Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1444500 | sp|Q9LS48|SG1_ARATH | 31.250 | 192 | 109 | 5 | 73 | 251 | 54 | 235 | 1.57e-14 | 75.5 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1444500 | G7JAC0 | 86.517 | 267 | 23 | 2 | 1 | 267 | 1 | 254 | 5.83e-158 | 451 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0008250 | Msa1444500 | 0.822524 | 2.262286e-53 | -8.615850e-47 |
Msa0028050 | Msa1444500 | 0.806222 | 9.133381e-50 | -8.615850e-47 |
Msa0028950 | Msa1444500 | 0.835253 | 1.868862e-56 | -8.615850e-47 |
Msa0030400 | Msa1444500 | 0.872661 | 2.678575e-67 | -8.615850e-47 |
Msa0044250 | Msa1444500 | 0.839259 | 1.763364e-57 | -8.615850e-47 |
Msa0044320 | Msa1444500 | 0.842915 | 1.932098e-58 | -8.615850e-47 |
Msa0045660 | Msa1444500 | 0.843583 | 1.281224e-58 | -8.615850e-47 |
Msa0046090 | Msa1444500 | 0.802166 | 6.383094e-49 | -8.615850e-47 |
Msa0049990 | Msa1444500 | 0.806935 | 6.458787e-50 | -8.615850e-47 |
Msa0051600 | Msa1444500 | 0.810728 | 9.977315e-51 | -8.615850e-47 |
Msa0070740 | Msa1444500 | 0.809885 | 1.516461e-50 | -8.615850e-47 |
Msa0072710 | Msa1444500 | 0.826018 | 3.413977e-54 | -8.615850e-47 |
Msa0072910 | Msa1444500 | 0.810284 | 1.244312e-50 | -8.615850e-47 |
Msa0073350 | Msa1444500 | 0.828523 | 8.574356e-55 | -8.615850e-47 |
Msa0079550 | Msa1444500 | 0.802871 | 4.566360e-49 | -8.615850e-47 |
Msa0087040 | Msa1444500 | 0.811023 | 8.614928e-51 | -8.615850e-47 |
Msa0090760 | Msa1444500 | 0.842479 | 2.521516e-58 | -8.615850e-47 |
Msa0092390 | Msa1444500 | 0.831678 | 1.456809e-55 | -8.615850e-47 |
Msa0094700 | Msa1444500 | 0.853369 | 2.501578e-61 | -8.615850e-47 |
Msa0094990 | Msa1444500 | 0.840407 | 8.858660e-58 | -8.615850e-47 |
Msa0113910 | Msa1444500 | 0.800113 | 1.678569e-48 | -8.615850e-47 |
Msa0115410 | Msa1444500 | 0.822673 | 2.088477e-53 | -8.615850e-47 |
Msa0115950 | Msa1444500 | 0.818456 | 1.941856e-52 | -8.615850e-47 |
Msa1344940 | Msa1444500 | 0.830272 | 3.223923e-55 | -8.615850e-47 |
Msa1351370 | Msa1444500 | 0.836953 | 6.915678e-57 | -8.615850e-47 |
Msa1353270 | Msa1444500 | 0.820373 | 7.099051e-53 | -8.615850e-47 |
Msa1356390 | Msa1444500 | 0.801893 | 7.261060e-49 | -8.615850e-47 |
Msa1356680 | Msa1444500 | 0.802264 | 6.092821e-49 | -8.615850e-47 |
Msa1357090 | Msa1444500 | 0.804966 | 1.675787e-49 | -8.615850e-47 |
Msa1368800 | Msa1444500 | 0.820297 | 7.390388e-53 | -8.615850e-47 |
Msa1369900 | Msa1444500 | 0.821147 | 4.712429e-53 | -8.615850e-47 |
Msa1371840 | Msa1444500 | 0.841635 | 4.216005e-58 | -8.615850e-47 |
Msa1386020 | Msa1444500 | 0.808400 | 3.154805e-50 | -8.615850e-47 |
Msa1387650 | Msa1444500 | 0.822665 | 2.097659e-53 | -8.615850e-47 |
Msa1391600 | Msa1444500 | 0.815772 | 7.790683e-52 | -8.615850e-47 |
Msa1393010 | Msa1444500 | 0.801867 | 7.353353e-49 | -8.615850e-47 |
Msa1393720 | Msa1444500 | 0.822479 | 2.317865e-53 | -8.615850e-47 |
Msa1411820 | Msa1444500 | 0.816755 | 4.696779e-52 | -8.615850e-47 |
Msa1412830 | Msa1444500 | 0.813735 | 2.202376e-51 | -8.615850e-47 |
Msa1415250 | Msa1444500 | 0.825409 | 4.762116e-54 | -8.615850e-47 |
Msa1422900 | Msa1444500 | 0.845827 | 3.186004e-59 | -8.615850e-47 |
Msa1428050 | Msa1444500 | 0.827246 | 1.739436e-54 | -8.615850e-47 |
Msa1432350 | Msa1444500 | 0.823052 | 1.704877e-53 | -8.615850e-47 |
Msa1437650 | Msa1444500 | 0.851329 | 9.529716e-61 | -8.615850e-47 |
Msa1444500 | Msa1449510 | 0.836583 | 8.595965e-57 | -8.615850e-47 |
Msa1444500 | Msa1451480 | 0.800223 | 1.594044e-48 | -8.615850e-47 |
Msa1444500 | Msa1456170 | 0.815912 | 7.247716e-52 | -8.615850e-47 |
Msa0607440 | Msa1444500 | 0.850016 | 2.229536e-60 | -8.615850e-47 |
Msa0610300 | Msa1444500 | 0.848320 | 6.605372e-60 | -8.615850e-47 |
Msa0618260 | Msa1444500 | 0.816530 | 5.273183e-52 | -8.615850e-47 |
Msa0618490 | Msa1444500 | 0.802864 | 4.582931e-49 | -8.615850e-47 |
Msa0619170 | Msa1444500 | 0.807827 | 4.179307e-50 | -8.615850e-47 |
Msa0619460 | Msa1444500 | 0.814682 | 1.360426e-51 | -8.615850e-47 |
Msa0619520 | Msa1444500 | 0.823127 | 1.637412e-53 | -8.615850e-47 |
Msa0621870 | Msa1444500 | 0.808339 | 3.250692e-50 | -8.615850e-47 |
Msa0622690 | Msa1444500 | 0.845712 | 3.422701e-59 | -8.615850e-47 |
Msa0625310 | Msa1444500 | 0.843868 | 1.075495e-58 | -8.615850e-47 |
Msa0625440 | Msa1444500 | 0.808026 | 3.790294e-50 | -8.615850e-47 |
Msa0629500 | Msa1444500 | 0.806386 | 8.438177e-50 | -8.615850e-47 |
Msa0629820 | Msa1444500 | 0.810702 | 1.010783e-50 | -8.615850e-47 |
Msa0629980 | Msa1444500 | 0.805935 | 1.049803e-49 | -8.615850e-47 |
Msa0638500 | Msa1444500 | 0.803863 | 2.845086e-49 | -8.615850e-47 |
Msa0639880 | Msa1444500 | 0.817006 | 4.123551e-52 | -8.615850e-47 |
Msa0645780 | Msa1444500 | 0.800281 | 1.551401e-48 | -8.615850e-47 |
Msa0647710 | Msa1444500 | 0.805179 | 1.512379e-49 | -8.615850e-47 |
Msa0650360 | Msa1444500 | 0.820008 | 8.605310e-53 | -8.615850e-47 |
Msa0652220 | Msa1444500 | 0.804008 | 2.654507e-49 | -8.615850e-47 |
Msa0657820 | Msa1444500 | 0.816247 | 6.100770e-52 | -8.615850e-47 |
Msa0658280 | Msa1444500 | 0.800098 | 1.689994e-48 | -8.615850e-47 |
Msa0659590 | Msa1444500 | 0.820167 | 7.914550e-53 | -8.615850e-47 |
Msa0662670 | Msa1444500 | 0.821473 | 3.962525e-53 | -8.615850e-47 |
Msa0668160 | Msa1444500 | 0.819130 | 1.365044e-52 | -8.615850e-47 |
Msa0677840 | Msa1444500 | 0.843464 | 1.378594e-58 | -8.615850e-47 |
Msa0688760 | Msa1444500 | 0.822417 | 2.395224e-53 | -8.615850e-47 |
Msa0690530 | Msa1444500 | 0.811256 | 7.668697e-51 | -8.615850e-47 |
Msa0692710 | Msa1444500 | 0.843822 | 1.106428e-58 | -8.615850e-47 |
Msa0697180 | Msa1444500 | 0.803781 | 2.958720e-49 | -8.615850e-47 |
Msa0703620 | Msa1444500 | 0.816157 | 6.391941e-52 | -8.615850e-47 |
