Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1356390 | KEH24711.1 | 94.435 | 611 | 32 | 1 | 1 | 611 | 1 | 609 | 0.0 | 1144 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1356390 | sp|Q9SZL6|MTEF6_ARATH | 30.351 | 313 | 180 | 6 | 285 | 593 | 46 | 324 | 8.43e-35 | 137 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1356390 | A0A072U5S3 | 94.435 | 611 | 32 | 1 | 1 | 611 | 1 | 609 | 0.0 | 1144 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1356390 | TR | mTERF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0045660 | Msa1356390 | 0.800241 | 1.580417e-48 | -8.615850e-47 |
| Msa0051600 | Msa1356390 | 0.802403 | 5.705264e-49 | -8.615850e-47 |
| Msa1356390 | Msa1371840 | 0.801612 | 8.295617e-49 | -8.615850e-47 |
| Msa1356390 | Msa1444500 | 0.801893 | 7.261060e-49 | -8.615850e-47 |
| Msa0607440 | Msa1356390 | 0.805008 | 1.642286e-49 | -8.615850e-47 |
| Msa0622690 | Msa1356390 | 0.810603 | 1.061907e-50 | -8.615850e-47 |
| Msa0685880 | Msa1356390 | 0.810058 | 1.392359e-50 | -8.615850e-47 |
| Msa0372250 | Msa1356390 | 0.806429 | 8.262640e-50 | -8.615850e-47 |
| Msa0868040 | Msa1356390 | 0.805269 | 1.448246e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1356390 | MtrunA17_Chr6g0448821 | 96.561 | 378 | 13 | 0 | 234 | 611 | 1 | 378 | 0.0 | 744 |
| Msa1356390 | MtrunA17_Chr6g0448831 | 89.444 | 180 | 17 | 1 | 1 | 180 | 4 | 181 | 5.58e-99 | 299 |
| Msa1356390 | MtrunA17_Chr4g0043941 | 27.331 | 311 | 190 | 4 | 285 | 593 | 46 | 322 | 9.65e-36 | 137 |
| Msa1356390 | MtrunA17_Chr4g0034981 | 28.972 | 321 | 224 | 4 | 272 | 589 | 266 | 585 | 5.01e-34 | 137 |
| Msa1356390 | MtrunA17_Chr2g0294671 | 30.859 | 256 | 172 | 3 | 335 | 589 | 231 | 482 | 2.52e-31 | 127 |
| Msa1356390 | MtrunA17_Chr5g0417641 | 28.807 | 243 | 166 | 4 | 351 | 591 | 57 | 294 | 1.01e-25 | 107 |
| Msa1356390 | MtrunA17_Chr1g0212691 | 26.269 | 335 | 241 | 6 | 265 | 595 | 124 | 456 | 1.05e-24 | 108 |
| Msa1356390 | MtrunA17_Chr5g0428941 | 23.698 | 384 | 241 | 7 | 210 | 589 | 147 | 482 | 4.87e-24 | 106 |
| Msa1356390 | MtrunA17_Chr5g0428941 | 26.009 | 223 | 156 | 5 | 352 | 569 | 140 | 358 | 8.66e-14 | 74.3 |
| Msa1356390 | MtrunA17_Chr2g0311181 | 28.934 | 197 | 133 | 2 | 372 | 567 | 87 | 277 | 1.05e-21 | 96.7 |
| Msa1356390 | MtrunA17_Chr5g0445491 | 26.911 | 327 | 184 | 6 | 283 | 596 | 194 | 478 | 4.33e-20 | 94.0 |
| Msa1356390 | MtrunA17_Chr2g0304101 | 25.439 | 228 | 158 | 3 | 368 | 589 | 83 | 304 | 1.84e-18 | 86.7 |
| Msa1356390 | MtrunA17_Chr7g0250261 | 30.000 | 160 | 107 | 4 | 436 | 593 | 127 | 283 | 3.05e-16 | 79.7 |
| Msa1356390 | MtrunA17_Chr0c29g0494001 | 30.000 | 160 | 107 | 4 | 436 | 593 | 127 | 283 | 3.05e-16 | 79.7 |
| Msa1356390 | MtrunA17_Chr8g0391881 | 22.256 | 328 | 199 | 8 | 283 | 566 | 59 | 374 | 2.14e-13 | 72.0 |
| Msa1356390 | MtrunA17_Chr3g0094341 | 24.176 | 182 | 118 | 4 | 394 | 562 | 27 | 201 | 1.48e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1356390 | AT1G78930.1 | 50.958 | 522 | 247 | 5 | 80 | 599 | 70 | 584 | 0.0 | 525 |
| Msa1356390 | AT4G38160.2 | 29.503 | 322 | 188 | 7 | 285 | 602 | 46 | 332 | 5.95e-36 | 139 |
| Msa1356390 | AT4G38160.4 | 30.351 | 313 | 180 | 6 | 285 | 593 | 46 | 324 | 8.57e-36 | 137 |
| Msa1356390 | AT4G38160.1 | 30.351 | 313 | 180 | 6 | 285 | 593 | 46 | 324 | 8.57e-36 | 137 |
| Msa1356390 | AT4G38160.3 | 30.124 | 322 | 186 | 7 | 285 | 602 | 46 | 332 | 1.80e-35 | 138 |
| Msa1356390 | AT2G21710.1 | 27.389 | 314 | 224 | 4 | 279 | 589 | 280 | 592 | 4.72e-31 | 129 |
| Msa1356390 | AT4G14605.2 | 28.358 | 268 | 180 | 5 | 323 | 589 | 211 | 467 | 2.96e-30 | 125 |
| Msa1356390 | AT4G14605.1 | 28.358 | 268 | 180 | 5 | 323 | 589 | 211 | 467 | 2.96e-30 | 125 |
| Msa1356390 | AT2G03050.1 | 31.687 | 243 | 156 | 6 | 351 | 589 | 32 | 268 | 2.51e-28 | 115 |
| Msa1356390 | AT2G03050.2 | 31.687 | 243 | 156 | 6 | 351 | 589 | 33 | 269 | 2.72e-28 | 115 |
| Msa1356390 | AT2G36000.2 | 30.942 | 223 | 143 | 5 | 372 | 589 | 91 | 307 | 1.62e-23 | 102 |
| Msa1356390 | AT2G36000.1 | 30.942 | 223 | 143 | 5 | 372 | 589 | 91 | 307 | 2.40e-23 | 102 |
| Msa1356390 | AT4G02990.2 | 23.837 | 344 | 220 | 8 | 284 | 589 | 151 | 490 | 1.58e-22 | 102 |
| Msa1356390 | AT4G02990.1 | 23.837 | 344 | 220 | 8 | 284 | 589 | 151 | 490 | 1.58e-22 | 102 |
| Msa1356390 | AT5G55580.2 | 26.877 | 253 | 176 | 5 | 352 | 596 | 114 | 365 | 2.03e-21 | 97.1 |
| Msa1356390 | AT2G21710.2 | 25.180 | 278 | 204 | 4 | 279 | 553 | 280 | 556 | 2.40e-21 | 98.6 |
| Msa1356390 | AT2G21710.2 | 22.368 | 228 | 166 | 3 | 348 | 567 | 278 | 502 | 7.43e-13 | 72.0 |
| Msa1356390 | AT2G44020.1 | 24.776 | 335 | 246 | 6 | 265 | 595 | 129 | 461 | 5.96e-21 | 97.1 |
| Msa1356390 | AT5G55580.1 | 26.877 | 253 | 176 | 5 | 352 | 596 | 220 | 471 | 1.10e-20 | 96.3 |
| Msa1356390 | AT2G21710.3 | 24.910 | 277 | 204 | 4 | 279 | 552 | 280 | 555 | 1.19e-20 | 96.3 |
| Msa1356390 | AT2G21710.3 | 22.368 | 228 | 166 | 3 | 348 | 567 | 278 | 502 | 4.81e-13 | 72.4 |
| Msa1356390 | AT2G34620.1 | 26.339 | 224 | 161 | 3 | 368 | 589 | 69 | 290 | 1.87e-19 | 89.7 |
| Msa1356390 | AT1G61970.2 | 27.508 | 309 | 212 | 9 | 266 | 571 | 70 | 369 | 2.42e-18 | 88.2 |
| Msa1356390 | AT1G61970.7 | 27.508 | 309 | 212 | 9 | 266 | 571 | 70 | 369 | 2.42e-18 | 88.2 |
| Msa1356390 | AT1G61970.6 | 27.508 | 309 | 212 | 9 | 266 | 571 | 70 | 369 | 2.42e-18 | 88.2 |
| Msa1356390 | AT1G61970.3 | 27.508 | 309 | 212 | 9 | 266 | 571 | 70 | 369 | 2.42e-18 | 88.2 |
| Msa1356390 | AT1G61970.5 | 27.508 | 309 | 212 | 9 | 266 | 571 | 70 | 369 | 2.42e-18 | 88.2 |
| Msa1356390 | AT1G61970.4 | 27.508 | 309 | 212 | 9 | 266 | 571 | 70 | 369 | 2.42e-18 | 88.2 |
| Msa1356390 | AT1G61970.1 | 27.508 | 309 | 212 | 9 | 266 | 571 | 70 | 369 | 2.42e-18 | 88.2 |
| Msa1356390 | AT3G18870.1 | 27.607 | 163 | 115 | 2 | 431 | 593 | 113 | 272 | 3.45e-17 | 82.8 |
| Msa1356390 | AT1G62110.1 | 25.484 | 310 | 220 | 8 | 265 | 571 | 105 | 406 | 1.80e-15 | 79.7 |
| Msa1356390 | AT1G61980.3 | 25.559 | 313 | 213 | 10 | 266 | 571 | 70 | 369 | 2.99e-15 | 78.6 |
| Msa1356390 | AT1G61980.2 | 25.559 | 313 | 213 | 10 | 266 | 571 | 70 | 369 | 2.99e-15 | 78.6 |
| Msa1356390 | AT1G61980.1 | 25.559 | 313 | 213 | 10 | 266 | 571 | 70 | 369 | 2.99e-15 | 78.6 |
| Msa1356390 | AT1G62120.1 | 25.170 | 294 | 206 | 8 | 282 | 570 | 90 | 374 | 4.08e-15 | 78.6 |
| Msa1356390 | AT1G61990.2 | 24.138 | 406 | 270 | 12 | 212 | 602 | 2 | 384 | 6.31e-15 | 77.8 |
| Msa1356390 | AT1G61990.1 | 24.138 | 406 | 270 | 12 | 212 | 602 | 2 | 384 | 6.31e-15 | 77.8 |
| Msa1356390 | AT1G62010.1 | 32.386 | 176 | 114 | 4 | 395 | 570 | 182 | 352 | 2.24e-14 | 75.9 |
| Msa1356390 | AT1G62085.1 | 29.310 | 174 | 109 | 5 | 429 | 602 | 270 | 429 | 1.06e-13 | 74.3 |
| Msa1356390 | AT1G62085.2 | 29.310 | 174 | 109 | 5 | 429 | 602 | 270 | 429 | 1.06e-13 | 74.3 |
| Msa1356390 | AT1G61960.1 | 22.596 | 416 | 250 | 16 | 210 | 570 | 6 | 404 | 1.78e-13 | 73.6 |
| Msa1356390 | AT3G46950.1 | 24.868 | 378 | 248 | 13 | 205 | 571 | 48 | 400 | 4.81e-12 | 68.9 |
| Msa1356390 | AT5G55580.3 | 27.333 | 150 | 106 | 3 | 390 | 536 | 223 | 372 | 6.47e-12 | 68.2 |
| Msa1356390 | AT5G23930.1 | 32.479 | 117 | 77 | 2 | 455 | 571 | 288 | 402 | 3.34e-11 | 66.2 |
Find 146 sgRNAs with CRISPR-Local
Find 601 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAGAAGGAAATTGCATTTA+TGG | 0.115303 | tig0015628:-13960 | Msa1356390:CDS |
| TGTTATGTTCTTTGAAAATA+TGG | 0.137547 | tig0015628:-14475 | Msa1356390:CDS |
| TTCACAAAGTATTCTCAATT+TGG | 0.141339 | tig0015628:-21495 | Msa1356390:CDS |
| GATGCCAAAATTAGAATTTC+TGG | 0.144550 | tig0015628:-13891 | Msa1356390:CDS |
| TTCACCAGAAATTCTAATTT+TGG | 0.159132 | tig0015628:+13887 | None:intergenic |
| CTGCGGGGATCCCAATATTT+TGG | 0.192705 | tig0015628:+20740 | None:intergenic |
| AGAATTTGCTGCTGAATTTA+TGG | 0.206246 | tig0015628:-13717 | Msa1356390:CDS |
| TACTACAACTGAAAATTAAA+AGG | 0.236426 | tig0015628:+13566 | None:intergenic |
| CTGGATATTCTCCAAAATAT+TGG | 0.247372 | tig0015628:-20751 | Msa1356390:CDS |
| TAGTGTGAGCGGGAGGAAAA+AGG | 0.267324 | tig0015628:+20998 | None:intergenic |
| GGTAGAAAGTGTTAGGGATT+TGG | 0.286024 | tig0015628:-21259 | Msa1356390:CDS |
| GCACGGTCTGTCCATGTCTT+TGG | 0.290233 | tig0015628:+18550 | None:intergenic |
| CAAAAGACAACCTCAACTAT+TGG | 0.292015 | tig0015628:-18524 | Msa1356390:CDS |
| TACCTTCACGGAATATAAAA+AGG | 0.292325 | tig0015628:+19681 | None:intergenic |
| TCAACATTCCAGAGCAAAAT+AGG | 0.293006 | tig0015628:+20685 | None:intergenic |
| AGACGTTCATATTGTCGTTC+TGG | 0.296095 | tig0015628:-21420 | Msa1356390:CDS |
| TGTAAATATCATTACCTTGT+AGG | 0.319913 | tig0015628:-13646 | Msa1356390:exon |
| TGCGTTTCCACATAAGATTC+AGG | 0.320950 | tig0015628:-21553 | Msa1356390:CDS |
| ATGACAAAGCATGCTTGATT+TGG | 0.326385 | tig0015628:-13522 | Msa1356390:three_prime_UTR |
| AGAAGATAAAACCAAGATAT+CGG | 0.329241 | tig0015628:-13799 | Msa1356390:CDS |
| GAATATCGAATGTAGCTTAA+AGG | 0.330400 | tig0015628:-13762 | Msa1356390:CDS |
| ACATGTTGGTAGAAAGTGTT+AGG | 0.342505 | tig0015628:-21266 | Msa1356390:CDS |
| TCACAAAGTATTCTCAATTT+GGG | 0.343251 | tig0015628:-21494 | Msa1356390:CDS |
| ATTGAGTTCCTTAGGAGAAT+TGG | 0.350307 | tig0015628:-14366 | Msa1356390:CDS |
| ATGTCAGACACAAGTAGTTC+TGG | 0.365444 | tig0015628:+14303 | None:intergenic |
