTGCTGCTTTCAC+AGG - chr1_1:19477578-19477597 Msa0012790:intron 55.0%
! TAAACTGGTGCTGGAGGTGG+AGG - chr1_1:19477617-19477636 Msa0012790:CDS 55.0%
GTACAACTCTCCACCTCCAC+CGG + chr1_1:19477640-19477659 Msa0012780:CDS 55.0%
AGGGGGAGGAGGTGACTTAT+AGG - chr1_1:19477558-19477577 Msa0012790:intron 55.0%
!! AGTTGGTGCCGCTTTCACAG+GGG - chr1_1:19477444-19477463 Msa0012790:CDS 55.0%
!! GAGTTGGTGCCGCTTTCACA+GGG - chr1_1:19477445-19477464 Msa0012790:CDS 55.0%
TTGTAAACTGGTGCGGGAGG+TGG - chr1_1:19477752-19477771 Msa0012790:CDS 55.0%
!! AGTTGGTGCCGCTTTCACAG+GGG - chr1_1:19477444-19477463 Msa0012790:CDS 55.0%
!! GAGTTGGTGCCGCTTTCACA+GGG - chr1_1:19477445-19477464 Msa0012790:CDS 55.0%
TACTTGTAAACCGGTGCGGG+TGG - chr1_1:19477884-19477903 Msa0012790:CDS 55.0%
GTACAACTCACCACCTCCAC+CGG + chr1_1:19477901-19477920 Msa0012780:CDS 55.0%
!! AGGAGGTGATGGTGATGGTG+GGG - chr1_1:19477966-19477985 Msa0012790:CDS 55.0%
!! GAGGAGGTGATGGTGATGGT+GGG - chr1_1:19477967-19477986 Msa0012790:CDS 55.0%
ACAATCTCTTTGGGTGGGGG+AGG - chr1_1:19478058-19478077 Msa0012790:CDS 55.0%
! GTATGGTGGAGGAGGTGATG+GGG - chr1_1:19477975-19477994 Msa0012790:CDS 55.0%
ACAATCTCTTTGGGTGGGGG+AGG - chr1_1:19478058-19478077 Msa0012790:CDS 55.0%
! GTATGGTGGAGGAGGTGATG+GGG - chr1_1:19477975-19477994 Msa0012790:CDS 55.0%
ACAATCTCTTTGGGTGGGGG+AGG - chr1_1:19478058-19478077 Msa0012790:CDS 55.0%
! GTATGGTGGAGGAGGTGATG+GGG - chr1_1:19477975-19477994 Msa0012790:CDS 55.0%
! AGTATGGTGGAGGAGGGGAT+GGG - chr1_1:19478504-19478523 Msa0012790:CDS 55.0%
! TAGTATGGTGGAGGAGGGGA+TGG - chr1_1:19478505-19478524 Msa0012790:CDS 55.0%
! AGTATGGTGGAGGAGGGGAT+GGG - chr1_1:19478504-19478523 Msa0012790:CDS 55.0%
! TAGTATGGTGGAGGAGGGGA+TGG - chr1_1:19478505-19478524 Msa0012790:CDS 55.0%
!! AGATGGTGATGGAGGAGGTG+GGG - chr1_1:19478584-19478603 Msa0012790:CDS 55.0%
!! GAGATGGTGATGGAGGAGGT+GGG - chr1_1:19478585-19478604 Msa0012790:CDS 55.0%
!! AGTGGAGATGGTGATGGAGG+AGG - chr1_1:19478589-19478608 Msa0012790:CDS 55.0%
!! GGTAGTGGAGATGGTGATGG+AGG - chr1_1:19478592-19478611 Msa0012790:CDS 55.0%
!! GGTGGTAGTGGAGATGGTGA+TGG - chr1_1:19478595-19478614 Msa0012790:CDS 55.0%
! AGTATGGTGGAGGAGGGGAT+GGG - chr1_1:19478504-19478523 Msa0012790:CDS 55.0%
! TAGTATGGTGGAGGAGGGGA+TGG - chr1_1:19478505-19478524 Msa0012790:CDS 55.0%
! TAGTAGGGAGGTGGTGGTGA+TGG - chr1_1:19478793-19478812 None:intergenic 55.0%
AATAGGGGGGTGGAGGAGAT+GGG - chr1_1:19478840-19478859 None:intergenic 55.0%
TAATAGGGGGGTGGAGGAGA+TGG - chr1_1:19478841-19478860 None:intergenic 55.0%
GTAATAGTAGGGAGGGGGTG+GGG - chr1_1:19478893-19478912 None:intergenic 55.0%
! TAGTAAGGAGGTGGCGGTGA+TGG - chr1_1:19478937-19478956 None:intergenic 55.0%
!! AGGTGGTGGAGATGGAGATG+GGG - chr1_1:19478977-19478996 None:intergenic 55.0%
!! GAGGTGGTGGAGATGGAGAT+GGG - chr1_1:19478978-19478997 None:intergenic 55.0%
!! GAAATGGGAGATGGTGGAGG+AGG - chr1_1:19479018-19479037 None:intergenic 55.0%
TGGTAAGGAGGTGGAGGAGA+CGG - chr1_1:19479081-19479100 None:intergenic 55.0%
GGAGGTGACTTTACTGGTGG+GGG - chr1_1:19479117-19479136 None:intergenic 55.0%
