Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1349630 | XP_003611069.2 | 89.591 | 538 | 6 | 2 | 1 | 537 | 1 | 489 | 0.0 | 989 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1349630 | G7KC11 | 89.591 | 538 | 6 | 2 | 1 | 537 | 1 | 489 | 0.0 | 989 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1349630 | Msa1356740 | 0.803157 | 3.986335e-49 | -8.615850e-47 |
| Msa1349630 | Msa1361400 | 0.811748 | 5.995428e-51 | -8.615850e-47 |
| Msa1349630 | Msa1374550 | 0.803629 | 3.182653e-49 | -8.615850e-47 |
| Msa1349630 | Msa1446810 | 0.800350 | 1.501971e-48 | -8.615850e-47 |
| Msa1276660 | Msa1349630 | 0.803022 | 4.251359e-49 | -8.615850e-47 |
| Msa1303240 | Msa1349630 | 0.800546 | 1.370142e-48 | -8.615850e-47 |
| Msa1303250 | Msa1349630 | 0.809943 | 1.473444e-50 | -8.615850e-47 |
| Msa0385390 | Msa1349630 | 0.808485 | 3.026130e-50 | -8.615850e-47 |
| Msa0302170 | Msa1349630 | 0.809369 | 1.957597e-50 | -8.615850e-47 |
| Msa0535040 | Msa1349630 | 0.805212 | 1.488800e-49 | -8.615850e-47 |
| Msa0574890 | Msa1349630 | 0.802251 | 6.130440e-49 | -8.615850e-47 |
| Msa0861600 | Msa1349630 | 0.801967 | 7.011918e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1349630 | MtrunA17_Chr8g0387371 | 72.179 | 514 | 83 | 4 | 35 | 537 | 49 | 513 | 0.0 | 771 |
| Msa1349630 | MtrunA17_Chr8g0348511 | 57.765 | 528 | 164 | 5 | 19 | 537 | 8 | 485 | 0.0 | 630 |
| Msa1349630 | MtrunA17_Chr2g0327551 | 59.300 | 457 | 137 | 1 | 81 | 537 | 45 | 452 | 0.0 | 590 |
| Msa1349630 | MtrunA17_Chr5g0397301 | 97.865 | 281 | 5 | 1 | 1 | 280 | 1 | 281 | 0.0 | 571 |
| Msa1349630 | MtrunA17_Chr4g0030331 | 59.629 | 431 | 125 | 1 | 76 | 506 | 102 | 483 | 0.0 | 561 |
| Msa1349630 | MtrunA17_Chr5g0397311 | 92.920 | 226 | 9 | 1 | 319 | 537 | 5 | 230 | 2.77e-155 | 444 |
| Msa1349630 | MtrunA17_Chr7g0239421 | 42.035 | 452 | 188 | 6 | 81 | 518 | 92 | 483 | 5.54e-118 | 359 |
| Msa1349630 | MtrunA17_Chr3g0112211 | 41.064 | 470 | 216 | 8 | 72 | 537 | 73 | 485 | 1.76e-114 | 349 |
| Msa1349630 | MtrunA17_Chr5g0395861 | 39.030 | 474 | 229 | 7 | 71 | 537 | 115 | 535 | 4.88e-110 | 340 |
| Msa1349630 | MtrunA17_Chr4g0023991 | 42.457 | 464 | 205 | 10 | 81 | 537 | 63 | 471 | 4.92e-104 | 322 |
| Msa1349630 | MtrunA17_Chr4g0024001 | 36.730 | 471 | 235 | 8 | 70 | 537 | 63 | 473 | 1.41e-98 | 308 |
| Msa1349630 | MtrunA17_Chr7g0248241 | 54.266 | 293 | 119 | 6 | 6 | 285 | 8 | 298 | 7.47e-94 | 290 |
| Msa1349630 | MtrunA17_Chr2g0322991 | 38.511 | 470 | 228 | 7 | 76 | 537 | 52 | 468 | 2.17e-90 | 286 |
| Msa1349630 | MtrunA17_Chr7g0248231 | 63.587 | 184 | 66 | 1 | 326 | 509 | 1 | 183 | 7.81e-84 | 260 |
| Msa1349630 | MtrunA17_Chr2g0284301 | 61.702 | 47 | 18 | 0 | 221 | 267 | 1 | 47 | 7.50e-13 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1349630 | AT5G41460.1 | 63.333 | 540 | 121 | 6 | 25 | 537 | 30 | 519 | 0.0 | 692 |
| Msa1349630 | AT4G23490.1 | 60.821 | 536 | 137 | 4 | 26 | 537 | 35 | 521 | 0.0 | 650 |
| Msa1349630 | AT4G11350.1 | 59.811 | 530 | 152 | 4 | 20 | 537 | 22 | 502 | 0.0 | 644 |
| Msa1349630 | AT1G01570.1 | 52.390 | 523 | 181 | 9 | 28 | 537 | 4 | 471 | 0.0 | 545 |
| Msa1349630 | AT1G01570.2 | 52.390 | 523 | 181 | 9 | 28 | 537 | 35 | 502 | 0.0 | 545 |
| Msa1349630 | AT1G07850.1 | 57.860 | 458 | 143 | 2 | 81 | 537 | 123 | 531 | 0.0 | 526 |
| Msa1349630 | AT4G00295.1 | 48.780 | 492 | 184 | 8 | 31 | 508 | 30 | 467 | 2.06e-159 | 464 |
| Msa1349630 | AT2G37730.1 | 39.668 | 542 | 256 | 11 | 9 | 532 | 14 | 502 | 1.02e-131 | 395 |
| Msa1349630 | AT4G11350.2 | 66.545 | 275 | 78 | 4 | 20 | 281 | 22 | 295 | 1.08e-122 | 365 |
| Msa1349630 | AT1G33250.1 | 38.065 | 465 | 231 | 4 | 83 | 541 | 131 | 544 | 8.71e-110 | 340 |
| Msa1349630 | AT1G05280.1 | 38.511 | 470 | 224 | 9 | 81 | 537 | 68 | 485 | 1.04e-107 | 332 |
| Msa1349630 | AT1G05280.2 | 38.851 | 435 | 204 | 7 | 81 | 505 | 68 | 450 | 5.89e-99 | 309 |
| Msa1349630 | AT4G15240.1 | 37.684 | 475 | 227 | 10 | 70 | 537 | 70 | 482 | 1.87e-95 | 300 |
| Msa1349630 | AT3G11420.1 | 33.269 | 520 | 284 | 12 | 27 | 538 | 40 | 504 | 7.96e-88 | 281 |
| Msa1349630 | AT5G12460.1 | 33.933 | 389 | 193 | 7 | 81 | 466 | 36 | 363 | 7.02e-72 | 238 |
Find 137 sgRNAs with CRISPR-Local
Find 473 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATAGGTATCCTGGTCTTTA+TGG | 0.131938 | tig0010967:+64219 | Msa1349630:CDS |
| CTTCAAGAACATTTCTTAAT+TGG | 0.163109 | tig0010967:+68282 | Msa1349630:CDS |
| TTTCCGAGACATTGCGTTTA+GGG | 0.264696 | tig0010967:+63962 | Msa1349630:CDS |
| AGAAGCCAGACCCGCATCTA+TGG | 0.284136 | tig0010967:+68519 | Msa1349630:CDS |
| TTGTGACGGATAATTTGATT+AGG | 0.320319 | tig0010967:+64031 | Msa1349630:CDS |
| TCCGGAATGCCGATGGAAAA+TGG | 0.320425 | tig0010967:+68460 | Msa1349630:CDS |
| GATGGACCATTTCAGTTTCA+TGG | 0.324965 | tig0010967:+68204 | Msa1349630:CDS |
| GTTTCCGAGACATTGCGTTT+AGG | 0.338886 | tig0010967:+63961 | Msa1349630:CDS |
| GAGTGGTGATTGATGGAAAA+TGG | 0.347760 | tig0010967:-63525 | None:intergenic |
| GCTTCCACTCTTGTGGCATT+CGG | 0.348471 | tig0010967:-68101 | None:intergenic |
| TGACACGGGTGTCGAGTAAC+AGG | 0.350943 | tig0010967:-68347 | None:intergenic |
| AGAAAATGAGAGGAATAGTA+TGG | 0.352306 | tig0010967:+63812 | Msa1349630:CDS |
| CTTCCACTCTTGTGGCATTC+GGG | 0.360822 | tig0010967:-68100 | None:intergenic |
| TGTGACGGATAATTTGATTA+GGG | 0.365212 | tig0010967:+64032 | Msa1349630:CDS |
| TTGCAGCCTCATCAAAACTT+TGG | 0.368767 | tig0010967:+63625 | Msa1349630:CDS |
| GATGTGTATGGGAACCTATT+TGG | 0.375233 | tig0010967:+68008 | Msa1349630:CDS |
| CTGGTGAAAACCGATTTCTT+TGG | 0.375358 | tig0010967:-64292 | None:intergenic |
| ATGTGTATGGGAACCTATTT+GGG | 0.377930 | tig0010967:+68009 | Msa1349630:CDS |
| TGCAGCCTCATCAAAACTTT+GGG | 0.381822 | tig0010967:+63626 | Msa1349630:CDS |
| GGTGGATTTGCAATTAGTTA+TGG | 0.395771 | tig0010967:+64156 | Msa1349630:CDS |
| GGAGGTGACCATCGTGCTAT+TGG | 0.396157 | tig0010967:-66419 | None:intergenic |
| CTTGTGGCATTCGGGAAGAT+TGG | 0.406308 | tig0010967:-68092 | None:intergenic |
| ATTTGCAATTAGTTATGGTT+TGG | 0.407855 | tig0010967:+64161 | Msa1349630:CDS |
| TTTGAGAGTGTAAATGAAGT+AGG | 0.408544 | tig0010967:-63469 | None:intergenic |
| AGTGATACCAATGGAGTTAC+TGG | 0.408585 | tig0010967:-68047 | None:intergenic |
| TGACCTTGTTTGTTTGTGTA+TGG | 0.409139 | tig0010967:-63910 | None:intergenic |
| CATCGTGCTATTGGTTTGGT+AGG | 0.410971 | tig0010967:-66410 | None:intergenic |
| CGAGCTTCATTGGTATTGTA+AGG | 0.413132 | tig0010967:-68133 | None:intergenic |
| CTATCCCATAGATGCGGGTC+TGG | 0.414842 | tig0010967:-68524 | None:intergenic |
| TTTGGTAGGGATGGTGTTGG+TGG | 0.419499 | tig0010967:-66396 | None:intergenic |
| GGAATGGCTTATGGTGGTGG+TGG | 0.420801 | tig0010967:+64138 | Msa1349630:CDS |
| GCTGTTTGCTGCATTGATGC+TGG | 0.432476 | tig0010967:-63550 | None:intergenic |
| GAAAGAACTACATAAAACTA+TGG | 0.434845 | tig0010967:+63655 | Msa1349630:CDS |
| GTTCCACTTACCAAAGAAAT+CGG | 0.436793 | tig0010967:+64282 | Msa1349630:CDS |
| GTCACCTCCTCCTCCACAAA+TGG | 0.438370 | tig0010967:+66433 | Msa1349630:CDS |
| GAGCTGCAAGAAGCCCAAAT+AGG | 0.439253 | tig0010967:-68022 | None:intergenic |
| TTCCATCGGCATTCCGGATG+AGG | 0.443194 | tig0010967:-68455 | None:intergenic |
| ACTCTGCAGCAGTTTCTCCT+TGG | 0.444199 | tig0010967:-68885 | None:intergenic |
| TATGGAATGGCTTATGGTGG+TGG | 0.444530 | tig0010967:+64135 | Msa1349630:CDS |
| TTCACCTCCATTTGTGGAGG+AGG | 0.446802 | tig0010967:-66440 | None:intergenic |