Msa0705670 | Msa1444500 | 0.814315 | 1.640274e-51 | -8.615850e-47 |
Msa0708870 | Msa1444500 | 0.819483 | 1.134062e-52 | -8.615850e-47 |
Msa0710950 | Msa1444500 | 0.813102 | 3.034093e-51 | -8.615850e-47 |
Msa0712100 | Msa1444500 | 0.830528 | 2.790953e-55 | -8.615850e-47 |
Msa0726000 | Msa1444500 | 0.817787 | 2.751149e-52 | -8.615850e-47 |
Msa0749900 | Msa1444500 | 0.849261 | 3.622395e-60 | -8.615850e-47 |
Msa0752540 | Msa1444500 | 0.813705 | 2.236024e-51 | -8.615850e-47 |
Msa0760950 | Msa1444500 | 0.820557 | 6.442026e-53 | -8.615850e-47 |
Msa0761930 | Msa1444500 | 0.808739 | 2.671251e-50 | -8.615850e-47 |
Msa0766540 | Msa1444500 | 0.820705 | 5.955335e-53 | -8.615850e-47 |
Msa0770430 | Msa1444500 | 0.804409 | 2.190048e-49 | -8.615850e-47 |
Msa0789800 | Msa1444500 | 0.806744 | 7.089695e-50 | -8.615850e-47 |
Msa0791170 | Msa1444500 | 0.807255 | 5.527702e-50 | -8.615850e-47 |
Msa0803220 | Msa1444500 | 0.805807 | 1.117117e-49 | -8.615850e-47 |
Msa0814780 | Msa1444500 | 0.824617 | 7.324358e-54 | -8.615850e-47 |
Msa0824140 | Msa1444500 | 0.801125 | 1.043671e-48 | -8.615850e-47 |
Msa0829110 | Msa1444500 | 0.849243 | 3.663575e-60 | -8.615850e-47 |
Msa0829430 | Msa1444500 | 0.845623 | 3.617954e-59 | -8.615850e-47 |
Msa0829570 | Msa1444500 | 0.802085 | 6.631572e-49 | -8.615850e-47 |
Msa0830120 | Msa1444500 | 0.844173 | 8.906183e-59 | -8.615850e-47 |
Msa0830450 | Msa1444500 | 0.844324 | 8.114456e-59 | -8.615850e-47 |
Msa0830830 | Msa1444500 | 0.808959 | 2.397150e-50 | -8.615850e-47 |
Msa0840630 | Msa1444500 | 0.814594 | 1.422764e-51 | -8.615850e-47 |
Msa0121080 | Msa1444500 | 0.836157 | 1.102983e-56 | -8.615850e-47 |
Msa0127060 | Msa1444500 | 0.823670 | 1.222495e-53 | -8.615850e-47 |
Msa0130340 | Msa1444500 | 0.814662 | 1.374645e-51 | -8.615850e-47 |
Msa0131390 | Msa1444500 | 0.819670 | 1.028082e-52 | -8.615850e-47 |
Msa0135400 | Msa1444500 | 0.805809 | 1.115825e-49 | -8.615850e-47 |
Msa0164630 | Msa1444500 | 0.818812 | 1.611905e-52 | -8.615850e-47 |
Msa0168900 | Msa1444500 | 0.800833 | 1.197039e-48 | -8.615850e-47 |
Msa0168960 | Msa1444500 | 0.831604 | 1.519579e-55 | -8.615850e-47 |
Msa0171930 | Msa1444500 | 0.809642 | 1.710513e-50 | -8.615850e-47 |
Msa0173760 | Msa1444500 | 0.856924 | 2.314957e-62 | -8.615850e-47 |
Msa0173850 | Msa1444500 | 0.872275 | 3.603799e-67 | -8.615850e-47 |
Msa0177490 | Msa1444500 | 0.823383 | 1.426845e-53 | -8.615850e-47 |
Msa0179200 | Msa1444500 | 0.823062 | 1.695482e-53 | -8.615850e-47 |
Msa0181380 | Msa1444500 | 0.828339 | 9.496234e-55 | -8.615850e-47 |
Msa0206940 | Msa1444500 | 0.806322 | 8.700484e-50 | -8.615850e-47 |
Msa0217300 | Msa1444500 | 0.812586 | 3.934475e-51 | -8.615850e-47 |
Msa0219550 | Msa1444500 | 0.802934 | 4.432059e-49 | -8.615850e-47 |
Msa0225030 | Msa1444500 | 0.800501 | 1.399079e-48 | -8.615850e-47 |
Msa0235180 | Msa1444500 | 0.837178 | 6.057055e-57 | -8.615850e-47 |
Msa1228880 | Msa1444500 | 0.832653 | 8.360430e-56 | -8.615850e-47 |
Msa1233770 | Msa1444500 | 0.801499 | 8.747462e-49 | -8.615850e-47 |
Msa1243860 | Msa1444500 | 0.806024 | 1.005687e-49 | -8.615850e-47 |
Msa1254990 | Msa1444500 | 0.863062 | 3.254529e-64 | -8.615850e-47 |
Msa1257520 | Msa1444500 | 0.831846 | 1.324558e-55 | -8.615850e-47 |
Msa1258770 | Msa1444500 | 0.828373 | 9.320827e-55 | -8.615850e-47 |
Msa1263460 | Msa1444500 | 0.822141 | 2.776282e-53 | -8.615850e-47 |
Msa1265870 | Msa1444500 | 0.800773 | 1.231327e-48 | -8.615850e-47 |
Msa1265990 | Msa1444500 | 0.812588 | 3.930733e-51 | -8.615850e-47 |
Msa1267330 | Msa1444500 | 0.813949 | 1.975604e-51 | -8.615850e-47 |
Msa1267390 | Msa1444500 | 0.827063 | 1.924374e-54 | -8.615850e-47 |
Msa1269370 | Msa1444500 | 0.821687 | 3.536948e-53 | -8.615850e-47 |
Msa1293060 | Msa1444500 | 0.855461 | 6.210926e-62 | -8.615850e-47 |
Msa1297720 | Msa1444500 | 0.802106 | 6.567414e-49 | -8.615850e-47 |
Msa1302750 | Msa1444500 | 0.818736 | 1.677943e-52 | -8.615850e-47 |
Msa1303030 | Msa1444500 | 0.803482 | 3.413939e-49 | -8.615850e-47 |
Msa1322660 | Msa1444500 | 0.811363 | 7.268244e-51 | -8.615850e-47 |
Msa1326000 | Msa1444500 | 0.807547 | 4.791301e-50 | -8.615850e-47 |
Msa1326800 | Msa1444500 | 0.858868 | 6.130501e-63 | -8.615850e-47 |
Msa1329290 | Msa1444500 | 0.806634 | 7.478701e-50 | -8.615850e-47 |
Msa1330280 | Msa1444500 | 0.818729 | 1.683523e-52 | -8.615850e-47 |
Msa1339520 | Msa1444500 | 0.813045 | 3.121657e-51 | -8.615850e-47 |
Msa0365110 | Msa1444500 | 0.822147 | 2.767507e-53 | -8.615850e-47 |
Msa0367310 | Msa1444500 | 0.806941 | 6.441703e-50 | -8.615850e-47 |
Msa0379390 | Msa1444500 | 0.806875 | 6.652564e-50 | -8.615850e-47 |
Msa0383110 | Msa1444500 | 0.819473 | 1.140458e-52 | -8.615850e-47 |
Msa0387120 | Msa1444500 | 0.814418 | 1.556552e-51 | -8.615850e-47 |
Msa0397000 | Msa1444500 | 0.806357 | 8.554449e-50 | -8.615850e-47 |
Msa0409000 | Msa1444500 | 0.809748 | 1.623358e-50 | -8.615850e-47 |
Msa0423590 | Msa1444500 | 0.802275 | 6.059836e-49 | -8.615850e-47 |
Msa0425800 | Msa1444500 | 0.802208 | 6.256783e-49 | -8.615850e-47 |
Msa0426480 | Msa1444500 | 0.808050 | 3.746085e-50 | -8.615850e-47 |
Msa0427090 | Msa1444500 | 0.934516 | 3.578221e-96 | -8.615850e-47 |
Msa0427750 | Msa1444500 | 0.855156 | 7.619075e-62 | -8.615850e-47 |
Msa0427960 | Msa1444500 | 0.823553 | 1.301730e-53 | -8.615850e-47 |
Msa0438440 | Msa1444500 | 0.863097 | 3.173844e-64 | -8.615850e-47 |
Msa0444310 | Msa1444500 | 0.804987 | 1.659341e-49 | -8.615850e-47 |
Msa0455200 | Msa1444500 | 0.803832 | 2.888272e-49 | -8.615850e-47 |
Msa0456940 | Msa1444500 | 0.823539 | 1.311484e-53 | -8.615850e-47 |
Msa0471080 | Msa1444500 | 0.806828 | 6.804425e-50 | -8.615850e-47 |
Msa0471890 | Msa1444500 | 0.800858 | 1.183294e-48 | -8.615850e-47 |
Msa0472260 | Msa1444500 | 0.818549 | 1.849620e-52 | -8.615850e-47 |