GGTGGAGGTGACTTTACTGG+TGG - chr1_1:19479120-19479139 None:intergenic 55.0%
! GGAGGTGGTGGTGAAGGTGA+CGG - chr1_1:19475492-19475511 Msa0012770:three_prime_UTR 60.0%
!! GGTGAAGGAGTTGGTGGTGG+TGG - chr1_1:19475600-19475619 Msa0012770:three_prime_UTR 60.0%
!! GGTGGTGAAGGAGTTGGTGG+TGG - chr1_1:19475603-19475622 Msa0012770:three_prime_UTR 60.0%
! GGTGGTGGTGAAGGAGTTGG+TGG - chr1_1:19475606-19475625 Msa0012770:three_prime_UTR 60.0%
! GGAGGTGGTGGTGAAGGAGT+TGG - chr1_1:19475609-19475628 Msa0012770:three_prime_UTR 60.0%
! TAGTATGGTGGGGGTGGGGA+AGG - chr1_1:19475711-19475730 Msa0012770:intron 60.0%
! GGTGAAGGAGAAGGTGGTGG+AGG - chr1_1:19475744-19475763 Msa0012770:intron 60.0%
GGAGGTGAAGGAGAAGGTGG+TGG - chr1_1:19475747-19475766 Msa0012770:intron 60.0%
GGTGGAGGTGAAGGAGAAGG+TGG - chr1_1:19475750-19475769 Msa0012770:intron 60.0%
!! GGTGGTGGAGGTGAAGGAGA+AGG - chr1_1:19475753-19475772 Msa0012770:intron 60.0%
!! GGTGATGGAGATGGTGGTGG+TGG - chr1_1:19475840-19475859 Msa0012770:intron 60.0%
! GGAGATGGTGAAGGTGGTGG+TGG - chr1_1:19475956-19475975 Msa0012770:CDS 60.0%
GGAGGAGATGGTGAAGGTGG+TGG - chr1_1:19475959-19475978 Msa0012770:CDS 60.0%
GGTGGAGGAGATGGTGAAGG+TGG - chr1_1:19475962-19475981 Msa0012770:CDS 60.0%
!! GGTGGTGGAGGAGATGGTGA+AGG - chr1_1:19475965-19475984 Msa0012770:CDS 60.0%
AGGAGATGGTGAAGGGGGTG+GGG - chr1_1:19476005-19476024 Msa0012770:CDS 60.0%
GAGGAGATGGTGAAGGGGGT+GGG - chr1_1:19476006-19476025 Msa0012770:CDS 60.0%
GGTGGAGGAGATGGTGAAGG+GGG - chr1_1:19475962-19475981 Msa0012770:CDS 60.0%
!! GGTGGTGGAGGAGATGGTGA+AGG - chr1_1:19475965-19475984 Msa0012770:CDS 60.0%
AGGAGATGGTGAAGGGGGTG+GGG - chr1_1:19476005-19476024 Msa0012770:CDS 60.0%
GAGGAGATGGTGAAGGGGGT+GGG - chr1_1:19476006-19476025 Msa0012770:CDS 60.0%
GGTGGAGGAGATGGTGAAGG+GGG - chr1_1:19475962-19475981 Msa0012770:CDS 60.0%
!! GGTGGTGGAGGAGATGGTGA+AGG - chr1_1:19475965-19475984 Msa0012770:CDS 60.0%
GAAGATGGTGAAGGGGGTGG+GGG - chr1_1:19476148-19476167 Msa0012790:CDS 60.0%
GGAGAAGATGGTGAAGGGGG+TGG - chr1_1:19476151-19476170 Msa0012790:CDS 60.0%
! GGAGATGGTGAAGGTGGTGG+AGG - chr1_1:19475956-19475975 Msa0012770:CDS 60.0%
GGAGGAGATGGTGAAGGTGG+TGG - chr1_1:19475959-19475978 Msa0012770:CDS 60.0%
GGTGGAGGAGATGGTGAAGG+TGG - chr1_1:19475962-19475981 Msa0012770:CDS 60.0%
!! GGTGGTGGAGGAGATGGTGA+AGG - chr1_1:19475965-19475984 Msa0012770:CDS 60.0%
GGAATAGGAGATGGAGGGGG+AGG - chr1_1:19476292-19476311 Msa0012790:intron 60.0%
CAAGTCTCCACCACCACCCA+AGG + chr1_1:19476330-19476349 Msa0012780:CDS 60.0%
GGATATGCAACGGGTGGAGG+AGG - chr1_1:19476385-19476404 Msa0012790:intron 60.0%
GGGTGAGGATATGCAACGGG+TGG - chr1_1:19476391-19476410 Msa0012790:intron 60.0%
TGGTGGTAGGGATGTGGGTG+AGG - chr1_1:19476406-19476425 Msa0012790:intron 60.0%
!! TGGGGCAGGTGCTGTTGTTG+AGG + chr1_1:19477010-19477029 Msa0012780:intron 60.0%
AAGGGCAGCCTTACACACCG+TGG - chr1_1:19477141-19477160 Msa0012790:intron 60.0%
TAAACCGGTGAGGGAGGTGG+GGG - chr1_1:19477353-19477372 Msa0012790:CDS 60.0%