| AGAGCAAGATTGAGTTCCTT+AGG | 0.365560 | tig0015628:-14374 | Msa1356390:CDS |
| TAATCACATCTCATCTATAC+TGG | 0.369786 | tig0015628:-20770 | Msa1356390:CDS |
| TTCTAAAGCTTACATTCCTT+TGG | 0.370275 | tig0015628:-14340 | Msa1356390:CDS |
| AATTCATATTATCAATTCAA+TGG | 0.378802 | tig0015628:+21634 | None:intergenic |
| TGGATATTCTCCAAAATATT+GGG | 0.384384 | tig0015628:-20750 | Msa1356390:CDS |
| TCGCATCCCCAACATAATAT+TGG | 0.384825 | tig0015628:-20716 | Msa1356390:CDS |
| GGAAAAGCCAATATTATGTT+GGG | 0.385050 | tig0015628:+20709 | None:intergenic |
| AAATACCTGTAGAAAGTCTT+CGG | 0.386329 | tig0015628:+18387 | None:intergenic |
| CATATTGTCGTTCTGGGATG+AGG | 0.397363 | tig0015628:-21413 | Msa1356390:CDS |
| AGTTACCCGCCTCATCCATT+TGG | 0.398642 | tig0015628:-21823 | Msa1356390:five_prime_UTR |
| AAGCATTCAAGAGAACTATA+AGG | 0.404306 | tig0015628:-19713 | Msa1356390:CDS |
| GAATTTGCTGCTGAATTTAT+GGG | 0.409909 | tig0015628:-13716 | Msa1356390:CDS |
| GACGTTCATATTGTCGTTCT+GGG | 0.411201 | tig0015628:-21419 | Msa1356390:CDS |
| AATACCTGTAGAAAGTCTTC+GGG | 0.414049 | tig0015628:+18388 | None:intergenic |
| CCTTTCAGAACCCGATATCT+TGG | 0.415637 | tig0015628:+13788 | None:intergenic |
| TCACTTCTCTTCTTCCATGC+TGG | 0.415823 | tig0015628:-21235 | Msa1356390:CDS |
| AAAAGACAACCTCAACTATT+GGG | 0.416730 | tig0015628:-18523 | Msa1356390:CDS |
| TTGAGAATACTTTGTGAAAG+TGG | 0.428065 | tig0015628:+21500 | None:intergenic |
| AACTAGCAAGCTGAAGTTGA+TGG | 0.435075 | tig0015628:-18494 | Msa1356390:CDS |
| AGAAAGCAATTGGTGTGAAT+TGG | 0.437050 | tig0015628:+21591 | None:intergenic |
| TCTACTTGGGTACAGCATAA+AGG | 0.438005 | tig0015628:-13921 | Msa1356390:CDS |
| ACTCCTTCAAACTAGAGTTC+TGG | 0.442934 | tig0015628:-20662 | Msa1356390:CDS |
| GTTATGTTCTTTGAAAATAT+GGG | 0.445605 | tig0015628:-14474 | Msa1356390:CDS |
| TTTCCTCTGAACTCCTAGTT+CGG | 0.462041 | tig0015628:+18459 | None:intergenic |
| GGGACACAGTAGTCTCTGAT+TGG | 0.463347 | tig0015628:-21392 | Msa1356390:CDS |
| AGGCCAGAACTCTAGTTTGA+AGG | 0.466029 | tig0015628:+20659 | None:intergenic |
| TGCTATTGATTCGGATTCCT+CGG | 0.469322 | tig0015628:+21311 | None:intergenic |
| TCAACTTGAACTTCAACTAC+AGG | 0.473500 | tig0015628:-21185 | Msa1356390:CDS |
| GCTGCTGAATTTATGGGTGT+TGG | 0.474476 | tig0015628:-13710 | Msa1356390:CDS |
| GACAAGTGGAAGAAAGCAAT+TGG | 0.476718 | tig0015628:+21581 | None:intergenic |
| AATTTGGCGTACCTGGTTCA+AGG | 0.477280 | tig0015628:+20639 | None:intergenic |
| TGAGTTTGATGCTATTGATT+CGG | 0.480221 | tig0015628:+21302 | None:intergenic |
| GAAGATAAAACCAAGATATC+GGG | 0.481026 | tig0015628:-13798 | Msa1356390:CDS |
| ATGTGTAGACGAACTCCAAA+TGG | 0.481783 | tig0015628:+21808 | None:intergenic |
| AGGAAAAGCCAATATTATGT+TGG | 0.485798 | tig0015628:+20708 | None:intergenic |
| AGTCTCTGATTGGGAACTGC+AGG | 0.486091 | tig0015628:-21382 | Msa1356390:CDS |
| ATGTTGGGGATGCGATCTGC+GGG | 0.490612 | tig0015628:+20724 | None:intergenic |
| TGAGAATACTTTGTGAAAGT+GGG | 0.493211 | tig0015628:+21501 | None:intergenic |
| GAAATGATTCAATGAAGAAA+CGG | 0.495067 | tig0015628:+20818 | None:intergenic |
| CATTCTAGGTTCCAAAGACA+TGG | 0.510075 | tig0015628:-18561 | Msa1356390:intron |
| CGAACATCCTGAATCTTATG+TGG | 0.510176 | tig0015628:+21546 | None:intergenic |
| ACACTACAATCATACCTTCA+CGG | 0.512801 | tig0015628:+19669 | None:intergenic |
| CATCTAGTGAAATTGATAAG+TGG | 0.514953 | tig0015628:+20929 | None:intergenic |
| ATCTAGTGAAATTGATAAGT+GGG | 0.520056 | tig0015628:+20930 | None:intergenic |
| AGTGAATAGCTAAAATACCT+AGG | 0.521625 | tig0015628:+13827 | None:intergenic |
| CAGCTTATCATGTGAAGACA+AGG | 0.524806 | tig0015628:+13667 | None:intergenic |
| TAGAAACACCAATTCTCCTA+AGG | 0.525753 | tig0015628:+14358 | None:intergenic |
| CTAGCTTACTTAGAGAGTCT+CGG | 0.531011 | tig0015628:-21117 | Msa1356390:CDS |
| ACAAATGGGTGTGTCGGCCG+AGG | 0.532280 | tig0015628:-21328 | Msa1356390:CDS |
| GGACACAGTAGTCTCTGATT+GGG | 0.532317 | tig0015628:-21391 | Msa1356390:CDS |
| CTTCCTCAATGAATGTCGCC+AGG | 0.535977 | tig0015628:-21083 | Msa1356390:CDS |
| GTAGATCAGTTTGCCGAACT+AGG | 0.537040 | tig0015628:-18472 | Msa1356390:CDS |
| TCTTCAACAAATGGGTGTGT+CGG | 0.540277 | tig0015628:-21334 | Msa1356390:CDS |
| GAGCAACATGTGAGAGAGGC+GGG | 0.540609 | tig0015628:+21848 | None:intergenic |
| ACCAACATGTTGAGATATGC+TGG | 0.540717 | tig0015628:+21279 | None:intergenic |
| ATAACAATACCGTTGAGGTA+AGG | 0.541814 | tig0015628:+14272 | None:intergenic |
| TGAGGCGAATATTCTTGATA+AGG | 0.543511 | tig0015628:+20959 | None:intergenic |
| GATGCTAATGCTAATGATGT+TGG | 0.543989 | tig0015628:-21213 | Msa1356390:CDS |
| TAACTTTGTTAATGAGAGAC+GGG | 0.545763 | tig0015628:+21037 | None:intergenic |
| ATGTAGCTTAAAGGATATGC+TGG | 0.546025 | tig0015628:-13753 | Msa1356390:CDS |
| TAGAGTTCTGGCCTTGAACC+AGG | 0.547091 | tig0015628:-20650 | Msa1356390:intron |
| GTAACTTTGTTAATGAGAGA+CGG | 0.550712 | tig0015628:+21036 | None:intergenic |
| CTTCACATTGCAGCTCTCAA+AGG | 0.551295 | tig0015628:-21153 | Msa1356390:CDS |
| ATAGTGTACTTTATGAAGCT+AGG | 0.563671 | tig0015628:-13989 | Msa1356390:CDS |
| TGATGAGTAGTGTGAGCGGG+AGG | 0.570194 | tig0015628:+20991 | None:intergenic |
| TAGTGATGAGTAGTGTGAGC+GGG | 0.571600 | tig0015628:+20988 | None:intergenic |
| GATATCGGGTTCTGAAAGGA+AGG | 0.571698 | tig0015628:-13784 | Msa1356390:CDS |
| CCAAGATATCGGGTTCTGAA+AGG | 0.573170 | tig0015628:-13788 | Msa1356390:CDS |
| GTGAATAGCTAAAATACCTA+GGG | 0.575252 | tig0015628:+13828 | None:intergenic |
| CATGTTGGTAGAAAGTGTTA+GGG | 0.576782 | tig0015628:-21265 | Msa1356390:CDS |
| GGATACTTTCTGATAACCAA+AGG | 0.580282 | tig0015628:+14324 | None:intergenic |
| ATATTGTCGTTCTGGGATGA+GGG | 0.584409 | tig0015628:-21412 | Msa1356390:CDS |
| CAACTTGAACTTCAACTACA+GGG | 0.584755 | tig0015628:-21184 | Msa1356390:CDS |
| GAAGAGGCCGGTACGAGATG+TGG | 0.585805 | tig0015628:-13858 | Msa1356390:CDS |
| GTTGAACAACCCAATAGTTG+AGG | 0.591010 | tig0015628:+18514 | None:intergenic |
| TTCTGGTGAACTCAATGAAG+AGG | 0.597466 | tig0015628:-13874 | Msa1356390:CDS |
| TTAACAAAACCTTACCTCAA+CGG | 0.600806 | tig0015628:-14281 | Msa1356390:intron |
| AGACGGGAGGGTGTCAGCGG+AGG | 0.601376 | tig0015628:+21053 | None:intergenic |
| CGAACTCCAAATGGATGAGG+CGG | 0.602071 | tig0015628:+21817 | None:intergenic |
| GAAGCCCGAAGACTTTCTAC+AGG | 0.604401 | tig0015628:-18392 | Msa1356390:intron |
| GGTGAACTCAATGAAGAGGC+CGG | 0.608350 | tig0015628:-13870 | Msa1356390:CDS |
| TTGATAAGTGGGTCATGATG+AGG | 0.611276 | tig0015628:+20941 | None:intergenic |
| GAACTCCAAATGGATGAGGC+GGG | 0.612242 | tig0015628:+21818 | None:intergenic |
| GAAGCTAGGACTTTCAGAGA+AGG | 0.613527 | tig0015628:-13975 | Msa1356390:CDS |
| AGACGAACTCCAAATGGATG+AGG | 0.614003 | tig0015628:+21814 | None:intergenic |
| TATGTTGGGGATGCGATCTG+CGG | 0.616027 | tig0015628:+20723 | None:intergenic |
| TGTTGATGCTAAAATATCCG+TGG | 0.618761 | tig0015628:-19747 | Msa1356390:CDS |
| TTTGTTAATGAGAGACGGGA+GGG | 0.619589 | tig0015628:+21041 | None:intergenic |
| GAGAGACGGGAGGGTGTCAG+CGG | 0.621038 | tig0015628:+21050 | None:intergenic |
| GAAAAGGTTCAAGCAAGGCG+TGG | 0.622427 | tig0015628:-20877 | Msa1356390:CDS |
| TGATAAGATGAATTCCTACA+AGG | 0.624865 | tig0015628:+13632 | None:intergenic |
| TTGCCGAACTAGGAGTTCAG+AGG | 0.629209 | tig0015628:-18462 | Msa1356390:CDS |
| GAGATGTGGTGAGCTACCCT+AGG | 0.629824 | tig0015628:-13844 | Msa1356390:CDS |
| GAGAATACTTTGTGAAAGTG+GGG | 0.630001 | tig0015628:+21502 | None:intergenic |
| GAAAAGCCAATATTATGTTG+GGG | 0.630240 | tig0015628:+20710 | None:intergenic |
| GTTGATGCTAAAATATCCGT+GGG | 0.632158 | tig0015628:-19746 | Msa1356390:CDS |
| ACCAGCATATCTCAACATGT+TGG | 0.632521 | tig0015628:-21280 | Msa1356390:CDS |
| GTCAGCGGAGGATATATACC+TGG | 0.634286 | tig0015628:+21065 | None:intergenic |
| ATTAGCATTAGCATCCAGCA+TGG | 0.634999 | tig0015628:+21221 | None:intergenic |
| CTTAGAGCAACATGTGAGAG+AGG | 0.638024 | tig0015628:+21844 | None:intergenic |
| TCTGATTGGGAACTGCAGGA+AGG | 0.638520 | tig0015628:-21378 | Msa1356390:CDS |
| GAATCATAACAATACCGTTG+AGG | 0.640993 | tig0015628:+14267 | None:intergenic |
| GGCTTCTGTAATAATAGCTG+AGG | 0.649008 | tig0015628:+18409 | None:intergenic |
| AGAGCAACATGTGAGAGAGG+CGG | 0.649017 | tig0015628:+21847 | None:intergenic |
| ATACCTGGCGACATTCATTG+AGG | 0.650039 | tig0015628:+21080 | None:intergenic |
| TAGCTCACCACATCTCGTAC+CGG | 0.650571 | tig0015628:+13851 | None:intergenic |
| TTTATGCTGTACCCAAGTAG+AGG | 0.651825 | tig0015628:+13923 | None:intergenic |
| ACATTCCAGAGCAAAATAGG+AGG | 0.652429 | tig0015628:+20688 | None:intergenic |
| CTTTGTTAATGAGAGACGGG+AGG | 0.652659 | tig0015628:+21040 | None:intergenic |
| GCAGCTCTCAAAGGTGACAA+CGG | 0.668388 | tig0015628:-21144 | Msa1356390:CDS |
| AAGGTTCAAGCAAGGCGTGG+AGG | 0.673259 | tig0015628:-20874 | Msa1356390:CDS |
| AAGCAGCATCTTGAGAAGCG+AGG | 0.673782 | tig0015628:+20842 | None:intergenic |
| GGAAACGCAGCATAGACAAG+TGG | 0.684763 | tig0015628:+21567 | None:intergenic |
| ATAGTGATGAGTAGTGTGAG+CGG | 0.686698 | tig0015628:+20987 | None:intergenic |
| CATTCAAGAGAACTATAAGG+AGG | 0.687484 | tig0015628:-19710 | Msa1356390:CDS |
| AGCTTATCATGTGAAGACAA+GGG | 0.692707 | tig0015628:+13668 | None:intergenic |
| ACTTGGGTACAGCATAAAGG+AGG | 0.694799 | tig0015628:-13918 | Msa1356390:CDS |
| ATGCTTGTAGATAGAACCCA+CGG | 0.695925 | tig0015628:+19730 | None:intergenic |