Msa0472560 | Msa1444500 | 0.815947 | 7.119836e-52 | -8.615850e-47 |
Msa0473010 | Msa1444500 | 0.819020 | 1.445712e-52 | -8.615850e-47 |
Msa0473490 | Msa1444500 | 0.855040 | 8.237161e-62 | -8.615850e-47 |
Msa0475740 | Msa1444500 | 0.819157 | 1.346071e-52 | -8.615850e-47 |
Msa0476180 | Msa1444500 | 0.802393 | 5.731194e-49 | -8.615850e-47 |
Msa0476820 | Msa1444500 | 0.847114 | 1.419502e-59 | -8.615850e-47 |
Msa1011240 | Msa1444500 | 0.836885 | 7.198844e-57 | -8.615850e-47 |
Msa1026880 | Msa1444500 | 0.800328 | 1.517425e-48 | -8.615850e-47 |
Msa1031650 | Msa1444500 | 0.821034 | 5.002420e-53 | -8.615850e-47 |
Msa1035790 | Msa1444500 | 0.820945 | 5.245783e-53 | -8.615850e-47 |
Msa1038230 | Msa1444500 | 0.803996 | 2.669731e-49 | -8.615850e-47 |
Msa1054890 | Msa1444500 | 0.839388 | 1.633023e-57 | -8.615850e-47 |
Msa1055490 | Msa1444500 | 0.800785 | 1.224528e-48 | -8.615850e-47 |
Msa1067430 | Msa1444500 | 0.822670 | 2.092004e-53 | -8.615850e-47 |
Msa1081700 | Msa1444500 | 0.821317 | 4.306060e-53 | -8.615850e-47 |
Msa1083460 | Msa1444500 | 0.821195 | 4.594187e-53 | -8.615850e-47 |
Msa1084210 | Msa1444500 | 0.805932 | 1.051361e-49 | -8.615850e-47 |
Msa1092430 | Msa1444500 | 0.844138 | 9.100030e-59 | -8.615850e-47 |
Msa1096280 | Msa1444500 | 0.832742 | 7.947671e-56 | -8.615850e-47 |
Msa0241580 | Msa1444500 | 0.814975 | 1.171360e-51 | -8.615850e-47 |
Msa0251140 | Msa1444500 | 0.809511 | 1.824679e-50 | -8.615850e-47 |
Msa0258380 | Msa1444500 | 0.873983 | 9.631340e-68 | -8.615850e-47 |
Msa0258410 | Msa1444500 | 0.869521 | 2.909317e-66 | -8.615850e-47 |
Msa0265440 | Msa1444500 | 0.820524 | 6.554543e-53 | -8.615850e-47 |
Msa0266010 | Msa1444500 | 0.854533 | 1.155569e-61 | -8.615850e-47 |
Msa0269430 | Msa1444500 | 0.805314 | 1.417248e-49 | -8.615850e-47 |
Msa0269830 | Msa1444500 | 0.804149 | 2.481646e-49 | -8.615850e-47 |
Msa0270840 | Msa1444500 | 0.800459 | 1.427410e-48 | -8.615850e-47 |
Msa0272420 | Msa1444500 | 0.806140 | 9.503936e-50 | -8.615850e-47 |
Msa0274870 | Msa1444500 | 0.810737 | 9.931907e-51 | -8.615850e-47 |
Msa0274890 | Msa1444500 | 0.846215 | 2.498285e-59 | -8.615850e-47 |
Msa0279490 | Msa1444500 | 0.820721 | 5.906461e-53 | -8.615850e-47 |
Msa0279910 | Msa1444500 | 0.816576 | 5.149792e-52 | -8.615850e-47 |
Msa0281310 | Msa1444500 | 0.821770 | 3.383278e-53 | -8.615850e-47 |
Msa0282070 | Msa1444500 | 0.828962 | 6.714006e-55 | -8.615850e-47 |
Msa0282090 | Msa1444500 | 0.834128 | 3.585283e-56 | -8.615850e-47 |
Msa0288360 | Msa1444500 | 0.809704 | 1.658703e-50 | -8.615850e-47 |
Msa0303950 | Msa1444500 | 0.851170 | 1.056790e-60 | -8.615850e-47 |
Msa0304020 | Msa1444500 | 0.851030 | 1.157000e-60 | -8.615850e-47 |
Msa0305810 | Msa1444500 | 0.811205 | 7.867192e-51 | -8.615850e-47 |
Msa0309670 | Msa1444500 | 0.810965 | 8.864879e-51 | -8.615850e-47 |
Msa0312780 | Msa1444500 | 0.804963 | 1.678441e-49 | -8.615850e-47 |
Msa0313800 | Msa1444500 | 0.853866 | 1.799629e-61 | -8.615850e-47 |
Msa0315010 | Msa1444500 | 0.832876 | 7.360807e-56 | -8.615850e-47 |
Msa0319090 | Msa1444500 | 0.822774 | 1.978906e-53 | -8.615850e-47 |
Msa0321100 | Msa1444500 | 0.800414 | 1.457249e-48 | -8.615850e-47 |
Msa0323790 | Msa1444500 | 0.825797 | 3.853458e-54 | -8.615850e-47 |
Msa0327900 | Msa1444500 | 0.842116 | 3.147473e-58 | -8.615850e-47 |
Msa0335740 | Msa1444500 | 0.846535 | 2.043971e-59 | -8.615850e-47 |
Msa0340440 | Msa1444500 | 0.815239 | 1.023497e-51 | -8.615850e-47 |
Msa0341710 | Msa1444500 | 0.807338 | 5.307175e-50 | -8.615850e-47 |
Msa0347060 | Msa1444500 | 0.808335 | 3.257330e-50 | -8.615850e-47 |
Msa0350020 | Msa1444500 | 0.805374 | 1.376990e-49 | -8.615850e-47 |
Msa0352200 | Msa1444500 | 0.841299 | 5.169673e-58 | -8.615850e-47 |
Msa0361500 | Msa1444500 | 0.807732 | 4.378949e-50 | -8.615850e-47 |
Msa0362840 | Msa1444500 | 0.808349 | 3.235645e-50 | -8.615850e-47 |
Msa1117280 | Msa1444500 | 0.811115 | 8.225743e-51 | -8.615850e-47 |
Msa1118870 | Msa1444500 | 0.810302 | 1.233453e-50 | -8.615850e-47 |
Msa1126170 | Msa1444500 | 0.830608 | 2.668242e-55 | -8.615850e-47 |
Msa1128230 | Msa1444500 | 0.821597 | 3.709417e-53 | -8.615850e-47 |
Msa1145370 | Msa1444500 | 0.834867 | 2.338493e-56 | -8.615850e-47 |
Msa1151970 | Msa1444500 | 0.811470 | 6.889168e-51 | -8.615850e-47 |
Msa1156210 | Msa1444500 | 0.809656 | 1.699139e-50 | -8.615850e-47 |
Msa1182480 | Msa1444500 | 0.812166 | 4.860968e-51 | -8.615850e-47 |
Msa1183850 | Msa1444500 | 0.822858 | 1.891749e-53 | -8.615850e-47 |
Msa1184640 | Msa1444500 | 0.808778 | 2.620454e-50 | -8.615850e-47 |
Msa1188210 | Msa1444500 | 0.804054 | 2.596698e-49 | -8.615850e-47 |
Msa1193680 | Msa1444500 | 0.808177 | 3.520949e-50 | -8.615850e-47 |
Msa1198870 | Msa1444500 | 0.848972 | 4.359083e-60 | -8.615850e-47 |
Msa1207280 | Msa1444500 | 0.834713 | 2.556887e-56 | -8.615850e-47 |
Msa1220260 | Msa1444500 | 0.810335 | 1.212949e-50 | -8.615850e-47 |
Msa1223600 | Msa1444500 | 0.840714 | 7.360512e-58 | -8.615850e-47 |
Msa0485350 | Msa1444500 | 0.801267 | 9.759962e-49 | -8.615850e-47 |
Msa0498320 | Msa1444500 | 0.806590 | 7.641863e-50 | -8.615850e-47 |
Msa0512430 | Msa1444500 | 0.800856 | 1.184195e-48 | -8.615850e-47 |
Msa0516330 | Msa1444500 | 0.829330 | 5.467189e-55 | -8.615850e-47 |
Msa0517190 | Msa1444500 | 0.817024 | 4.087198e-52 | -8.615850e-47 |
Msa0518580 | Msa1444500 | 0.846688 | 1.855661e-59 | -8.615850e-47 |
Msa0521190 | Msa1444500 | 0.820891 | 5.398541e-53 | -8.615850e-47 |
Msa0524510 | Msa1444500 | 0.822384 | 2.438026e-53 | -8.615850e-47 |
Msa0524570 | Msa1444500 | 0.829046 | 6.407255e-55 | -8.615850e-47 |
Msa0528170 | Msa1444500 | 0.824063 | 9.885185e-54 | -8.615850e-47 |
Msa0528740 | Msa1444500 | 0.816546 | 5.230373e-52 | -8.615850e-47 |