GTAAACCGGTGAGGGAGGTG+GGG - chr1_1:19477354-19477373 Msa0012790:CDS 60.0%
!! GTTGGTGCCGCTTTCACAGG+GGG - chr1_1:19477443-19477462 Msa0012790:CDS 60.0%
!! GGAGTTGGTGCCGCTTTCAC+AGG - chr1_1:19477446-19477465 Msa0012790:CDS 60.0%
!! TTGTAAACCGGTGCCGGTGG+GGG - chr1_1:19477488-19477507 Msa0012790:CDS 60.0%
!! CTTGTAAACCGGTGCCGGTG+GGG - chr1_1:19477489-19477508 Msa0012790:CDS 60.0%
GTACAACTCCCCACCTCCAC+CGG + chr1_1:19477508-19477527 Msa0012780:CDS 60.0%
ACCTCCTCCCCCTGTGAAAG+CGG + chr1_1:19477565-19477584 Msa0012780:CDS 60.0%
!! GTTGGTGCCGCTTTCACAGG+GGG - chr1_1:19477443-19477462 Msa0012790:CDS 60.0%
!! GGAGTTGGTGCCGCTTTCAC+AGG - chr1_1:19477446-19477465 Msa0012790:CDS 60.0%
TAAACTGGTGCGGGAGGTGG+AGG - chr1_1:19477749-19477768 Msa0012790:CDS 60.0%
! CACAGGGGGAGGTGACTTGT+AGG - chr1_1:19477822-19477841 Msa0012790:CDS 60.0%
GTCACCTCCCCCTGTGAAAG+CGG + chr1_1:19477826-19477845 Msa0012780:CDS 60.0%
!! GTTGGTGCCGCTTTCACAGG+GGG - chr1_1:19477443-19477462 Msa0012790:CDS 60.0%
!! GGAGTTGGTGCCGCTTTCAC+AGG - chr1_1:19477446-19477465 Msa0012790:CDS 60.0%
TTGTAAACCGGTGCGGGTGG+TGG - chr1_1:19477881-19477900 Msa0012790:CDS 60.0%
!! GGAGGTGATGGTGATGGTGG+GGG - chr1_1:19477965-19477984 Msa0012790:CDS 60.0%
!! GGAGGAGGTGATGGTGATGG+TGG - chr1_1:19477968-19477987 Msa0012790:CDS 60.0%
! GGTGGAGGAGGTGATGGTGA+TGG - chr1_1:19477971-19477990 Msa0012790:CDS 60.0%
!! GGATGGTGATGGTGGAGGTG+GGG - chr1_1:19478008-19478027 Msa0012790:CDS 60.0%
!! GGGATGGTGATGGTGGAGGT+GGG - chr1_1:19478009-19478028 Msa0012790:CDS 60.0%
!! AGGAGGTGATGGGGATGGTG+GGG - chr1_1:19478110-19478129 Msa0012790:intron 60.0%
!! GAGGAGGTGATGGGGATGGT+GGG - chr1_1:19478111-19478130 Msa0012790:intron 60.0%
!! AGGAGGTGATGGGGATGGTG+GGG - chr1_1:19478110-19478129 Msa0012790:intron 60.0%
!! GAGGAGGTGATGGGGATGGT+GGG - chr1_1:19478111-19478130 Msa0012790:intron 60.0%
!! AGGAGGTGATGGGGATGGTG+GGG - chr1_1:19478110-19478129 Msa0012790:intron 60.0%
!! GAGGAGGTGATGGGGATGGT+GGG - chr1_1:19478111-19478130 Msa0012790:intron 60.0%
!! GGAGATGGTGATGGTGGAGG+TGG - chr1_1:19478442-19478461 Msa0012790:CDS 60.0%
!! GGTGGAGATGGTGATGGTGG+AGG - chr1_1:19478445-19478464 Msa0012790:CDS 60.0%
!! GGTGGTGGAGATGGTGATGG+TGG - chr1_1:19478448-19478467 Msa0012790:CDS 60.0%
!! GGTGGTGGTGGAGATGGTGA+TGG - chr1_1:19478451-19478470 Msa0012790:CDS 60.0%
! GTATGGTGGAGGAGGGGATG+GGG - chr1_1:19478503-19478522 Msa0012790:CDS 60.0%
! GTATGGTGGAGGAGGGGATG+GGG - chr1_1:19478503-19478522 Msa0012790:CDS 60.0%
!! GGAGATGGTGATGGAGGAGG+TGG - chr1_1:19478586-19478605 Msa0012790:CDS 60.0%
! GTATGGTGGAGGAGGGGATG+GGG - chr1_1:19478503-19478522 Msa0012790:CDS 60.0%
CAAGTCCCCACCTCCACCTA+AGG + chr1_1:19478672-19478691 Msa0012780:CDS 60.0%
TAGTATGGAGGGGGAGGGGA+TGG - chr1_1:19478745-19478764 None:intergenic 60.0%
!! GGTGATGGTGATGGTGGTGG+AGG - chr1_1:19478778-19478797 None:intergenic 60.0%
!! GGTGGTGATGGTGATGGTGG+TGG - chr1_1:19478781-19478800 None:intergenic 60.0%
!! GGTGGTGGTGATGGTGATGG+TGG - chr1_1:19478784-19478803 None:intergenic 60.0%