| TGTTGGGGATGCGATCTGCG+GGG | 0.717165 | tig0015628:+20725 | None:intergenic |
| AGTGATAACAAAAGTATACG+AGG | 0.730910 | tig0015628:+20796 | None:intergenic |
| TTATCATGTGAAGACAAGGG+AGG | 0.739674 | tig0015628:+13671 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATATTAAAATATTAATT+GGG | - | tig0015628:16045-16064 | Msa1356390:intron | 0.0% |
| !! | ATTATTAACTTATTAGTTAA+AGG | + | tig0015628:15547-15566 | None:intergenic | 10.0% |
| !!! | TTAAAGAAAAATGTTTTATT+AGG | - | tig0015628:16129-16148 | Msa1356390:intron | 10.0% |
| !!! | TTTGAAAAATAAAATGTTTT+TGG | - | tig0015628:16672-16691 | Msa1356390:intron | 10.0% |
| !! | GTATATTATTAAGATTATTA+TGG | - | tig0015628:19730-19749 | Msa1356390:CDS | 10.0% |
| !!! | TTAAATTAAATGATGTTTTA+AGG | - | tig0015628:19895-19914 | Msa1356390:intron | 10.0% |
| !!! | ATTTGTTTATTGAAATTTTA+AGG | + | tig0015628:20625-20644 | None:intergenic | 10.0% |
| !! | AATTCATATTATCAATTCAA+TGG | + | tig0015628:13724-13743 | None:intergenic | 15.0% |
| !! | TATTATAATTAAGATCATGT+TGG | + | tig0015628:15514-15533 | None:intergenic | 15.0% |
| !! | AATAAATTGGATTCTTAATA+AGG | + | tig0015628:16630-16649 | None:intergenic | 15.0% |
| !! | TAATAATATTGTTTCATTCT+AGG | - | tig0015628:16780-16799 | Msa1356390:intron | 15.0% |
| !! | ATATAAAGTAGAGAAAAATT+TGG | - | tig0015628:17085-17104 | Msa1356390:intron | 15.0% |
| !! | TTTATTAGAATTACATTGTA+AGG | - | tig0015628:20502-20521 | Msa1356390:intron | 15.0% |
| !!! | TATTTTTAAATAACTGCAAA+TGG | - | tig0015628:20781-20800 | Msa1356390:CDS | 15.0% |
| !!! | ATTTTTAAATAACTGCAAAT+GGG | - | tig0015628:20782-20801 | Msa1356390:CDS | 15.0% |
| !!! | GTTTTGATAAAGAAAATATT+GGG | - | tig0015628:20903-20922 | Msa1356390:CDS | 15.0% |
| !! | AATCTTTAGATCTTTCTTAA+TGG | + | tig0015628:15127-15146 | None:intergenic | 20.0% |
| !!! | ATTGATTTTTTGTAGATTGA+CGG | - | tig0015628:15565-15584 | Msa1356390:intron | 20.0% |
| !! | TTGTTACTAAAAGAAAACTA+TGG | - | tig0015628:15769-15788 | Msa1356390:intron | 20.0% |
| !! | ATTACATTTAACATACACAT+AGG | + | tig0015628:16009-16028 | None:intergenic | 20.0% |
| !! | ACCAAATAGTAGAATAATTT+GGG | + | tig0015628:16402-16421 | None:intergenic | 20.0% |
| !! | AACCAAATAGTAGAATAATT+TGG | + | tig0015628:16403-16422 | None:intergenic | 20.0% |
| !!! | TAAAATGTTTTTGGTATATG+TGG | - | tig0015628:16681-16700 | Msa1356390:intron | 20.0% |
| !! | AAAGACATATTTCATTAGTT+TGG | - | tig0015628:16727-16746 | Msa1356390:intron | 20.0% |
| !!! | AATTGTTATTGACAAAATTC+TGG | + | tig0015628:17229-17248 | None:intergenic | 20.0% |
| !! | ATTGAAGACAATTATAGAAA+TGG | - | tig0015628:17781-17800 | Msa1356390:intron | 20.0% |
| !! | TTGAAGACAATTATAGAAAT+GGG | - | tig0015628:17782-17801 | Msa1356390:intron | 20.0% |
| !!! | AACAATTTTGATAACCAAAA+GGG | + | tig0015628:17852-17871 | None:intergenic | 20.0% |
| !! | TGAAACATAGTTAAATAGTA+AGG | - | tig0015628:18397-18416 | Msa1356390:CDS | 20.0% |
| !! | GAAACATAGTTAAATAGTAA+GGG | - | tig0015628:18398-18417 | Msa1356390:CDS | 20.0% |
| !! | TGAAACATAGTTAAATAGTA+AGG | - | tig0015628:18397-18416 | Msa1356390:CDS | 20.0% |
| !! | GAAACATAGTTAAATAGTAA+GGG | - | tig0015628:18398-18417 | Msa1356390:CDS | 20.0% |
| !!! | AATACATTTATTTTTTCCTG+AGG | - | tig0015628:19790-19809 | Msa1356390:intron | 20.0% |
| !! | ATGTTTAATACACAAATTGA+CGG | + | tig0015628:20286-20305 | None:intergenic | 20.0% |
| !!! | TGTGTATTAAACATTCATTT+TGG | - | tig0015628:20292-20311 | Msa1356390:intron | 20.0% |
| !!! | TAAAATTACATTTTCTTTCG+AGG | + | tig0015628:20319-20338 | None:intergenic | 20.0% |
| !!! | AAAAAATATAAGTCTGGAAT+CGG | - | tig0015628:20733-20752 | Msa1356390:CDS | 20.0% |
| !!! | TGTTATGTTCTTTGAAAATA+TGG | - | tig0015628:20880-20899 | Msa1356390:CDS | 20.0% |
| !!! | GTTATGTTCTTTGAAAATAT+GGG | - | tig0015628:20881-20900 | Msa1356390:CDS | 20.0% |
| !!! | GGTTTTGATAAAGAAAATAT+TGG | - | tig0015628:20902-20921 | Msa1356390:CDS | 20.0% |
| !!! | CTTTCTTTTTAAAAGTTACA+GGG | + | tig0015628:21765-21784 | None:intergenic | 20.0% |
| !! | TACTACAACTGAAAATTAAA+AGG | + | tig0015628:21792-21811 | None:intergenic | 20.0% |
| ! | CTTTGTCTTTGTATAAGATA+TGG | - | tig0015628:13668-13687 | Msa1356390:CDS | 25.0% |
| !! | TTCACAAAGTATTCTCAATT+TGG | - | tig0015628:13860-13879 | Msa1356390:CDS | 25.0% |
| !! | TCACAAAGTATTCTCAATTT+GGG | - | tig0015628:13861-13880 | Msa1356390:CDS | 25.0% |
| !! | TTCAACTTTTCTTCAACAAA+TGG | - | tig0015628:14012-14031 | Msa1356390:intron | 25.0% |
| !! | TCAACTTTTCTTCAACAAAT+GGG | - | tig0015628:14013-14032 | Msa1356390:intron | 25.0% |
| ! | ATCTAGTGAAATTGATAAGT+GGG | + | tig0015628:14428-14447 | None:intergenic | 25.0% |
| ! | GAAATGATTCAATGAAGAAA+CGG | + | tig0015628:14540-14559 | None:intergenic | 25.0% |
| ! | TGGATATTCTCCAAAATATT+GGG | - | tig0015628:14605-14624 | Msa1356390:intron | 25.0% |
| ! | TTCGGAAAGAAAGAAAAATT+TGG | + | tig0015628:14735-14754 | None:intergenic | 25.0% |
| ! | TAGATGACATAAGATTAGAA+AGG | - | tig0015628:14904-14923 | Msa1356390:intron | 25.0% |
| !! | GTTTCTCTTATAGTTTTTCT+AGG | + | tig0015628:15105-15124 | None:intergenic | 25.0% |
| ! | AGATCTAAAGATTAATGAGT+TGG | - | tig0015628:15134-15153 | Msa1356390:intron | 25.0% |
| !! | TAATGAGTTGGATTGAAATA+TGG | - | tig0015628:15146-15165 | Msa1356390:intron | 25.0% |
| !! | TGGTTTTTGATAGAACATTA+TGG | - | tig0015628:15166-15185 | Msa1356390:intron | 25.0% |
| ! | CACATAAACGCAAAATTATA+TGG | + | tig0015628:15727-15746 | None:intergenic | 25.0% |
| ! | GTTTATGTGTATCTGTATTT+AGG | - | tig0015628:15738-15757 | Msa1356390:intron | 25.0% |
| ! | ACTGTAGAATATATTTCCTA+GGG | + | tig0015628:15831-15850 | None:intergenic | 25.0% |
| ! | TACTGTAGAATATATTTCCT+AGG | + | tig0015628:15832-15851 | None:intergenic | 25.0% |
| !! | TTCAAGTTATCTTGTACATA+GGG | + | tig0015628:15865-15884 | None:intergenic | 25.0% |
| !!! | TTTCAAGTTATCTTGTACAT+AGG | + | tig0015628:15866-15885 | None:intergenic | 25.0% |
| ! | ATACACATAGGTATATCTTA+TGG | + | tig0015628:15997-16016 | None:intergenic | 25.0% |
| !!! | TGTTTTATTAGGCTAGATTT+CGG | - | tig0015628:16140-16159 | Msa1356390:intron | 25.0% |
| ! | TGCAAATATAGGATAGTTAT+TGG | + | tig0015628:16202-16221 | None:intergenic | 25.0% |
| !! | ATAGTAGAATAATTTGGGAT+AGG | + | tig0015628:16397-16416 | None:intergenic | 25.0% |
| ! | TCCCAAATTATTCTACTATT+TGG | - | tig0015628:16398-16417 | Msa1356390:intron | 25.0% |
| ! | TGATTCACAATAGAACATTA+TGG | + | tig0015628:16491-16510 | None:intergenic | 25.0% |
| ! | CATATGCATGTGAAATAAAT+TGG | + | tig0015628:16643-16662 | None:intergenic | 25.0% |
| ! | ATTTATTACAATTTGAGCAG+AGG | - | tig0015628:17044-17063 | Msa1356390:intron | 25.0% |
| ! | AATTTGACATGTGACTAATA+TGG | - | tig0015628:17245-17264 | Msa1356390:intron | 25.0% |
| !!! | ACAATTTTGATAACCAAAAG+GGG | + | tig0015628:17851-17870 | None:intergenic | 25.0% |
| !!! | CAACAATTTTGATAACCAAA+AGG | + | tig0015628:17853-17872 | None:intergenic | 25.0% |
| !!! | CTTTTGGTTATCAAAATTGT+TGG | - | tig0015628:17851-17870 | Msa1356390:intron | 25.0% |
| ! | TTACCAACTAATAACTATAG+AGG | - | tig0015628:18252-18271 | Msa1356390:intron | 25.0% |
| ! | TTACCAACTAATAACTATAG+AGG | - | tig0015628:18252-18271 | Msa1356390:intron | 25.0% |
| ! | TTACCAACTAATAACTATAG+AGG | - | tig0015628:18252-18271 | Msa1356390:intron | 25.0% |
| ! | TTCAAGATATTAGATCTCAA+AGG | - | tig0015628:18900-18919 | Msa1356390:intron | 25.0% |
| ! | TTATTTCCCATACTCTTTAT+CGG | + | tig0015628:19046-19065 | None:intergenic | 25.0% |
| ! | TTCAAGATATTAGATCTCAA+AGG | - | tig0015628:18900-18919 | Msa1356390:intron | 25.0% |
| ! | TTATTTCCCATACTCTTTAT+CGG | + | tig0015628:19046-19065 | None:intergenic | 25.0% |
| ! | GAAATTACATAAATATCCTC+AGG | + | tig0015628:19809-19828 | None:intergenic | 25.0% |
| !! | TTTTTGCCATTAATAGAGTT+AGG | + | tig0015628:19847-19866 | None:intergenic | 25.0% |
| ! | AAAATGCAAATAAGTGACAA+AGG | - | tig0015628:19863-19882 | Msa1356390:intron | 25.0% |
| ! | ATAGTAAAGAAAGAGACAAA+GGG | + | tig0015628:20389-20408 | None:intergenic | 25.0% |
| ! | GCTTGAAAAAAATATAAGTC+TGG | - | tig0015628:20727-20746 | Msa1356390:CDS | 25.0% |
| ! | ATGAATCATTCTATTACTAC+GGG | + | tig0015628:21282-21301 | None:intergenic | 25.0% |
| ! | CATGAATCATTCTATTACTA+CGG | + | tig0015628:21283-21302 | None:intergenic | 25.0% |
| ! | AAATCAAATGATCAGTTAGA+TGG | + | tig0015628:21324-21343 | None:intergenic | 25.0% |
| !! | TTCACCAGAAATTCTAATTT+TGG | + | tig0015628:21471-21490 | None:intergenic | 25.0% |
| ! | AGAAGATAAAACCAAGATAT+CGG | - | tig0015628:21556-21575 | Msa1356390:CDS | 25.0% |
| ! | TGTAAATATCATTACCTTGT+AGG | - | tig0015628:21709-21728 | Msa1356390:intron | 25.0% |
| !!! | GCTTTCTTTTTAAAAGTTAC+AGG | + | tig0015628:21766-21785 | None:intergenic | 25.0% |
| TGAGAATACTTTGTGAAAGT+GGG | + | tig0015628:13857-13876 | None:intergenic | 30.0% | |
| TTGAGAATACTTTGTGAAAG+TGG | + | tig0015628:13858-13877 | None:intergenic | 30.0% | |
| ! | TGAGTTTGATGCTATTGATT+CGG | + | tig0015628:14056-14075 | None:intergenic | 30.0% |
| TAACTTTGTTAATGAGAGAC+GGG | + | tig0015628:14321-14340 | None:intergenic | 30.0% | |
| GTAACTTTGTTAATGAGAGA+CGG | + | tig0015628:14322-14341 | None:intergenic | 30.0% | |
| AAAAAGGAGTTGTTTGATAG+AGG | + | tig0015628:14344-14363 | None:intergenic | 30.0% | |