Msa0528830 | Msa1444500 | 0.803285 | 3.749985e-49 | -8.615850e-47 |
Msa0533270 | Msa1444500 | 0.809374 | 1.952918e-50 | -8.615850e-47 |
Msa0553350 | Msa1444500 | 0.816488 | 5.389076e-52 | -8.615850e-47 |
Msa0557770 | Msa1444500 | 0.816009 | 6.895246e-52 | -8.615850e-47 |
Msa0559890 | Msa1444500 | 0.827774 | 1.299433e-54 | -8.615850e-47 |
Msa0562680 | Msa1444500 | 0.816269 | 6.032789e-52 | -8.615850e-47 |
Msa0565530 | Msa1444500 | 0.810355 | 1.201258e-50 | -8.615850e-47 |
Msa0569290 | Msa1444500 | 0.811806 | 5.822520e-51 | -8.615850e-47 |
Msa0573970 | Msa1444500 | 0.826882 | 2.125771e-54 | -8.615850e-47 |
Msa0576550 | Msa1444500 | 0.809262 | 2.063747e-50 | -8.615850e-47 |
Msa0576640 | Msa1444500 | 0.811488 | 6.829427e-51 | -8.615850e-47 |
Msa0589290 | Msa1444500 | 0.801542 | 8.574253e-49 | -8.615850e-47 |
Msa0589600 | Msa1444500 | 0.809299 | 2.026585e-50 | -8.615850e-47 |
Msa0599250 | Msa1444500 | 0.825890 | 3.663236e-54 | -8.615850e-47 |
Msa0846180 | Msa1444500 | 0.820906 | 5.353652e-53 | -8.615850e-47 |
Msa0863250 | Msa1444500 | 0.806509 | 7.946500e-50 | -8.615850e-47 |
Msa0875130 | Msa1444500 | 0.822356 | 2.475076e-53 | -8.615850e-47 |
Msa0879820 | Msa1444500 | 0.812847 | 3.451037e-51 | -8.615850e-47 |
Msa0881050 | Msa1444500 | 0.801527 | 8.631739e-49 | -8.615850e-47 |
Msa0901140 | Msa1444500 | 0.848269 | 6.826145e-60 | -8.615850e-47 |
Msa0902810 | Msa1444500 | 0.830253 | 3.258717e-55 | -8.615850e-47 |
Msa0926090 | Msa1444500 | 0.819224 | 1.299084e-52 | -8.615850e-47 |
Msa0931730 | Msa1444500 | 0.800090 | 1.696634e-48 | -8.615850e-47 |
Msa0933220 | Msa1444500 | 0.809580 | 1.764105e-50 | -8.615850e-47 |
Msa0968010 | Msa1444500 | 0.836068 | 1.162062e-56 | -8.615850e-47 |
Msa0968450 | Msa1444500 | 0.830989 | 2.151622e-55 | -8.615850e-47 |
Msa0974570 | Msa1444500 | 0.803531 | 3.333967e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1444500 | MtrunA17_Chr3g0129351 | 86.517 | 267 | 23 | 2 | 1 | 267 | 1 | 254 | 1.12e-161 | 451 |
Msa1444500 | MtrunA17_Chr8g0375201 | 33.784 | 148 | 88 | 2 | 115 | 262 | 107 | 244 | 6.45e-18 | 81.6 |
Msa1444500 | MtrunA17_Chr7g0263181 | 26.354 | 277 | 158 | 8 | 20 | 268 | 45 | 303 | 9.48e-15 | 73.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1444500 | AT4G39470.1 | 46.667 | 195 | 88 | 3 | 62 | 251 | 66 | 249 | 5.02e-48 | 162 |
Msa1444500 | AT3G18420.1 | 31.250 | 192 | 109 | 5 | 73 | 251 | 54 | 235 | 1.60e-15 | 75.5 |
Find 55 sgRNAs with CRISPR-Local
Find 248 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGGATTGTATTTGGAAATTT+TGG | 0.111951 | tig0030733:-1505 | Msa1444500:CDS |
TGTTGATTCAGCTGAAATTT+TGG | 0.183578 | tig0030733:-1724 | Msa1444500:CDS |
TAAGGCTAAAGGATTGTATT+TGG | 0.219222 | tig0030733:-1514 | Msa1444500:CDS |
AACAAGTGCATAGTGATAAA+TGG | 0.231649 | tig0030733:+1898 | None:intergenic |
AAAATTGTGGAGGGTGTTAA+TGG | 0.334111 | tig0030733:+1867 | None:intergenic |
AGAAGGGAATTGGGGAGATA+TGG | 0.336995 | tig0030733:+1990 | None:intergenic |
TGCAGGGTGGTGATTGGAGG+AGG | 0.342248 | tig0030733:-82 | Msa1444500:intron |
TGGTTGTGTATGGGAAAATT+AGG | 0.344777 | tig0030733:-1653 | Msa1444500:CDS |
AGCCTCCACTCAACCTCATT+TGG | 0.359412 | tig0030733:+1576 | None:intergenic |
TTGCACAAATGTGTTGTAAC+AGG | 0.393647 | tig0030733:-218 | Msa1444500:intron |
TCGTGGCAAAAGAAGGGAAT+TGG | 0.399875 | tig0030733:+1980 | None:intergenic |
GTGCTTTGCAGGGTGGTGAT+TGG | 0.412479 | tig0030733:-88 | Msa1444500:intron |
CGTGGCAAAAGAAGGGAATT+GGG | 0.418032 | tig0030733:+1981 | None:intergenic |
ACAAGTGCATAGTGATAAAT+GGG | 0.468344 | tig0030733:+1899 | None:intergenic |
GCTCTTAAAGTGGTTGTGTA+TGG | 0.470707 | tig0030733:-1663 | Msa1444500:CDS |
CTTTGCAGGGTGGTGATTGG+AGG | 0.472237 | tig0030733:-85 | Msa1444500:intron |
TTACGGAGGAGAGAAATATA+AGG | 0.473332 | tig0030733:-248 | Msa1444500:CDS |
TACGAATTCGTGGCAAAAGA+AGG | 0.481369 | tig0030733:+1973 | None:intergenic |
GGTTGAAGTGAAATTGATAA+GGG | 0.483895 | tig0030733:+1939 | None:intergenic |
TTCAGCATTTCAAATACAGC+AGG | 0.497693 | tig0030733:+306 | None:intergenic |
GACAATGGGGTATTTGAGTA+AGG | 0.500527 | tig0030733:-1532 | Msa1444500:CDS |
CTCTTAAAGTGGTTGTGTAT+GGG | 0.502104 | tig0030733:-1662 | Msa1444500:CDS |
GCAGGGTGGTGATTGGAGGA+GGG | 0.506318 | tig0030733:-81 | Msa1444500:intron |
AAGCTGAGAAGTTTGTGAAG+AGG | 0.509773 | tig0030733:-1614 | Msa1444500:CDS |
TGGTTGAAGTGAAATTGATA+AGG | 0.510289 | tig0030733:+1938 | None:intergenic |
ATGAAGAGCTCTAACAAAAG+AGG | 0.525108 | tig0030733:+1474 | None:intergenic |
GGGTATTTGAGTAAGGCTAA+AGG | 0.536389 | tig0030733:-1525 | Msa1444500:CDS |
GCATTGTGTTATGAGACAAT+GGG | 0.536548 | tig0030733:-1546 | Msa1444500:CDS |
AAATGTTGAGGCTCTTAAAG+TGG | 0.543541 | tig0030733:-1673 | Msa1444500:CDS |
CATTAATGAAAACAAAGTTA+CGG | 0.546563 | tig0030733:-265 | Msa1444500:CDS |
GGTACTGAAACTGCAAAAGC+GGG | 0.549723 | tig0030733:+1750 | None:intergenic |
AAGTTGGTTAAAGTTGTTTG+AGG | 0.558821 | tig0030733:+1840 | None:intergenic |
GGAGGGTGTTAATGGAGTGC+GGG | 0.560063 | tig0030733:+1875 | None:intergenic |
TGCATTGTGTTATGAGACAA+TGG | 0.562265 | tig0030733:-1547 | Msa1444500:CDS |
GATTGATGAGGAACCAAATG+AGG | 0.565692 | tig0030733:-1589 | Msa1444500:CDS |
TGGAGGGTGTTAATGGAGTG+CGG | 0.568184 | tig0030733:+1874 | None:intergenic |
TTGTTGCAGATACGAATTCG+TGG | 0.574634 | tig0030733:+1963 | None:intergenic |
AGGAACCAAATGAGGTTGAG+TGG | 0.584513 | tig0030733:-1581 | Msa1444500:CDS |
ACGAATTCGTGGCAAAAGAA+GGG | 0.586466 | tig0030733:+1974 | None:intergenic |
AGGTACTGAAACTGCAAAAG+CGG | 0.602398 | tig0030733:+1749 | None:intergenic |
TGTGAAGAGGTTGATTGATG+AGG | 0.608344 | tig0030733:-1601 | Msa1444500:CDS |
TGTTTGAGGTGAGAAAATTG+TGG | 0.610889 | tig0030733:+1854 | None:intergenic |
GAAGGATTCAAGAAATGTTG+AGG | 0.622010 | tig0030733:-1685 | Msa1444500:CDS |