| CCTGCTGAGTCGAGCTTCAT+TGG | 0.447499 | tig0010967:-68143 | None:intergenic |
| ACCTCCATTTGTGGAGGAGG+AGG | 0.450739 | tig0010967:-66437 | None:intergenic |
| TGATCGAATGCAAGCTTGTA+TGG | 0.456256 | tig0010967:+64248 | Msa1349630:CDS |
| TTGGAACAGTATGATGTGTA+TGG | 0.457109 | tig0010967:+67996 | Msa1349630:intron |
| TTTGAAAGGTAAAACACAAA+AGG | 0.457164 | tig0010967:-68374 | None:intergenic |
| CAATTAAGAAATGTTCTTGA+AGG | 0.458016 | tig0010967:-68281 | None:intergenic |
| AAAGCATCGTGTTCCTCATC+CGG | 0.458774 | tig0010967:+68442 | Msa1349630:CDS |
| AAACCGATTTCTTTGGTAAG+TGG | 0.461290 | tig0010967:-64285 | None:intergenic |
| TGCAGGATCGTTGTATTCAT+AGG | 0.462057 | tig0010967:+64202 | Msa1349630:CDS |
| GCTGGAAGAGTGGTGATTGA+TGG | 0.466330 | tig0010967:-63532 | None:intergenic |
| TGACCATCGTGCTATTGGTT+TGG | 0.469982 | tig0010967:-66414 | None:intergenic |
| ATGGACCATTTCAGTTTCAT+GGG | 0.472620 | tig0010967:+68205 | Msa1349630:CDS |
| GTGTGGGATTCACTAAGGTT+GGG | 0.481023 | tig0010967:-63380 | None:intergenic |
| AAAACCCCATGAAACTGAAA+TGG | 0.481667 | tig0010967:-68210 | None:intergenic |
| TGGTTTGGTAGGGATGGTGT+TGG | 0.482756 | tig0010967:-66399 | None:intergenic |
| CGTTGTATTCATAGGTATCC+TGG | 0.489757 | tig0010967:+64210 | Msa1349630:CDS |
| GTCAAACAAGAAAGGAAGAA+TGG | 0.491939 | tig0010967:+68914 | Msa1349630:CDS |
| TGTGTGGGATTCACTAAGGT+TGG | 0.492478 | tig0010967:-63381 | None:intergenic |
| TGGTGTTGGTGGTGAAAAGA+GGG | 0.492986 | tig0010967:-66385 | None:intergenic |
| AACAATGCGTGAGATTCTAA+TGG | 0.495795 | tig0010967:-63941 | None:intergenic |
| AGATGTGCGGTGGTTTGTGA+TGG | 0.499680 | tig0010967:+63990 | Msa1349630:CDS |
| TGAAGGCATTTCAATTTCGC+GGG | 0.500204 | tig0010967:-68264 | None:intergenic |
| CAAGCTTGTATGGCTGAACT+TGG | 0.501075 | tig0010967:+64258 | Msa1349630:CDS |
| TTCCTCATCCGGAATGCCGA+TGG | 0.506157 | tig0010967:+68453 | Msa1349630:CDS |
| TTGTTGTGTGGGATTCACTA+AGG | 0.511560 | tig0010967:-63385 | None:intergenic |
| GGAAGAATGGTGATGGATGT+AGG | 0.513629 | tig0010967:+68927 | Msa1349630:CDS |
| TGCTATTGGTTTGGTAGGGA+TGG | 0.516127 | tig0010967:-66405 | None:intergenic |
| TGTGAAGGTCGTTGTTGTGT+GGG | 0.521879 | tig0010967:-63396 | None:intergenic |
| GTGATGAAGTCAAACAAGAA+AGG | 0.521900 | tig0010967:+68906 | Msa1349630:CDS |
| ATGGTGTTGGTGGTGAAAAG+AGG | 0.522833 | tig0010967:-66386 | None:intergenic |
| GAGCTCCGGCATGTAGTGTT+CGG | 0.524859 | tig0010967:+63600 | Msa1349630:CDS |
| TTGAAGCGCTTCCACTCTTG+TGG | 0.527472 | tig0010967:-68108 | None:intergenic |
| TTGAAGGCATTTCAATTTCG+CGG | 0.531589 | tig0010967:-68265 | None:intergenic |
| GAAGCCAGACCCGCATCTAT+GGG | 0.535021 | tig0010967:+68520 | Msa1349630:CDS |
| CTTCTAAAAGAACCGAGCTC+CGG | 0.536873 | tig0010967:+63586 | Msa1349630:CDS |
| AATATATTTGGCAGGCTCCA+AGG | 0.539308 | tig0010967:+68868 | Msa1349630:intron |
| TGTGGAGGAAATCATCAAAC+CGG | 0.540638 | tig0010967:+70290 | Msa1349630:CDS |
| ATTTCCTCCACATAGTTGTG+TGG | 0.541215 | tig0010967:-70279 | None:intergenic |
| CAAGAAAGGAAGAATGGTGA+TGG | 0.543356 | tig0010967:+68920 | Msa1349630:CDS |
| ATGTGAAGGTCGTTGTTGTG+TGG | 0.544002 | tig0010967:-63397 | None:intergenic |
| AATGAGAGGAATAGTATGGA+TGG | 0.544772 | tig0010967:+63816 | Msa1349630:CDS |
| TTTGCTGTTCAGATATTTCG+CGG | 0.549173 | tig0010967:+68230 | Msa1349630:CDS |
| ACACAAAAGGCTTCTGACAC+GGG | 0.550493 | tig0010967:-68361 | None:intergenic |
| ATGGTTGCAATTGCTTGAAG+TGG | 0.552924 | tig0010967:-63499 | None:intergenic |
| GATGTAGGTATATGTAAAGA+TGG | 0.553533 | tig0010967:+68942 | Msa1349630:CDS |
| ATCGTGCTATTGGTTTGGTA+GGG | 0.553708 | tig0010967:-66409 | None:intergenic |
| AACACAAAAGGCTTCTGACA+CGG | 0.555456 | tig0010967:-68362 | None:intergenic |
| TTTCCTCCACATAGTTGTGT+GGG | 0.555727 | tig0010967:-70278 | None:intergenic |
| AAGCCCTAAACGCAATGTCT+CGG | 0.559380 | tig0010967:-63965 | None:intergenic |
| TGGTGAAAAGAGGGAGATAG+TGG | 0.559917 | tig0010967:-66376 | None:intergenic |
| TTCCTCCACATAGTTGTGTG+GGG | 0.560043 | tig0010967:-70277 | None:intergenic |
| TGAGTAAAGCGTTACGAAGA+GGG | 0.562718 | tig0010967:-70338 | None:intergenic |
| GTTACGACAAAGAAAAGAGA+TGG | 0.565849 | tig0010967:+68186 | Msa1349630:CDS |
| ACTTCAAGCAATTGCAACCA+TGG | 0.573920 | tig0010967:+63501 | Msa1349630:CDS |
| GAACACTACATGCCGGAGCT+CGG | 0.575438 | tig0010967:-63598 | None:intergenic |
| AGCTCATCCAGTAACTCCAT+TGG | 0.575487 | tig0010967:+68040 | Msa1349630:CDS |
| ACCTCCTCCTCCACAAATGG+AGG | 0.584943 | tig0010967:+66436 | Msa1349630:CDS |
| GTACTCTATCCCATAGATGC+GGG | 0.590294 | tig0010967:-68529 | None:intergenic |
| GAAACTTGTTGTGATATCGC+CGG | 0.592918 | tig0010967:-70309 | None:intergenic |
| CCAATGAAGCTCGACTCAGC+AGG | 0.595651 | tig0010967:+68143 | Msa1349630:CDS |
| AAAAGCTCTAGTGAAAATGC+AGG | 0.596632 | tig0010967:+64185 | Msa1349630:CDS |
| TCTTATGGAATGGCTTATGG+TGG | 0.598726 | tig0010967:+64132 | Msa1349630:CDS |
| ACAACTTTGTCAAGAGCAGA+AGG | 0.600062 | tig0010967:-68488 | None:intergenic |
| CTGCATTGATGCTGGAAGAG+TGG | 0.601584 | tig0010967:-63542 | None:intergenic |
| TCCTCCACATAGTTGTGTGG+GGG | 0.601992 | tig0010967:-70276 | None:intergenic |
| ACTCAGCAAAGATTATGCTA+TGG | 0.602438 | tig0010967:+63424 | Msa1349630:CDS |
| TACAATGAGAAGAAAATGAG+AGG | 0.603290 | tig0010967:+63802 | Msa1349630:CDS |
| AAGTAAGAAAGATGTGGTGT+GGG | 0.604240 | tig0010967:-66344 | None:intergenic |
| AAAGTAAGAAAGATGTGGTG+TGG | 0.604870 | tig0010967:-66345 | None:intergenic |
| TTGGCTCAACCACGTCAAGA+TGG | 0.607999 | tig0010967:-68073 | None:intergenic |
| GATGTGCGGTGGTTTGTGAT+GGG | 0.608955 | tig0010967:+63991 | Msa1349630:CDS |
| AGTAGGTTAGAGAAACAGCT+AGG | 0.613573 | tig0010967:-63452 | None:intergenic |
| AGATGGTGCAGTGATACCAA+TGG | 0.614001 | tig0010967:-68056 | None:intergenic |
| CTTCCCGAATGCCACAAGAG+TGG | 0.621715 | tig0010967:+68097 | Msa1349630:CDS |
| TTGCTGTTCAGATATTTCGC+GGG | 0.625108 | tig0010967:+68231 | Msa1349630:CDS |
| AAGACAAAGTAAGAAAGATG+TGG | 0.628333 | tig0010967:-66350 | None:intergenic |
| CAATTCCGAACACTACATGC+CGG | 0.628782 | tig0010967:-63605 | None:intergenic |
| GTTTAGGGCTTAAAGATGTG+CGG | 0.631480 | tig0010967:+63977 | Msa1349630:CDS |
| TGGACCATTTCAGTTTCATG+GGG | 0.633074 | tig0010967:+68206 | Msa1349630:CDS |
| TTTCCATACACAAACAAACA+AGG | 0.634411 | tig0010967:+63907 | Msa1349630:CDS |
| ATGAGTAAAGCGTTACGAAG+AGG | 0.635959 | tig0010967:-70339 | None:intergenic |
| AGGTATATGTAAAGATGGTG+AGG | 0.636099 | tig0010967:+68947 | Msa1349630:CDS |
| TGGAACAGTATGATGTGTAT+GGG | 0.639733 | tig0010967:+67997 | Msa1349630:intron |
| TAGGGCTTAAAGATGTGCGG+TGG | 0.646743 | tig0010967:+63980 | Msa1349630:CDS |
| TCATCAGAACCATAAAGACC+AGG | 0.654422 | tig0010967:-64228 | None:intergenic |
| TGTGATGGGAGACGATGACA+CGG | 0.658473 | tig0010967:+64005 | Msa1349630:CDS |
| CGTACTCTATCCCATAGATG+CGG | 0.662413 | tig0010967:-68530 | None:intergenic |
| GACACGGGTGTCGAGTAACA+GGG | 0.666804 | tig0010967:-68346 | None:intergenic |
| GAAGGCATTTCAATTTCGCG+GGG | 0.666864 | tig0010967:-68263 | None:intergenic |
| AATGCGTGAGATTCTAATGG+CGG | 0.673864 | tig0010967:-63938 | None:intergenic |
| TCTGAACGAAGGTCTACCAC+CGG | 0.676121 | tig0010967:+63858 | Msa1349630:CDS |
| GTGAAAACAAATCTGAACGA+AGG | 0.684155 | tig0010967:+63847 | Msa1349630:CDS |
| GTGAGATTCTAATGGCGGAA+CGG | 0.685008 | tig0010967:-63933 | None:intergenic |
