AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0051600


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0051600 MtrunA17_Chr1g0153801 93.793 290 15 2 1 288 1 289 0.0 511
Msa0051600 MtrunA17_Chr2g0305941 49.321 221 107 2 67 287 65 280 1.67e-74 229
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0051600 AT2G26550.2 59.766 256 91 1 45 288 44 299 4.16e-103 303
Msa0051600 AT2G26550.3 56.458 271 91 2 45 288 44 314 5.15e-99 293
Msa0051600 AT2G26550.1 49.518 311 90 3 45 288 44 354 6.17e-90 271
Msa0051600 AT2G26550.4 60.000 210 72 1 61 258 60 269 6.53e-82 248
Msa0051600 AT2G26670.1 50.901 222 104 2 67 287 64 281 8.15e-81 246
Msa0051600 AT1G69720.1 51.584 221 104 2 67 287 67 284 6.09e-78 238
Msa0051600 AT1G69720.3 51.584 221 104 2 67 287 67 284 6.09e-78 238
Msa0051600 AT1G58300.1 42.586 263 133 3 26 287 37 282 2.13e-70 219
Msa0051600 AT2G26670.2 42.601 223 77 2 65 287 62 233 4.51e-60 191
Msa0051600 AT1G69720.2 48.447 161 80 2 67 227 67 224 4.69e-48 160

Find 100 sgRNAs with CRISPR-Local

Find 289 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGCAAGTTCCTCTAAATATT+TGG 0.110208 1_2:+5694272 None:intergenic
AAGAAAATGATGACGCTTAT+AGG 0.180424 1_2:-5691613 Msa0051600:three_prime_UTR
AATAAGATTTAGTATAAAAT+TGG 0.184915 1_2:-5695627 Msa0051600:five_prime_UTR
GAGAATGATGATTCTTCTTC+TGG 0.223274 1_2:+5695444 None:intergenic
TTCTGTATTGTAGCTGTTCT+AGG 0.224531 1_2:-5691539 Msa0051600:three_prime_UTR
GAAAGGCTTTCTTCGATTCT+TGG 0.256872 1_2:-5695179 Msa0051600:CDS
CCTCATCTCTTCGGTGATTC+CGG 0.265544 1_2:+5695312 None:intergenic
GTTGTCACGCCTCACATTTA+TGG 0.270091 1_2:-5692015 Msa0051600:three_prime_UTR
ATTTAGTATAAAATTGGATT+TGG 0.297233 1_2:-5695621 Msa0051600:five_prime_UTR
CAAACTACAGAGAACTTAAA+TGG 0.299562 1_2:+5691725 None:intergenic
CTGAGGTGCTAATTGTAAAA+TGG 0.313698 1_2:+5691575 None:intergenic
CGAAGAAAGCCTTTCATAGA+AGG 0.348541 1_2:+5695187 None:intergenic
TAACCTGGCCCTGGCAGCTT+TGG 0.349399 1_2:+5691976 None:intergenic
GGGCCAGGTTACATCTGTTA+TGG 0.369645 1_2:-5691964 Msa0051600:three_prime_UTR
ACTCCAGCTCCTTACCTTCC+AGG 0.374412 1_2:+5692755 None:intergenic
GAACAATCTGTCCCATAAAC+TGG 0.386716 1_2:+5692512 None:intergenic
GTCTAGAGATGTGGCTTAGC+TGG 0.391311 1_2:-5691872 Msa0051600:three_prime_UTR
ATAGTGCAAGTAGGAAATAA+TGG 0.392038 1_2:+5691769 None:intergenic
GATGCATACTTGAGGAAAAC+TGG 0.393679 1_2:-5694390 Msa0051600:CDS
GTGATTCCGGTGGTTTCACC+AGG 0.410208 1_2:+5695325 None:intergenic
TTTGTCGCTGTGGAGTTTCA+TGG 0.410902 1_2:+5695282 None:intergenic
TACATATGCCAAATATTTAG+AGG 0.415258 1_2:-5694280 Msa0051600:CDS
ATAGAAGGATACCACGTGTC+AGG 0.419281 1_2:+5695202 None:intergenic
GAAACCGTTATATTCTACTT+TGG 0.421202 1_2:+5691486 None:intergenic
AAAATGGATATTGTAGAAAT+GGG 0.422336 1_2:+5694224 None:intergenic
TTCTTCTTCTTATCCACCGT+TGG 0.435389 1_2:-5695380 Msa0051600:CDS
CGAACGCATTGTTGATGATT+CGG 0.450060 1_2:-5695128 Msa0051600:CDS