TGTATGGGAAAATTAGGAGA+GGG | 0.623027 | tig0030733:-1647 | Msa1444500:CDS |
ATTTCAGCTGAATCAACAGA+AGG | 0.625556 | tig0030733:+1729 | None:intergenic |
TGAGGTGAGAAAATTGTGGA+GGG | 0.628555 | tig0030733:+1858 | None:intergenic |
GTGTATGGGAAAATTAGGAG+AGG | 0.651978 | tig0030733:-1648 | Msa1444500:CDS |
GTGGCAAAAGAAGGGAATTG+GGG | 0.656867 | tig0030733:+1982 | None:intergenic |
TGTATTTGAAATGCTGAACA+AGG | 0.665874 | tig0030733:-301 | Msa1444500:CDS |
TTGAGGTGAGAAAATTGTGG+AGG | 0.671928 | tig0030733:+1857 | None:intergenic |
AACCAAATGAGGTTGAGTGG+AGG | 0.677766 | tig0030733:-1578 | Msa1444500:CDS |
TAATGAAAACAAAGTTACGG+AGG | 0.686188 | tig0030733:-262 | Msa1444500:CDS |
GAGATATGGTTTGAACTCTG+AGG | 0.695791 | tig0030733:+2004 | None:intergenic |
CTCTGAGGAGATGAAGAGAG+TGG | 0.713127 | tig0030733:+2019 | None:intergenic |
CATTGTGTTATGAGACAATG+GGG | 0.737873 | tig0030733:-1545 | Msa1444500:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TCAAATTTTGATTAGAAATT+TGG | - | tig0030733:786-805 | Msa1444500:intron | 15.0% |
!!! | TCAAATTTTGATTAGAAATT+TGG | - | tig0030733:786-805 | Msa1444500:intron | 15.0% |
!!! | AAAGTTTCATTTTTTCTCAT+TGG | - | tig0030733:309-328 | Msa1444500:CDS | 20.0% |
!!! | AAGTTTCATTTTTTCTCATT+GGG | - | tig0030733:310-329 | Msa1444500:CDS | 20.0% |
!!! | TATATCTGTTTTTGTTTTGA+TGG | - | tig0030733:682-701 | Msa1444500:intron | 20.0% |
!! | TTTGATTATGATTGAAAAGT+TGG | - | tig0030733:736-755 | Msa1444500:intron | 20.0% |
!!! | ATATGAATGCTTTTTTGTTT+AGG | - | tig0030733:759-778 | Msa1444500:intron | 20.0% |
!! | AATAAAGAGTTAAGAACTTA+GGG | + | tig0030733:1244-1263 | None:intergenic | 20.0% |
!! | AAATAAAGAGTTAAGAACTT+AGG | + | tig0030733:1245-1264 | None:intergenic | 20.0% |
!! | CAAAACAATATAAGCATAAT+AGG | + | tig0030733:1349-1368 | None:intergenic | 20.0% |
!! | TTTATGTGATGAATATTAGA+CGG | - | tig0030733:1418-1437 | Msa1444500:intron | 20.0% |
!!! | GTAATACATTACTATTTTGA+CGG | + | tig0030733:1659-1678 | None:intergenic | 20.0% |
!! | CATTAATGAAAACAAAGTTA+CGG | - | tig0030733:1851-1870 | Msa1444500:CDS | 20.0% |
!!! | AAAGTTTCATTTTTTCTCAT+TGG | - | tig0030733:309-328 | Msa1444500:CDS | 20.0% |
!!! | AAGTTTCATTTTTTCTCATT+GGG | - | tig0030733:310-329 | Msa1444500:CDS | 20.0% |
!!! | TATATCTGTTTTTGTTTTGA+TGG | - | tig0030733:682-701 | Msa1444500:intron | 20.0% |
!! | TTTGATTATGATTGAAAAGT+TGG | - | tig0030733:736-755 | Msa1444500:intron | 20.0% |
!!! | ATATGAATGCTTTTTTGTTT+AGG | - | tig0030733:759-778 | Msa1444500:intron | 20.0% |
!! | AATAAAGAGTTAAGAACTTA+GGG | + | tig0030733:1244-1263 | None:intergenic | 20.0% |
!! | AAATAAAGAGTTAAGAACTT+AGG | + | tig0030733:1245-1264 | None:intergenic | 20.0% |
!! | CAAAACAATATAAGCATAAT+AGG | + | tig0030733:1349-1368 | None:intergenic | 20.0% |
!! | TTTATGTGATGAATATTAGA+CGG | - | tig0030733:1418-1437 | Msa1444500:intron | 20.0% |
!!! | GTAATACATTACTATTTTGA+CGG | + | tig0030733:1659-1678 | None:intergenic | 20.0% |
!! | CATTAATGAAAACAAAGTTA+CGG | - | tig0030733:1851-1870 | Msa1444500:CDS | 20.0% |
!! | TTTTCGTCATTCATTCAAAA+TGG | - | tig0030733:59-78 | Msa1444500:CDS | 25.0% |
!! | AACTTTTTGTGAAATGAAGT+TGG | + | tig0030733:295-314 | None:intergenic | 25.0% |
!! | AGGATTGTATTTGGAAATTT+TGG | - | tig0030733:611-630 | Msa1444500:intron | 25.0% |
!!! | ATTTGGAAATTTTGGAGAAT+TGG | - | tig0030733:619-638 | Msa1444500:intron | 25.0% |
! | TTTGATGGAATTATGAATGT+TGG | - | tig0030733:697-716 | Msa1444500:intron | 25.0% |
!!! | ACATTGATAATTGTTGACTT+AGG | - | tig0030733:822-841 | Msa1444500:intron | 25.0% |
!!! | CATTGATAATTGTTGACTTA+GGG | - | tig0030733:823-842 | Msa1444500:intron | 25.0% |
!!! | TAGTTGTGAGAATGTTTTAA+AGG | - | tig0030733:878-897 | Msa1444500:intron | 25.0% |
!!! | AGTTGTGAGAATGTTTTAAA+GGG | - | tig0030733:879-898 | Msa1444500:intron | 25.0% |
!!! | TGTTTTTTCATAAGTTATCG+TGG | + | tig0030733:965-984 | None:intergenic | 25.0% |
! | ATGCAATCATATTTGCATAA+AGG | + | tig0030733:1191-1210 | None:intergenic | 25.0% |
!! | TAAAACCCATGTATGAATTT+TGG | - | tig0030733:1291-1310 | Msa1444500:intron | 25.0% |
! | AACATCCAAAATTCATACAT+GGG | + | tig0030733:1299-1318 | None:intergenic | 25.0% |
! | TCACATAAATTTACAATCAC+AGG | + | tig0030733:1407-1426 | None:intergenic | 25.0% |
!!! | ATAGCTGTTATTTTGACAAT+TGG | + | tig0030733:1460-1479 | None:intergenic | 25.0% |
! | AATTGTCAAAATAACAGCTA+TGG | - | tig0030733:1459-1478 | Msa1444500:intron | 25.0% |
! | AATCTGAATCCAAAGTAAAA+TGG | + | tig0030733:1556-1575 | None:intergenic | 25.0% |
!!! | CGTAACTTTGTTTTCATTAA+TGG | + | tig0030733:1853-1872 | None:intergenic | 25.0% |
!! | TAACATGAACAATGTCTTTT+TGG | - | tig0030733:1977-1996 | Msa1444500:CDS | 25.0% |
!!! | TGTCTTTTTGGAGAATTATT+TGG | - | tig0030733:1989-2008 | Msa1444500:CDS | 25.0% |
!! | TTTTCGTCATTCATTCAAAA+TGG | - | tig0030733:59-78 | Msa1444500:CDS | 25.0% |
!! | AACTTTTTGTGAAATGAAGT+TGG | + | tig0030733:295-314 | None:intergenic | 25.0% |
!! | AGGATTGTATTTGGAAATTT+TGG | - | tig0030733:611-630 | Msa1444500:intron | 25.0% |
!!! | ATTTGGAAATTTTGGAGAAT+TGG | - | tig0030733:619-638 | Msa1444500:intron | 25.0% |
! | TTTGATGGAATTATGAATGT+TGG | - | tig0030733:697-716 | Msa1444500:intron | 25.0% |
!!! | ACATTGATAATTGTTGACTT+AGG | - | tig0030733:822-841 | Msa1444500:intron | 25.0% |
!!! | CATTGATAATTGTTGACTTA+GGG | - | tig0030733:823-842 | Msa1444500:intron | 25.0% |
!!! | TAGTTGTGAGAATGTTTTAA+AGG | - | tig0030733:878-897 | Msa1444500:intron | 25.0% |
!!! | AGTTGTGAGAATGTTTTAAA+GGG | - | tig0030733:879-898 | Msa1444500:intron | 25.0% |
!!! | TGTTTTTTCATAAGTTATCG+TGG | + | tig0030733:965-984 | None:intergenic | 25.0% |
! | ATGCAATCATATTTGCATAA+AGG | + | tig0030733:1191-1210 | None:intergenic | 25.0% |