| CATCTAGTGAAATTGATAAG+TGG | + | tig0015628:14429-14448 | None:intergenic | 30.0% | |
| ! | AGTGATAACAAAAGTATACG+AGG | + | tig0015628:14562-14581 | None:intergenic | 30.0% |
| TAATCACATCTCATCTATAC+TGG | - | tig0015628:14585-14604 | Msa1356390:intron | 30.0% | |
| CTGGATATTCTCCAAAATAT+TGG | - | tig0015628:14604-14623 | Msa1356390:intron | 30.0% | |
| GAAAAGCCAATATTATGTTG+GGG | + | tig0015628:14648-14667 | None:intergenic | 30.0% | |
| GGAAAAGCCAATATTATGTT+GGG | + | tig0015628:14649-14668 | None:intergenic | 30.0% | |
| AGGAAAAGCCAATATTATGT+TGG | + | tig0015628:14650-14669 | None:intergenic | 30.0% | |
| AAGTGCATTGTGATGTTTAT+AGG | - | tig0015628:14757-14776 | Msa1356390:intron | 30.0% | |
| AAAATAGACTTAGGTGGTTT+GGG | - | tig0015628:15004-15023 | Msa1356390:intron | 30.0% | |
| !! | CTTCTACTTTTGAATACTTC+TGG | + | tig0015628:15357-15376 | None:intergenic | 30.0% |
| AGAGTTGTGTGACATAATTT+AGG | - | tig0015628:15414-15433 | Msa1356390:intron | 30.0% | |
| AAGCATTCAAGAGAACTATA+AGG | - | tig0015628:15642-15661 | Msa1356390:intron | 30.0% | |
| TACCTTCACGGAATATAAAA+AGG | + | tig0015628:15677-15696 | None:intergenic | 30.0% | |
| !! | TCCAAAATAATTTGTTCCCT+AGG | - | tig0015628:15812-15831 | Msa1356390:intron | 30.0% |
| ! | TCCTAGGGAACAAATTATTT+TGG | + | tig0015628:15816-15835 | None:intergenic | 30.0% |
| TTGTTTACAGTTGTAAAGCA+TGG | - | tig0015628:15923-15942 | Msa1356390:intron | 30.0% | |
| AGAAAGTTGTAGCAAGTTAT+TGG | - | tig0015628:16087-16106 | Msa1356390:intron | 30.0% | |
| !! | GTTTTATTAGGCTAGATTTC+GGG | - | tig0015628:16141-16160 | Msa1356390:intron | 30.0% |
| ! | TTTTATTAGGCTAGATTTCG+GGG | - | tig0015628:16142-16161 | Msa1356390:intron | 30.0% |
| ATAGTTATTGGTACCATCTT+AGG | + | tig0015628:16190-16209 | None:intergenic | 30.0% | |
| CTATCCTATATTTGCATGTT+AGG | - | tig0015628:16206-16225 | Msa1356390:intron | 30.0% | |
| TCTATTGTGAATCATATCTG+TGG | - | tig0015628:16497-16516 | Msa1356390:intron | 30.0% | |
| ! | TTTCTCCGATTAGTGTTTTT+GGG | + | tig0015628:16544-16563 | None:intergenic | 30.0% |
| ! | TTTTCTCCGATTAGTGTTTT+TGG | + | tig0015628:16545-16564 | None:intergenic | 30.0% |
| TGCACACTTCTTTATGATTA+TGG | - | tig0015628:16581-16600 | Msa1356390:intron | 30.0% | |
| TTCTTTATGATTATGGCTGA+TGG | - | tig0015628:16588-16607 | Msa1356390:intron | 30.0% | |
| ATTCTTAATAAGGCAGCAAA+AGG | + | tig0015628:16620-16639 | None:intergenic | 30.0% | |
| !!! | AATGTTTTTGGTATATGTGG+TGG | - | tig0015628:16684-16703 | Msa1356390:intron | 30.0% |
| AAAAGACAACCTCAACTATT+GGG | - | tig0015628:16832-16851 | Msa1356390:intron | 30.0% | |
| AAATACCTGTAGAAAGTCTT+CGG | + | tig0015628:16971-16990 | None:intergenic | 30.0% | |
| TGAAGTAGACCACTATAAAT+AGG | + | tig0015628:17172-17191 | None:intergenic | 30.0% | |
| AATTACTTTCTGTGACAACT+CGG | + | tig0015628:17573-17592 | None:intergenic | 30.0% | |
| AGTTGTCACAGAAAGTAATT+TGG | - | tig0015628:17573-17592 | Msa1356390:intron | 30.0% | |
| GTTGTCACAGAAAGTAATTT+GGG | - | tig0015628:17574-17593 | Msa1356390:intron | 30.0% | |
| !!! | TAACCTGTCTCATTGTTTTT+TGG | - | tig0015628:17670-17689 | Msa1356390:intron | 30.0% |
| GACCTTCATGATAATAAACT+GGG | - | tig0015628:17692-17711 | Msa1356390:intron | 30.0% | |
| ATAATTGTCTTCAATGACTC+TGG | + | tig0015628:17776-17795 | None:intergenic | 30.0% | |
| !! | ACTTACAAGACAGTTTTGTA+AGG | - | tig0015628:18043-18062 | Msa1356390:intron | 30.0% |
| ACTCTATATCGGTCTATTAT+TGG | + | tig0015628:18131-18150 | None:intergenic | 30.0% | |
| AAATAGACCGATATAGAGTA+AGG | - | tig0015628:18190-18209 | Msa1356390:intron | 30.0% | |
| AATAGACCGATATAGAGTAA+GGG | - | tig0015628:18133-18152 | Msa1356390:intron | 30.0% | |
| CAACCTCTATAGTTATTAGT+TGG | + | tig0015628:18258-18277 | None:intergenic | 30.0% | |
| ATCTTCTGTCTAAGGATAAA+CGG | + | tig0015628:18299-18318 | None:intergenic | 30.0% | |
| ACTCTATATCGGTCTATTAT+TGG | + | tig0015628:18131-18150 | None:intergenic | 30.0% | |
| TAATAGACCGATATAGAGTA+AGG | - | tig0015628:18132-18151 | Msa1356390:intron | 30.0% | |
| AATAGACCGATATAGAGTAA+GGG | - | tig0015628:18133-18152 | Msa1356390:intron | 30.0% | |
| ACTCTATATCGGTCTATTAT+TGG | + | tig0015628:18131-18150 | None:intergenic | 30.0% | |
| TAATAGACCGATATAGAGTA+AGG | - | tig0015628:18132-18151 | Msa1356390:intron | 30.0% | |
| AATAGACCGATATAGAGTAA+GGG | - | tig0015628:18133-18152 | Msa1356390:intron | 30.0% | |
| CAACCTCTATAGTTATTAGT+TGG | + | tig0015628:18258-18277 | None:intergenic | 30.0% | |
| ATCTTCTGTCTAAGGATAAA+CGG | + | tig0015628:18299-18318 | None:intergenic | 30.0% | |
| ACTCTATATCGGTCTATTAT+TGG | + | tig0015628:18131-18150 | None:intergenic | 30.0% | |
| TAATAGACCGATATAGAGTA+AGG | - | tig0015628:18132-18151 | Msa1356390:intron | 30.0% | |
| AATAGACCGATATAGAGTAA+GGG | - | tig0015628:18133-18152 | Msa1356390:intron | 30.0% | |
| AAATAGACCGATATAGAGTA+AGG | - | tig0015628:18190-18209 | Msa1356390:intron | 30.0% | |
| AATAGACCGATATAGAGTAA+GGG | - | tig0015628:18133-18152 | Msa1356390:intron | 30.0% | |
| CAACCTCTATAGTTATTAGT+TGG | + | tig0015628:18258-18277 | None:intergenic | 30.0% | |
| ATCTTCTGTCTAAGGATAAA+CGG | + | tig0015628:18299-18318 | None:intergenic | 30.0% | |
| GAAGTCTAATATCTCAAGAA+TGG | + | tig0015628:18856-18875 | None:intergenic | 30.0% | |
| AGATATTAGACTTCAATTCC+TGG | - | tig0015628:18862-18881 | Msa1356390:intron | 30.0% | |
| GATATTAGACTTCAATTCCT+GGG | - | tig0015628:18863-18882 | Msa1356390:intron | 30.0% | |
| AATTCCTGGGAAATAATCAA+AGG | - | tig0015628:18876-18895 | Msa1356390:intron | 30.0% | |
| ACTCTTTATCGGTCTATTAT+TGG | + | tig0015628:19035-19054 | None:intergenic | 30.0% | |
| TAATAGACCGATAAAGAGTA+TGG | - | tig0015628:19036-19055 | Msa1356390:intron | 30.0% | |
| ! | AATAGACCGATAAAGAGTAT+GGG | - | tig0015628:19037-19056 | Msa1356390:intron | 30.0% |
| AGAGTATGGGAAATAATCAA+AGG | - | tig0015628:19050-19069 | Msa1356390:intron | 30.0% | |
| CTACCAACTAATAACTATAG+AGG | - | tig0015628:19108-19127 | Msa1356390:intron | 30.0% | |
| CAACCTCTATAGTTATTAGT+TGG | + | tig0015628:18258-18277 | None:intergenic | 30.0% | |
| ATCTTCTGTCTAAGGATAAA+CGG | + | tig0015628:18299-18318 | None:intergenic | 30.0% | |
| GAAGTCTAATATCTCAAGAA+TGG | + | tig0015628:18856-18875 | None:intergenic | 30.0% | |
| !! | TTTCTGGAATCATGATATAC+TGG | - | tig0015628:19360-19379 | Msa1356390:intron | 30.0% |
| ACTCTTTATCGGTCTATTAT+TGG | + | tig0015628:19035-19054 | None:intergenic | 30.0% | |
| TAATAGACCGATAAAGAGTA+TGG | - | tig0015628:19036-19055 | Msa1356390:intron | 30.0% | |
| ! | AATAGACCGATAAAGAGTAT+GGG | - | tig0015628:19037-19056 | Msa1356390:intron | 30.0% |
| AGAGTATGGGAAATAATCAA+AGG | - | tig0015628:19050-19069 | Msa1356390:intron | 30.0% | |
| ! | CTGTGATTTTACTAGTATTG+AGG | - | tig0015628:19454-19473 | Msa1356390:intron | 30.0% |
| GTATATTACAGTATCAGACT+AGG | - | tig0015628:19559-19578 | Msa1356390:intron | 30.0% | |
| TGTGATTTCTTGTGAAACAT+CGG | + | tig0015628:19594-19613 | None:intergenic | 30.0% | |
| ! | TAATAGAGTTAGGCATTGTT+TGG | + | tig0015628:19837-19856 | None:intergenic | 30.0% |
| ACAATGCCTAACTCTATTAA+TGG | - | tig0015628:19838-19857 | Msa1356390:intron | 30.0% | |
| ATGATATCATCAACATAACC+CGG | - | tig0015628:20033-20052 | Msa1356390:intron | 30.0% | |
| TAGCCAAAACGTTACAATTT+AGG | - | tig0015628:20207-20226 | Msa1356390:intron | 30.0% | |
| AGCCAAAACGTTACAATTTA+GGG | - | tig0015628:20208-20227 | Msa1356390:intron | 30.0% | |
| ! | TTCCCTAAATTGTAACGTTT+TGG | + | tig0015628:20213-20232 | None:intergenic | 30.0% |
| TTAATACACAAATTGACGGA+GGG | + | tig0015628:20282-20301 | None:intergenic | 30.0% | |
| TTTAATACACAAATTGACGG+AGG | + | tig0015628:20283-20302 | None:intergenic | 30.0% | |
| TAGTAAAGAAAGAGACAAAG+GGG | + | tig0015628:20388-20407 | None:intergenic | 30.0% | |
| CATAGTAAAGAAAGAGACAA+AGG | + | tig0015628:20390-20409 | None:intergenic | 30.0% | |
| TGTCTCTTTCTTTACTATGA+TGG | - | tig0015628:20391-20410 | Msa1356390:intron | 30.0% | |
| !!! | ATTTTGAAATTTCCAGTCAC+AGG | - | tig0015628:20470-20489 | Msa1356390:intron | 30.0% |
| TTAGCTTATGCTTGTAGTAT+TGG | + | tig0015628:20531-20550 | None:intergenic | 30.0% | |
| ! | AAGCATTGTTTACATCATGA+AGG | + | tig0015628:20677-20696 | None:intergenic | 30.0% |
| !!! | CTTTAGTGCTGCAATTTTTT+AGG | + | tig0015628:20701-20720 | None:intergenic | 30.0% |
| TTGTTTACACAATAAGCTCT+TGG | - | tig0015628:20839-20858 | Msa1356390:CDS | 30.0% | |
| ! | TAAAGTTTTACTAATGCTGG+TGG | + | tig0015628:20960-20979 | None:intergenic | 30.0% |
| ! | CTGTAAAGTTTTACTAATGC+TGG | + | tig0015628:20963-20982 | None:intergenic | 30.0% |
| !! | TTCTAAAGCTTACATTCCTT+TGG | - | tig0015628:21015-21034 | Msa1356390:CDS | 30.0% |
| TTAACAAAACCTTACCTCAA+CGG | - | tig0015628:21074-21093 | Msa1356390:CDS | 30.0% | |
| ! | TTAACTCACCCAATCATTTT+TGG | - | tig0015628:21180-21199 | Msa1356390:CDS | 30.0% |
| !! | TAACTCACCCAATCATTTTT+GGG | - | tig0015628:21181-21200 | Msa1356390:CDS | 30.0% |
| ATAGTGTACTTTATGAAGCT+AGG | - | tig0015628:21366-21385 | Msa1356390:CDS | 30.0% | |
| AGAGAAGGAAATTGCATTTA+TGG | - | tig0015628:21395-21414 | Msa1356390:CDS | 30.0% | |
| GATGCCAAAATTAGAATTTC+TGG | - | tig0015628:21464-21483 | Msa1356390:CDS | 30.0% | |
| GTGAATAGCTAAAATACCTA+GGG | + | tig0015628:21530-21549 | None:intergenic | 30.0% | |
| AGTGAATAGCTAAAATACCT+AGG | + | tig0015628:21531-21550 | None:intergenic | 30.0% | |