ATTTGCCTTACTTATTGCTA+TGG 0.459682 1_2:-5691941 Msa0051600:three_prime_UTR
TGAAGATTTCTTTCTTATTG+TGG 0.459734 1_2:-5691792 Msa0051600:three_prime_UTR
TTTCCAAAGCTGCCAGGGCC+AGG 0.463813 1_2:-5691979 Msa0051600:three_prime_UTR
TTCTCATATAACTGCTGGCC+AGG 0.466119 1_2:-5694202 Msa0051600:CDS
TAGTATAAAATTGGATTTGG+AGG 0.468249 1_2:-5695618 Msa0051600:five_prime_UTR
TTAGGTATCTGAAAAGCTCC+TGG 0.483336 1_2:-5692773 Msa0051600:intron
ATTTGTGCAGCATTGGGGTC+GGG 0.486709 1_2:-5692575 Msa0051600:intron
AAAATCCATAGCAATAAGTA+AGG 0.492889 1_2:+5691936 None:intergenic
GGTGTTGAAGCGTGTTCGAT+TGG 0.492898 1_2:+5695465 None:intergenic
GAAGGATCTAGAATGGTTGA+AGG 0.493575 1_2:-5694343 Msa0051600:CDS
TATGTAGTACCAGGTGAACT+TGG 0.493729 1_2:+5694297 None:intergenic
AGTACCAGGTGAACTTGGAT+TGG 0.500411 1_2:+5694302 None:intergenic
AGTGTTGATGATGGTGGGAA+TGG 0.502339 1_2:+5695490 None:intergenic
AGGAGCTGGAGTTCTGCAAA+TGG 0.505314 1_2:-5692744 Msa0051600:CDS
AATTTGTGCAGCATTGGGGT+CGG 0.511624 1_2:-5692576 Msa0051600:intron
CCATGGTTGTTGCAGTTGAG+TGG 0.513441 1_2:+5695516 None:intergenic
ATAAGAAGAAGAAGATGAAG+AGG 0.514379 1_2:+5695390 None:intergenic
AATTACATGTGAAGTTTCTG+TGG 0.514825 1_2:+5691664 None:intergenic
TGAAAAGCTCCTGGAAGGTA+AGG 0.515112 1_2:-5692764 Msa0051600:CDS
CGTCTGATCATCTTATAAAG+AGG 0.518449 1_2:-5692490 Msa0051600:exon
GTACCAGGTGAACTTGGATT+GGG 0.518612 1_2:+5694303 None:intergenic
GGCAACGAACCTCATCTCTT+CGG 0.520653 1_2:+5695303 None:intergenic
AACGAAATTGTCACTCCACC+TGG 0.522060 1_2:+5691903 None:intergenic
CAAATGGGAAGGAGATGTAC+AGG 0.523655 1_2:-5692728 Msa0051600:CDS
AGTGGTATTGTTGACGGTGT+TGG 0.527238 1_2:+5695258 None:intergenic
GTGTTGAAGCGTGTTCGATT+GGG 0.527957 1_2:+5695466 None:intergenic
AACAGAAGTGGTATTGTTGA+CGG 0.534137 1_2:+5695252 None:intergenic
CATCTCTTCGGTGATTCCGG+TGG 0.534391 1_2:+5695315 None:intergenic
TCAGTAATACTGCAATATCA+TGG 0.537215 1_2:+5691812 None:intergenic
ATACTTGAGGAAAACTGGAT+TGG 0.541626 1_2:-5694385 Msa0051600:CDS
GGAGCTGGAGTTCTGCAAAT+GGG 0.549742 1_2:-5692743 Msa0051600:CDS
TTCATTAGAGTCTAGAGATG+TGG 0.552909 1_2:-5691881 Msa0051600:three_prime_UTR
TGGGAGCGTTAACTGTAGCT+TGG 0.555696 1_2:-5692068 Msa0051600:three_prime_UTR
CATGGTTGTTGCAGTTGAGT+GGG 0.555894 1_2:+5695517 None:intergenic
CTAGAATGGTTGAAGGAACA+AGG 0.560120 1_2:-5694336 Msa0051600:CDS
TAACAGATGTAACCTGGCCC+TGG 0.562262 1_2:+5691967 None:intergenic
ACTGGATTGGAAAGATCTGA+AGG 0.563903 1_2:-5694372 Msa0051600:CDS
GCTCCTGGAAGGTAAGGAGC+TGG 0.564683 1_2:-5692758 Msa0051600:CDS
GTCTTCTACTACAACAGAAG+TGG 0.573939 1_2:+5695240 None:intergenic
TTGGGAAGTGTTGATGATGG+TGG 0.574296 1_2:+5695484 None:intergenic
CTTTACCCTGGTGAAACCAC+CGG 0.583875 1_2:-5695331 Msa0051600:CDS
TGATCATCTTATAAAGAGGC+CGG 0.584709 1_2:-5692486 Msa0051600:exon
TGGCCAGGTTATTACAAAGC+AGG 0.585011 1_2:-5694187 Msa0051600:intron
ACGTGGTATCCTTCTATGAA+AGG 0.586528 1_2:-5695196 Msa0051600:CDS