!! | TAAAACCCATGTATGAATTT+TGG | - | tig0030733:1291-1310 | Msa1444500:intron | 25.0% |
! | AACATCCAAAATTCATACAT+GGG | + | tig0030733:1299-1318 | None:intergenic | 25.0% |
! | TCACATAAATTTACAATCAC+AGG | + | tig0030733:1407-1426 | None:intergenic | 25.0% |
!!! | ATAGCTGTTATTTTGACAAT+TGG | + | tig0030733:1460-1479 | None:intergenic | 25.0% |
! | AATTGTCAAAATAACAGCTA+TGG | - | tig0030733:1459-1478 | Msa1444500:intron | 25.0% |
! | AATCTGAATCCAAAGTAAAA+TGG | + | tig0030733:1556-1575 | None:intergenic | 25.0% |
!!! | CGTAACTTTGTTTTCATTAA+TGG | + | tig0030733:1853-1872 | None:intergenic | 25.0% |
!! | TAACATGAACAATGTCTTTT+TGG | - | tig0030733:1977-1996 | Msa1444500:CDS | 25.0% |
!!! | TGTCTTTTTGGAGAATTATT+TGG | - | tig0030733:1989-2008 | Msa1444500:CDS | 25.0% |
GGTTGAAGTGAAATTGATAA+GGG | + | tig0030733:180-199 | None:intergenic | 30.0% | |
TGGTTGAAGTGAAATTGATA+AGG | + | tig0030733:181-200 | None:intergenic | 30.0% | |
ACAAGTGCATAGTGATAAAT+GGG | + | tig0030733:220-239 | None:intergenic | 30.0% | |
AACAAGTGCATAGTGATAAA+TGG | + | tig0030733:221-240 | None:intergenic | 30.0% | |
! | AAGTTGGTTAAAGTTGTTTG+AGG | + | tig0030733:279-298 | None:intergenic | 30.0% |
!!! | TGTTGATTCAGCTGAAATTT+TGG | - | tig0030733:392-411 | Msa1444500:intron | 30.0% |
!! | AATTTTGGAGGAGAAGATTT+TGG | - | tig0030733:407-426 | Msa1444500:intron | 30.0% |
TAAGGCTAAAGGATTGTATT+TGG | - | tig0030733:602-621 | Msa1444500:intron | 30.0% | |
AATATGATTGCATGTTGACA+TGG | - | tig0030733:1198-1217 | Msa1444500:intron | 30.0% | |
CAACATCCAAAATTCATACA+TGG | + | tig0030733:1300-1319 | None:intergenic | 30.0% | |
TTGAGCCTTAGTATGTATTT+CGG | - | tig0030733:1374-1393 | Msa1444500:intron | 30.0% | |
TTACTTTGGATTCAGATTGA+AGG | - | tig0030733:1558-1577 | Msa1444500:CDS | 30.0% | |
! | GGTAAATTGATTTCATGACA+TGG | + | tig0030733:1686-1705 | None:intergenic | 30.0% |
TGTCATGAAATCAATTTACC+AGG | - | tig0030733:1686-1705 | Msa1444500:CDS | 30.0% | |
! | TGTATTTGAAATGCTGAACA+AGG | - | tig0030733:1815-1834 | Msa1444500:CDS | 30.0% |
TAATGAAAACAAAGTTACGG+AGG | - | tig0030733:1854-1873 | Msa1444500:CDS | 30.0% | |
GGTTGAAGTGAAATTGATAA+GGG | + | tig0030733:180-199 | None:intergenic | 30.0% | |
TGGTTGAAGTGAAATTGATA+AGG | + | tig0030733:181-200 | None:intergenic | 30.0% | |
ACAAGTGCATAGTGATAAAT+GGG | + | tig0030733:220-239 | None:intergenic | 30.0% | |
AACAAGTGCATAGTGATAAA+TGG | + | tig0030733:221-240 | None:intergenic | 30.0% | |
! | AAGTTGGTTAAAGTTGTTTG+AGG | + | tig0030733:279-298 | None:intergenic | 30.0% |
!!! | TGTTGATTCAGCTGAAATTT+TGG | - | tig0030733:392-411 | Msa1444500:intron | 30.0% |
!! | AATTTTGGAGGAGAAGATTT+TGG | - | tig0030733:407-426 | Msa1444500:intron | 30.0% |
TAAGGCTAAAGGATTGTATT+TGG | - | tig0030733:602-621 | Msa1444500:intron | 30.0% | |
AATATGATTGCATGTTGACA+TGG | - | tig0030733:1198-1217 | Msa1444500:intron | 30.0% | |
CAACATCCAAAATTCATACA+TGG | + | tig0030733:1300-1319 | None:intergenic | 30.0% | |
TTGAGCCTTAGTATGTATTT+CGG | - | tig0030733:1374-1393 | Msa1444500:intron | 30.0% | |
TTACTTTGGATTCAGATTGA+AGG | - | tig0030733:1558-1577 | Msa1444500:CDS | 30.0% | |
! | GGTAAATTGATTTCATGACA+TGG | + | tig0030733:1686-1705 | None:intergenic | 30.0% |
TGTCATGAAATCAATTTACC+AGG | - | tig0030733:1686-1705 | Msa1444500:CDS | 30.0% | |
! | TGTATTTGAAATGCTGAACA+AGG | - | tig0030733:1815-1834 | Msa1444500:CDS | 30.0% |
TAATGAAAACAAAGTTACGG+AGG | - | tig0030733:1854-1873 | Msa1444500:CDS | 30.0% | |
!! | AAAATTGTGGAGGGTGTTAA+TGG | + | tig0030733:252-271 | None:intergenic | 35.0% |
! | TGTTTGAGGTGAGAAAATTG+TGG | + | tig0030733:265-284 | None:intergenic | 35.0% |
ATTTCAGCTGAATCAACAGA+AGG | + | tig0030733:390-409 | None:intergenic | 35.0% | |
! | TGATTCAGCTGAAATTTTGG+AGG | - | tig0030733:395-414 | Msa1444500:intron | 35.0% |
GAAGGATTCAAGAAATGTTG+AGG | - | tig0030733:431-450 | Msa1444500:intron | 35.0% | |
AAATGTTGAGGCTCTTAAAG+TGG | - | tig0030733:443-462 | Msa1444500:intron | 35.0% | |
CTCTTAAAGTGGTTGTGTAT+GGG | - | tig0030733:454-473 | Msa1444500:intron | 35.0% | |
TGGTTGTGTATGGGAAAATT+AGG | - | tig0030733:463-482 | Msa1444500:intron | 35.0% | |
TGTATGGGAAAATTAGGAGA+GGG | - | tig0030733:469-488 | Msa1444500:CDS | 35.0% | |
TGCATTGTGTTATGAGACAA+TGG | - | tig0030733:569-588 | Msa1444500:intron | 35.0% | |
GCATTGTGTTATGAGACAAT+GGG | - | tig0030733:570-589 | Msa1444500:intron | 35.0% | |
CATTGTGTTATGAGACAATG+GGG | - | tig0030733:571-590 | Msa1444500:intron | 35.0% | |
! | ATGAAGAGCTCTAACAAAAG+AGG | + | tig0030733:645-664 | None:intergenic | 35.0% |
! | AAACAAGTTGTGTTGCTGAT+TGG | - | tig0030733:1089-1108 | Msa1444500:intron | 35.0% |
! | GATTGGTAATCATGGCTATT+AGG | - | tig0030733:1106-1125 | Msa1444500:intron | 35.0% |
TGAGCCTTAGTATGTATTTC+GGG | - | tig0030733:1375-1394 | Msa1444500:intron | 35.0% | |
TCTTCCCGAAATACATACTA+AGG | + | tig0030733:1382-1401 | None:intergenic | 35.0% | |
TTAGTATGTATTTCGGGAAG+AGG | - | tig0030733:1381-1400 | Msa1444500:intron | 35.0% | |
! | AACTGTGCAGTGTTGTTAAA+TGG | - | tig0030733:1487-1506 | Msa1444500:CDS | 35.0% |
! | TGAACACCACCATTTTACTT+TGG | - | tig0030733:1544-1563 | Msa1444500:CDS | 35.0% |
CTGAATCCAAAGTAAAATGG+TGG | + | tig0030733:1553-1572 | None:intergenic | 35.0% | |
TTTGCTAGATGCTTCTTTGA+CGG | - | tig0030733:1584-1603 | Msa1444500:CDS | 35.0% | |
!!! | ACTATTTTGACGGCATTTTG+TGG | + | tig0030733:1649-1668 | None:intergenic | 35.0% |
AACAAACAAATTGAGTGTCC+TGG | + | tig0030733:1707-1726 | None:intergenic | 35.0% | |
! | AGTGATACTCTCTTTTCTAC+AGG | - | tig0030733:1752-1771 | Msa1444500:CDS | 35.0% |
! | ACTCTCTTTTCTACAGGTTT+TGG | - | tig0030733:1758-1777 | Msa1444500:CDS | 35.0% |
!!! | TTTTCTACAGGTTTTGGCTA+TGG | - | tig0030733:1764-1783 | Msa1444500:CDS | 35.0% |
GTGATGCACAAAAACAATGA+GGG | - | tig0030733:1786-1805 | Msa1444500:CDS | 35.0% | |