| TTTGCTGAGTGTGAATGTGA+AGG | 0.711752 | tig0010967:-63411 | None:intergenic |
| ATCACTGCACCATCTTGACG+TGG | 0.717319 | tig0010967:+68064 | Msa1349630:CDS |
| GATTGATGGAAAATGGACCA+TGG | 0.742814 | tig0010967:-63518 | None:intergenic |
| CTACCAAACCAATAGCACGA+TGG | 0.772198 | tig0010967:+66411 | Msa1349630:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAATTAAGTTATTTTTTG+AGG | - | tig0010967:64557-64576 | None:intergenic | 10.0% |
| !! | AAAAATAACTTAATTAAACT+TGG | + | tig0010967:64559-64578 | Msa1349630:intron | 10.0% |
| !!! | TAAAATTGCAAATTTTTAAA+TGG | - | tig0010967:65427-65446 | None:intergenic | 10.0% |
| !! | ATTATAATATATATTTCCTA+TGG | - | tig0010967:66005-66024 | None:intergenic | 10.0% |
| !!! | AATTTAATTTACTGAAATAA+AGG | + | tig0010967:69160-69179 | Msa1349630:intron | 10.0% |
| !! | AAAAGATACATAAAAATAAA+GGG | - | tig0010967:69964-69983 | None:intergenic | 10.0% |
| !!! | TTTTGTTTTTCTAATAATGT+TGG | - | tig0010967:63335-63354 | None:intergenic | 15.0% |
| !!! | TGATTCAACTTATTATTTTT+TGG | + | tig0010967:63769-63788 | Msa1349630:intron | 15.0% |
| !!! | ATAAGCAGTTTTATTATATT+GGG | + | tig0010967:64073-64092 | Msa1349630:CDS | 15.0% |
| !!! | CAGAATATATATTTTTCTTA+TGG | + | tig0010967:64117-64136 | Msa1349630:CDS | 15.0% |
| !!! | TATATATTTTTCTTATGGAA+TGG | + | tig0010967:64122-64141 | Msa1349630:CDS | 15.0% |
| !! | AAATGAATTATATATAGTGT+CGG | + | tig0010967:64486-64505 | Msa1349630:intron | 15.0% |
| !! | TGTATATTAGTAGAAAAATA+CGG | - | tig0010967:65466-65485 | None:intergenic | 15.0% |
| !! | ATTAATTAAACAGATTACAA+GGG | - | tig0010967:67884-67903 | None:intergenic | 15.0% |
| !! | AATTAATTAAACAGATTACA+AGG | - | tig0010967:67885-67904 | None:intergenic | 15.0% |
| !! | AATTAGTTGAATATTGTTTA+AGG | + | tig0010967:68576-68595 | Msa1349630:intron | 15.0% |
| !! | TTAATCTTACTTAATTTCTT+TGG | + | tig0010967:68827-68846 | Msa1349630:intron | 15.0% |
| !! | GCTCATATATTAAATATATT+TGG | + | tig0010967:68856-68875 | Msa1349630:intron | 15.0% |
| !! | ATATATTAAATATATTTGGC+AGG | + | tig0010967:68860-68879 | Msa1349630:intron | 15.0% |
| !! | AATGCATATATAGTTAAATT+TGG | - | tig0010967:69446-69465 | None:intergenic | 15.0% |
| !!! | GAAAATTTTGACATTATTAT+AGG | - | tig0010967:69808-69827 | None:intergenic | 15.0% |
| !! | TAAACTATAAATCATGAATA+GGG | + | tig0010967:69831-69850 | Msa1349630:intron | 15.0% |
| !! | GAAAAGATACATAAAAATAA+AGG | - | tig0010967:69965-69984 | None:intergenic | 15.0% |
| !!! | CATAAGCAGTTTTATTATAT+TGG | + | tig0010967:64072-64091 | Msa1349630:CDS | 20.0% |
| !! | ACTATATATAATTCATTTCC+CGG | - | tig0010967:64484-64503 | None:intergenic | 20.0% |
| !!! | AAGAAACAATTTCTACTTTT+AGG | + | tig0010967:64701-64720 | Msa1349630:intron | 20.0% |
| !! | ACTTAAATAAATACACATTG+AGG | - | tig0010967:64900-64919 | None:intergenic | 20.0% |
| !! | CAATGTGTATTTATTTAAGT+AGG | + | tig0010967:64900-64919 | Msa1349630:intron | 20.0% |
| !!! | AAGAGGGTATAATTTTTATT+TGG | - | tig0010967:64961-64980 | None:intergenic | 20.0% |
| !! | TGAATGGATAAAATTGATTA+AGG | - | tig0010967:65015-65034 | None:intergenic | 20.0% |
| !!! | TAATTTTCAATCTAGATGAA+TGG | - | tig0010967:65031-65050 | None:intergenic | 20.0% |
| !!! | AAATACTTAGTTGCATTTTT+CGG | - | tig0010967:66179-66198 | None:intergenic | 20.0% |
| !!! | CAATGTTCTTTTTAATCTAA+TGG | - | tig0010967:66307-66326 | None:intergenic | 20.0% |
| !! | TTTATCACAAAACAAATGAT+GGG | - | tig0010967:66615-66634 | None:intergenic | 20.0% |
| !!! | TTTTATCACAAAACAAATGA+TGG | - | tig0010967:66616-66635 | None:intergenic | 20.0% |
| !! | AATAAATCCATTAGATTTCT+TGG | + | tig0010967:66787-66806 | Msa1349630:intron | 20.0% |
| !! | ATTAATTCCAAGAAATCTAA+TGG | - | tig0010967:66797-66816 | None:intergenic | 20.0% |
| !!! | AATTTGTTATTGTTTTACAG+TGG | + | tig0010967:66814-66833 | Msa1349630:intron | 20.0% |
| !!! | TTTAATTTCTCAGTTCTTTT+TGG | + | tig0010967:67373-67392 | Msa1349630:intron | 20.0% |
| !! | ATACCAATATGAAAATTTGA+CGG | - | tig0010967:67806-67825 | None:intergenic | 20.0% |
| !!! | AATTTTCATATTGGTATGAT+AGG | + | tig0010967:67809-67828 | Msa1349630:intron | 20.0% |
| !!! | AATTGAATTTAGCTTTTGAA+AGG | - | tig0010967:68391-68410 | None:intergenic | 20.0% |
| !! | TTGCACAAAAATAAATTAGA+TGG | + | tig0010967:69256-69275 | Msa1349630:intron | 20.0% |
| !! | TGCACAAAAATAAATTAGAT+GGG | + | tig0010967:69257-69276 | Msa1349630:intron | 20.0% |
| !!! | ATTGAAAACAAAAACGATTT+TGG | + | tig0010967:69574-69593 | Msa1349630:intron | 20.0% |
| !!! | ATTTTGACATTATTATAGGT+TGG | - | tig0010967:69804-69823 | None:intergenic | 20.0% |
| !! | ATTCATGATTTATAGTTTAG+AGG | - | tig0010967:69830-69849 | None:intergenic | 20.0% |
| !! | CTAAACTATAAATCATGAAT+AGG | + | tig0010967:69830-69849 | Msa1349630:intron | 20.0% |
| !! | AAACTATAAATCATGAATAG+GGG | + | tig0010967:69832-69851 | Msa1349630:intron | 20.0% |
| !! | TACATAAAAATAAAGGGTTA+AGG | - | tig0010967:69958-69977 | None:intergenic | 20.0% |
| ! | GAAAGAACTACATAAAACTA+TGG | + | tig0010967:63655-63674 | Msa1349630:CDS | 25.0% |
| !!! | TATTATTTTTTGGCGTAAAC+AGG | + | tig0010967:63779-63798 | Msa1349630:intron | 25.0% |
| ! | ATTTGCAATTAGTTATGGTT+TGG | + | tig0010967:64161-64180 | Msa1349630:CDS | 25.0% |
| ! | TAAATCAATAATTACGTACC+TGG | - | tig0010967:64314-64333 | None:intergenic | 25.0% |
| ! | CTAACAGGAAAAAAGAAAAA+TGG | - | tig0010967:64423-64442 | None:intergenic | 25.0% |
| !! | CATTTTTCTTTTTTCCTGTT+AGG | + | tig0010967:64421-64440 | Msa1349630:intron | 25.0% |
| ! | TATATATAATTCATTTCCCG+GGG | - | tig0010967:64482-64501 | None:intergenic | 25.0% |
| ! | CTATATATAATTCATTTCCC+GGG | - | tig0010967:64483-64502 | None:intergenic | 25.0% |
| ! | CTCATAAAAAAATAGAGTCA+TGG | - | tig0010967:64520-64539 | None:intergenic | 25.0% |
| ! | ACTTAATTAAACTTGGCTAA+TGG | + | tig0010967:64566-64585 | Msa1349630:intron | 25.0% |
| ! | GAGAAGTAAGAAAGTTTAAT+GGG | - | tig0010967:64795-64814 | None:intergenic | 25.0% |
| ! | TGAGAAGTAAGAAAGTTTAA+TGG | - | tig0010967:64796-64815 | None:intergenic | 25.0% |
| ! | TAGAATTCCGAATTTGAATT+TGG | + | tig0010967:64857-64876 | Msa1349630:intron | 25.0% |
| ! | TAAATAAATACACATTGAGG+AGG | - | tig0010967:64897-64916 | None:intergenic | 25.0% |
| ! | AATAAAAGAAATCACGAAGA+GGG | - | tig0010967:64977-64996 | None:intergenic | 25.0% |
| ! | TTTAAATGGATCATCTATTG+CGG | - | tig0010967:65413-65432 | None:intergenic | 25.0% |
| !!! | ATTTTTTAGATTTTGACCCA+GGG | - | tig0010967:65968-65987 | None:intergenic | 25.0% |
| !!! | TATTTTTTAGATTTTGACCC+AGG | - | tig0010967:65969-65988 | None:intergenic | 25.0% |
| ! | GCTGAACAAATCTAATTAAT+AGG | - | tig0010967:66096-66115 | None:intergenic | 25.0% |
| !! | ATAAACACATCCTTTTACAT+AGG | + | tig0010967:66213-66232 | Msa1349630:intron | 25.0% |
| !! | TAAACACATCCTTTTACATA+GGG | + | tig0010967:66214-66233 | Msa1349630:intron | 25.0% |
| ! | TGGGATAAAATAACTGAATA+AGG | - | tig0010967:66531-66550 | None:intergenic | 25.0% |
| !! | TTTAGAGCTGAATTTGAATT+GGG | - | tig0010967:66550-66569 | None:intergenic | 25.0% |
| !!! | AACAATCTCAAAAGTGTTTT+TGG | + | tig0010967:66671-66690 | Msa1349630:intron | 25.0% |
| !!! | TTATGGAAAAGATTTTGACT+TGG | + | tig0010967:66846-66865 | Msa1349630:intron | 25.0% |
| !! | AGCTTTTATATATTAGCACT+TGG | - | tig0010967:67292-67311 | None:intergenic | 25.0% |
| !!! | TAAAATCACTTTTTTGCACT+TGG | - | tig0010967:67357-67376 | None:intergenic | 25.0% |