| GAAGATAAAACCAAGATATC+GGG | - | tig0015628:21557-21576 | Msa1356390:CDS | 30.0% | |
| GAATATCGAATGTAGCTTAA+AGG | - | tig0015628:21593-21612 | Msa1356390:CDS | 30.0% | |
| !! | AGAATTTGCTGCTGAATTTA+TGG | - | tig0015628:21638-21657 | Msa1356390:five_prime_UTR | 30.0% |
| !! | GAATTTGCTGCTGAATTTAT+GGG | - | tig0015628:21639-21658 | Msa1356390:five_prime_UTR | 30.0% |
| TGATAAGATGAATTCCTACA+AGG | + | tig0015628:21726-21745 | None:intergenic | 30.0% | |
| GAAAGCAATATGTGAAACGA+GGG | + | tig0015628:13602-13621 | None:intergenic | 35.0% | |
| GATATGGTTTCCTTTCTTTC+AGG | - | tig0015628:13684-13703 | Msa1356390:CDS | 35.0% | |
| TCTAGAGAAACCTGAAAGAA+AGG | + | tig0015628:13697-13716 | None:intergenic | 35.0% | |
| AGAAAGCAATTGGTGTGAAT+TGG | + | tig0015628:13767-13786 | None:intergenic | 35.0% | |
| GAGAATACTTTGTGAAAGTG+GGG | + | tig0015628:13856-13875 | None:intergenic | 35.0% | |
| !! | ACATGTTGGTAGAAAGTGTT+AGG | - | tig0015628:14089-14108 | Msa1356390:intron | 35.0% |
| !! | CATGTTGGTAGAAAGTGTTA+GGG | - | tig0015628:14090-14109 | Msa1356390:intron | 35.0% |
| GATGCTAATGCTAATGATGT+TGG | - | tig0015628:14142-14161 | Msa1356390:intron | 35.0% | |
| TCAACTTGAACTTCAACTAC+AGG | - | tig0015628:14170-14189 | Msa1356390:intron | 35.0% | |
| CAACTTGAACTTCAACTACA+GGG | - | tig0015628:14171-14190 | Msa1356390:intron | 35.0% | |
| TGAGGCGAATATTCTTGATA+AGG | + | tig0015628:14399-14418 | None:intergenic | 35.0% | |
| !!! | CACTTTCTCCTTTTTCGAAA+AGG | - | tig0015628:14462-14481 | Msa1356390:CDS | 35.0% |
| ! | TGCTTGAACCTTTTCGAAAA+AGG | + | tig0015628:14473-14492 | None:intergenic | 35.0% |
| ! | TTTTCGAAAAGGTTCAAGCA+AGG | - | tig0015628:14473-14492 | Msa1356390:CDS | 35.0% |
| TCAACATTCCAGAGCAAAAT+AGG | + | tig0015628:14673-14692 | None:intergenic | 35.0% | |
| AAAGAAAAATTTGGCGTACC+TGG | + | tig0015628:14726-14745 | None:intergenic | 35.0% | |
| ACATCACAATGCACTTTGTT+CGG | + | tig0015628:14753-14772 | None:intergenic | 35.0% | |
| ! | TTGCCTGAAAACTGCATTTT+TGG | - | tig0015628:14793-14812 | Msa1356390:intron | 35.0% |
| ATAGAGTGAGAGAGAAAAGA+TGG | - | tig0015628:14939-14958 | Msa1356390:intron | 35.0% | |
| !! | AAAAGATGGTGGAAAGATGT+TGG | - | tig0015628:14953-14972 | Msa1356390:intron | 35.0% |
| !! | AAAGATGGTGGAAAGATGTT+GGG | - | tig0015628:14954-14973 | Msa1356390:intron | 35.0% |
| TTTCCACCATCTTTCACTAT+AGG | + | tig0015628:14987-15006 | None:intergenic | 35.0% | |
| !! | AGATGGTGGAAAATAGACTT+AGG | - | tig0015628:14995-15014 | Msa1356390:intron | 35.0% |
| GAAAATAGACTTAGGTGGTT+TGG | - | tig0015628:15003-15022 | Msa1356390:intron | 35.0% | |
| !! | GTTGTTGTTGTTGTTTCTGT+TGG | - | tig0015628:15236-15255 | Msa1356390:intron | 35.0% |
| !!! | TTTTTTGTAGATTGACGGTG+TGG | - | tig0015628:15570-15589 | Msa1356390:intron | 35.0% |
| !!! | CGGATATTTTAGCATCAACA+TGG | + | tig0015628:15608-15627 | None:intergenic | 35.0% |
| TGTTGATGCTAAAATATCCG+TGG | - | tig0015628:15608-15627 | Msa1356390:intron | 35.0% | |
| GTTGATGCTAAAATATCCGT+GGG | - | tig0015628:15609-15628 | Msa1356390:intron | 35.0% | |
| CATTCAAGAGAACTATAAGG+AGG | - | tig0015628:15645-15664 | Msa1356390:intron | 35.0% | |
| TCACGGAATATAAAAAGGCA+AGG | + | tig0015628:15672-15691 | None:intergenic | 35.0% | |
| ! | TGCCTTTTTATATTCCGTGA+AGG | - | tig0015628:15672-15691 | Msa1356390:intron | 35.0% |
| ACACTACAATCATACCTTCA+CGG | + | tig0015628:15689-15708 | None:intergenic | 35.0% | |
| CACATAGGTATATCTTATGG+TGG | + | tig0015628:15994-16013 | None:intergenic | 35.0% | |
| AAGTTGTAGCAAGTTATTGG+TGG | - | tig0015628:16090-16109 | Msa1356390:intron | 35.0% | |
| ACCATCTTAGGATTTATGCA+AGG | + | tig0015628:16178-16197 | None:intergenic | 35.0% | |
| TCCCATATTAAGTAGAGACA+TGG | - | tig0015628:16304-16323 | Msa1356390:intron | 35.0% | |
| GCCATGTCTCTACTTAATAT+GGG | + | tig0015628:16308-16327 | None:intergenic | 35.0% | |
| AGCCATGTCTCTACTTAATA+TGG | + | tig0015628:16309-16328 | None:intergenic | 35.0% | |
| CTAGCTTATGAGGTTAAGTT+AGG | - | tig0015628:16371-16390 | Msa1356390:intron | 35.0% | |
| CTAATCGGAGAAAATCAACA+CGG | - | tig0015628:16551-16570 | Msa1356390:intron | 35.0% | |
| CAAAAGACAACCTCAACTAT+TGG | - | tig0015628:16831-16850 | Msa1356390:intron | 35.0% | |
| TCAGAGGAAAAAGTTGTATC+AGG | - | tig0015628:16909-16928 | Msa1356390:intron | 35.0% | |
| AATACCTGTAGAAAGTCTTC+GGG | + | tig0015628:16970-16989 | None:intergenic | 35.0% | |
| AGTGAGTGACCTATTTATAG+TGG | - | tig0015628:17160-17179 | Msa1356390:intron | 35.0% | |
| TGACAAAATTCTGGCATCAT+CGG | + | tig0015628:17220-17239 | None:intergenic | 35.0% | |
| GTTGTGTGTAGAAAGCTATT+TGG | + | tig0015628:17290-17309 | None:intergenic | 35.0% | |
| TCAAACACCTAAAGTTTGTC+TGG | - | tig0015628:17378-17397 | Msa1356390:intron | 35.0% | |
| TCTGATCAGTAGTAGGAATA+TGG | - | tig0015628:17452-17471 | Msa1356390:intron | 35.0% | |
| TATGGTGAACTATGAAGTTC+TGG | - | tig0015628:17470-17489 | Msa1356390:intron | 35.0% | |
| ATTACTTTCTGTGACAACTC+GGG | + | tig0015628:17572-17591 | None:intergenic | 35.0% | |
| AAAGTAATTTGGGTCTGGAA+GGG | - | tig0015628:17584-17603 | Msa1356390:intron | 35.0% | |
| TAGTGGTGCAAATATTCTGT+GGG | + | tig0015628:17639-17658 | None:intergenic | 35.0% | |
| ATAGTGGTGCAAATATTCTG+TGG | + | tig0015628:17640-17659 | None:intergenic | 35.0% | |
| CAGAATATTTGCACCACTAT+TGG | - | tig0015628:17640-17659 | Msa1356390:intron | 35.0% | |
| GGACCTTCATGATAATAAAC+TGG | - | tig0015628:17691-17710 | Msa1356390:intron | 35.0% | |
| GACCCAGTTTATTATCATGA+AGG | + | tig0015628:17697-17716 | None:intergenic | 35.0% | |
| !! | ATTTTGATAACCAAAAGGGG+TGG | + | tig0015628:17848-17867 | None:intergenic | 35.0% |
| !!! | CTTCATTTTGTTGGCTTTGA+GGG | - | tig0015628:17951-17970 | Msa1356390:intron | 35.0% |
| !!! | TTCATTTTGTTGGCTTTGAG+GGG | - | tig0015628:17952-17971 | Msa1356390:intron | 35.0% |
| GATAAGAGCTTATAAAGACG+AGG | - | tig0015628:18011-18030 | Msa1356390:intron | 35.0% | |
| CAAAACTGTCTTGTAAGTTG+AGG | + | tig0015628:18041-18060 | None:intergenic | 35.0% | |
| !! | CAGTTTTGTAAGGATGAGTT+AGG | - | tig0015628:18053-18072 | Msa1356390:intron | 35.0% |
| CGGTCTATCTTACTCTATAT+CGG | + | tig0015628:18142-18161 | None:intergenic | 35.0% | |
| AGATAGACCGATATAGAGTA+AGG | - | tig0015628:18152-18171 | Msa1356390:intron | 35.0% | |
| GATAGACCGATATAGAGTAA+GGG | - | tig0015628:18153-18172 | Msa1356390:intron | 35.0% | |
| TTCAGACCCTTACTCTATAT+CGG | + | tig0015628:18162-18181 | None:intergenic | 35.0% | |
| TTCAGACCCTTACTCTATAT+CGG | + | tig0015628:18162-18181 | None:intergenic | 35.0% | |
| TATAGAGGTTGAGATCTCAA+TGG | - | tig0015628:18267-18286 | Msa1356390:intron | 35.0% | |
| TATGTGTGATCTTCTGTCTA+AGG | + | tig0015628:18307-18326 | None:intergenic | 35.0% | |
| TAGACAGAAGATCACACATA+TGG | - | tig0015628:18307-18326 | Msa1356390:intron | 35.0% | |
| TATGTGTGATCTTCTGTCTA+AGG | + | tig0015628:18307-18326 | None:intergenic | 35.0% | |
| TAGACAGAAGATCACACATA+TGG | - | tig0015628:18307-18326 | Msa1356390:intron | 35.0% | |
| TTCAGACCCTTACTCTATAT+CGG | + | tig0015628:18162-18181 | None:intergenic | 35.0% | |
| TTCAGACCCTTACTCTATAT+CGG | + | tig0015628:18162-18181 | None:intergenic | 35.0% | |
| TTCAGACCCTTACTCTATAT+CGG | + | tig0015628:18162-18181 | None:intergenic | 35.0% | |
| TATAGAGGTTGAGATCTCAA+TGG | - | tig0015628:18267-18286 | Msa1356390:intron | 35.0% | |
| TATGTGTGATCTTCTGTCTA+AGG | + | tig0015628:18307-18326 | None:intergenic | 35.0% | |
| TAGACAGAAGATCACACATA+TGG | - | tig0015628:18307-18326 | Msa1356390:intron | 35.0% | |
| TTCAGACCCTTACTCTATAT+CGG | + | tig0015628:18162-18181 | None:intergenic | 35.0% | |
| TTCAGACCCTTACTCTATAT+CGG | + | tig0015628:18162-18181 | None:intergenic | 35.0% | |
| TATAGAGGTTGAGATCTCAA+TGG | - | tig0015628:18267-18286 | Msa1356390:intron | 35.0% | |
| TATGTGTGATCTTCTGTCTA+AGG | + | tig0015628:18307-18326 | None:intergenic | 35.0% | |
| CTCAAAGGTTTATAAAGACG+AGG | - | tig0015628:18915-18934 | Msa1356390:intron | 35.0% | |
| !! | TTTCTGGAATCGTGATATAC+TGG | - | tig0015628:19003-19022 | Msa1356390:intron | 35.0% |
| TATAGAGGTTGAGATCTCAA+TGG | - | tig0015628:18267-18286 | Msa1356390:intron | 35.0% | |
| TATGTGTGATCTTCTGTCTA+AGG | + | tig0015628:18307-18326 | None:intergenic | 35.0% | |
| AGATATTAGACTTCAACTCC+TGG | - | tig0015628:19219-19238 | Msa1356390:intron | 35.0% | |
| GATATTAGACTTCAACTCCT+GGG | - | tig0015628:19220-19239 | Msa1356390:intron | 35.0% | |
| AACTCCTGGGAAATAATCAA+AGG | - | tig0015628:19233-19252 | Msa1356390:intron | 35.0% | |
| CACAAGAAATCACATCTTTG+TGG | - | tig0015628:19600-19619 | Msa1356390:intron | 35.0% | |
| !! | TTGTCTTGAAAGTGTTCTCT+TGG | - | tig0015628:19704-19723 | Msa1356390:CDS | 35.0% |
| TGATATCATCAACATAACCC+GGG | - | tig0015628:20034-20053 | Msa1356390:intron | 35.0% | |
| ! | ATTTTCAAATTTCAGACCCC+GGG | + | tig0015628:20054-20073 | None:intergenic | 35.0% |
| ! | CATTTTCAAATTTCAGACCC+CGG | + | tig0015628:20055-20074 | None:intergenic | 35.0% |
| GTAAACAAGATTGCAAGAGT+GGG | + | tig0015628:20169-20188 | None:intergenic | 35.0% | |
| !! | GCTATTGTGTAATGGTTTTG+AGG | + | tig0015628:20191-20210 | None:intergenic | 35.0% |
| !!! | ACGTTTTGGCTATTGTGTAA+TGG | + | tig0015628:20199-20218 | None:intergenic | 35.0% |
| GACCAACAGAAGTAACATTT+GGG | + | tig0015628:20239-20258 | None:intergenic | 35.0% | |