CGATTGGGAAGTGTTGATGA+TGG 0.589944 1_2:+5695481 None:intergenic
GTACCTGCTTTGTAATAACC+TGG 0.590707 1_2:+5694184 None:intergenic
CAAATATTTAGAGGAACTTG+CGG 0.593836 1_2:-5694271 Msa0051600:CDS
GTATCTGAAAAGCTCCTGGA+AGG 0.595672 1_2:-5692769 Msa0051600:CDS
TGGGAAGTGTTGATGATGGT+GGG 0.598542 1_2:+5695485 None:intergenic
TAGAAGGATACCACGTGTCA+GGG 0.599723 1_2:+5695203 None:intergenic
CGCTATCGAAAACTTTACCC+TGG 0.601205 1_2:-5695343 Msa0051600:CDS
TATTTGGCATATGTAGTACC+AGG 0.604625 1_2:+5694288 None:intergenic
ATTCCCAATCCAAGTTCACC+TGG 0.607725 1_2:-5694306 Msa0051600:CDS
CTGGAGTTCTGCAAATGGGA+AGG 0.610060 1_2:-5692739 Msa0051600:CDS
TAGAAATGGGAAAGAAACAA+AGG 0.614055 1_2:+5694237 None:intergenic
AATCCATAACAGATGTAACC+TGG 0.614119 1_2:+5691961 None:intergenic
ATTGAATTGCCATAAATGTG+AGG 0.616747 1_2:+5692006 None:intergenic
GAATTGCAGATGCATACTTG+AGG 0.618600 1_2:-5694398 Msa0051600:intron
GTGTCGCTATGTAGGATAGG+GGG 0.626884 1_2:-5692097 Msa0051600:intron
CCACTCAACTGCAACAACCA+TGG 0.631304 1_2:-5695516 Msa0051600:CDS
TCATCTTATAAAGAGGCCGG+TGG 0.633941 1_2:-5692483 Msa0051600:exon
TTGTAATTTGTGCAGCATTG+GGG 0.639959 1_2:-5692580 Msa0051600:intron
CATCTTATAAAGAGGCCGGT+GGG 0.641764 1_2:-5692482 Msa0051600:exon
CCGGAATCACCGAAGAGATG+AGG 0.642207 1_2:-5695312 Msa0051600:CDS
AGTGTCGCTATGTAGGATAG+GGG 0.644548 1_2:-5692098 Msa0051600:intron
AGCCACAAAATAGTGCAAGT+AGG 0.650331 1_2:+5691760 None:intergenic
GAAGCTTAACGTGCTTGCAG+AGG 0.660843 1_2:-5692683 Msa0051600:intron
TGTCGCTATGTAGGATAGGG+GGG 0.665338 1_2:-5692096 Msa0051600:intron
TGATTCCGGTGGTTTCACCA+GGG 0.673875 1_2:+5695326 None:intergenic
GTTGTAGTAGAAGACTGTGA+AGG 0.688185 1_2:-5695232 Msa0051600:CDS
AGAAATTACAGTAAAGACTG+AGG 0.689610 1_2:+5691558 None:intergenic
GATGGTGGGAATGGTAACCA+TGG 0.718374 1_2:+5695499 None:intergenic
AAGGACAAATCCCTGACACG+TGG 0.718573 1_2:-5695213 Msa0051600:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATTTTTAAATTTTTTTAT+AGG - chr1_2:5693618-5693637 Msa0051600:intron 0.0%
!!! TTTTTTGAATGATTTTTTTT+TGG + chr1_2:5693169-5693188 None:intergenic 10.0%
!! AATCATTCAAAAAAAAAAAT+TGG - chr1_2:5693175-5693194 Msa0051600:intron 10.0%
!!! TCTTTATTTTTTTTTAATCT+GGG + chr1_2:5693742-5693761 None:intergenic 10.0%
!!! ATCTTTATTTTTTTTTAATC+TGG + chr1_2:5693743-5693762 None:intergenic 10.0%
!! TGTTAAATTAAAAAAAATCA+AGG + chr1_2:5694097-5694116 None:intergenic 10.0%
!! ATTTAGTATAAAATTGGATT+TGG - chr1_2:5691497-5691516 Msa0051600:three_prime_UTR 15.0%
!! TAACAAAATCAAAATCAAAT+TGG + chr1_2:5692375-5692394 None:intergenic 15.0%
!! TAATAGTTGTTTATTCAAAT+AGG - chr1_2:5692629-5692648 Msa0051600:intron 15.0%
!! AATAGTTGTTTATTCAAATA+GGG - chr1_2:5692630-5692649 Msa0051600:intron 15.0%
!!! TATTTGATAGAATTTTTTGT+TGG - chr1_2:5693480-5693499 Msa0051600:intron 15.0%
!!! ATTTGATAGAATTTTTTGTT+GGG - chr1_2:5693481-5693500 Msa0051600:intron 15.0%
!!! TTTAATTTAACACAGATATT+AGG - chr1_2:5694105-5694124 Msa0051600:intron 15.0%