| !! | ATTTTCAACAAAAGAAGACA+TGG | - | tig0010967:67449-67468 | None:intergenic | 25.0% |
| !! | ACCAATATACTTAGACTTTT+TGG | + | tig0010967:67707-67726 | Msa1349630:intron | 25.0% |
| ! | TCCAAAAAGTCTAAGTATAT+TGG | - | tig0010967:67711-67730 | None:intergenic | 25.0% |
| ! | TACCAATATGAAAATTTGAC+GGG | - | tig0010967:67805-67824 | None:intergenic | 25.0% |
| ! | TTGAATATGTGCATACAAAT+TGG | + | tig0010967:67853-67872 | Msa1349630:intron | 25.0% |
| ! | CAATTAAGAAATGTTCTTGA+AGG | - | tig0010967:68284-68303 | None:intergenic | 25.0% |
| ! | CTTCAAGAACATTTCTTAAT+TGG | + | tig0010967:68282-68301 | Msa1349630:CDS | 25.0% |
| ! | TTTGAAAGGTAAAACACAAA+AGG | - | tig0010967:68377-68396 | None:intergenic | 25.0% |
| ! | TCAATCACAATTTACAATCA+AGG | - | tig0010967:68981-69000 | None:intergenic | 25.0% |
| ! | AATTGTGATTGACTAATGTT+AGG | + | tig0010967:68989-69008 | Msa1349630:intron | 25.0% |
| !!! | TTTTGTCATTTTCCCTAAAA+TGG | + | tig0010967:69071-69090 | Msa1349630:intron | 25.0% |
| !!! | TTTGTCATTTTCCCTAAAAT+GGG | + | tig0010967:69072-69091 | Msa1349630:intron | 25.0% |
| ! | ATTTGTAATTTACTACTCCT+TGG | + | tig0010967:69192-69211 | Msa1349630:intron | 25.0% |
| !!! | AATTTATTTTTGTGCAAGCA+TGG | - | tig0010967:69253-69272 | None:intergenic | 25.0% |
| !!! | TAATTCAGTTGATGAGTTAA+GGG | + | tig0010967:69313-69332 | Msa1349630:intron | 25.0% |
| ! | AACGTGAACAAAAAGAAAAT+GGG | - | tig0010967:69518-69537 | None:intergenic | 25.0% |
| ! | TAACGTGAACAAAAAGAAAA+TGG | - | tig0010967:69519-69538 | None:intergenic | 25.0% |
| !!! | TACATCCAAAAGAAGTTTTT+TGG | + | tig0010967:69667-69686 | Msa1349630:intron | 25.0% |
| ! | CATAATGAGCTAACATATTT+AGG | + | tig0010967:70211-70230 | Msa1349630:intron | 25.0% |
| ! | TTTGAGAGTGTAAATGAAGT+AGG | - | tig0010967:63472-63491 | None:intergenic | 30.0% |
| TACAATGAGAAGAAAATGAG+AGG | + | tig0010967:63802-63821 | Msa1349630:CDS | 30.0% | |
| AGAAAATGAGAGGAATAGTA+TGG | + | tig0010967:63812-63831 | Msa1349630:CDS | 30.0% | |
| TTTCCATACACAAACAAACA+AGG | + | tig0010967:63907-63926 | Msa1349630:CDS | 30.0% | |
| !! | TTGTGACGGATAATTTGATT+AGG | + | tig0010967:64031-64050 | Msa1349630:CDS | 30.0% |
| !! | TGTGACGGATAATTTGATTA+GGG | + | tig0010967:64032-64051 | Msa1349630:CDS | 30.0% |
| ! | TTTTCTTATGGAATGGCTTA+TGG | + | tig0010967:64129-64148 | Msa1349630:CDS | 30.0% |
| AAATGGAAAGTTCACTCAAA+GGG | - | tig0010967:64406-64425 | None:intergenic | 30.0% | |
| AAAATGGAAAGTTCACTCAA+AGG | - | tig0010967:64407-64426 | None:intergenic | 30.0% | |
| ATATATAATTCATTTCCCGG+GGG | - | tig0010967:64481-64500 | None:intergenic | 30.0% | |
| TTCTCAACGTTACAATCTAA+TGG | + | tig0010967:64810-64829 | Msa1349630:intron | 30.0% | |
| TGTTGGTCCAAATTCAAATT+CGG | - | tig0010967:64867-64886 | None:intergenic | 30.0% | |
| CAATAAAAGAAATCACGAAG+AGG | - | tig0010967:64978-64997 | None:intergenic | 30.0% | |
| ! | CTCTTCGTGATTTCTTTTAT+TGG | + | tig0010967:64976-64995 | Msa1349630:intron | 30.0% |
| !!! | AACTCTTTTTTGTGGATGTA+GGG | - | tig0010967:65104-65123 | None:intergenic | 30.0% |
| TACATCCACAAAAAAGAGTT+CGG | + | tig0010967:65104-65123 | Msa1349630:intron | 30.0% | |
| !!! | ATAATCCGAACTCTTTTTTG+TGG | - | tig0010967:65112-65131 | None:intergenic | 30.0% |
| ACATAGTAGTCTATCAAGAT+CGG | - | tig0010967:65338-65357 | None:intergenic | 30.0% | |
| TTAAATGGATCATCTATTGC+GGG | - | tig0010967:65412-65431 | None:intergenic | 30.0% | |
| AAATACGGTCAAAGTAAGTT+AGG | - | tig0010967:65451-65470 | None:intergenic | 30.0% | |
| ATCAACTGTGTCAAGTATTA+TGG | + | tig0010967:65623-65642 | Msa1349630:intron | 30.0% | |
| TCAACTGTGTCAAGTATTAT+GGG | + | tig0010967:65624-65643 | Msa1349630:intron | 30.0% | |
| ATAAGCAGAAGAAAATCCAT+AGG | + | tig0010967:65986-66005 | Msa1349630:intron | 30.0% | |
| AAGACAAAGTAAGAAAGATG+TGG | - | tig0010967:66353-66372 | None:intergenic | 30.0% | |
| AATTGACATCAGGATTAAGT+GGG | - | tig0010967:66495-66514 | None:intergenic | 30.0% | |
| AAATTGACATCAGGATTAAG+TGG | - | tig0010967:66496-66515 | None:intergenic | 30.0% | |
| !! | CTTTAGAGCTGAATTTGAAT+TGG | - | tig0010967:66551-66570 | None:intergenic | 30.0% |
| ! | CAATTCAAATTCAGCTCTAA+AGG | + | tig0010967:66549-66568 | Msa1349630:intron | 30.0% |
| !! | TTTATCGATTCTGATAGTTC+TGG | + | tig0010967:66644-66663 | Msa1349630:intron | 30.0% |
| ! | TTTTGGTGAAGAAGTTAGAA+AGG | + | tig0010967:66688-66707 | Msa1349630:intron | 30.0% |
| !! | AGTACTATTTTTCCAGATCT+CGG | - | tig0010967:66914-66933 | None:intergenic | 30.0% |
| ATCTGGAAAAATAGTACTCA+TGG | + | tig0010967:66916-66935 | Msa1349630:intron | 30.0% | |
| CAACTAGACCATGATAAAAT+TGG | + | tig0010967:66972-66991 | Msa1349630:intron | 30.0% | |
| ! | GAGTAGTACCAATTTTATCA+TGG | - | tig0010967:66983-67002 | None:intergenic | 30.0% |
| GAAACTTGAGTGAATAGAAT+AGG | - | tig0010967:67138-67157 | None:intergenic | 30.0% | |
| !! | TAATGTTTTTCGACCAAACT+AGG | + | tig0010967:67321-67340 | Msa1349630:intron | 30.0% |
| TGAAAATAGAAGTCTCACAT+AGG | + | tig0010967:67462-67481 | Msa1349630:intron | 30.0% | |
| TGAAAATAGAAGTTTCACGT+TGG | + | tig0010967:67639-67658 | Msa1349630:intron | 30.0% | |
| AAAAGAGTTTATAAGCAACG+AGG | + | tig0010967:67678-67697 | Msa1349630:intron | 30.0% | |
| TTTGTTTAAGTGTCTAAGCT+TGG | - | tig0010967:67744-67763 | None:intergenic | 30.0% | |
| !!! | ATGAAAATTTGACGGGTTTT+GGG | - | tig0010967:67798-67817 | None:intergenic | 30.0% |
| !!! | TATGAAAATTTGACGGGTTT+TGG | - | tig0010967:67799-67818 | None:intergenic | 30.0% |
| ! | AACCCGTCAAATTTTCATAT+TGG | + | tig0010967:67800-67819 | Msa1349630:intron | 30.0% |
| TTACTAGTTCGAAATAGTGT+AGG | + | tig0010967:68616-68635 | Msa1349630:intron | 30.0% | |
| AAAACACACTCAAAACAAGT+TGG | - | tig0010967:68754-68773 | None:intergenic | 30.0% | |
| !!! | ACTTGTTTTGAGTGTGTTTT+AGG | + | tig0010967:68754-68773 | Msa1349630:intron | 30.0% |
| ! | TAACTTGCAAAACCTAATTG+TGG | + | tig0010967:68787-68806 | Msa1349630:intron | 30.0% |
| CAACATATGAAACCACAATT+AGG | - | tig0010967:68802-68821 | None:intergenic | 30.0% | |
| GATGTAGGTATATGTAAAGA+TGG | + | tig0010967:68942-68961 | Msa1349630:CDS | 30.0% | |
| AGATGGGAGAATAAATAACT+TGG | + | tig0010967:69273-69292 | Msa1349630:intron | 30.0% | |
| !! | GTAATTCAGTTGATGAGTTA+AGG | + | tig0010967:69312-69331 | Msa1349630:intron | 30.0% |
| CTTCATACCTAAAAAAAACC+CGG | + | tig0010967:69367-69386 | Msa1349630:intron | 30.0% | |
| !! | TTAAATTTGGTGTTCAGAGT+TGG | - | tig0010967:69433-69452 | None:intergenic | 30.0% |
| ACGTGAACAAAAAGAAAATG+GGG | - | tig0010967:69517-69536 | None:intergenic | 30.0% | |
| !!! | ACAGTAAGGTGTTTTGATAT+GGG | - | tig0010967:69636-69655 | None:intergenic | 30.0% |
| !!! | AACAGTAAGGTGTTTTGATA+TGG | - | tig0010967:69637-69656 | None:intergenic | 30.0% |
| ATATCAAAACACCTTACTGT+TGG | + | tig0010967:69636-69655 | Msa1349630:intron | 30.0% | |
| TATCAAAACACCTTACTGTT+GGG | + | tig0010967:69637-69656 | Msa1349630:intron | 30.0% | |
| TGGAAATTGTATTCTAACGA+TGG | - | tig0010967:69695-69714 | None:intergenic | 30.0% | |
| GATCATGAGAAGATTGAATA+TGG | - | tig0010967:69715-69734 | None:intergenic | 30.0% | |
| ! | CATTATTATAGGTTGGATAC+TGG | - | tig0010967:69797-69816 | None:intergenic | 30.0% |
| AGAGGAATCTAGTATATTGT+TGG | - | tig0010967:69859-69878 | None:intergenic | 30.0% | |
| TACTTTCGTATCCATAACAA+AGG | + | tig0010967:70018-70037 | Msa1349630:intron | 30.0% | |