!! GGAGGTGGTGGTGATGGTGA+TGG - chr1_1:19478787-19478806 None:intergenic 60.0%
ATAGGGGGGTGGAGGAGATG+GGG - chr1_1:19478839-19478858 None:intergenic 60.0%
TGGAGATGGAGATGGGGGTG+GGG - chr1_1:19478971-19478990 None:intergenic 60.0%
GTGGAGATGGAGATGGGGGT+GGG - chr1_1:19478972-19478991 None:intergenic 60.0%
!! GGTGGTGGAGATGGAGATGG+GGG - chr1_1:19478976-19478995 None:intergenic 60.0%
!! GGAGGTGGTGGAGATGGAGA+TGG - chr1_1:19478979-19478998 None:intergenic 60.0%
GTGGGGGAGGACTCACATAG+TGG - chr1_1:19479101-19479120 None:intergenic 60.0%
GGTGACTTTACTGGTGGGGG+AGG - chr1_1:19479114-19479133 None:intergenic 60.0%
! GGTGAAGGTGACGGTGGTGG+TGG - chr1_1:19475483-19475502 Msa0012770:three_prime_UTR 65.0%
! GGTGGTGAAGGTGACGGTGG+TGG - chr1_1:19475486-19475505 Msa0012770:three_prime_UTR 65.0%
! GGTGGTGGTGAAGGTGACGG+TGG - chr1_1:19475489-19475508 Msa0012770:three_prime_UTR 65.0%
!! GGTGGTGGAGGGGAAGGTGA+GGG - chr1_1:19475801-19475820 Msa0012770:intron 65.0%
!! TGGTGGTGGAGGGGAAGGTG+AGG - chr1_1:19475802-19475821 Msa0012770:intron 65.0%
!! GGGGGTGATGGAGATGGTGG+TGG - chr1_1:19475843-19475862 Msa0012770:intron 65.0%
!! GGTGGGGGTGATGGAGATGG+TGG - chr1_1:19475846-19475865 Msa0012770:intron 65.0%
!! GGAGGTGGGGGTGATGGAGA+TGG - chr1_1:19475849-19475868 Msa0012770:intron 65.0%
AGGGGATGGTGAGGGTGGTG+GGG - chr1_1:19475888-19475907 Msa0012770:intron 65.0%
GAGGGGATGGTGAGGGTGGT+GGG - chr1_1:19475889-19475908 Msa0012770:intron 65.0%
GGAGATGGTGAAGGGGGTGG+GGG - chr1_1:19476004-19476023 Msa0012770:CDS 65.0%
GGAGGAGATGGTGAAGGGGG+TGG - chr1_1:19476007-19476026 Msa0012770:CDS 65.0%
GGAGATGGTGAAGGGGGTGG+GGG - chr1_1:19476004-19476023 Msa0012770:CDS 65.0%
GGAGGAGATGGTGAAGGGGG+TGG - chr1_1:19476007-19476026 Msa0012770:CDS 65.0%
! GGAAGGACCTTGGGTGGTGG+TGG - chr1_1:19476340-19476359 Msa0012790:intron 65.0%
GGAGGAAGGACCTTGGGTGG+TGG - chr1_1:19476343-19476362 Msa0012790:intron 65.0%
GGTGGAGGAAGGACCTTGGG+TGG - chr1_1:19476346-19476365 Msa0012790:intron 65.0%
ATCACCCCCACCTCCCTCAC+CGG + chr1_1:19477346-19477365 Msa0012780:CDS 65.0%
ACCCCCTCCCCCTGTGAAAG+CGG + chr1_1:19477433-19477452 Msa0012780:CDS 65.0%
!! TGCCGCTTTCACAGGGGGAG+GGG - chr1_1:19477438-19477457 Msa0012790:CDS 65.0%
!! GTGCCGCTTTCACAGGGGGA+GGG - chr1_1:19477439-19477458 Msa0012790:CDS 65.0%
! GCTGCTTTCACAGGGGGAGG+AGG - chr1_1:19477569-19477588 Msa0012790:intron 65.0%
!! GGTGCTGCTTTCACAGGGGG+AGG - chr1_1:19477572-19477591 Msa0012790:intron 65.0%
ATCACCTCCACCACCCGCAC+CGG + chr1_1:19477871-19477890 Msa0012780:CDS 65.0%
! TAAACCGGTGCGGGTGGTGG+AGG - chr1_1:19477878-19477897 Msa0012790:CDS 65.0%
!! GGTGATGGTGATGGTGGGGG+TGG - chr1_1:19477962-19477981 Msa0012790:CDS 65.0%
!! GGGGATGGTGATGGTGGAGG+TGG - chr1_1:19478010-19478029 Msa0012790:CDS 65.0%
!! GGAGGGGATGGTGATGGTGG+AGG - chr1_1:19478013-19478032 Msa0012790:CDS 65.0%
!! GGAGGAGGGGATGGTGATGG+TGG - chr1_1:19478016-19478035 Msa0012790:CDS 65.0%
GGTGGAGGAGGGGATGGTGA+TGG - chr1_1:19478019-19478038 Msa0012790:CDS 65.0%
!! GGAGGTGATGGGGATGGTGG+GGG - chr1_1:19478109-19478128 Msa0012790:intron 65.0%