TTCAGCATTTCAAATACAGC+AGG | + | tig0030733:1813-1832 | None:intergenic | 35.0% | |
TTACGGAGGAGAGAAATATA+AGG | - | tig0030733:1868-1887 | Msa1444500:CDS | 35.0% | |
TTGCACAAATGTGTTGTAAC+AGG | - | tig0030733:1898-1917 | Msa1444500:CDS | 35.0% | |
AACTCGTAGTAGATAAGCAA+AGG | + | tig0030733:1951-1970 | None:intergenic | 35.0% | |
ATAACATATGTGTGCTTTGC+AGG | - | tig0030733:2017-2036 | Msa1444500:CDS | 35.0% | |
TAACATATGTGTGCTTTGCA+GGG | - | tig0030733:2018-2037 | Msa1444500:CDS | 35.0% | |
!! | AAAATTGTGGAGGGTGTTAA+TGG | + | tig0030733:252-271 | None:intergenic | 35.0% |
! | TGTTTGAGGTGAGAAAATTG+TGG | + | tig0030733:265-284 | None:intergenic | 35.0% |
ATTTCAGCTGAATCAACAGA+AGG | + | tig0030733:390-409 | None:intergenic | 35.0% | |
! | TGATTCAGCTGAAATTTTGG+AGG | - | tig0030733:395-414 | Msa1444500:intron | 35.0% |
GAAGGATTCAAGAAATGTTG+AGG | - | tig0030733:431-450 | Msa1444500:intron | 35.0% | |
AAATGTTGAGGCTCTTAAAG+TGG | - | tig0030733:443-462 | Msa1444500:intron | 35.0% | |
CTCTTAAAGTGGTTGTGTAT+GGG | - | tig0030733:454-473 | Msa1444500:intron | 35.0% | |
TGGTTGTGTATGGGAAAATT+AGG | - | tig0030733:463-482 | Msa1444500:intron | 35.0% | |
TGTATGGGAAAATTAGGAGA+GGG | - | tig0030733:469-488 | Msa1444500:CDS | 35.0% | |
TGCATTGTGTTATGAGACAA+TGG | - | tig0030733:569-588 | Msa1444500:intron | 35.0% | |
GCATTGTGTTATGAGACAAT+GGG | - | tig0030733:570-589 | Msa1444500:intron | 35.0% | |
CATTGTGTTATGAGACAATG+GGG | - | tig0030733:571-590 | Msa1444500:intron | 35.0% | |
! | ATGAAGAGCTCTAACAAAAG+AGG | + | tig0030733:645-664 | None:intergenic | 35.0% |
! | AAACAAGTTGTGTTGCTGAT+TGG | - | tig0030733:1089-1108 | Msa1444500:intron | 35.0% |
! | GATTGGTAATCATGGCTATT+AGG | - | tig0030733:1106-1125 | Msa1444500:intron | 35.0% |
TGAGCCTTAGTATGTATTTC+GGG | - | tig0030733:1375-1394 | Msa1444500:intron | 35.0% | |
TCTTCCCGAAATACATACTA+AGG | + | tig0030733:1382-1401 | None:intergenic | 35.0% | |
TTAGTATGTATTTCGGGAAG+AGG | - | tig0030733:1381-1400 | Msa1444500:intron | 35.0% | |
! | AACTGTGCAGTGTTGTTAAA+TGG | - | tig0030733:1487-1506 | Msa1444500:CDS | 35.0% |
! | TGAACACCACCATTTTACTT+TGG | - | tig0030733:1544-1563 | Msa1444500:CDS | 35.0% |
CTGAATCCAAAGTAAAATGG+TGG | + | tig0030733:1553-1572 | None:intergenic | 35.0% | |
TTTGCTAGATGCTTCTTTGA+CGG | - | tig0030733:1584-1603 | Msa1444500:CDS | 35.0% | |
!!! | ACTATTTTGACGGCATTTTG+TGG | + | tig0030733:1649-1668 | None:intergenic | 35.0% |
AACAAACAAATTGAGTGTCC+TGG | + | tig0030733:1707-1726 | None:intergenic | 35.0% | |
! | AGTGATACTCTCTTTTCTAC+AGG | - | tig0030733:1752-1771 | Msa1444500:CDS | 35.0% |
! | ACTCTCTTTTCTACAGGTTT+TGG | - | tig0030733:1758-1777 | Msa1444500:CDS | 35.0% |
!!! | TTTTCTACAGGTTTTGGCTA+TGG | - | tig0030733:1764-1783 | Msa1444500:CDS | 35.0% |
GTGATGCACAAAAACAATGA+GGG | - | tig0030733:1786-1805 | Msa1444500:CDS | 35.0% | |
TTCAGCATTTCAAATACAGC+AGG | + | tig0030733:1813-1832 | None:intergenic | 35.0% | |
TTACGGAGGAGAGAAATATA+AGG | - | tig0030733:1868-1887 | Msa1444500:CDS | 35.0% | |
TTGCACAAATGTGTTGTAAC+AGG | - | tig0030733:1898-1917 | Msa1444500:CDS | 35.0% | |
AACTCGTAGTAGATAAGCAA+AGG | + | tig0030733:1951-1970 | None:intergenic | 35.0% | |
ATAACATATGTGTGCTTTGC+AGG | - | tig0030733:2017-2036 | Msa1444500:CDS | 35.0% | |
TAACATATGTGTGCTTTGCA+GGG | - | tig0030733:2018-2037 | Msa1444500:CDS | 35.0% | |
GAGATATGGTTTGAACTCTG+AGG | + | tig0030733:115-134 | None:intergenic | 40.0% | |
ACGAATTCGTGGCAAAAGAA+GGG | + | tig0030733:145-164 | None:intergenic | 40.0% | |
TACGAATTCGTGGCAAAAGA+AGG | + | tig0030733:146-165 | None:intergenic | 40.0% | |
TTGTTGCAGATACGAATTCG+TGG | + | tig0030733:156-175 | None:intergenic | 40.0% | |
! | TGGGTAGCACGAAATTTTGA+TGG | + | tig0030733:201-220 | None:intergenic | 40.0% |
TGAGGTGAGAAAATTGTGGA+GGG | + | tig0030733:261-280 | None:intergenic | 40.0% | |
TTGAGGTGAGAAAATTGTGG+AGG | + | tig0030733:262-281 | None:intergenic | 40.0% | |
!! | AGGTACTGAAACTGCAAAAG+CGG | + | tig0030733:370-389 | None:intergenic | 40.0% |
GCTCTTAAAGTGGTTGTGTA+TGG | - | tig0030733:453-472 | Msa1444500:intron | 40.0% | |
GTGTATGGGAAAATTAGGAG+AGG | - | tig0030733:468-487 | Msa1444500:CDS | 40.0% | |
AAGCTGAGAAGTTTGTGAAG+AGG | - | tig0030733:502-521 | Msa1444500:intron | 40.0% | |
! | TGTGAAGAGGTTGATTGATG+AGG | - | tig0030733:515-534 | Msa1444500:intron | 40.0% |
GATTGATGAGGAACCAAATG+AGG | - | tig0030733:527-546 | Msa1444500:intron | 40.0% | |
! | GACAATGGGGTATTTGAGTA+AGG | - | tig0030733:584-603 | Msa1444500:intron | 40.0% |
GGGTATTTGAGTAAGGCTAA+AGG | - | tig0030733:591-610 | Msa1444500:intron | 40.0% | |
!! | TTGTTGACTTAGGGTCTGTT+TGG | - | tig0030733:832-851 | Msa1444500:intron | 40.0% |
AAGTTATCGTGGAGAGCTTA+TGG | + | tig0030733:954-973 | None:intergenic | 40.0% | |
! | GTGTTGCTGATTGGTAATCA+TGG | - | tig0030733:1098-1117 | Msa1444500:intron | 40.0% |
CTTTGGATTCAGATTGAAGG+TGG | - | tig0030733:1561-1580 | Msa1444500:CDS | 40.0% | |
GGTGATGCACAAAAACAATG+AGG | - | tig0030733:1785-1804 | Msa1444500:CDS | 40.0% | |
GAGATATGGTTTGAACTCTG+AGG | + | tig0030733:115-134 | None:intergenic | 40.0% | |
ACGAATTCGTGGCAAAAGAA+GGG | + | tig0030733:145-164 | None:intergenic | 40.0% | |
TACGAATTCGTGGCAAAAGA+AGG | + | tig0030733:146-165 | None:intergenic | 40.0% | |
TTGTTGCAGATACGAATTCG+TGG | + | tig0030733:156-175 | None:intergenic | 40.0% | |
! | TGGGTAGCACGAAATTTTGA+TGG | + | tig0030733:201-220 | None:intergenic | 40.0% |
TGAGGTGAGAAAATTGTGGA+GGG | + | tig0030733:261-280 | None:intergenic | 40.0% | |
TTGAGGTGAGAAAATTGTGG+AGG | + | tig0030733:262-281 | None:intergenic | 40.0% | |
!! | AGGTACTGAAACTGCAAAAG+CGG | + | tig0030733:370-389 | None:intergenic | 40.0% |
GCTCTTAAAGTGGTTGTGTA+TGG | - | tig0030733:453-472 | Msa1444500:intron | 40.0% | |