| !! | GAGATTGATTTTCTCTCTTT+TGG | + | tig0010967:70130-70149 | Msa1349630:intron | 30.0% |
| !! | ATTTAGGATTTTCTCCACAT+AGG | + | tig0010967:70227-70246 | Msa1349630:intron | 30.0% |
| ACTCAGCAAAGATTATGCTA+TGG | + | tig0010967:63424-63443 | Msa1349630:CDS | 35.0% | |
| !! | GGTTCTTTTAGAAGAAGAAG+TGG | - | tig0010967:63580-63599 | None:intergenic | 35.0% |
| !! | TTGTTCCCAAAGTTTTGATG+AGG | - | tig0010967:63634-63653 | None:intergenic | 35.0% |
| AATGAGAGGAATAGTATGGA+TGG | + | tig0010967:63816-63835 | Msa1349630:CDS | 35.0% | |
| GTGAAAACAAATCTGAACGA+AGG | + | tig0010967:63847-63866 | Msa1349630:CDS | 35.0% | |
| !! | GTGTCAGTTGATATTTTCAC+CGG | - | tig0010967:63880-63899 | None:intergenic | 35.0% |
| ! | TGACCTTGTTTGTTTGTGTA+TGG | - | tig0010967:63913-63932 | None:intergenic | 35.0% |
| AACAATGCGTGAGATTCTAA+TGG | - | tig0010967:63944-63963 | None:intergenic | 35.0% | |
| ! | GGTGGATTTGCAATTAGTTA+TGG | + | tig0010967:64156-64175 | Msa1349630:CDS | 35.0% |
| ! | AAAAGCTCTAGTGAAAATGC+AGG | + | tig0010967:64185-64204 | Msa1349630:CDS | 35.0% |
| GTTCCACTTACCAAAGAAAT+CGG | + | tig0010967:64282-64301 | Msa1349630:CDS | 35.0% | |
| ! | AAACCGATTTCTTTGGTAAG+TGG | - | tig0010967:64288-64307 | None:intergenic | 35.0% |
| TGTAGGATTAAGACATGACT+TGG | + | tig0010967:64371-64390 | Msa1349630:intron | 35.0% | |
| GTAGGATTAAGACATGACTT+GGG | + | tig0010967:64372-64391 | Msa1349630:intron | 35.0% | |
| !!! | TTCTTTTTTCCTGTTAGGAG+TGG | + | tig0010967:64426-64445 | Msa1349630:intron | 35.0% |
| !!! | TCTTTTTTCCTGTTAGGAGT+GGG | + | tig0010967:64427-64446 | Msa1349630:intron | 35.0% |
| GGACAAAATGCTGTAAAAGT+TGG | - | tig0010967:64459-64478 | None:intergenic | 35.0% | |
| TATATAATTCATTTCCCGGG+GGG | - | tig0010967:64480-64499 | None:intergenic | 35.0% | |
| ATTGAGGAGGAAAAATGTGT+TGG | - | tig0010967:64884-64903 | None:intergenic | 35.0% | |
| TTATTTGGCTATTGAGCTAG+TGG | - | tig0010967:64946-64965 | None:intergenic | 35.0% | |
| !!! | GAACTCTTTTTTGTGGATGT+AGG | - | tig0010967:65105-65124 | None:intergenic | 35.0% |
| TGATATGACAAGTGACAACA+TGG | + | tig0010967:65359-65378 | Msa1349630:intron | 35.0% | |
| TGACAACATGGAATAACGAA+GGG | + | tig0010967:65371-65390 | Msa1349630:intron | 35.0% | |
| ATACTTCAGTGACTTAGCTT+AGG | + | tig0010967:65758-65777 | Msa1349630:intron | 35.0% | |
| ATGTAATGGTATGGTGACAT+TGG | + | tig0010967:65868-65887 | Msa1349630:intron | 35.0% | |
| ATCTGAGTTATAACTGCAGA+GGG | - | tig0010967:65937-65956 | None:intergenic | 35.0% | |
| TAAATGCCACCCTATGTAAA+AGG | - | tig0010967:66226-66245 | None:intergenic | 35.0% | |
| AAGTAAGAAAGATGTGGTGT+GGG | - | tig0010967:66347-66366 | None:intergenic | 35.0% | |
| AAAGTAAGAAAGATGTGGTG+TGG | - | tig0010967:66348-66367 | None:intergenic | 35.0% | |
| ! | AACATTTTCACCTCCATTTG+TGG | - | tig0010967:66449-66468 | None:intergenic | 35.0% |
| CGAGATTCAAAATTGACATC+AGG | - | tig0010967:66505-66524 | None:intergenic | 35.0% | |
| GGCAACATCAAACTACATAA+AGG | - | tig0010967:66729-66748 | None:intergenic | 35.0% | |
| CTTCATATCTAGGAATGAAG+CGG | - | tig0010967:66750-66769 | None:intergenic | 35.0% | |
| CATGAAGAAGCTTCATATCT+AGG | - | tig0010967:66760-66779 | None:intergenic | 35.0% | |
| ! | TACAGTGGTGTGAGATTTTA+TGG | + | tig0010967:66829-66848 | Msa1349630:intron | 35.0% |
| TGGAAAAATAGTACTCATGG+AGG | + | tig0010967:66919-66938 | Msa1349630:intron | 35.0% | |
| GGTACTACTCATTGATCTAA+TGG | + | tig0010967:66993-67012 | Msa1349630:intron | 35.0% | |
| CACAAATTTGTGCATTGTGT+AGG | + | tig0010967:67060-67079 | Msa1349630:intron | 35.0% | |
| CTAAATGCCACCTTTACATA+GGG | + | tig0010967:67083-67102 | Msa1349630:intron | 35.0% | |
| !! | ACCATTTCTAGTGCAATTCA+TGG | + | tig0010967:67176-67195 | Msa1349630:intron | 35.0% |
| TCCATGAATTGCACTAGAAA+TGG | - | tig0010967:67180-67199 | None:intergenic | 35.0% | |
| TGGTCATAAAAGACCTAGTT+TGG | - | tig0010967:67337-67356 | None:intergenic | 35.0% | |
| TGGTTTAATCAGAGTGATCT+TGG | + | tig0010967:67393-67412 | Msa1349630:intron | 35.0% | |
| CGACACAAAAAGTCAATACA+TGG | + | tig0010967:67556-67575 | Msa1349630:intron | 35.0% | |
| AATAGTCCATGTGTGTTTCT+TGG | + | tig0010967:67977-67996 | Msa1349630:intron | 35.0% | |
| TTGGAACAGTATGATGTGTA+TGG | + | tig0010967:67996-68015 | Msa1349630:intron | 35.0% | |
| TGGAACAGTATGATGTGTAT+GGG | + | tig0010967:67997-68016 | Msa1349630:intron | 35.0% | |
| ATGTGTATGGGAACCTATTT+GGG | + | tig0010967:68009-68028 | Msa1349630:CDS | 35.0% | |
| ! | CTTTTCTTTGTCGTAACAGA+TGG | - | tig0010967:68183-68202 | None:intergenic | 35.0% |
| GTTACGACAAAGAAAAGAGA+TGG | + | tig0010967:68186-68205 | Msa1349630:CDS | 35.0% | |
| ATGGACCATTTCAGTTTCAT+GGG | + | tig0010967:68205-68224 | Msa1349630:CDS | 35.0% | |
| AAAACCCCATGAAACTGAAA+TGG | - | tig0010967:68213-68232 | None:intergenic | 35.0% | |
| !! | TTTGCTGTTCAGATATTTCG+CGG | + | tig0010967:68230-68249 | Msa1349630:CDS | 35.0% |
| !! | TTGAAGGCATTTCAATTTCG+CGG | - | tig0010967:68268-68287 | None:intergenic | 35.0% |
| !!! | AAGGATTAGCCATTTTCCAT+CGG | - | tig0010967:68472-68491 | None:intergenic | 35.0% |
| GTTCGAAATAGTGTAGGATA+CGG | + | tig0010967:68622-68641 | Msa1349630:intron | 35.0% | |
| GTGATGAAGTCAAACAAGAA+AGG | + | tig0010967:68906-68925 | Msa1349630:CDS | 35.0% | |
| GTCAAACAAGAAAGGAAGAA+TGG | + | tig0010967:68914-68933 | Msa1349630:CDS | 35.0% | |
| AGGTATATGTAAAGATGGTG+AGG | + | tig0010967:68947-68966 | Msa1349630:CDS | 35.0% | |
| ! | TCATTTTCCCTAAAATGGGA+TGG | + | tig0010967:69076-69095 | Msa1349630:intron | 35.0% |
| ! | CATTTTCCCTAAAATGGGAT+GGG | + | tig0010967:69077-69096 | Msa1349630:intron | 35.0% |
| ! | ATTTTCCCTAAAATGGGATG+GGG | + | tig0010967:69078-69097 | Msa1349630:intron | 35.0% |
| AGAAGCAAATATCATCTCCA+AGG | - | tig0010967:69212-69231 | None:intergenic | 35.0% | |
| TGAGTTAAGGGACACAAAAT+CGG | + | tig0010967:69325-69344 | Msa1349630:intron | 35.0% | |
| GTATGTATTACCCAACAGTA+AGG | - | tig0010967:69650-69669 | None:intergenic | 35.0% | |
| ! | TGGCACCAAAAAACTTCTTT+TGG | - | tig0010967:69675-69694 | None:intergenic | 35.0% |
| ATAGATATTCAGAGAGTCAG+AGG | + | tig0010967:69742-69761 | Msa1349630:intron | 35.0% | |
| TAGATATTCAGAGAGTCAGA+GGG | + | tig0010967:69743-69762 | Msa1349630:intron | 35.0% | |
| ! | ATAGGTTGGATACTGGAATT+TGG | - | tig0010967:69790-69809 | None:intergenic | 35.0% |
| ! | GTGGAAAGCATAGATTATAG+AGG | - | tig0010967:69877-69896 | None:intergenic | 35.0% |
| TTGTTGTGTGGGATTCACTA+AGG | - | tig0010967:63388-63407 | None:intergenic | 40.0% | |
| TTTGCTGAGTGTGAATGTGA+AGG | - | tig0010967:63414-63433 | None:intergenic | 40.0% | |
| AGTAGGTTAGAGAAACAGCT+AGG | - | tig0010967:63455-63474 | None:intergenic | 40.0% | |
| ATGGTTGCAATTGCTTGAAG+TGG | - | tig0010967:63502-63521 | None:intergenic | 40.0% | |
| ACTTCAAGCAATTGCAACCA+TGG | + | tig0010967:63501-63520 | Msa1349630:CDS | 40.0% | |
| GATTGATGGAAAATGGACCA+TGG | - | tig0010967:63521-63540 | None:intergenic | 40.0% | |
| GAGTGGTGATTGATGGAAAA+TGG | - | tig0010967:63528-63547 | None:intergenic | 40.0% | |
| TTGCAGCCTCATCAAAACTT+TGG | + | tig0010967:63625-63644 | Msa1349630:CDS | 40.0% | |
| TGCAGCCTCATCAAAACTTT+GGG | + | tig0010967:63626-63645 | Msa1349630:CDS | 40.0% | |
| GTACTAGCTAATCGTCTGAT+TGG | + | tig0010967:63681-63700 | Msa1349630:intron | 40.0% | |
| GTCAGTCGATTGTAGTCAAT+TGG | + | tig0010967:63738-63757 | Msa1349630:intron | 40.0% | |