| TGACCAACAGAAGTAACATT+TGG | + | tig0015628:20240-20259 | None:intergenic | 35.0% | |
| GAAAAGAAAAGAGTGAGAGA+AGG | + | tig0015628:20357-20376 | None:intergenic | 35.0% | |
| !!! | AAAGTTTTTTGTCCTGTGAC+TGG | + | tig0015628:20485-20504 | None:intergenic | 35.0% |
| ! | GAAGGAAACTTAAGTACTGT+TGG | + | tig0015628:20659-20678 | None:intergenic | 35.0% |
| ATTGAGTTCCTTAGGAGAAT+TGG | - | tig0015628:20989-21008 | Msa1356390:CDS | 35.0% | |
| TAGAAACACCAATTCTCCTA+AGG | + | tig0015628:21000-21019 | None:intergenic | 35.0% | |
| GGATACTTTCTGATAACCAA+AGG | + | tig0015628:21034-21053 | None:intergenic | 35.0% | |
| ATAACAATACCGTTGAGGTA+AGG | + | tig0015628:21086-21105 | None:intergenic | 35.0% | |
| GAATCATAACAATACCGTTG+AGG | + | tig0015628:21091-21110 | None:intergenic | 35.0% | |
| CAAATGATCAGTTAGATGGT+TGG | + | tig0015628:21320-21339 | None:intergenic | 35.0% | |
| ! | TTGATATGTTGTTGTTCTGC+AGG | - | tig0015628:21343-21362 | Msa1356390:CDS | 35.0% |
| ! | GTACATTTTCTCCTCTACTT+GGG | - | tig0015628:21421-21440 | Msa1356390:CDS | 35.0% |
| ATGTAGCTTAAAGGATATGC+TGG | - | tig0015628:21602-21621 | Msa1356390:CDS | 35.0% | |
| AGCTTATCATGTGAAGACAA+GGG | + | tig0015628:21690-21709 | None:intergenic | 35.0% | |
| ATGACAAAGCATGCTTGATT+TGG | - | tig0015628:21833-21852 | Msa1356390:five_prime_UTR | 35.0% | |
| ATGTGTAGACGAACTCCAAA+TGG | + | tig0015628:13550-13569 | None:intergenic | 40.0% | |
| CGAAAGCAATATGTGAAACG+AGG | + | tig0015628:13603-13622 | None:intergenic | 40.0% | |
| AGAGATGAACAGAACAGAAC+AGG | + | tig0015628:13642-13661 | None:intergenic | 40.0% | |
| GACAAGTGGAAGAAAGCAAT+TGG | + | tig0015628:13777-13796 | None:intergenic | 40.0% | |
| TGCGTTTCCACATAAGATTC+AGG | - | tig0015628:13802-13821 | Msa1356390:CDS | 40.0% | |
| CGAACATCCTGAATCTTATG+TGG | + | tig0015628:13812-13831 | None:intergenic | 40.0% | |
| ! | GATTCAGGATGTTCGTTTTG+TGG | - | tig0015628:13817-13836 | Msa1356390:CDS | 40.0% |
| AGACGTTCATATTGTCGTTC+TGG | - | tig0015628:13935-13954 | Msa1356390:CDS | 40.0% | |
| GACGTTCATATTGTCGTTCT+GGG | - | tig0015628:13936-13955 | Msa1356390:CDS | 40.0% | |
| !! | ATATTGTCGTTCTGGGATGA+GGG | - | tig0015628:13943-13962 | Msa1356390:CDS | 40.0% |
| TCTTCAACAAATGGGTGTGT+CGG | - | tig0015628:14021-14040 | Msa1356390:intron | 40.0% | |
| !! | TGCTATTGATTCGGATTCCT+CGG | + | tig0015628:14047-14066 | None:intergenic | 40.0% |
| ACCAGCATATCTCAACATGT+TGG | - | tig0015628:14075-14094 | Msa1356390:intron | 40.0% | |
| ACCAACATGTTGAGATATGC+TGG | + | tig0015628:14079-14098 | None:intergenic | 40.0% | |
| !! | GGTAGAAAGTGTTAGGGATT+TGG | - | tig0015628:14096-14115 | Msa1356390:intron | 40.0% |
| ATTAGCATTAGCATCCAGCA+TGG | + | tig0015628:14137-14156 | None:intergenic | 40.0% | |
| CTAGCTTACTTAGAGAGTCT+CGG | - | tig0015628:14238-14257 | Msa1356390:intron | 40.0% | |
| TTTGTTAATGAGAGACGGGA+GGG | + | tig0015628:14317-14336 | None:intergenic | 40.0% | |
| ATAGTGATGAGTAGTGTGAG+CGG | + | tig0015628:14371-14390 | None:intergenic | 40.0% | |
| TTGATAAGTGGGTCATGATG+AGG | + | tig0015628:14417-14436 | None:intergenic | 40.0% | |
| TCGCATCCCCAACATAATAT+TGG | - | tig0015628:14639-14658 | Msa1356390:intron | 40.0% | |
| ! | CTTTTCCTCCTATTTTGCTC+TGG | - | tig0015628:14662-14681 | Msa1356390:intron | 40.0% |
| ACATTCCAGAGCAAAATAGG+AGG | + | tig0015628:14670-14689 | None:intergenic | 40.0% | |
| ACTCCTTCAAACTAGAGTTC+TGG | - | tig0015628:14693-14712 | Msa1356390:intron | 40.0% | |
| ! | GCACCAAAAATGCAGTTTTC+AGG | + | tig0015628:14799-14818 | None:intergenic | 40.0% |
| ! | CGAAGATGATGATGTTGTGT+CGG | - | tig0015628:14867-14886 | Msa1356390:intron | 40.0% |
| !! | AAGATGGTGGAAAGATGTTG+GGG | - | tig0015628:14955-14974 | Msa1356390:intron | 40.0% |
| GTAGCACCTATAGTGAAAGA+TGG | - | tig0015628:14978-14997 | Msa1356390:intron | 40.0% | |
| TGGTGGAAAATAGACTTAGG+TGG | - | tig0015628:14998-15017 | Msa1356390:intron | 40.0% | |
| CTCGTTACTACATAATCTCC+AGG | + | tig0015628:15045-15064 | None:intergenic | 40.0% | |
| GATCAGAGTTAGATCACTAG+AGG | - | tig0015628:15069-15088 | Msa1356390:intron | 40.0% | |
| ! | AAGTCTTATCCCACTAAGTG+GGG | + | tig0015628:15215-15234 | None:intergenic | 40.0% |
| ! | CAAGTCTTATCCCACTAAGT+GGG | + | tig0015628:15216-15235 | None:intergenic | 40.0% |
| ATATGATAGCCGCTGAGAAT+GGG | + | tig0015628:15467-15486 | None:intergenic | 40.0% | |
| ATGCTTGTAGATAGAACCCA+CGG | + | tig0015628:15628-15647 | None:intergenic | 40.0% | |
| AGTTGTAAAGCATGGTCGTA+TGG | - | tig0015628:15931-15950 | Msa1356390:intron | 40.0% | |
| TCGTATGGCTGAAGTCAAAT+TGG | - | tig0015628:15946-15965 | Msa1356390:intron | 40.0% | |
| GCCTTGCATAAATCCTAAGA+TGG | - | tig0015628:16174-16193 | Msa1356390:intron | 40.0% | |
| GAGGCCTAACATGCAAATAT+AGG | + | tig0015628:16213-16232 | None:intergenic | 40.0% | |
| !! | ATGTCCAATTTTGGCGTAAG+AGG | - | tig0015628:16269-16288 | Msa1356390:intron | 40.0% |
| !! | TGTCCAATTTTGGCGTAAGA+GGG | - | tig0015628:16270-16289 | Msa1356390:intron | 40.0% |
| TAACCTCATAAGCTAGCTCA+AGG | + | tig0015628:16367-16386 | None:intergenic | 40.0% | |
| GAAGGCCCAAAAACACTAAT+CGG | - | tig0015628:16536-16555 | Msa1356390:intron | 40.0% | |
| TATGATTATGGCTGATGGCT+TGG | - | tig0015628:16593-16612 | Msa1356390:intron | 40.0% | |
| TTTGGTATATGTGGTGGTAG+TGG | - | tig0015628:16690-16709 | Msa1356390:intron | 40.0% | |
| TTGGTATATGTGGTGGTAGT+GGG | - | tig0015628:16691-16710 | Msa1356390:intron | 40.0% | |
| CATTCTAGGTTCCAAAGACA+TGG | - | tig0015628:16794-16813 | Msa1356390:intron | 40.0% | |
| !! | GAGGTTGTCTTTTGATTGCA+CGG | + | tig0015628:16825-16844 | None:intergenic | 40.0% |
| GTTGAACAACCCAATAGTTG+AGG | + | tig0015628:16844-16863 | None:intergenic | 40.0% | |
| AACTAGCAAGCTGAAGTTGA+TGG | - | tig0015628:16861-16880 | Msa1356390:intron | 40.0% | |
| TTTCCTCTGAACTCCTAGTT+CGG | + | tig0015628:16899-16918 | None:intergenic | 40.0% | |
| GGCTTCTGTAATAATAGCTG+AGG | + | tig0015628:16949-16968 | None:intergenic | 40.0% | |
| ! | AAATTCTGGCATCATCGGTT+AGG | + | tig0015628:17215-17234 | None:intergenic | 40.0% |
| TGACTAATATGGCGTCTGAA+AGG | - | tig0015628:17256-17275 | Msa1356390:intron | 40.0% | |
| GTTAGGGTGTAGTCTCATAT+TGG | + | tig0015628:17315-17334 | None:intergenic | 40.0% | |
| TGCTCTTCCAGACAAACTTT+AGG | + | tig0015628:17388-17407 | None:intergenic | 40.0% | |
| TCAGCATTCTGATCAGTAGT+AGG | - | tig0015628:17445-17464 | Msa1356390:intron | 40.0% | |
| TGACATCTTTGTGCTAGAGA+AGG | + | tig0015628:17503-17522 | None:intergenic | 40.0% | |
| ACAAAGATGTCAAGTTCCAG+AGG | - | tig0015628:17511-17530 | Msa1356390:intron | 40.0% | |
| CACAGAAAGTAATTTGGGTC+TGG | - | tig0015628:17579-17598 | Msa1356390:intron | 40.0% | |
| GAAAGTAATTTGGGTCTGGA+AGG | - | tig0015628:17583-17602 | Msa1356390:intron | 40.0% | |
| TATTTGCACCACTATTGGCA+AGG | - | tig0015628:17645-17664 | Msa1356390:intron | 40.0% | |
| AGGTTAAACCTTGCCAATAG+TGG | + | tig0015628:17656-17675 | None:intergenic | 40.0% | |
| GGTCCAAAAAACAATGAGAC+AGG | + | tig0015628:17676-17695 | None:intergenic | 40.0% | |
| TCTGAGTCGAGCATTTATCT+TGG | + | tig0015628:17719-17738 | None:intergenic | 40.0% | |
| GCAACTTAAATGCCGCAATT+AGG | + | tig0015628:17910-17929 | None:intergenic | 40.0% | |
| ! | CTCCAACACCTTCATTTTGT+TGG | - | tig0015628:17942-17961 | Msa1356390:intron | 40.0% |
| ! | AGCCAACAAAATGAAGGTGT+TGG | + | tig0015628:17947-17966 | None:intergenic | 40.0% |
| CCTCAAAGCCAACAAAATGA+AGG | + | tig0015628:17953-17972 | None:intergenic | 40.0% | |
| !!! | CCTTCATTTTGTTGGCTTTG+AGG | - | tig0015628:17950-17969 | Msa1356390:intron | 40.0% |
| !!! | TCATTTTGTTGGCTTTGAGG+GGG | - | tig0015628:17953-17972 | Msa1356390:intron | 40.0% |
| ! | GAGTCTTATCTATCCGATGT+GGG | + | tig0015628:17989-18008 | None:intergenic | 40.0% |
| ! | AGAGTCTTATCTATCCGATG+TGG | + | tig0015628:17990-18009 | None:intergenic | 40.0% |
| !! | TTTCTGGAATCGTGACATTC+TGG | - | tig0015628:18099-18118 | Msa1356390:intron | 40.0% |
| GAAGCCTTTGATTATTTCCC+AGG | + | tig0015628:18883-18902 | None:intergenic | 40.0% | |
| CTAACTCATCCTTACGAAAC+CGG | + | tig0015628:18959-18978 | None:intergenic | 40.0% | |
| GAAGCCTTTGATTATTTCCC+AGG | + | tig0015628:18883-18902 | None:intergenic | 40.0% | |
| CTAACTCATCCTTACGAAAC+CGG | + | tig0015628:18959-18978 | None:intergenic | 40.0% | |
| GATATCATCAACATAACCCG+GGG | - | tig0015628:20035-20054 | Msa1356390:intron | 40.0% | |
| ! | CGGGGTCTGAAATTTGAAAA+TGG | - | tig0015628:20053-20072 | Msa1356390:intron | 40.0% |
| GATTATCTGTGCATCATGAC+TGG | + | tig0015628:20114-20133 | None:intergenic | 40.0% | |
| GGGTGGGAAATAGCTAATTT+CGG | + | tig0015628:20136-20155 | None:intergenic | 40.0% | |
| GGTAAACAAGATTGCAAGAG+TGG | + | tig0015628:20170-20189 | None:intergenic | 40.0% | |
| ! | TGCCCAAATGTTACTTCTGT+TGG | - | tig0015628:20234-20253 | Msa1356390:intron | 40.0% |
| ! | TTGACGGAGGGTTAATGTTT+TGG | + | tig0015628:20270-20289 | None:intergenic | 40.0% |
| AAAAGAGTGAGAGAAGGTGA+AGG | + | tig0015628:20351-20370 | None:intergenic | 40.0% | |
| TAGAGCTATTGCTTCACTGT+TGG | + | tig0015628:20444-20463 | None:intergenic | 40.0% | |
| GTTAGAACCATTCCTGCTTT+AGG | - | tig0015628:20557-20576 | Msa1356390:intron | 40.0% | |
| TGCAAAACCTAAAGCAGGAA+TGG | + | tig0015628:20567-20586 | None:intergenic | 40.0% | |