!!! TTATACTTATTATTTTTGTG+TGG - chr1_2:5694515-5694534 Msa0051600:intron 15.0%
!!! ACTTTGAATTCATTAATTTG+AGG - chr1_2:5692087-5692106 Msa0051600:intron 20.0%
!!! AATCAAATTGGTTTCATTTA+AGG + chr1_2:5692363-5692382 None:intergenic 20.0%
!!! TCGCAAAATAACAAATTTTA+TGG - chr1_2:5692497-5692516 Msa0051600:CDS 20.0%
!!! TTGATTTGATTTAGTTATGA+TGG - chr1_2:5692677-5692696 Msa0051600:intron 20.0%
!! AAAATGGATATTGTAGAAAT+GGG + chr1_2:5692897-5692916 None:intergenic 20.0%
!! AAAAATGGATATTGTAGAAA+TGG + chr1_2:5692898-5692917 None:intergenic 20.0%
!! AGCTAATTTAAACTTATATG+AGG - chr1_2:5693206-5693225 Msa0051600:intron 20.0%
!! GATTTATTGTTTAACAATCA+AGG - chr1_2:5693228-5693247 Msa0051600:intron 20.0%
!!! TTTTTTTTTAATCCTGATGA+TGG - chr1_2:5693339-5693358 Msa0051600:intron 20.0%
!!! TTTTTTTTAATCCTGATGAT+GGG - chr1_2:5693340-5693359 Msa0051600:intron 20.0%
!! ATAATGATAAAACACAAACA+CGG + chr1_2:5693591-5693610 None:intergenic 20.0%
!!! TTTTTTATAGGTAAGTGAAA+CGG - chr1_2:5693630-5693649 Msa0051600:intron 20.0%
!!! ATTTTTTTTTAATCTGGGAA+TGG + chr1_2:5693737-5693756 None:intergenic 20.0%
!! TAAAAAGTTAGTGATAAGAT+AGG - chr1_2:5693810-5693829 Msa0051600:intron 20.0%
!! AAAAAGTTAGTGATAAGATA+GGG - chr1_2:5693811-5693830 Msa0051600:intron 20.0%
!! TCTTTAATAAAGAATTCCTT+AGG + chr1_2:5694259-5694278 None:intergenic 20.0%
!!! TTTTTCCATTTAAGCATTTT+GGG + chr1_2:5694852-5694871 None:intergenic 20.0%
!!! ATTTTTCCATTTAAGCATTT+TGG + chr1_2:5694853-5694872 None:intergenic 20.0%
!!! ACATTTGATTGCATTATTTT+TGG - chr1_2:5694931-5694950 Msa0051600:intron 20.0%
!! CATGTAATTTATAAAAATGC+CGG - chr1_2:5695468-5695487 Msa0051600:CDS 20.0%
! TAGTATAAAATTGGATTTGG+AGG - chr1_2:5691500-5691519 Msa0051600:three_prime_UTR 25.0%
! TAAGTGTTTGTTTGGTTATA+TGG - chr1_2:5692052-5692071 Msa0051600:three_prime_UTR 25.0%
!!! GTTTGTAGCTTATTTCTATA+AGG - chr1_2:5692307-5692326 Msa0051600:intron 25.0%
! TTGTGTAACAAAACACTTAT+AGG - chr1_2:5692432-5692451 Msa0051600:intron 25.0%
! ACAAAACACTTATAGGATAT+AGG - chr1_2:5692439-5692458 Msa0051600:intron 25.0%
!!! ATGCTCATTGTTTTAAATTG+TGG - chr1_2:5692472-5692491 Msa0051600:three_prime_UTR 25.0%
! TTTCAATTATGGTTGTAGTT+AGG + chr1_2:5692585-5692604 None:intergenic 25.0%
!! TAAGCAATGGTTTTCAATTA+TGG + chr1_2:5692596-5692615 None:intergenic 25.0%
! TACATATGCCAAATATTTAG+AGG - chr1_2:5692838-5692857 Msa0051600:intron 25.0%
! AAAGTTTCTTATAAGCATAC+AGG - chr1_2:5693031-5693050 Msa0051600:intron 25.0%
! AAGTTTCTTATAAGCATACA+GGG - chr1_2:5693032-5693051 Msa0051600:intron 25.0%
!!! TTTTTTTTTGGCTTTCAAAC+CGG + chr1_2:5693157-5693176 None:intergenic 25.0%
!!! ATTTTTTGTTGGGAAATATG+AGG - chr1_2:5693491-5693510 Msa0051600:intron 25.0%
! AAATGAATGAAGGAAATATG+TGG - chr1_2:5693554-5693573 Msa0051600:intron 25.0%
! GATATAAAGTATAAGGTAAG+GGG + chr1_2:5693670-5693689 None:intergenic 25.0%