!! GGAGGAGGTGATGGGGATGG+TGG - chr1_1:19478112-19478131 Msa0012790:intron 65.0%
!! GGTGGAGGAGGTGATGGGGA+TGG - chr1_1:19478115-19478134 Msa0012790:intron 65.0%
!! GGGGATGGTGATGGTGGAGG+TGG - chr1_1:19478010-19478029 Msa0012790:CDS 65.0%
!! GGAGGGGATGGTGATGGTGG+AGG - chr1_1:19478013-19478032 Msa0012790:CDS 65.0%
!! GGAGGAGGGGATGGTGATGG+TGG - chr1_1:19478016-19478035 Msa0012790:CDS 65.0%
GGTGGAGGAGGGGATGGTGA+TGG - chr1_1:19478019-19478038 Msa0012790:CDS 65.0%
!! GGAGGTGATGGGGATGGTGG+GGG - chr1_1:19478109-19478128 Msa0012790:intron 65.0%
!! GGAGGAGGTGATGGGGATGG+TGG - chr1_1:19478112-19478131 Msa0012790:intron 65.0%
!! GGTGGAGGAGGTGATGGGGA+TGG - chr1_1:19478115-19478134 Msa0012790:intron 65.0%
!! GGGGATGGTGATGGTGGAGG+TGG - chr1_1:19478010-19478029 Msa0012790:CDS 65.0%
!! GGAGGGGATGGTGATGGTGG+AGG - chr1_1:19478013-19478032 Msa0012790:CDS 65.0%
!! GGAGGAGGGGATGGTGATGG+TGG - chr1_1:19478016-19478035 Msa0012790:CDS 65.0%
GGTGGAGGAGGGGATGGTGA+TGG - chr1_1:19478019-19478038 Msa0012790:CDS 65.0%
!! GGAGGTGATGGGGATGGTGG+GGG - chr1_1:19478109-19478128 Msa0012790:intron 65.0%
!! GGAGGAGGTGATGGGGATGG+TGG - chr1_1:19478112-19478131 Msa0012790:intron 65.0%
!! GGTGGAGGAGGTGATGGGGA+TGG - chr1_1:19478115-19478134 Msa0012790:intron 65.0%
!! GGAGATGGGGATGGTGGTGG+AGG - chr1_1:19478826-19478845 None:intergenic 65.0%
! GGAGGAGATGGGGATGGTGG+TGG - chr1_1:19478829-19478848 None:intergenic 65.0%
GGTGGAGGAGATGGGGATGG+TGG - chr1_1:19478832-19478851 None:intergenic 65.0%
!! GGGGATGGTGATGGTGGTGG+TGG - chr1_1:19478874-19478893 None:intergenic 65.0%
!! GGTGGGGATGGTGATGGTGG+TGG - chr1_1:19478877-19478896 None:intergenic 65.0%
TAGTAGGGAGGGGGTGGGGA+TGG - chr1_1:19478889-19478908 None:intergenic 65.0%
! GGTGATGGTGAGGGAGGTGG+AGG - chr1_1:19478922-19478941 None:intergenic 65.0%
! GGAGGTGGCGGTGATGGTGA+GGG - chr1_1:19478931-19478950 None:intergenic 65.0%
! AGGAGGTGGCGGTGATGGTG+AGG - chr1_1:19478932-19478951 None:intergenic 65.0%
GGAGATGGAGATGGGGGTGG+GGG - chr1_1:19478970-19478989 None:intergenic 65.0%
GGTGGAGATGGAGATGGGGG+TGG - chr1_1:19478973-19478992 None:intergenic 65.0%
!! AGACGGCGATGGTGGTGGAG+GGG - chr1_1:19479064-19479083 None:intergenic 65.0%
!! GAGACGGCGATGGTGGTGGA+GGG - chr1_1:19479065-19479084 None:intergenic 65.0%
!! GGTGACGGGGATGGAGGAGG+TGG - chr1_1:19475531-19475550 Msa0012770:three_prime_UTR 70.0%
!! GGAGGTGACGGGGATGGAGG+AGG - chr1_1:19475534-19475553 Msa0012770:three_prime_UTR 70.0%
!! GGTGGAGGTGACGGGGATGG+AGG - chr1_1:19475537-19475556 Msa0012770:three_prime_UTR 70.0%
!! GGTGGTGGAGGTGACGGGGA+TGG - chr1_1:19475540-19475559 Msa0012770:three_prime_UTR 70.0%
!! GGAGGTGGTGGGGAAGGCGA+GGG - chr1_1:19475657-19475676 Msa0012770:CDS 70.0%
!! TGGAGGTGGTGGGGAAGGCG+AGG - chr1_1:19475658-19475677 Msa0012770:CDS 70.0%
! GGGGAAGGTGAGGGTGGTGG+TGG - chr1_1:19475696-19475715 Msa0012770:CDS 70.0%
GGTGGGGAAGGTGAGGGTGG+TGG - chr1_1:19475699-19475718 Msa0012770:CDS 70.0%
GGTGGGGGTGGGGAAGGTGA+GGG - chr1_1:19475705-19475724 Msa0012770:CDS 70.0%