GTGTATGGGAAAATTAGGAG+AGG | - | tig0030733:468-487 | Msa1444500:CDS | 40.0% | |
AAGCTGAGAAGTTTGTGAAG+AGG | - | tig0030733:502-521 | Msa1444500:intron | 40.0% | |
! | TGTGAAGAGGTTGATTGATG+AGG | - | tig0030733:515-534 | Msa1444500:intron | 40.0% |
GATTGATGAGGAACCAAATG+AGG | - | tig0030733:527-546 | Msa1444500:intron | 40.0% | |
! | GACAATGGGGTATTTGAGTA+AGG | - | tig0030733:584-603 | Msa1444500:intron | 40.0% |
GGGTATTTGAGTAAGGCTAA+AGG | - | tig0030733:591-610 | Msa1444500:intron | 40.0% | |
!! | TTGTTGACTTAGGGTCTGTT+TGG | - | tig0030733:832-851 | Msa1444500:intron | 40.0% |
AAGTTATCGTGGAGAGCTTA+TGG | + | tig0030733:954-973 | None:intergenic | 40.0% | |
! | GTGTTGCTGATTGGTAATCA+TGG | - | tig0030733:1098-1117 | Msa1444500:intron | 40.0% |
CTTTGGATTCAGATTGAAGG+TGG | - | tig0030733:1561-1580 | Msa1444500:CDS | 40.0% | |
GGTGATGCACAAAAACAATG+AGG | - | tig0030733:1785-1804 | Msa1444500:CDS | 40.0% | |
AGAAGGGAATTGGGGAGATA+TGG | + | tig0030733:129-148 | None:intergenic | 45.0% | |
GTGGCAAAAGAAGGGAATTG+GGG | + | tig0030733:137-156 | None:intergenic | 45.0% | |
CGTGGCAAAAGAAGGGAATT+GGG | + | tig0030733:138-157 | None:intergenic | 45.0% | |
TCGTGGCAAAAGAAGGGAAT+TGG | + | tig0030733:139-158 | None:intergenic | 45.0% | |
! | GGTACTGAAACTGCAAAAGC+GGG | + | tig0030733:369-388 | None:intergenic | 45.0% |
!! | GGAGGAGAAGATTTTGGAGA+AGG | - | tig0030733:413-432 | Msa1444500:intron | 45.0% |
AGGAACCAAATGAGGTTGAG+TGG | - | tig0030733:535-554 | Msa1444500:intron | 45.0% | |
AACCAAATGAGGTTGAGTGG+AGG | - | tig0030733:538-557 | Msa1444500:intron | 45.0% | |
GATGAATATTAGACGGCGCT+AGG | - | tig0030733:1425-1444 | Msa1444500:intron | 45.0% | |
CTATGACGCTTGTCAAACAC+CGG | + | tig0030733:1524-1543 | None:intergenic | 45.0% | |
! | GCTTCTTTGACGGCATTTTG+TGG | - | tig0030733:1594-1613 | Msa1444500:CDS | 45.0% |
AGAAGGGAATTGGGGAGATA+TGG | + | tig0030733:129-148 | None:intergenic | 45.0% | |
GTGGCAAAAGAAGGGAATTG+GGG | + | tig0030733:137-156 | None:intergenic | 45.0% | |
CGTGGCAAAAGAAGGGAATT+GGG | + | tig0030733:138-157 | None:intergenic | 45.0% | |
TCGTGGCAAAAGAAGGGAAT+TGG | + | tig0030733:139-158 | None:intergenic | 45.0% | |
! | GGTACTGAAACTGCAAAAGC+GGG | + | tig0030733:369-388 | None:intergenic | 45.0% |
!! | GGAGGAGAAGATTTTGGAGA+AGG | - | tig0030733:413-432 | Msa1444500:intron | 45.0% |
AGGAACCAAATGAGGTTGAG+TGG | - | tig0030733:535-554 | Msa1444500:intron | 45.0% | |
AACCAAATGAGGTTGAGTGG+AGG | - | tig0030733:538-557 | Msa1444500:intron | 45.0% | |
GATGAATATTAGACGGCGCT+AGG | - | tig0030733:1425-1444 | Msa1444500:intron | 45.0% | |
CTATGACGCTTGTCAAACAC+CGG | + | tig0030733:1524-1543 | None:intergenic | 45.0% | |
! | GCTTCTTTGACGGCATTTTG+TGG | - | tig0030733:1594-1613 | Msa1444500:CDS | 45.0% |
! | CTCTGAGGAGATGAAGAGAG+TGG | + | tig0030733:100-119 | None:intergenic | 50.0% |
!! | TGGAGGGTGTTAATGGAGTG+CGG | + | tig0030733:245-264 | None:intergenic | 50.0% |
AGCCTCCACTCAACCTCATT+TGG | + | tig0030733:543-562 | None:intergenic | 50.0% | |
CATATGTGTGCTTTGCAGGG+TGG | - | tig0030733:2021-2040 | Msa1444500:CDS | 50.0% | |
! | CTCTGAGGAGATGAAGAGAG+TGG | + | tig0030733:100-119 | None:intergenic | 50.0% |
!! | TGGAGGGTGTTAATGGAGTG+CGG | + | tig0030733:245-264 | None:intergenic | 50.0% |
AGCCTCCACTCAACCTCATT+TGG | + | tig0030733:543-562 | None:intergenic | 50.0% | |
CATATGTGTGCTTTGCAGGG+TGG | - | tig0030733:2021-2040 | Msa1444500:CDS | 50.0% | |
!! | GGAGGGTGTTAATGGAGTGC+GGG | + | tig0030733:244-263 | None:intergenic | 55.0% |
TTAAATGGCGACGCCGTGAC+CGG | - | tig0030733:1502-1521 | Msa1444500:CDS | 55.0% | |
CGCTTGTCAAACACCGGTCA+CGG | + | tig0030733:1518-1537 | None:intergenic | 55.0% | |
GTGCTTTGCAGGGTGGTGAT+TGG | - | tig0030733:2028-2047 | Msa1444500:CDS | 55.0% | |
CTTTGCAGGGTGGTGATTGG+AGG | - | tig0030733:2031-2050 | Msa1444500:CDS | 55.0% | |
!! | GGAGGGTGTTAATGGAGTGC+GGG | + | tig0030733:244-263 | None:intergenic | 55.0% |
TTAAATGGCGACGCCGTGAC+CGG | - | tig0030733:1502-1521 | Msa1444500:CDS | 55.0% | |
CGCTTGTCAAACACCGGTCA+CGG | + | tig0030733:1518-1537 | None:intergenic | 55.0% | |
GTGCTTTGCAGGGTGGTGAT+TGG | - | tig0030733:2028-2047 | Msa1444500:CDS | 55.0% | |
CTTTGCAGGGTGGTGATTGG+AGG | - | tig0030733:2031-2050 | Msa1444500:CDS | 55.0% | |
TGCAGGGTGGTGATTGGAGG+AGG | - | tig0030733:2034-2053 | Msa1444500:CDS | 60.0% | |
GCAGGGTGGTGATTGGAGGA+GGG | - | tig0030733:2035-2054 | Msa1444500:CDS | 60.0% | |
TGCAGGGTGGTGATTGGAGG+AGG | - | tig0030733:2034-2053 | Msa1444500:CDS | 60.0% | |
GCAGGGTGGTGATTGGAGGA+GGG | - | tig0030733:2035-2054 | Msa1444500:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0030733 | gene | 57 | 2081 | 57 | ID=Msa1444500;Name=Msa1444500 |
tig0030733 | mRNA | 57 | 2081 | 57 | ID=Msa1444500-mRNA-1;Parent=Msa1444500;Name=Msa1444500-mRNA-1;_AED=0.11;_eAED=0.16;_QI=21|0|0.25|0.75|0.33|0.75|4|0|268 |
tig0030733 | exon | 57 | 99 | 57 | ID=Msa1444500-mRNA-1:exon:14524;Parent=Msa1444500-mRNA-1 |
tig0030733 | exon | 219 | 364 | 219 | ID=Msa1444500-mRNA-1:exon:14523;Parent=Msa1444500-mRNA-1 |
tig0030733 | exon | 467 | 497 | 467 | ID=Msa1444500-mRNA-1:exon:14522;Parent=Msa1444500-mRNA-1 |
tig0030733 | exon | 1474 | 2081 | 1474 | ID=Msa1444500-mRNA-1:exon:14521;Parent=Msa1444500-mRNA-1 |
tig0030733 | five_prime_UTR | 2061 | 2081 | 2061 | ID=Msa1444500-mRNA-1:five_prime_utr;Parent=Msa1444500-mRNA-1 |
tig0030733 | CDS | 1474 | 2060 | 1474 | ID=Msa1444500-mRNA-1:cds;Parent=Msa1444500-mRNA-1 |
tig0030733 | CDS | 467 | 497 | 467 | ID=Msa1444500-mRNA-1:cds;Parent=Msa1444500-mRNA-1 |
tig0030733 | CDS | 219 | 364 | 219 | ID=Msa1444500-mRNA-1:cds;Parent=Msa1444500-mRNA-1 |
tig0030733 | CDS | 57 | 99 | 57 | ID=Msa1444500-mRNA-1:cds;Parent=Msa1444500-mRNA-1 |
Gene Sequence |
Protein sequence |