! GGATATAAAGTATAAGGTAA+GGG + chr1_2:5693671-5693690 None:intergenic 25.0%
! AGGATATAAAGTATAAGGTA+AGG + chr1_2:5693672-5693691 None:intergenic 25.0%
! TACCTTATACTTTATATCCT+TGG - chr1_2:5693672-5693691 Msa0051600:intron 25.0%
! ACCTTATACTTTATATCCTT+GGG - chr1_2:5693673-5693692 Msa0051600:intron 25.0%
!!! AAGAGTTGAAGTTTTAAGTT+TGG - chr1_2:5693918-5693937 Msa0051600:intron 25.0%
! GAATAATAACTCTTGAATGT+TGG - chr1_2:5693998-5694017 Msa0051600:intron 25.0%
! ACATTGTCTTTCCAATATTT+AGG - chr1_2:5694200-5694219 Msa0051600:CDS 25.0%
! CATTGTCTTTCCAATATTTA+GGG - chr1_2:5694201-5694220 Msa0051600:CDS 25.0%
! ATTGTCTTTCCAATATTTAG+GGG - chr1_2:5694202-5694221 Msa0051600:CDS 25.0%
! ATGCTTAAAGAAATTCTTGA+TGG + chr1_2:5694307-5694326 None:intergenic 25.0%
! TACTAGGAATTCTTTAATTG+TGG - chr1_2:5694463-5694482 Msa0051600:intron 25.0%
! AAAAAAGTCATTCCAGTTTA+TGG - chr1_2:5694594-5694613 Msa0051600:intron 25.0%
! AAAAAGTCATTCCAGTTTAT+GGG - chr1_2:5694595-5694614 Msa0051600:intron 25.0%
!!! TAATAGCAGTGACTTTTTTA+TGG - chr1_2:5694675-5694694 Msa0051600:intron 25.0%
!!! CTTCCTTTAACTTTTGAAAT+CGG - chr1_2:5694720-5694739 Msa0051600:intron 25.0%
!!! ATTTTAATTGATAGAGGATC+AGG - chr1_2:5694745-5694764 Msa0051600:intron 25.0%
!! TTTTCCATTTAAGCATTTTG+GGG + chr1_2:5694851-5694870 None:intergenic 25.0%
! ATGTAAGAAACTTGACAATA+GGG + chr1_2:5694915-5694934 None:intergenic 25.0%
! AATGTAAGAAACTTGACAAT+AGG + chr1_2:5694916-5694935 None:intergenic 25.0%
!! ATATTTGCTGCAACAAAAAA+TGG + chr1_2:5695079-5695098 None:intergenic 25.0%
! AAAATCCATAGCAATAAGTA+AGG + chr1_2:5695185-5695204 None:intergenic 25.0%
!! CTTATTGCTATGGATTTTAT+CGG - chr1_2:5695187-5695206 Msa0051600:CDS 25.0%
! TGAAGATTTCTTTCTTATTG+TGG - chr1_2:5695326-5695345 Msa0051600:CDS 25.0%
!!! TAATTTTTGAGACATTTGGT+TGG - chr1_2:5695428-5695447 Msa0051600:CDS 25.0%
ATAAGAAGAAGAAGATGAAG+AGG + chr1_2:5691731-5691750 None:intergenic 30.0%
GCAGTTATTAAGTGTTTGTT+TGG - chr1_2:5692044-5692063 Msa0051600:three_prime_UTR 30.0%
!! GCTTATTTCTATAAGGTATC+AGG - chr1_2:5692314-5692333 Msa0051600:intron 30.0%
ACACAATCATATAAGTGCTT+AGG + chr1_2:5692418-5692437 None:intergenic 30.0%
! AAATTTTATGGTCTCTGCAA+TGG - chr1_2:5692509-5692528 Msa0051600:CDS 30.0%
! AAGATCTGAAGGAATTTTGA+AGG - chr1_2:5692757-5692776 Msa0051600:CDS 30.0%
!! GAATTTTGAAGGATCTAGAA+TGG - chr1_2:5692768-5692787 Msa0051600:CDS 30.0%
CAAATATTTAGAGGAACTTG+CGG - chr1_2:5692847-5692866 Msa0051600:intron 30.0%
TAGAAATGGGAAAGAAACAA+AGG + chr1_2:5692884-5692903 None:intergenic 30.0%
CAGCAGTTATATGAGAAAAA+TGG + chr1_2:5692913-5692932 None:intergenic 30.0%
! CATTTTTCTCATATAACTGC+TGG - chr1_2:5692911-5692930 Msa0051600:intron 30.0%
! ACTTTTCCCATCTCTTAAAA+GGG - chr1_2:5692960-5692979 Msa0051600:intron 30.0%
AGGGAATCCAATCTATTTAT+AGG - chr1_2:5692979-5692998 Msa0051600:intron 30.0%
GGGAATCCAATCTATTTATA+GGG - chr1_2:5692980-5692999 Msa0051600:intron 30.0%