TGGTGGGGGTGGGGAAGGTG+AGG - chr1_1:19475706-19475725 Msa0012770:CDS 70.0%
GGAGGGGAAGGTGAGGGTGG+CGG - chr1_1:19475795-19475814 Msa0012770:intron 70.0%
GGTGGAGGGGAAGGTGAGGG+TGG - chr1_1:19475798-19475817 Msa0012770:intron 70.0%
GGAGGGGATGGTGAGGGTGG+TGG - chr1_1:19475890-19475909 Msa0012770:intron 70.0%
GGTGGAGGGGATGGTGAGGG+TGG - chr1_1:19475893-19475912 Msa0012770:intron 70.0%
GGGGGTGGAGGGGATGGTGA+GGG - chr1_1:19475896-19475915 Msa0012770:intron 70.0%
TGGGGGTGGAGGGGATGGTG+AGG - chr1_1:19475897-19475916 Msa0012770:intron 70.0%
! GCCGCTTTCACAGGGGGAGG+GGG - chr1_1:19477437-19477456 Msa0012790:CDS 70.0%
!! GGTGCCGCTTTCACAGGGGG+AGG - chr1_1:19477440-19477459 Msa0012790:CDS 70.0%
ATCACCTCCCCCACCGGCAC+CGG + chr1_1:19477478-19477497 Msa0012780:CDS 70.0%
!! TAAACCGGTGCCGGTGGGGG+AGG - chr1_1:19477485-19477504 Msa0012790:CDS 70.0%
! GCCGCTTTCACAGGGGGAGG+AGG - chr1_1:19477437-19477456 Msa0012790:CDS 70.0%
!! GGTGCCGCTTTCACAGGGGG+AGG - chr1_1:19477440-19477459 Msa0012790:CDS 70.0%
!! GGTGCCGCTTTCACAGGGGG+AGG - chr1_1:19477440-19477459 Msa0012790:CDS 70.0%
!! GGTGATGGGGATGGTGGGGG+TGG - chr1_1:19478106-19478125 Msa0012790:intron 70.0%
!! GGTGATGGGGATGGTGGGGG+TGG - chr1_1:19478106-19478125 Msa0012790:intron 70.0%
!! GGTGATGGGGATGGTGGGGG+TGG - chr1_1:19478106-19478125 Msa0012790:intron 70.0%
!! GGGGATGGGGATGGTGGAGG+TGG - chr1_1:19478490-19478509 Msa0012790:CDS 70.0%
! GGAGGGGATGGGGATGGTGG+AGG - chr1_1:19478493-19478512 Msa0012790:CDS 70.0%
GGAGGAGGGGATGGGGATGG+TGG - chr1_1:19478496-19478515 Msa0012790:CDS 70.0%
GGTGGAGGAGGGGATGGGGA+TGG - chr1_1:19478499-19478518 Msa0012790:CDS 70.0%
!! GGGGATGGGGATGGTGGAGG+TGG - chr1_1:19478490-19478509 Msa0012790:CDS 70.0%
! GGAGGGGATGGGGATGGTGG+AGG - chr1_1:19478493-19478512 Msa0012790:CDS 70.0%
GGAGGAGGGGATGGGGATGG+TGG - chr1_1:19478496-19478515 Msa0012790:CDS 70.0%
GGTGGAGGAGGGGATGGGGA+TGG - chr1_1:19478499-19478518 Msa0012790:CDS 70.0%
!! GGGGATGGGGATGGTGGTGG+TGG - chr1_1:19478634-19478653 Msa0012790:CDS 70.0%
! GGAGGGGATGGGGATGGTGG+TGG - chr1_1:19478493-19478512 Msa0012790:CDS 70.0%
GGAGGAGGGGATGGGGATGG+TGG - chr1_1:19478496-19478515 Msa0012790:CDS 70.0%
GGTGGAGGAGGGGATGGGGA+TGG - chr1_1:19478499-19478518 Msa0012790:CDS 70.0%
GGGGGTGGAGGAGATGGGGA+TGG - chr1_1:19478835-19478854 None:intergenic 70.0%
!! GGGGGTGGGGATGGTGATGG+TGG - chr1_1:19478880-19478899 None:intergenic 70.0%
GGAGGGGGTGGGGATGGTGA+TGG - chr1_1:19478883-19478902 None:intergenic 70.0%
! GGCGGTGATGGTGAGGGAGG+TGG - chr1_1:19478925-19478944 None:intergenic 70.0%
! GGTGGCGGTGATGGTGAGGG+AGG - chr1_1:19478928-19478947 None:intergenic 70.0%
!! GGAGACGGCGATGGTGGTGG+AGG - chr1_1:19479066-19479085 None:intergenic 70.0%
! GGAGGAGACGGCGATGGTGG+TGG - chr1_1:19479069-19479088 None:intergenic 70.0%
GGTGGAGGAGACGGCGATGG+TGG - chr1_1:19479072-19479091 None:intergenic 70.0%
GGAGGTGGAGGAGACGGCGA+TGG - chr1_1:19479075-19479094 None:intergenic 70.0%
! GGGGAAGGCGAGGGTGGTGG+TGG - chr1_1:19475648-19475667 Msa0012770:CDS 75.0%
GGTGGGGAAGGCGAGGGTGG+TGG - chr1_1:19475651-19475670 Msa0012770:CDS 75.0%