| GATCATGCAAAACCTAAAGC+AGG | + | tig0015628:20572-20591 | None:intergenic | 40.0% | |
| TCTTGGTCATTGTTGTCTAC+AGG | - | tig0015628:20856-20875 | Msa1356390:CDS | 40.0% | |
| TGCTGGTGGCAAAAATTTCA+GGG | + | tig0015628:20946-20965 | None:intergenic | 40.0% | |
| ATGCTGGTGGCAAAAATTTC+AGG | + | tig0015628:20947-20966 | None:intergenic | 40.0% | |
| AGAGCAAGATTGAGTTCCTT+AGG | - | tig0015628:20981-21000 | Msa1356390:CDS | 40.0% | |
| ATGTCAGACACAAGTAGTTC+TGG | + | tig0015628:21055-21074 | None:intergenic | 40.0% | |
| CTCACTGCCCAAAAATGATT+GGG | + | tig0015628:21191-21210 | None:intergenic | 40.0% | |
| ACTCACTGCCCAAAAATGAT+TGG | + | tig0015628:21192-21211 | None:intergenic | 40.0% | |
| ! | CGTACATTTTCTCCTCTACT+TGG | - | tig0015628:21420-21439 | Msa1356390:CDS | 40.0% |
| TTTATGCTGTACCCAAGTAG+AGG | + | tig0015628:21435-21454 | None:intergenic | 40.0% | |
| TCTACTTGGGTACAGCATAA+AGG | - | tig0015628:21434-21453 | Msa1356390:CDS | 40.0% | |
| TTCTGGTGAACTCAATGAAG+AGG | - | tig0015628:21481-21500 | Msa1356390:CDS | 40.0% | |
| TTATCATGTGAAGACAAGGG+AGG | + | tig0015628:21687-21706 | None:intergenic | 40.0% | |
| CAGCTTATCATGTGAAGACA+AGG | + | tig0015628:21691-21710 | None:intergenic | 40.0% | |
| CTTAGAGCAACATGTGAGAG+AGG | + | tig0015628:13514-13533 | None:intergenic | 45.0% | |
| AGACGAACTCCAAATGGATG+AGG | + | tig0015628:13544-13563 | None:intergenic | 45.0% | |
| !! | CATATTGTCGTTCTGGGATG+AGG | - | tig0015628:13942-13961 | Msa1356390:CDS | 45.0% |
| GGACACAGTAGTCTCTGATT+GGG | - | tig0015628:13964-13983 | Msa1356390:CDS | 45.0% | |
| TCACTTCTCTTCTTCCATGC+TGG | - | tig0015628:14120-14139 | Msa1356390:intron | 45.0% | |
| CTTCACATTGCAGCTCTCAA+AGG | - | tig0015628:14202-14221 | Msa1356390:intron | 45.0% | |
| ATACCTGGCGACATTCATTG+AGG | + | tig0015628:14278-14297 | None:intergenic | 45.0% | |
| CTTTGTTAATGAGAGACGGG+AGG | + | tig0015628:14318-14337 | None:intergenic | 45.0% | |
| TAGTGATGAGTAGTGTGAGC+GGG | + | tig0015628:14370-14389 | None:intergenic | 45.0% | |
| ! | AGGCCAGAACTCTAGTTTGA+AGG | + | tig0015628:14699-14718 | None:intergenic | 45.0% |
| AATTTGGCGTACCTGGTTCA+AGG | + | tig0015628:14719-14738 | None:intergenic | 45.0% | |
| ATGATGTTGTGTCGGATGTG+TGG | - | tig0015628:14875-14894 | Msa1356390:intron | 45.0% | |
| GAGTGAGAGAGAAAAGATGG+TGG | - | tig0015628:14942-14961 | Msa1356390:intron | 45.0% | |
| !! | AGATGGTGGAAAGATGTTGG+GGG | - | tig0015628:14956-14975 | Msa1356390:intron | 45.0% |
| GCACCTATAGTGAAAGATGG+TGG | - | tig0015628:14981-15000 | Msa1356390:intron | 45.0% | |
| AGTTAGATCACTAGAGGCAG+AGG | - | tig0015628:15075-15094 | Msa1356390:intron | 45.0% | |
| ! | CCAAGTCTTATCCCACTAAG+TGG | + | tig0015628:15217-15236 | None:intergenic | 45.0% |
| CCACTTAGTGGGATAAGACT+TGG | - | tig0015628:15214-15233 | Msa1356390:intron | 45.0% | |
| TCTGATTTCCCCATTCTCAG+CGG | - | tig0015628:15455-15474 | Msa1356390:intron | 45.0% | |
| TATGATAGCCGCTGAGAATG+GGG | + | tig0015628:15466-15485 | None:intergenic | 45.0% | |
| GATATGATAGCCGCTGAGAA+TGG | + | tig0015628:15468-15487 | None:intergenic | 45.0% | |
| TGTAGTGTCATGAGTGCTTG+TGG | - | tig0015628:15701-15720 | Msa1356390:intron | 45.0% | |
| GTCAAATTGGTGTACATGCC+AGG | - | tig0015628:15959-15978 | Msa1356390:intron | 45.0% | |
| ! | TTATGGTGGTAGTGATTGCC+TGG | + | tig0015628:15980-15999 | None:intergenic | 45.0% |
| TTGCAGGACAGGACATCTAT+GGG | + | tig0015628:16235-16254 | None:intergenic | 45.0% | |
| TTTGCAGGACAGGACATCTA+TGG | + | tig0015628:16236-16255 | None:intergenic | 45.0% | |
| ! | ATCTAGAGCGCAAAGTTTGC+AGG | + | tig0015628:16251-16270 | None:intergenic | 45.0% |
| !! | GCGCTCTAGATGTCCAATTT+TGG | - | tig0015628:16260-16279 | Msa1356390:intron | 45.0% |
| !! | GTCCAATTTTGGCGTAAGAG+GGG | - | tig0015628:16271-16290 | Msa1356390:intron | 45.0% |
| ATAAGCTAGCTCAAGGAGTG+AGG | + | tig0015628:16360-16379 | None:intergenic | 45.0% | |
| ! | ACTCCTTGAGCTAGCTTATG+AGG | - | tig0015628:16361-16380 | Msa1356390:intron | 45.0% |
| !! | TCACCTAGTTGGTAAGGCTT+GGG | + | tig0015628:16443-16462 | None:intergenic | 45.0% |
| !! | TTCACCTAGTTGGTAAGGCT+TGG | + | tig0015628:16444-16463 | None:intergenic | 45.0% |
| CCTTACCAACTAGGTGAAAC+CGG | - | tig0015628:16446-16465 | Msa1356390:intron | 45.0% | |
| AACCGGCTACTTGGATCAAA+CGG | - | tig0015628:16463-16482 | Msa1356390:intron | 45.0% | |
| ! | TTTTGGGCCTTCTGAGTCAA+TGG | + | tig0015628:16528-16547 | None:intergenic | 45.0% |
| !! | ATATGTGGTGGTAGTGGGTA+AGG | - | tig0015628:16696-16715 | Msa1356390:intron | 45.0% |
| GTAGATCAGTTTGCCGAACT+AGG | - | tig0015628:16883-16902 | Msa1356390:intron | 45.0% | |
| TTGAGCAGAGGAGAAAATGC+AGG | - | tig0015628:17056-17075 | Msa1356390:intron | 45.0% | |
| AGTTTGAGGGGACATCGTTA+GGG | + | tig0015628:17331-17350 | None:intergenic | 45.0% | |
| TCAACCACCTTGAGTTTGAG+GGG | + | tig0015628:17343-17362 | None:intergenic | 45.0% | |
| CTCAACCACCTTGAGTTTGA+GGG | + | tig0015628:17344-17363 | None:intergenic | 45.0% | |
| TGTCTTCAATGACTCTGGCA+GGG | + | tig0015628:17771-17790 | None:intergenic | 45.0% | |
| TTGTCTTCAATGACTCTGGC+AGG | + | tig0015628:17772-17791 | None:intergenic | 45.0% | |
| ATGCCGCAATTAGGTGACTA+GGG | + | tig0015628:17901-17920 | None:intergenic | 45.0% | |
| AATGCCGCAATTAGGTGACT+AGG | + | tig0015628:17902-17921 | None:intergenic | 45.0% | |
| CCAGTTTGACAGTGGGAATT+GGG | + | tig0015628:18079-18098 | None:intergenic | 45.0% | |
| ACCAGTTTGACAGTGGGAAT+TGG | + | tig0015628:18080-18099 | None:intergenic | 45.0% | |
| CCAGAAACCAGTTTGACAGT+GGG | + | tig0015628:18086-18105 | None:intergenic | 45.0% | |
| TCCAGAAACCAGTTTGACAG+TGG | + | tig0015628:18087-18106 | None:intergenic | 45.0% | |
| CGGTTTCGTAAGGATGAGTT+AGG | - | tig0015628:18957-18976 | Msa1356390:intron | 45.0% | |
| CCAGTTTGACAGTGGGAATT+GGG | + | tig0015628:18079-18098 | None:intergenic | 45.0% | |
| ACCAGTTTGACAGTGGGAAT+TGG | + | tig0015628:18080-18099 | None:intergenic | 45.0% | |
| CCAGAAACCAGTTTGACAGT+GGG | + | tig0015628:18086-18105 | None:intergenic | 45.0% | |
| TCCAGAAACCAGTTTGACAG+TGG | + | tig0015628:18087-18106 | None:intergenic | 45.0% | |
| CGGTTTCGTAAGGATGAGTT+AGG | - | tig0015628:18957-18976 | Msa1356390:intron | 45.0% | |
| CCAGTTTGACAGTGGGAATT+GGG | + | tig0015628:18079-18098 | None:intergenic | 45.0% | |
| ACCAGTTTGACAGTGGGAAT+TGG | + | tig0015628:18080-18099 | None:intergenic | 45.0% | |
| CCAGAAACCAGTTTGACAGT+GGG | + | tig0015628:18086-18105 | None:intergenic | 45.0% | |
| TCCAGAAACCAGTTTGACAG+TGG | + | tig0015628:18087-18106 | None:intergenic | 45.0% | |
| ATGTGACTCCTCTCATTCAG+CGG | + | tig0015628:20015-20034 | None:intergenic | 45.0% | |
| CAAGAGTGGGATTATGCTGA+GGG | + | tig0015628:20156-20175 | None:intergenic | 45.0% | |
| GAAAGAGACAAAGGGGAAGA+AGG | + | tig0015628:20381-20400 | None:intergenic | 45.0% | |
| !! | TTGCTTCACTGTTGGTTTGC+AGG | + | tig0015628:20436-20455 | None:intergenic | 45.0% |
| GAAGCTAGGACTTTCAGAGA+AGG | - | tig0015628:21380-21399 | Msa1356390:CDS | 45.0% | |
| ACTTGGGTACAGCATAAAGG+AGG | - | tig0015628:21437-21456 | Msa1356390:CDS | 45.0% | |
| CCTTTCAGAACCCGATATCT+TGG | + | tig0015628:21570-21589 | None:intergenic | 45.0% | |
| !! | CCAAGATATCGGGTTCTGAA+AGG | - | tig0015628:21567-21586 | Msa1356390:CDS | 45.0% |
| !! | GATATCGGGTTCTGAAAGGA+AGG | - | tig0015628:21571-21590 | Msa1356390:CDS | 45.0% |
| GCTGCTGAATTTATGGGTGT+TGG | - | tig0015628:21645-21664 | Msa1356390:five_prime_UTR | 45.0% | |
| !! | GTAAATATTAAAATATTAAT+TGG | - | tig0015628:16044-16063 | Msa1356390:intron | 5.0% |
| AGAGCAACATGTGAGAGAGG+CGG | + | tig0015628:13511-13530 | None:intergenic | 50.0% | |
| AGTTACCCGCCTCATCCATT+TGG | - | tig0015628:13532-13551 | Msa1356390:three_prime_UTR | 50.0% | |
| GAACTCCAAATGGATGAGGC+GGG | + | tig0015628:13540-13559 | None:intergenic | 50.0% | |
| CGAACTCCAAATGGATGAGG+CGG | + | tig0015628:13541-13560 | None:intergenic | 50.0% | |
| GTGAAACGAGGGAAGAACGA+TGG | + | tig0015628:13591-13610 | None:intergenic | 50.0% | |
| GGAAACGCAGCATAGACAAG+TGG | + | tig0015628:13791-13810 | None:intergenic | 50.0% | |
| GGGACACAGTAGTCTCTGAT+TGG | - | tig0015628:13963-13982 | Msa1356390:CDS | 50.0% | |
| AGTCTCTGATTGGGAACTGC+AGG | - | tig0015628:13973-13992 | Msa1356390:CDS | 50.0% | |
| TCTGATTGGGAACTGCAGGA+AGG | - | tig0015628:13977-13996 | Msa1356390:CDS | 50.0% | |
| GCAGCTCTCAAAGGTGACAA+CGG | - | tig0015628:14211-14230 | Msa1356390:intron | 50.0% | |
| CTTCCTCAATGAATGTCGCC+AGG | - | tig0015628:14272-14291 | Msa1356390:intron | 50.0% | |
| GTCAGCGGAGGATATATACC+TGG | + | tig0015628:14293-14312 | None:intergenic | 50.0% | |
| TAGTGTGAGCGGGAGGAAAA+AGG | + | tig0015628:14360-14379 | None:intergenic | 50.0% | |
| GAAAAGGTTCAAGCAAGGCG+TGG | - | tig0015628:14478-14497 | Msa1356390:CDS | 50.0% | |
| AAGCAGCATCTTGAGAAGCG+AGG | + | tig0015628:14516-14535 | None:intergenic | 50.0% | |
| ! | CTGCGGGGATCCCAATATTT+TGG | + | tig0015628:14618-14637 | None:intergenic | 50.0% |
| TATGTTGGGGATGCGATCTG+CGG | + | tig0015628:14635-14654 | None:intergenic | 50.0% | |
| !! | TAGAGTTCTGGCCTTGAACC+AGG | - | tig0015628:14705-14724 | Msa1356390:intron | 50.0% |
| ! | TAGGTGGTTTGGGCATGTAG+AGG | - | tig0015628:15014-15033 | Msa1356390:intron | 50.0% |
| CTTATCCCACTAAGTGGGGT+CGG | + | tig0015628:15211-15230 | None:intergenic | 50.0% | |