AAAGCTCCCTATAAATAGAT+TGG + chr1_2:5692989-5693008 None:intergenic 30.0%
! CTATTTATAGGGAGCTTTTA+TGG - chr1_2:5692991-5693010 Msa0051600:intron 30.0%
AGTTTCTTATAAGCATACAG+GGG - chr1_2:5693033-5693052 Msa0051600:intron 30.0%
ATTGTTTAACAATCAAGGTG+TGG - chr1_2:5693233-5693252 Msa0051600:intron 30.0%
ACTCTAGACATATGGTTAAA+GGG + chr1_2:5693280-5693299 None:intergenic 30.0%
AACTCTAGACATATGGTTAA+AGG + chr1_2:5693281-5693300 None:intergenic 30.0%
TTTCTTGTGGGTATTTGATT+TGG + chr1_2:5693418-5693437 None:intergenic 30.0%
! AGATGTGCAATTTTTCTTGT+GGG + chr1_2:5693430-5693449 None:intergenic 30.0%
! TAGATGTGCAATTTTTCTTG+TGG + chr1_2:5693431-5693450 None:intergenic 30.0%
CCTTATACTTTATATCCTTG+GGG - chr1_2:5693674-5693693 Msa0051600:intron 30.0%
! CTTTTTCTCAATCTCACTTA+TGG + chr1_2:5693839-5693858 None:intergenic 30.0%
! AATCACGAAGAATTTTGTGT+GGG - chr1_2:5694044-5694063 Msa0051600:intron 30.0%
!! TCACCGATTTCAAAAGTTAA+AGG + chr1_2:5694726-5694745 None:intergenic 30.0%
!!! TCGGTGATTTTAATTGATAG+AGG - chr1_2:5694739-5694758 Msa0051600:intron 30.0%
!! TATGTATGTCACTTTACGAT+TGG + chr1_2:5694817-5694836 None:intergenic 30.0%
! TTTCCATTTAAGCATTTTGG+GGG + chr1_2:5694850-5694869 None:intergenic 30.0%
!!! TGATTGCATTATTTTTGGTC+TGG - chr1_2:5694936-5694955 Msa0051600:intron 30.0%
TGCAACTATAAATTGTGTAG+TGG - chr1_2:5694967-5694986 Msa0051600:intron 30.0%
ATTGAATTGCCATAAATGTG+AGG + chr1_2:5695115-5695134 None:intergenic 30.0%
ATTTGCCTTACTTATTGCTA+TGG - chr1_2:5695177-5695196 Msa0051600:CDS 30.0%
TCAGTAATACTGCAATATCA+TGG + chr1_2:5695309-5695328 None:intergenic 30.0%
ATAGTGCAAGTAGGAAATAA+TGG + chr1_2:5695352-5695371 None:intergenic 30.0%
CAAACTACAGAGAACTTAAA+TGG + chr1_2:5695396-5695415 None:intergenic 30.0%
!!! CGAGTAATTTTTGAGACATT+TGG - chr1_2:5695424-5695443 Msa0051600:CDS 30.0%
AATTACATGTGAAGTTTCTG+TGG + chr1_2:5695457-5695476 None:intergenic 30.0%
! AAGAAAATGATGACGCTTAT+AGG - chr1_2:5695505-5695524 Msa0051600:CDS 30.0%
AGAAATTACAGTAAAGACTG+AGG + chr1_2:5695563-5695582 None:intergenic 30.0%
GAGAATGATGATTCTTCTTC+TGG + chr1_2:5691677-5691696 None:intergenic 35.0%
! TTTCTTTTTCTAACCAACGG+TGG + chr1_2:5691754-5691773 None:intergenic 35.0%
! CGGTTTCTTTTTCTAACCAA+CGG + chr1_2:5691757-5691776 None:intergenic 35.0%
AACAGAAGTGGTATTGTTGA+CGG + chr1_2:5691869-5691888 None:intergenic 35.0%
AGGTTAAAAATAGCGTTTCG+AGG - chr1_2:5692107-5692126 Msa0051600:intron 35.0%
AGAGCTTGTAGAATAAGCAA+TGG + chr1_2:5692609-5692628 None:intergenic 35.0%
ATACTTGAGGAAAACTGGAT+TGG - chr1_2:5692733-5692752 Msa0051600:CDS 35.0%
TATTTGGCATATGTAGTACC+AGG + chr1_2:5692833-5692852 None:intergenic 35.0%
CGCAAGTTCCTCTAAATATT+TGG + chr1_2:5692849-5692868 None:intergenic 35.0%
TTTAAGAGATGGGAAAAGTG+AGG + chr1_2:5692959-5692978 None:intergenic 35.0%
! CACTTTTCCCATCTCTTAAA+AGG - chr1_2:5692959-5692978 Msa0051600:intron 35.0%
!! TGGATTCCCTTTTAAGAGAT+GGG + chr1_2:5692969-5692988 None:intergenic 35.0%