| !! | TCAGTTGATATTTTCACCGG+TGG | - | tig0010967:63877-63896 | None:intergenic | 40.0% |
| AATGCGTGAGATTCTAATGG+CGG | - | tig0010967:63941-63960 | None:intergenic | 40.0% | |
| TTTCCGAGACATTGCGTTTA+GGG | + | tig0010967:63962-63981 | Msa1349630:CDS | 40.0% | |
| ! | GTTTAGGGCTTAAAGATGTG+CGG | + | tig0010967:63977-63996 | Msa1349630:CDS | 40.0% |
| TCTTATGGAATGGCTTATGG+TGG | + | tig0010967:64132-64151 | Msa1349630:CDS | 40.0% | |
| TGCAGGATCGTTGTATTCAT+AGG | + | tig0010967:64202-64221 | Msa1349630:CDS | 40.0% | |
| CGTTGTATTCATAGGTATCC+TGG | + | tig0010967:64210-64229 | Msa1349630:CDS | 40.0% | |
| ! | CATAGGTATCCTGGTCTTTA+TGG | + | tig0010967:64219-64238 | Msa1349630:CDS | 40.0% |
| TCATCAGAACCATAAAGACC+AGG | - | tig0010967:64231-64250 | None:intergenic | 40.0% | |
| TGATCGAATGCAAGCTTGTA+TGG | + | tig0010967:64248-64267 | Msa1349630:CDS | 40.0% | |
| ! | CTGGTGAAAACCGATTTCTT+TGG | - | tig0010967:64295-64314 | None:intergenic | 40.0% |
| !! | CAAAGAAATCGGTTTTCACC+AGG | + | tig0010967:64293-64312 | Msa1349630:CDS | 40.0% |
| GTGTCTTCTTGTGTATGTGT+AGG | + | tig0010967:64354-64373 | Msa1349630:intron | 40.0% | |
| !! | CTTCTTAACTTGTGCCTTGA+GGG | - | tig0010967:64601-64620 | None:intergenic | 40.0% |
| !! | ACTTCTTAACTTGTGCCTTG+AGG | - | tig0010967:64602-64621 | None:intergenic | 40.0% |
| TTGCTTAACATGTGCCCTAA+GGG | + | tig0010967:64754-64773 | Msa1349630:intron | 40.0% | |
| !! | CATGTTAACTTGTGCCCTTA+GGG | - | tig0010967:64771-64790 | None:intergenic | 40.0% |
| !! | TCATGTTAACTTGTGCCCTT+AGG | - | tig0010967:64772-64791 | None:intergenic | 40.0% |
| !! | GGACGGTTGCTATTTGAAAT+TGG | - | tig0010967:65317-65336 | None:intergenic | 40.0% |
| AGTAGTCTATCAAGATCGGA+CGG | - | tig0010967:65334-65353 | None:intergenic | 40.0% | |
| GTGACAACATGGAATAACGA+AGG | + | tig0010967:65370-65389 | Msa1349630:intron | 40.0% | |
| GACAACATGGAATAACGAAG+GGG | + | tig0010967:65372-65391 | Msa1349630:intron | 40.0% | |
| CTGTGTCAAGTATTATGGGA+TGG | + | tig0010967:65628-65647 | Msa1349630:intron | 40.0% | |
| TGTCAAGTATTATGGGATGG+AGG | + | tig0010967:65631-65650 | Msa1349630:intron | 40.0% | |
| GTCAAGTATTATGGGATGGA+GGG | + | tig0010967:65632-65651 | Msa1349630:intron | 40.0% | |
| AGCGACTTTACACTAAGGAA+TGG | + | tig0010967:65719-65738 | Msa1349630:intron | 40.0% | |
| GCGACTTTACACTAAGGAAT+GGG | + | tig0010967:65720-65739 | Msa1349630:intron | 40.0% | |
| !! | TAAGGAATGGGCTCTCTTTT+GGG | + | tig0010967:65732-65751 | Msa1349630:intron | 40.0% |
| CACACATTCACATGCATCAA+CGG | - | tig0010967:65813-65832 | None:intergenic | 40.0% | |
| TTGATGCATGTGAATGTGTG+TGG | + | tig0010967:65813-65832 | Msa1349630:intron | 40.0% | |
| TGATGCATGTGAATGTGTGT+GGG | + | tig0010967:65814-65833 | Msa1349630:intron | 40.0% | |
| !! | AACCACTTTGGTGCCATTAA+TGG | - | tig0010967:65896-65915 | None:intergenic | 40.0% |
| GATCTGAGTTATAACTGCAG+AGG | - | tig0010967:65938-65957 | None:intergenic | 40.0% | |
| !! | TTAGATTTTGACCCAGGGAA+GGG | - | tig0010967:65963-65982 | None:intergenic | 40.0% |
| !! | TTTAGATTTTGACCCAGGGA+AGG | - | tig0010967:65964-65983 | None:intergenic | 40.0% |
| !! | TGTTCAGCCGTTAAGTTGAT+CGG | + | tig0010967:66108-66127 | Msa1349630:intron | 40.0% |
| GCAACAACCGATCAACTTAA+CGG | - | tig0010967:66118-66137 | None:intergenic | 40.0% | |
| TTGATCGGTTGTTGCTGAAA+TGG | + | tig0010967:66123-66142 | Msa1349630:intron | 40.0% | |
| ! | ACACATCCTTTTACATAGGG+TGG | + | tig0010967:66217-66236 | Msa1349630:intron | 40.0% |
| CACAAATTTGTGCAGTGTGT+AGG | - | tig0010967:66250-66269 | None:intergenic | 40.0% | |
| !! | ATCGTGCTATTGGTTTGGTA+GGG | - | tig0010967:66412-66431 | None:intergenic | 40.0% |
| ! | ATTTTCACCTCCATTTGTGG+AGG | - | tig0010967:66446-66465 | None:intergenic | 40.0% |
| !! | TCAGCTCTAAAGGTGTCAAA+AGG | + | tig0010967:66559-66578 | Msa1349630:intron | 40.0% |
| GAATGTAAAAGTCCGAGATC+TGG | + | tig0010967:66899-66918 | Msa1349630:intron | 40.0% | |
| GCTAAATGCCACCTTTACAT+AGG | + | tig0010967:67082-67101 | Msa1349630:intron | 40.0% | |
| CTAGTGCAATTCATGGAAAG+TGG | + | tig0010967:67183-67202 | Msa1349630:intron | 40.0% | |
| TAGTGAGACCAAAAGAGTCT+AGG | + | tig0010967:67495-67514 | Msa1349630:intron | 40.0% | |
| ! | ACCAAAAGAGTCTAGGATCA+CGG | + | tig0010967:67502-67521 | Msa1349630:intron | 40.0% |
| GTCGAGATATGAGTACTCTT+TGG | - | tig0010967:67540-67559 | None:intergenic | 40.0% | |
| AGTCACTAAAGAGACCATTC+CGG | + | tig0010967:67596-67615 | Msa1349630:intron | 40.0% | |
| ACCATTCCGGTTAAACTTGA+GGG | + | tig0010967:67609-67628 | Msa1349630:intron | 40.0% | |
| CATTCTCCCTCAAGTTTAAC+CGG | - | tig0010967:67618-67637 | None:intergenic | 40.0% | |
| GTTTAAGTGTCTAAGCTTGG+AGG | - | tig0010967:67741-67760 | None:intergenic | 40.0% | |
| ACTGTTCCAAGAAACACACA+TGG | - | tig0010967:67986-68005 | None:intergenic | 40.0% | |
| GATGTGTATGGGAACCTATT+TGG | + | tig0010967:68008-68027 | Msa1349630:CDS | 40.0% | |
| AGTGATACCAATGGAGTTAC+TGG | - | tig0010967:68050-68069 | None:intergenic | 40.0% | |
| CGAGCTTCATTGGTATTGTA+AGG | - | tig0010967:68136-68155 | None:intergenic | 40.0% | |
| GATGGACCATTTCAGTTTCA+TGG | + | tig0010967:68204-68223 | Msa1349630:CDS | 40.0% | |
| TGGACCATTTCAGTTTCATG+GGG | + | tig0010967:68206-68225 | Msa1349630:CDS | 40.0% | |
| ! | TTGCTGTTCAGATATTTCGC+GGG | + | tig0010967:68231-68250 | Msa1349630:CDS | 40.0% |
| !! | TGAAGGCATTTCAATTTCGC+GGG | - | tig0010967:68267-68286 | None:intergenic | 40.0% |
| AACACAAAAGGCTTCTGACA+CGG | - | tig0010967:68365-68384 | None:intergenic | 40.0% | |
| ACAACTTTGTCAAGAGCAGA+AGG | - | tig0010967:68491-68510 | None:intergenic | 40.0% | |
| AATATATTTGGCAGGCTCCA+AGG | + | tig0010967:68868-68887 | Msa1349630:intron | 40.0% | |
| CAAGAAAGGAAGAATGGTGA+TGG | + | tig0010967:68920-68939 | Msa1349630:CDS | 40.0% | |
| ACTTGGATTTAGTCGCACAT+AGG | + | tig0010967:69290-69309 | Msa1349630:intron | 40.0% | |
| !!! | CTCAAAGCCGGGTTTTTTTT+AGG | - | tig0010967:69377-69396 | None:intergenic | 40.0% |
| ! | ACAGACTTTGATGATTGGCA+TGG | - | tig0010967:69612-69631 | None:intergenic | 40.0% |
| ! | TGGGAACAGACTTTGATGAT+TGG | - | tig0010967:69617-69636 | None:intergenic | 40.0% |
| AGATATTCAGAGAGTCAGAG+GGG | + | tig0010967:69744-69763 | Msa1349630:intron | 40.0% | |
| CTGTGTTCTTAACATTGGTG+TGG | - | tig0010967:69896-69915 | None:intergenic | 40.0% | |
| AGCGACTGTGTTCTTAACAT+TGG | - | tig0010967:69901-69920 | None:intergenic | 40.0% | |
| ATTGCAGATTCGTTAACCGT+TGG | - | tig0010967:70078-70097 | None:intergenic | 40.0% | |
| !! | CAATCGCTGTTTTACAGAGA+CGG | + | tig0010967:70094-70113 | Msa1349630:intron | 40.0% |
| ! | AGGATTTTCTCCACATAGGA+AGG | + | tig0010967:70231-70250 | Msa1349630:intron | 40.0% |
| ! | GGATTTTCTCCACATAGGAA+GGG | + | tig0010967:70232-70251 | Msa1349630:intron | 40.0% |
| TTTCCTCCACATAGTTGTGT+GGG | - | tig0010967:70281-70300 | None:intergenic | 40.0% | |
| ATTTCCTCCACATAGTTGTG+TGG | - | tig0010967:70282-70301 | None:intergenic | 40.0% | |
| TGTGGAGGAAATCATCAAAC+CGG | + | tig0010967:70290-70309 | Msa1349630:CDS | 40.0% | |
| !! | GAAACTTGTTGTGATATCGC+CGG | - | tig0010967:70312-70331 | None:intergenic | 40.0% |
| ! | TGAGTAAAGCGTTACGAAGA+GGG | - | tig0010967:70341-70360 | None:intergenic | 40.0% |
| ! | ATGAGTAAAGCGTTACGAAG+AGG | - | tig0010967:70342-70361 | None:intergenic | 40.0% |
| GTGTGGGATTCACTAAGGTT+GGG | - | tig0010967:63383-63402 | None:intergenic | 45.0% | |