| CACCCCTCTTACGCCAAAAT+TGG | + | tig0015628:16276-16295 | None:intergenic | 50.0% | |
| !! | ACCTAGTTGGTAAGGCTTGG+GGG | + | tig0015628:16441-16460 | None:intergenic | 50.0% |
| !! | CACCTAGTTGGTAAGGCTTG+GGG | + | tig0015628:16442-16461 | None:intergenic | 50.0% |
| ! | CCGGTTTCACCTAGTTGGTA+AGG | + | tig0015628:16449-16468 | None:intergenic | 50.0% |
| ! | AGTAGCCGGTTTCACCTAGT+TGG | + | tig0015628:16454-16473 | None:intergenic | 50.0% |
| ACTAGGTGAAACCGGCTACT+TGG | - | tig0015628:16454-16473 | Msa1356390:intron | 50.0% | |
| !! | GGCCAAACCATTGACTCAGA+AGG | - | tig0015628:16518-16537 | Msa1356390:intron | 50.0% |
| GGCCTTCTGAGTCAATGGTT+TGG | + | tig0015628:16523-16542 | None:intergenic | 50.0% | |
| TTGCCGAACTAGGAGTTCAG+AGG | - | tig0015628:16893-16912 | Msa1356390:intron | 50.0% | |
| GAAGCCCGAAGACTTTCTAC+AGG | - | tig0015628:16963-16982 | Msa1356390:intron | 50.0% | |
| GAGTTTGAGGGGACATCGTT+AGG | + | tig0015628:17332-17351 | None:intergenic | 50.0% | |
| ACGATGTCCCCTCAAACTCA+AGG | - | tig0015628:17333-17352 | Msa1356390:intron | 50.0% | |
| ATGTCCCCTCAAACTCAAGG+TGG | - | tig0015628:17336-17355 | Msa1356390:intron | 50.0% | |
| GCTCAACCACCTTGAGTTTG+AGG | + | tig0015628:17345-17364 | None:intergenic | 50.0% | |
| ATGAACCACCGTTTGCAGAG+AGG | - | tig0015628:17409-17428 | Msa1356390:intron | 50.0% | |
| CCACAAAGCCTCTCTGCAAA+CGG | + | tig0015628:17420-17439 | None:intergenic | 50.0% | |
| ! | CGTTTGCAGAGAGGCTTTGT+GGG | - | tig0015628:17418-17437 | Msa1356390:intron | 50.0% |
| ! | GTTTGCAGAGAGGCTTTGTG+GGG | - | tig0015628:17419-17438 | Msa1356390:intron | 50.0% |
| ! | AAGTTCCAGAGGAAGAGCAC+TGG | - | tig0015628:17522-17541 | Msa1356390:intron | 50.0% |
| !! | GAGCACTGGACTGTGTGATA+AGG | - | tig0015628:17536-17555 | Msa1356390:intron | 50.0% |
| AAGTGCAGTCAGTCCCATCT+GGG | - | tig0015628:17738-17757 | Msa1356390:intron | 50.0% | |
| GTCTTCAATGACTCTGGCAG+GGG | + | tig0015628:17770-17789 | None:intergenic | 50.0% | |
| !! | ATAGAAATGGGCTGTCGAGC+AGG | - | tig0015628:17794-17813 | Msa1356390:intron | 50.0% |
| !! | TAGAAATGGGCTGTCGAGCA+GGG | - | tig0015628:17795-17814 | Msa1356390:intron | 50.0% |
| ACTAGGGGTGGACGCAATAA+AGG | + | tig0015628:17885-17904 | None:intergenic | 50.0% | |
| CACCCCTAGTCACCTAATTG+CGG | - | tig0015628:17895-17914 | Msa1356390:intron | 50.0% | |
| TGCCGCAATTAGGTGACTAG+GGG | + | tig0015628:17900-17919 | None:intergenic | 50.0% | |
| ! | GGTGTTGGAGACTGCAATGA+AGG | + | tig0015628:17932-17951 | None:intergenic | 50.0% |
| !!! | TTTTGTTGGCTTTGAGGGGG+TGG | - | tig0015628:17956-17975 | Msa1356390:intron | 50.0% |
| ! | GGGTGGATTTAGTCCCACAT+CGG | - | tig0015628:17973-17992 | Msa1356390:intron | 50.0% |
| CCCAATTCCCACTGTCAAAC+TGG | - | tig0015628:18076-18095 | Msa1356390:intron | 50.0% | |
| ! | CCCACTGTCAAACTGGTTTC+TGG | - | tig0015628:18083-18102 | Msa1356390:intron | 50.0% |
| !! | CCTTACGAAACCGGCTTGTA+AGG | + | tig0015628:18950-18969 | None:intergenic | 50.0% |
| ! | CCTTACAAGCCGGTTTCGTA+AGG | - | tig0015628:18947-18966 | Msa1356390:intron | 50.0% |
| CCCAATTCCCACTGTCAAAC+TGG | - | tig0015628:18076-18095 | Msa1356390:intron | 50.0% | |
| ! | CCCACTGTCAAACTGGTTTC+TGG | - | tig0015628:18083-18102 | Msa1356390:intron | 50.0% |
| TCACTCCTCACCTTACAAGC+CGG | - | tig0015628:19294-19313 | Msa1356390:intron | 50.0% | |
| !! | CCTTACGAAACCGGCTTGTA+AGG | + | tig0015628:18950-18969 | None:intergenic | 50.0% |
| ! | CCTTACAAGCCGGTTTCGTA+AGG | - | tig0015628:18947-18966 | Msa1356390:intron | 50.0% |
| CCCAATTCCCACTGTCAAAC+TGG | - | tig0015628:18076-18095 | Msa1356390:intron | 50.0% | |
| ! | CCCACTGTCAAACTGGTTTC+TGG | - | tig0015628:18083-18102 | Msa1356390:intron | 50.0% |
| AGTGGGATTATGCTGAGGGT+GGG | + | tig0015628:20152-20171 | None:intergenic | 50.0% | |
| GCAAGAGTGGGATTATGCTG+AGG | + | tig0015628:20157-20176 | None:intergenic | 50.0% | |
| GGTGAACTCAATGAAGAGGC+CGG | - | tig0015628:21485-21504 | Msa1356390:CDS | 50.0% | |
| TAGCTCACCACATCTCGTAC+CGG | + | tig0015628:21507-21526 | None:intergenic | 50.0% | |
| GAGCAACATGTGAGAGAGGC+GGG | + | tig0015628:13510-13529 | None:intergenic | 55.0% | |
| TGATGAGTAGTGTGAGCGGG+AGG | + | tig0015628:14367-14386 | None:intergenic | 55.0% | |
| AAGGTTCAAGCAAGGCGTGG+AGG | - | tig0015628:14481-14500 | Msa1356390:intron | 55.0% | |
| ATGTTGGGGATGCGATCTGC+GGG | + | tig0015628:14634-14653 | None:intergenic | 55.0% | |
| GGGCATGTAGAGGAGAAACC+TGG | - | tig0015628:15024-15043 | Msa1356390:intron | 55.0% | |
| CAGGACAGGACATCTATGGG+AGG | + | tig0015628:16232-16251 | None:intergenic | 55.0% | |
| GAGCGCAAAGTTTGCAGGAC+AGG | + | tig0015628:16246-16265 | None:intergenic | 55.0% | |
| CGCCGTTTGATCCAAGTAGC+CGG | + | tig0015628:16468-16487 | None:intergenic | 55.0% | |
| !! | GTGGTGGTAGTGGGTAAGGT+AGG | - | tig0015628:16700-16719 | Msa1356390:intron | 55.0% |
| GCACGGTCTGTCCATGTCTT+TGG | + | tig0015628:16808-16827 | None:intergenic | 55.0% | |
| CAAAGCCTCTCTGCAAACGG+TGG | + | tig0015628:17417-17436 | None:intergenic | 55.0% | |
| CCGTTTGCAGAGAGGCTTTG+TGG | - | tig0015628:17417-17436 | Msa1356390:intron | 55.0% | |
| ACAGTCCAGTGCTCTTCCTC+TGG | + | tig0015628:17530-17549 | None:intergenic | 55.0% | |
| GAAGTGCAGTCAGTCCCATC+TGG | - | tig0015628:17737-17756 | Msa1356390:intron | 55.0% | |
| !! | AGAAATGGGCTGTCGAGCAG+GGG | - | tig0015628:17796-17815 | Msa1356390:intron | 55.0% |
| CCAAAAGGGGTGGTCTGTCA+TGG | + | tig0015628:17838-17857 | None:intergenic | 55.0% | |
| ! | CCATGACAGACCACCCCTTT+TGG | - | tig0015628:17835-17854 | Msa1356390:intron | 55.0% |
| AGGGGTGGACGCAATAAAGG+CGG | + | tig0015628:17882-17901 | None:intergenic | 55.0% | |
| CGCAATTAGGTGACTAGGGG+TGG | + | tig0015628:17897-17916 | None:intergenic | 55.0% | |
| GCACTCCTCACCTTACAAGC+CGG | - | tig0015628:18937-18956 | Msa1356390:intron | 55.0% | |
| !! | CGAAACCGGCTTGTAAGGTG+AGG | + | tig0015628:18945-18964 | None:intergenic | 55.0% |
| !! | CGAAACCGGCTTGTAAGGTG+AGG | + | tig0015628:18945-18964 | None:intergenic | 55.0% |
| GAGATGAGCCGCTGAATGAG+AGG | - | tig0015628:20004-20023 | Msa1356390:intron | 55.0% | |
| GAGTGGGATTATGCTGAGGG+TGG | + | tig0015628:20153-20172 | None:intergenic | 55.0% | |
| GAGATGTGGTGAGCTACCCT+AGG | - | tig0015628:21511-21530 | Msa1356390:CDS | 55.0% | |
| ! | ACAAATGGGTGTGTCGGCCG+AGG | - | tig0015628:14027-14046 | Msa1356390:intron | 60.0% |
| TGTTGGGGATGCGATCTGCG+GGG | + | tig0015628:14633-14652 | None:intergenic | 60.0% | |
| ACTAAGTGGGGTCGGCTGCA+TGG | + | tig0015628:15203-15222 | None:intergenic | 60.0% | |
| ATGCAGCCGACCCCACTTAG+TGG | - | tig0015628:15202-15221 | Msa1356390:intron | 60.0% | |
| TGCAGCCGACCCCACTTAGT+GGG | - | tig0015628:15203-15222 | Msa1356390:intron | 60.0% | |
| GCCCCCAAGCCTTACCAACT+AGG | - | tig0015628:16437-16456 | Msa1356390:intron | 60.0% | |
| GCAGGGGATCAGACCCAGAT+GGG | + | tig0015628:17754-17773 | None:intergenic | 60.0% | |
| GAAGAGGCCGGTACGAGATG+TGG | - | tig0015628:21497-21516 | Msa1356390:CDS | 60.0% | |
| !! | GAGAGACGGGAGGGTGTCAG+CGG | + | tig0015628:14308-14327 | None:intergenic | 65.0% |
| GGCAGGGGATCAGACCCAGA+TGG | + | tig0015628:17755-17774 | None:intergenic | 65.0% | |
| CGAGCAGGGGCAGGTTTCAC+AGG | - | tig0015628:17809-17828 | Msa1356390:intron | 65.0% | |
| GCAGGGGCAGGTTTCACAGG+AGG | - | tig0015628:17812-17831 | Msa1356390:intron | 65.0% | |
| !! | AGACGGGAGGGTGTCAGCGG+AGG | + | tig0015628:14305-14324 | None:intergenic | 70.0% |
| ! | ATGGGCTGTCGAGCAGGGGC+AGG | - | tig0015628:17800-17819 | Msa1356390:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0015628 | gene | 13503 | 21874 | 13503 | ID=Msa1356390;Name=Msa1356390 |
| tig0015628 | mRNA | 13503 | 21874 | 13503 | ID=Msa1356390-mRNA-1;Parent=Msa1356390;Name=Msa1356390-mRNA-1;_AED=0.02;_eAED=0.02;_QI=129|1|1|1|0.8|0.66|6|161|611 |
| tig0015628 | exon | 13503 | 14012 | 13503 | ID=Msa1356390-mRNA-1:exon:9911;Parent=Msa1356390-mRNA-1 |
| tig0015628 | exon | 14282 | 14499 | 14282 | ID=Msa1356390-mRNA-1:exon:9910;Parent=Msa1356390-mRNA-1 |
| tig0015628 | exon | 18393 | 18575 | 18393 | ID=Msa1356390-mRNA-1:exon:9909;Parent=Msa1356390-mRNA-1 |
| tig0015628 | exon | 19684 | 19797 | 19684 | ID=Msa1356390-mRNA-1:exon:9908;Parent=Msa1356390-mRNA-1 |
| tig0015628 | exon | 20651 | 21671 | 20651 | ID=Msa1356390-mRNA-1:exon:9907;Parent=Msa1356390-mRNA-1 |
| tig0015628 | exon | 21795 | 21874 | 21795 | ID=Msa1356390-mRNA-1:exon:9906;Parent=Msa1356390-mRNA-1 |
| tig0015628 | five_prime_UTR | 21795 | 21874 | 21795 | ID=Msa1356390-mRNA-1:five_prime_utr;Parent=Msa1356390-mRNA-1 |
| tig0015628 | five_prime_UTR | 21623 | 21671 | 21623 | ID=Msa1356390-mRNA-1:five_prime_utr;Parent=Msa1356390-mRNA-1 |
| tig0015628 | CDS | 20651 | 21622 | 20651 | ID=Msa1356390-mRNA-1:cds;Parent=Msa1356390-mRNA-1 |
| tig0015628 | CDS | 19684 | 19797 | 19684 | ID=Msa1356390-mRNA-1:cds;Parent=Msa1356390-mRNA-1 |
| tig0015628 | CDS | 18393 | 18575 | 18393 | ID=Msa1356390-mRNA-1:cds;Parent=Msa1356390-mRNA-1 |
| tig0015628 | CDS | 14282 | 14499 | 14282 | ID=Msa1356390-mRNA-1:cds;Parent=Msa1356390-mRNA-1 |
| tig0015628 | CDS | 13664 | 14012 | 13664 | ID=Msa1356390-mRNA-1:cds;Parent=Msa1356390-mRNA-1 |
| tig0015628 | three_prime_UTR | 13503 | 13663 | 13503 | ID=Msa1356390-mRNA-1:three_prime_utr;Parent=Msa1356390-mRNA-1 |
| Gene Sequence |
| Protein sequence |