!! TTGGATTCCCTTTTAAGAGA+TGG + chr1_2:5692970-5692989 None:intergenic 35.0%
GTTTCTTATAAGCATACAGG+GGG - chr1_2:5693034-5693053 Msa0051600:intron 35.0%
! ATATGTCTAGAGTTCGAATC+CGG - chr1_2:5693287-5693306 Msa0051600:intron 35.0%
!! TTTAATCCTGATGATGGGAA+TGG - chr1_2:5693345-5693364 Msa0051600:intron 35.0%
GAAATATGAGGAACAAGAGA+AGG - chr1_2:5693503-5693522 Msa0051600:intron 35.0%
GAACAAGAGTGAAGTAGAAT+GGG - chr1_2:5693525-5693544 Msa0051600:intron 35.0%
CCCCAAGGATATAAAGTATA+AGG + chr1_2:5693677-5693696 None:intergenic 35.0%
AGTCTTGAGGTTTAACTGTT+TGG - chr1_2:5693700-5693719 Msa0051600:intron 35.0%
! GTAAGCTAAATCTTGAGTTG+TGG + chr1_2:5693894-5693913 None:intergenic 35.0%
CTTAAAACTTCAACTCTTCG+AGG + chr1_2:5693916-5693935 None:intergenic 35.0%
TCTTGAATGTTGGATCAGTA+AGG - chr1_2:5694008-5694027 Msa0051600:intron 35.0%
CTTGAATGTTGGATCAGTAA+GGG - chr1_2:5694009-5694028 Msa0051600:intron 35.0%
! CAATCACGAAGAATTTTGTG+TGG - chr1_2:5694043-5694062 Msa0051600:intron 35.0%
AGATATTAGGAGAATGAGCA+AGG - chr1_2:5694118-5694137 Msa0051600:intron 35.0%
AGAATGAGCAAGGTAATTGT+AGG - chr1_2:5694128-5694147 Msa0051600:intron 35.0%
TCTTTCCAATATTTAGGGGT+GGG - chr1_2:5694206-5694225 Msa0051600:CDS 35.0%
!!! GTCATTCTGTTGTTGCTTTT+AGG - chr1_2:5694327-5694346 Msa0051600:CDS 35.0%
! GTTGTAATTTGTGCAGCATT+GGG - chr1_2:5694537-5694556 Msa0051600:intron 35.0%
! TTGTAATTTGTGCAGCATTG+GGG - chr1_2:5694538-5694557 Msa0051600:intron 35.0%
CGTCTGATCATCTTATAAAG+AGG - chr1_2:5694628-5694647 Msa0051600:intron 35.0%
TGATCATCTTATAAAGAGGC+CGG - chr1_2:5694632-5694651 Msa0051600:intron 35.0%
TAATTGATAGAGGATCAGGA+AGG - chr1_2:5694749-5694768 Msa0051600:intron 35.0%
AATTGATAGAGGATCAGGAA+GGG - chr1_2:5694750-5694769 Msa0051600:intron 35.0%
! TTCCATTTAAGCATTTTGGG+GGG + chr1_2:5694849-5694868 None:intergenic 35.0%
! ATAATTTTTCCAAAGCTGCC+AGG - chr1_2:5695133-5695152 Msa0051600:CDS 35.0%
! TAATTTTTCCAAAGCTGCCA+GGG - chr1_2:5695134-5695153 Msa0051600:CDS 35.0%
AATCCATAACAGATGTAACC+TGG + chr1_2:5695160-5695179 None:intergenic 35.0%
TTCATTAGAGTCTAGAGATG+TGG - chr1_2:5695237-5695256 Msa0051600:CDS 35.0%
! TTCCTACTTGCACTATTTTG+TGG - chr1_2:5695356-5695375 Msa0051600:CDS 35.0%
!! TTCTTTTTGACTGAAAGCAC+CGG + chr1_2:5695490-5695509 None:intergenic 35.0%
! CTGAGGTGCTAATTGTAAAA+TGG + chr1_2:5695546-5695565 None:intergenic 35.0%
TTCTGTATTGTAGCTGTTCT+AGG - chr1_2:5695579-5695598 Msa0051600:five_prime_UTR 35.0%
TTCTTCTTCTTATCCACCGT+TGG - chr1_2:5691738-5691757 Msa0051600:three_prime_UTR 40.0%
! CAGGGTAAAGTTTTCGATAG+CGG + chr1_2:5691777-5691796 None:intergenic 40.0%
GTCTTCTACTACAACAGAAG+TGG + chr1_2:5691881-5691900 None:intergenic 40.0%
GTTGTAGTAGAAGACTGTGA+AGG - chr1_2:5691886-5691905 Msa0051600:three_prime_UTR 40.0%
ACGTGGTATCCTTCTATGAA+AGG - chr1_2:5691922-5691941 Msa0051600:three_prime_UTR 40.0%
CGAAGAAAGCCTTTCATAGA+AGG + chr1_2:5691934-5691953 None:intergenic 40.0%