| TGTGTGGGATTCACTAAGGT+TGG | - | tig0010967:63384-63403 | None:intergenic | 45.0% | |
| TGTGAAGGTCGTTGTTGTGT+GGG | - | tig0010967:63399-63418 | None:intergenic | 45.0% | |
| ATGTGAAGGTCGTTGTTGTG+TGG | - | tig0010967:63400-63419 | None:intergenic | 45.0% | |
| ! | CTTCTAAAAGAACCGAGCTC+CGG | + | tig0010967:63586-63605 | Msa1349630:CDS | 45.0% |
| CAATTCCGAACACTACATGC+CGG | - | tig0010967:63608-63627 | None:intergenic | 45.0% | |
| TGACTACAATCGACTGACGT+TGG | - | tig0010967:63736-63755 | None:intergenic | 45.0% | |
| ! | GTGAGATTCTAATGGCGGAA+CGG | - | tig0010967:63936-63955 | None:intergenic | 45.0% |
| GTTTCCGAGACATTGCGTTT+AGG | + | tig0010967:63961-63980 | Msa1349630:CDS | 45.0% | |
| AAGCCCTAAACGCAATGTCT+CGG | - | tig0010967:63968-63987 | None:intergenic | 45.0% | |
| ! | CGATGACACGGTTTTTGTGA+CGG | + | tig0010967:64017-64036 | Msa1349630:CDS | 45.0% |
| TATGGAATGGCTTATGGTGG+TGG | + | tig0010967:64135-64154 | Msa1349630:CDS | 45.0% | |
| CAAGCTTGTATGGCTGAACT+TGG | + | tig0010967:64258-64277 | Msa1349630:CDS | 45.0% | |
| ! | TTTACAGCATTTTGTCCCCC+CGG | + | tig0010967:64462-64481 | Msa1349630:intron | 45.0% |
| ! | AATGGTAACTTGTGCCCTCA+AGG | + | tig0010967:64584-64603 | Msa1349630:intron | 45.0% |
| GTTGCTTAACATGTGCCCTA+AGG | + | tig0010967:64753-64772 | Msa1349630:intron | 45.0% | |
| CTAGTGGTCACACATACTAG+TGG | - | tig0010967:64930-64949 | None:intergenic | 45.0% | |
| ATGGATCATCTATTGCGGGA+CGG | - | tig0010967:65408-65427 | None:intergenic | 45.0% | |
| ATGTGTGCCCCTAGAATTCA+AGG | + | tig0010967:65665-65684 | Msa1349630:intron | 45.0% | |
| GGACCTACCTTGAATTCTAG+GGG | - | tig0010967:65675-65694 | None:intergenic | 45.0% | |
| GGGACCTACCTTGAATTCTA+GGG | - | tig0010967:65676-65695 | None:intergenic | 45.0% | |
| TGGGACCTACCTTGAATTCT+AGG | - | tig0010967:65677-65696 | None:intergenic | 45.0% | |
| GCACAAGCGACTTTACACTA+AGG | + | tig0010967:65714-65733 | Msa1349630:intron | 45.0% | |
| !! | CTAAGGAATGGGCTCTCTTT+TGG | + | tig0010967:65731-65750 | Msa1349630:intron | 45.0% |
| !! | AAGGAATGGGCTCTCTTTTG+GGG | + | tig0010967:65733-65752 | Msa1349630:intron | 45.0% |
| ! | TGACTTAGCTTAGGTGCCAT+TGG | + | tig0010967:65767-65786 | Msa1349630:intron | 45.0% |
| GATTTCTCCAATGGCACCAA+TGG | - | tig0010967:65786-65805 | None:intergenic | 45.0% | |
| AACGGTCAGGATTTCTCCAA+TGG | - | tig0010967:65795-65814 | None:intergenic | 45.0% | |
| ATTCACATGCATCAACGGTC+AGG | - | tig0010967:65808-65827 | None:intergenic | 45.0% | |
| ! | TGTGTGTGGTGGAGATGTAA+TGG | + | tig0010967:65854-65873 | Msa1349630:intron | 45.0% |
| ! | GTGGTGGAGATGTAATGGTA+TGG | + | tig0010967:65859-65878 | Msa1349630:intron | 45.0% |
| !! | GGTGACATTGGTGCCATTAA+TGG | + | tig0010967:65880-65899 | Msa1349630:intron | 45.0% |
| TGCCATTAATGGCACCAAAG+TGG | + | tig0010967:65891-65910 | Msa1349630:intron | 45.0% | |
| CAAAACAGAGGGAACCACTT+TGG | - | tig0010967:65908-65927 | None:intergenic | 45.0% | |
| GATTGTCACGTATGCATGCA+TGG | + | tig0010967:66050-66069 | Msa1349630:intron | 45.0% | |
| CGGTTGTTGCTGAAATGGAT+TGG | + | tig0010967:66128-66147 | Msa1349630:intron | 45.0% | |
| TGGTGAAAAGAGGGAGATAG+TGG | - | tig0010967:66379-66398 | None:intergenic | 45.0% | |
| !! | TGGTGTTGGTGGTGAAAAGA+GGG | - | tig0010967:66388-66407 | None:intergenic | 45.0% |
| !! | ATGGTGTTGGTGGTGAAAAG+AGG | - | tig0010967:66389-66408 | None:intergenic | 45.0% |
| !! | TGCTATTGGTTTGGTAGGGA+TGG | - | tig0010967:66408-66427 | None:intergenic | 45.0% |
| !! | CATCGTGCTATTGGTTTGGT+AGG | - | tig0010967:66413-66432 | None:intergenic | 45.0% |
| CTACCAAACCAATAGCACGA+TGG | + | tig0010967:66411-66430 | Msa1349630:CDS | 45.0% | |
| ! | TGACCATCGTGCTATTGGTT+TGG | - | tig0010967:66417-66436 | None:intergenic | 45.0% |
| ACATCAGGATTAAGTGGGTG+AGG | - | tig0010967:66490-66509 | None:intergenic | 45.0% | |
| AATGCCACCTTTACATAGGG+TGG | + | tig0010967:67086-67105 | Msa1349630:intron | 45.0% | |
| ATGCCACCTTTACATAGGGT+GGG | + | tig0010967:67087-67106 | Msa1349630:intron | 45.0% | |
| ! | ACCGTGATCCTAGACTCTTT+TGG | - | tig0010967:67506-67525 | None:intergenic | 45.0% |
| GACCATTCCGGTTAAACTTG+AGG | + | tig0010967:67608-67627 | Msa1349630:intron | 45.0% | |
| TCCCTCAAGTTTAACCGGAA+TGG | - | tig0010967:67613-67632 | None:intergenic | 45.0% | |
| GTGTCTAAGCTTGGAGGTTT+AGG | - | tig0010967:67735-67754 | None:intergenic | 45.0% | |
| ! | TTTGGGACAGGCTCAATTTG+AGG | - | tig0010967:67781-67800 | None:intergenic | 45.0% |
| !!! | AATTTGACGGGTTTTGGGAC+AGG | - | tig0010967:67793-67812 | None:intergenic | 45.0% |
| AGCTCATCCAGTAACTCCAT+TGG | + | tig0010967:68040-68059 | Msa1349630:CDS | 45.0% | |
| AGATGGTGCAGTGATACCAA+TGG | - | tig0010967:68059-68078 | None:intergenic | 45.0% | |
| !! | GAAGGCATTTCAATTTCGCG+GGG | - | tig0010967:68266-68285 | None:intergenic | 45.0% |
| ACACAAAAGGCTTCTGACAC+GGG | - | tig0010967:68364-68383 | None:intergenic | 45.0% | |
| !! | AAAGCATCGTGTTCCTCATC+CGG | + | tig0010967:68442-68461 | Msa1349630:CDS | 45.0% |
| GTACTCTATCCCATAGATGC+GGG | - | tig0010967:68532-68551 | None:intergenic | 45.0% | |
| CGTACTCTATCCCATAGATG+CGG | - | tig0010967:68533-68552 | None:intergenic | 45.0% | |
| !! | GGAAGAATGGTGATGGATGT+AGG | + | tig0010967:68927-68946 | Msa1349630:CDS | 45.0% |
| ACACAAAATCGGAGTGATCG+AGG | + | tig0010967:69336-69355 | Msa1349630:intron | 45.0% | |
| ATCGGAGTGATCGAGGAAAT+CGG | + | tig0010967:69343-69362 | Msa1349630:intron | 45.0% | |
| TCCTTGTGCTTGGCATTTCT+GGG | + | tig0010967:69928-69947 | Msa1349630:intron | 45.0% | |
| GGTTCGCAACACCTTTGTTA+TGG | - | tig0010967:70032-70051 | None:intergenic | 45.0% | |
| AGATTCGTTAACCGTTGGAC+CGG | - | tig0010967:70073-70092 | None:intergenic | 45.0% | |
| TTCCTCCACATAGTTGTGTG+GGG | - | tig0010967:70280-70299 | None:intergenic | 45.0% | |
| GCTGGAAGAGTGGTGATTGA+TGG | - | tig0010967:63535-63554 | None:intergenic | 50.0% | |
| ! | CTGCATTGATGCTGGAAGAG+TGG | - | tig0010967:63545-63564 | None:intergenic | 50.0% |
| ! | GCTGTTTGCTGCATTGATGC+TGG | - | tig0010967:63553-63572 | None:intergenic | 50.0% |
| TCTGAACGAAGGTCTACCAC+CGG | + | tig0010967:63858-63877 | Msa1349630:CDS | 50.0% | |
| TAGGGCTTAAAGATGTGCGG+TGG | + | tig0010967:63980-63999 | Msa1349630:CDS | 50.0% | |
| ! | AGATGTGCGGTGGTTTGTGA+TGG | + | tig0010967:63990-64009 | Msa1349630:CDS | 50.0% |
| ! | GATGTGCGGTGGTTTGTGAT+GGG | + | tig0010967:63991-64010 | Msa1349630:CDS | 50.0% |
| ! | TGTGATGGGAGACGATGACA+CGG | + | tig0010967:64005-64024 | Msa1349630:CDS | 50.0% |
| ! | TTACAGCATTTTGTCCCCCC+GGG | + | tig0010967:64463-64482 | Msa1349630:intron | 50.0% |
| ATCATCTATTGCGGGACGGA+GGG | - | tig0010967:65404-65423 | None:intergenic | 50.0% | |
| GTGCCCCTAGAATTCAAGGT+AGG | + | tig0010967:65669-65688 | Msa1349630:intron | 50.0% | |
| !! | TTAGGTGCCATTGGTGCCAT+TGG | + | tig0010967:65776-65795 | Msa1349630:intron | 50.0% |
| GTGTGTGTGATGTGTGTGTG+TGG | + | tig0010967:65840-65859 | Msa1349630:intron | 50.0% | |
| TGTGTGATGTGTGTGTGTGG+TGG | + | tig0010967:65843-65862 | Msa1349630:intron | 50.0% | |
| ! | GAGGGCACACACAAAACAGA+GGG | - | tig0010967:65919-65938 | None:intergenic | 50.0% |
| ! | AGAGGGCACACACAAAACAG+AGG | - | tig0010967:65920-65939 | None:intergenic | 50.0% |
| AACTCAGATCATCCCTTCCC+TGG | + | tig0010967:65948-65967 | Msa1349630:intron | 50.0% | |
| ACTCAGATCATCCCTTCCCT+GGG | + | tig0010967:65949-65968 | Msa1349630:intron | 50.0% | |