!! GGTGGTGGGGAAGGCGAGGG+TGG - chr1_1:19475654-19475673 Msa0012770:CDS 75.0%
GGGGGTGGGGAAGGTGAGGG+TGG - chr1_1:19475702-19475721 Msa0012770:CDS 75.0%
! GGGGAAGGTGAGGGTGGCGG+AGG - chr1_1:19475792-19475811 Msa0012770:intron 75.0%
GGAGGGGATGGCGACGGTGG+GGG - chr1_1:19478733-19478752 None:intergenic 75.0%
GGGAGGGGATGGCGACGGTG+GGG - chr1_1:19478734-19478753 None:intergenic 75.0%
GGGGAGGGGATGGCGACGGT+GGG - chr1_1:19478735-19478754 None:intergenic 75.0%
GGAGGGGGAGGGGATGGCGA+CGG - chr1_1:19478739-19478758 None:intergenic 75.0%
! GGGGATGGCGACGGTGGGGG+TGG - chr1_1:19478730-19478749 None:intergenic 80.0%
! GGGGGAGGGGATGGCGACGG+TGG - chr1_1:19478736-19478755 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 19475327 19479185 19475327 ID=Msa0012780;Name=Msa0012780
chr1_1 mRNA 19475327 19479185 19475327 ID=Msa0012780-mRNA-1;Parent=Msa0012780;Name=Msa0012780-mRNA-1;_AED=0.15;_eAED=0.16;_QI=0|0|0|1|1|1|3|0|1088
chr1_1 exon 19475327 19475738 19475327 ID=Msa0012780-mRNA-1:exon:7053;Parent=Msa0012780-mRNA-1
chr1_1 exon 19475834 19476520 19475834 ID=Msa0012780-mRNA-1:exon:7054;Parent=Msa0012780-mRNA-1
chr1_1 exon 19477018 19479185 19477018 ID=Msa0012780-mRNA-1:exon:7055;Parent=Msa0012780-mRNA-1
chr1_1 CDS 19475327 19475738 19475327 ID=Msa0012780-mRNA-1:cds;Parent=Msa0012780-mRNA-1
chr1_1 CDS 19475834 19476520 19475834 ID=Msa0012780-mRNA-1:cds;Parent=Msa0012780-mRNA-1
chr1_1 CDS 19477018 19479185 19477018 ID=Msa0012780-mRNA-1:cds;Parent=Msa0012780-mRNA-1
Gene Sequence

>Msa0012780

ATGACTGCTAAGGCCAGTAGCCCCAAAAGGGGTCATAACTGGCCACCAATGGCAATGGCATTGGCCATTGTTTTGATTTCGACTTCCATGGTTTCTGCTGCTGCAGATAGTTATATTTACTCTTCTCCTCCACCACCTTACGAGTACAAGTCACCACCACCACCGTCACCTTCACCACCACCTCCTTATGTTTACAAATCACCACCTCCTCCATCCCCGTCACCTCCACCACCATATGAGCACAAGGCTCCTGCTTATGAGTACAAGTCACCACCACCACCAACTCCTTCACCACCACCTCCTTATGTATACAAGTCACCACCACCACCCTCGCCTTCCCCACCACCTCCATATGTGTACAAGTCACCACCACCACCCTCACCTTCCCCACCCCCACCATACTACTACAAGATCTCCACCACCACCATCTCCATCACCCCCACCTCCATATTACTACAAGTCTCCCCACCACCCTCACCATCCCCTCCACCCCCATATATACACAAGGATCCACCATACTATTACAAATCCCCACCACCACCTTCACCATCTCCTCCACCACCATACTACTACAAGTCTCCCCCACCCCCTTCACCATCTCCTCCACCACCATACTATTATAAATCTCCTCCTCCTCCATCTCCTATTCCCCATACACCTTACTACTACAAATCACCCCCACCCCCTTCACCATCTCCTCCACCACCATACTACTATAAATCTCCCCCACCCCCTTCACCATCTTCTCCACCACCATACTACTACAAATCCCCTCCTCCTCCATCTCCTATTCCCCATACACCTTACTATTACAAGTCTCCTCCACCACCTTCACCATCTCCTCCACCACCATACTACTACAAATCTCCTCCCCCTCCATCTCCTATTCCCCACACACCTTACTACTACAAGTCTCCACCACCACCCAAGGTCCTTCCTCCACCATACTATTACAACTCTCCTCCTCCACCCGTTGCATATCCTCACCCACATCCCTACCACCACTCATTGATTGTGAGGGTAGTCGGTAAAGTCTACAGCTTCAGATGCTATGACTGGGAGTATCCTGCAAAGTCACATAACAAGAAACATCTCCAAGGTGCTGTTGTTGAGGTGACATGCAAAGCCGGGAGCAAAATCGTCAAGGCTTATGGTAAAACTAAGAACAATGGAAAGTATGCCATCACAGTTAAGGACTTTGACTATGTCAAATATGGTTCCACGGTGTGTAAGGCTGCCCTTTATGCTCCACCTAAGGGTTCACCCTTCAACATACCTACAAAGCTAAACCAAGGAACAAACTTGTACTTGAAATCCAAAGACAAGTACGAGGTTGTACTCAAGGCTAAGCCATTTGCCTATGCTTCAAAGAAACATTTCAAAGAATGTGAGAAGCCTAAGCCTTCACCAACTCCTTACTACTACAAATCACCCCCACCTCCCTCACCGGTTTACAAGTACAACTCGCCACCACCACCCGTCCATTATTATTCACCGCCATATTACTACAAGTCACCCCCTCCCCCTGTGAAAGCGGCACCAACTCCTTACTACTACAAATCACCTCCCCCACCGGCACCGGTTTACAAGTACAACTCCCCACCTCCACCGGTCCATTATTATTCACCTCCATACACCTATAAGTCACCTCCTCCCCCTGTGAAAGCAGCACCAACTCCTTACTACTACAAATCACCTCCACCTCCAGCACCAGTTTACAAGTACAACTCTCCACCTCCACCGGTCCATTATTACTCACCTCCATACACCTATAAGTCACCTCCTCCCCCTGTGAAAGCGGCACCAACTCCTTACTACTATAAATCACCTCCACCTCCCGCACCAGTTTACAAGTACAGCTCACCACCTCCACCAGTCCATTATTATTCACCTCCATATACCTACAAGTCACCTCCCCCTGTGAAAGCGGCACCAACTCCTTACTACTACAAATCACCTCCACCACCCGCACCGGTTTACAAGTACAACTCACCACCTCCACCGGTCCATTATTATTCTCCTCCATACTACTACAAGTCACCACCCCCACCATCACCATCACCTCCTCCACCATACTACTACAAGTCCCCACCTCCACCATCACCATCCCCTCCTCCACCTTATTATTACAAATCTCCTCCCCCACCCAAAGAGATTGTACACCCTCCATACTATTATAAGTCACCACCCCCACCATCCCCATCACCTCCTCCACCATACTATTATAAGTCTCCACCTCCACCATCACCATCCCCTCCTCCACCTTATTATTACAAATCTCCTCCCCCACCCAAAGAGATTGTACACCCTCCATACTACTATAAGTCACCACCCCCACCATCCCCATCACCTCCTCCACCATACTATTATAAGTCTCCACCTCCACCATCACCATCCCCTCCTCCACCTTATTATTACAAATCTCCTCCCCCACCCAAAGAGATTGTACACCCTCCATACTACTATAAGTCACCACCCCCACCATCCCCATCACCTCCTCCACCATACTATTATAAGTCTCCACCTCCACCATCACCATCTCCACCACCACCATACTATTACAAGTCACCACCTCCACCATCCCCATCCCCTCCTCCACCATACTACTATAAGTCACCACCTCCACCATCCCCATCCCCTCCTCCACCATACTACTATAAGTCCCCACCTCCTCCATCACCATCTCCACTACCACCTTACTATTATAAGTCACCACCACCACCATCCCCATCCCCTCCTCCACCATACTATTACAAGTCCCCACCTCCACCTAAGGAAATATCACATCCTCCTTATTACTATAAGTCACCACCCCCACCGTCGCCATCCCCTCCCCCTCCATACTATTACAAATCTCCTCCACCACCATCACCATCACCACCACCTCCCTACTATTACAAATCACCTCCACCACCATCCCCATCTCCTCCACCCCCCTATTACTACAAATCTCCACCACCACCATCACCATCCCCACCCCCTCCCTACTATTACAAATCACCTCCACCTCCCTCACCATCACCGCCACCTCCTTACTATTACAAATCTCCCCCACCCCCATCTCCATCTCCACCACCTCCTTATCACTATCAAAGTCCTCCTCCACCATCTCCCATTTCTCATCCTCCCTACTACTACAAATCCCCTCCACCACCATCGCCGTCTCCTCCACCTCCTTACCACTATGTGAGTCCTCCCCCACCAGTAAAGTCACCTCCACCATCAACATATATCTATGCTTCACCACCACCACCTCACTACAACTAA

Protein sequence

>Msa0012780

MTAKASSPKRGHNWPPMAMALAIVLISTSMVSAAADSYIYSSPPPPYEYKSPPPPSPSPPPPYVYKSPPPPSPSPPPPYEHKAPAYEYKSPPPPTPSPPPPYVYKSPPPPSPSPPPPYVYKSPPPPSPSPPPPYYYKISTTTISITPTSILLQVSPPPSPSPPPPYIHKDPPYYYKSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPIPHTPYYYKSPPPPSPSPPPPYYYKSPPPPSPSSPPPYYYKSPPPPSPIPHTPYYYKSPPPPSPSPPPPYYYKSPPPPSPIPHTPYYYKSPPPPKVLPPPYYYNSPPPPVAYPHPHPYHHSLIVRVVGKVYSFRCYDWEYPAKSHNKKHLQGAVVEVTCKAGSKIVKAYGKTKNNGKYAITVKDFDYVKYGSTVCKAALYAPPKGSPFNIPTKLNQGTNLYLKSKDKYEVVLKAKPFAYASKKHFKECEKPKPSPTPYYYKSPPPPSPVYKYNSPPPPVHYYSPPYYYKSPPPPVKAAPTPYYYKSPPPPAPVYKYNSPPPPVHYYSPPYTYKSPPPPVKAAPTPYYYKSPPPPAPVYKYNSPPPPVHYYSPPYTYKSPPPPVKAAPTPYYYKSPPPPAPVYKYSSPPPPVHYYSPPYTYKSPPPVKAAPTPYYYKSPPPPAPVYKYNSPPPPVHYYSPPYYYKSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPKEIVHPPYYYKSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPKEIVHPPYYYKSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPKEIVHPPYYYKSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPSPLPPYYYKSPPPPSPSPPPPYYYKSPPPPKEISHPPYYYKSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPSPPPPYHYQSPPPPSPISHPPYYYKSPPPPSPSPPPPYHYVSPPPPVKSPPPSTYIYASPPPPHYN*