| ! | TTTGGTAGGGATGGTGTTGG+TGG | - | tig0010967:66399-66418 | None:intergenic | 50.0% |
| !! | TGGTTTGGTAGGGATGGTGT+TGG | - | tig0010967:66402-66421 | None:intergenic | 50.0% |
| TTCACCTCCATTTGTGGAGG+AGG | - | tig0010967:66443-66462 | None:intergenic | 50.0% | |
| ! | AAGAGTCTAGGATCACGGTG+AGG | + | tig0010967:67507-67526 | Msa1349630:intron | 50.0% |
| GAGCTGCAAGAAGCCCAAAT+AGG | - | tig0010967:68025-68044 | None:intergenic | 50.0% | |
| ATCACTGCACCATCTTGACG+TGG | + | tig0010967:68064-68083 | Msa1349630:CDS | 50.0% | |
| TTGGCTCAACCACGTCAAGA+TGG | - | tig0010967:68076-68095 | None:intergenic | 50.0% | |
| CTTGTGGCATTCGGGAAGAT+TGG | - | tig0010967:68095-68114 | None:intergenic | 50.0% | |
| CTTCCACTCTTGTGGCATTC+GGG | - | tig0010967:68103-68122 | None:intergenic | 50.0% | |
| GCTTCCACTCTTGTGGCATT+CGG | - | tig0010967:68104-68123 | None:intergenic | 50.0% | |
| ! | TTGAAGCGCTTCCACTCTTG+TGG | - | tig0010967:68111-68130 | None:intergenic | 50.0% |
| TCCGGAATGCCGATGGAAAA+TGG | + | tig0010967:68460-68479 | Msa1349630:CDS | 50.0% | |
| !! | GCCATTTTCCATCGGCATTC+CGG | - | tig0010967:68464-68483 | None:intergenic | 50.0% |
| ACTCTGCAGCAGTTTCTCCT+TGG | - | tig0010967:68888-68907 | None:intergenic | 50.0% | |
| ! | CCACACCCCATCCCATTTTA+GGG | - | tig0010967:69086-69105 | None:intergenic | 50.0% |
| ! | TCCACACCCCATCCCATTTT+AGG | - | tig0010967:69087-69106 | None:intergenic | 50.0% |
| ATGGGGTGTGGAAAGTAGTG+TGG | + | tig0010967:69095-69114 | Msa1349630:intron | 50.0% | |
| TGGGGTGTGGAAAGTAGTGT+GGG | + | tig0010967:69096-69115 | Msa1349630:intron | 50.0% | |
| TCGGAGTGATCGAGGAAATC+GGG | + | tig0010967:69344-69363 | Msa1349630:intron | 50.0% | |
| CTTTGAGCAAGACGCATCGT+AGG | + | tig0010967:69390-69409 | Msa1349630:intron | 50.0% | |
| GTCCTTGTGCTTGGCATTTC+TGG | + | tig0010967:69927-69946 | Msa1349630:intron | 50.0% | |
| TCCCAGAAATGCCAAGCACA+AGG | - | tig0010967:69932-69951 | None:intergenic | 50.0% | |
| CTGCTCTCAAACAATCAGCC+CGG | + | tig0010967:70051-70070 | Msa1349630:intron | 50.0% | |
| AAACAATCAGCCCGGTCCAA+CGG | + | tig0010967:70059-70078 | Msa1349630:intron | 50.0% | |
| GATTCGTTAACCGTTGGACC+GGG | - | tig0010967:70072-70091 | None:intergenic | 50.0% | |
| TTGTGTGGGGGAGATCTGTT+GGG | - | tig0010967:70267-70286 | None:intergenic | 50.0% | |
| ATCTCCCCCACACAACTATG+TGG | + | tig0010967:70272-70291 | Msa1349630:CDS | 50.0% | |
| TCCTCCACATAGTTGTGTGG+GGG | - | tig0010967:70279-70298 | None:intergenic | 50.0% | |
| GAACACTACATGCCGGAGCT+CGG | - | tig0010967:63601-63620 | None:intergenic | 55.0% | |
| GAGCTCCGGCATGTAGTGTT+CGG | + | tig0010967:63600-63619 | Msa1349630:CDS | 55.0% | |
| !! | GGAATGGCTTATGGTGGTGG+TGG | + | tig0010967:64138-64157 | Msa1349630:CDS | 55.0% |
| GGCAGTTACCCACTCCTAAC+AGG | - | tig0010967:64438-64457 | None:intergenic | 55.0% | |
| GATCATCTATTGCGGGACGG+AGG | - | tig0010967:65405-65424 | None:intergenic | 55.0% | |
| TCCCACGTTGTACCAAGCTC+TGG | + | tig0010967:65692-65711 | Msa1349630:intron | 55.0% | |
| GCCAGAGCTTGGTACAACGT+GGG | - | tig0010967:65696-65715 | None:intergenic | 55.0% | |
| TGCCAGAGCTTGGTACAACG+TGG | - | tig0010967:65697-65716 | None:intergenic | 55.0% | |
| AAGTCGCTTGTGCCAGAGCT+TGG | - | tig0010967:65707-65726 | None:intergenic | 55.0% | |
| GGAGGTGACCATCGTGCTAT+TGG | - | tig0010967:66422-66441 | None:intergenic | 55.0% | |
| GTCACCTCCTCCTCCACAAA+TGG | + | tig0010967:66433-66452 | Msa1349630:CDS | 55.0% | |
| ACCTCCTCCTCCACAAATGG+AGG | + | tig0010967:66436-66455 | Msa1349630:CDS | 55.0% | |
| ACCTCCATTTGTGGAGGAGG+AGG | - | tig0010967:66440-66459 | None:intergenic | 55.0% | |
| CCACCCACCCTATGTAAAGG+TGG | - | tig0010967:67093-67112 | None:intergenic | 55.0% | |
| CCACCTTTACATAGGGTGGG+TGG | + | tig0010967:67090-67109 | Msa1349630:intron | 55.0% | |
| CCACCACCCACCCTATGTAA+AGG | - | tig0010967:67096-67115 | None:intergenic | 55.0% | |
| CCTTTACATAGGGTGGGTGG+TGG | + | tig0010967:67093-67112 | Msa1349630:intron | 55.0% | |
| CTTCCCGAATGCCACAAGAG+TGG | + | tig0010967:68097-68116 | Msa1349630:CDS | 55.0% | |
| CCTGCTGAGTCGAGCTTCAT+TGG | - | tig0010967:68146-68165 | None:intergenic | 55.0% | |
| CCAATGAAGCTCGACTCAGC+AGG | + | tig0010967:68143-68162 | Msa1349630:CDS | 55.0% | |
| !! | GACACGGGTGTCGAGTAACA+GGG | - | tig0010967:68349-68368 | None:intergenic | 55.0% |
| !! | TGACACGGGTGTCGAGTAAC+AGG | - | tig0010967:68350-68369 | None:intergenic | 55.0% |
| TTCCTCATCCGGAATGCCGA+TGG | + | tig0010967:68453-68472 | Msa1349630:CDS | 55.0% | |
| TTCCATCGGCATTCCGGATG+AGG | - | tig0010967:68458-68477 | None:intergenic | 55.0% | |
| AGAAGCCAGACCCGCATCTA+TGG | + | tig0010967:68519-68538 | Msa1349630:CDS | 55.0% | |
| GAAGCCAGACCCGCATCTAT+GGG | + | tig0010967:68520-68539 | Msa1349630:CDS | 55.0% | |
| CTATCCCATAGATGCGGGTC+TGG | - | tig0010967:68527-68546 | None:intergenic | 55.0% | |
| CCCTAAAATGGGATGGGGTG+TGG | + | tig0010967:69083-69102 | Msa1349630:intron | 55.0% | |
| GATGCGTCTTGCTCAAAGCC+GGG | - | tig0010967:69388-69407 | None:intergenic | 55.0% | |
| CGATGCGTCTTGCTCAAAGC+CGG | - | tig0010967:69389-69408 | None:intergenic | 55.0% | |
| CAGAGAGTCAGAGGGGAATC+TGG | + | tig0010967:69751-69770 | Msa1349630:intron | 55.0% | |
| GCTGCAGTAGTCCTTGTGCT+TGG | + | tig0010967:69918-69937 | Msa1349630:intron | 55.0% | |
| CGGGCTGATTGTTTGAGAGC+AGG | - | tig0010967:70053-70072 | None:intergenic | 55.0% | |
| TGCTGAGCTCCCTTCCTATG+TGG | - | tig0010967:70244-70263 | None:intergenic | 55.0% | |
| GTTGTGTGGGGGAGATCTGT+TGG | - | tig0010967:70268-70287 | None:intergenic | 55.0% | |
| TCCCCCACACAACTATGTGG+AGG | + | tig0010967:70275-70294 | Msa1349630:CDS | 55.0% | |
| GCAAGACGCATCGTAGGCAG+AGG | + | tig0010967:69396-69415 | Msa1349630:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0010967 | gene | 63320 | 70389 | 63320 | ID=Msa1349630;Name=Msa1349630 |
| tig0010967 | mRNA | 63320 | 70389 | 63320 | ID=Msa1349630-mRNA-1;Parent=Msa1349630;Name=Msa1349630-mRNA-1;_AED=0.12;_eAED=0.12;_QI=37|0.4|0.16|0.66|1|1|6|0|583 |
| tig0010967 | exon | 63320 | 63676 | 63320 | ID=Msa1349630-mRNA-1:exon:7034;Parent=Msa1349630-mRNA-1 |
| tig0010967 | exon | 63801 | 64314 | 63801 | ID=Msa1349630-mRNA-1:exon:7035;Parent=Msa1349630-mRNA-1 |
| tig0010967 | exon | 66311 | 66457 | 66311 | ID=Msa1349630-mRNA-1:exon:7036;Parent=Msa1349630-mRNA-1 |
| tig0010967 | exon | 68005 | 68547 | 68005 | ID=Msa1349630-mRNA-1:exon:7037;Parent=Msa1349630-mRNA-1 |
| tig0010967 | exon | 68882 | 68968 | 68882 | ID=Msa1349630-mRNA-1:exon:7038;Parent=Msa1349630-mRNA-1 |
| tig0010967 | exon | 70249 | 70389 | 70249 | ID=Msa1349630-mRNA-1:exon:7039;Parent=Msa1349630-mRNA-1 |
| tig0010967 | five_prime_UTR | 63320 | 63356 | 63320 | ID=Msa1349630-mRNA-1:five_prime_utr;Parent=Msa1349630-mRNA-1 |
| tig0010967 | CDS | 63357 | 63676 | 63357 | ID=Msa1349630-mRNA-1:cds;Parent=Msa1349630-mRNA-1 |
| tig0010967 | CDS | 63801 | 64314 | 63801 | ID=Msa1349630-mRNA-1:cds;Parent=Msa1349630-mRNA-1 |
| tig0010967 | CDS | 66311 | 66457 | 66311 | ID=Msa1349630-mRNA-1:cds;Parent=Msa1349630-mRNA-1 |
| tig0010967 | CDS | 68005 | 68547 | 68005 | ID=Msa1349630-mRNA-1:cds;Parent=Msa1349630-mRNA-1 |
| tig0010967 | CDS | 68882 | 68968 | 68882 | ID=Msa1349630-mRNA-1:cds;Parent=Msa1349630-mRNA-1 |
| tig0010967 | CDS | 70249 | 70389 | 70249 | ID=Msa1349630-mRNA-1:cds;Parent=Msa1349630-mRNA-1 |
| Gene Sequence |
| Protein sequence |