GAAAGGCTTTCTTCGATTCT+TGG - chr1_2:5691939-5691958 Msa0051600:three_prime_UTR 40.0%
!! CGAACGCATTGTTGATGATT+CGG - chr1_2:5691990-5692009 Msa0051600:three_prime_UTR 40.0%
!! AAGCACTTCTGAGACTGTTT+GGG - chr1_2:5692252-5692271 Msa0051600:intron 40.0%
GAATTGCAGATGCATACTTG+AGG - chr1_2:5692720-5692739 Msa0051600:CDS 40.0%
GATGCATACTTGAGGAAAAC+TGG - chr1_2:5692728-5692747 Msa0051600:CDS 40.0%
! ACTGGATTGGAAAGATCTGA+AGG - chr1_2:5692746-5692765 Msa0051600:CDS 40.0%
! GAAGGATCTAGAATGGTTGA+AGG - chr1_2:5692775-5692794 Msa0051600:intron 40.0%
CTAGAATGGTTGAAGGAACA+AGG - chr1_2:5692782-5692801 Msa0051600:intron 40.0%
TATGTAGTACCAGGTGAACT+TGG + chr1_2:5692824-5692843 None:intergenic 40.0%
GTACCTGCTTTGTAATAACC+TGG + chr1_2:5692937-5692956 None:intergenic 40.0%
GGATTCGAACTCTAGACATA+TGG + chr1_2:5693288-5693307 None:intergenic 40.0%
GGAACAAGAGTGAAGTAGAA+TGG - chr1_2:5693524-5693543 Msa0051600:intron 40.0%
AAGAGTGAAGTAGAATGGGA+AGG - chr1_2:5693529-5693548 Msa0051600:intron 40.0%
AGAGTGAAGTAGAATGGGAA+GGG - chr1_2:5693530-5693549 Msa0051600:intron 40.0%
TGGGAAGGGAAAATGAATGA+AGG - chr1_2:5693544-5693563 Msa0051600:intron 40.0%
! TTAATCTGGGAATGGACTCA+TGG + chr1_2:5693729-5693748 None:intergenic 40.0%
GTCTTTCCAATATTTAGGGG+TGG - chr1_2:5694205-5694224 Msa0051600:CDS 40.0%
GATTTCCCACCCCTAAATAT+TGG + chr1_2:5694214-5694233 None:intergenic 40.0%
TCTGATTCAGAGTTCACTAC+AGG + chr1_2:5694236-5694255 None:intergenic 40.0%
TGAACTCTGAATCAGACCTA+AGG - chr1_2:5694240-5694259 Msa0051600:CDS 40.0%
TTAGGTATCTGAAAAGCTCC+TGG - chr1_2:5694345-5694364 Msa0051600:CDS 40.0%
! GGTTGTAATTTGTGCAGCAT+TGG - chr1_2:5694536-5694555 Msa0051600:intron 40.0%
GAACAATCTGTCCCATAAAC+TGG + chr1_2:5694609-5694628 None:intergenic 40.0%
!! TCCATTTAAGCATTTTGGGG+GGG + chr1_2:5694848-5694867 None:intergenic 40.0%
!!! GCGACACTCGAACATTTTTT+AGG + chr1_2:5695008-5695027 None:intergenic 40.0%
! TGGATTTTATCGGTATAGCC+AGG - chr1_2:5695197-5695216 Msa0051600:CDS 40.0%
! ATTTTATCGGTATAGCCAGG+TGG - chr1_2:5695200-5695219 Msa0051600:CDS 40.0%
AGCCACAAAATAGTGCAAGT+AGG + chr1_2:5695361-5695380 None:intergenic 40.0%
CATGGTTGTTGCAGTTGAGT+GGG + chr1_2:5691604-5691623 None:intergenic 45.0%
!! AGTGTTGATGATGGTGGGAA+TGG + chr1_2:5691631-5691650 None:intergenic 45.0%
!! TGGGAAGTGTTGATGATGGT+GGG + chr1_2:5691636-5691655 None:intergenic 45.0%
!! TTGGGAAGTGTTGATGATGG+TGG + chr1_2:5691637-5691656 None:intergenic 45.0%
!! CGATTGGGAAGTGTTGATGA+TGG + chr1_2:5691640-5691659 None:intergenic 45.0%
GTGTTGAAGCGTGTTCGATT+GGG + chr1_2:5691655-5691674 None:intergenic 45.0%
CGCTATCGAAAACTTTACCC+TGG - chr1_2:5691775-5691794 Msa0051600:three_prime_UTR 45.0%
TTTGTCGCTGTGGAGTTTCA+TGG + chr1_2:5691839-5691858 None:intergenic 45.0%
AGTGGTATTGTTGACGGTGT+TGG + chr1_2:5691863-5691882 None:intergenic 45.0%
TAGAAGGATACCACGTGTCA+GGG + chr1_2:5691918-5691937 None:intergenic 45.0%
ATAGAAGGATACCACGTGTC+AGG + chr1_2:5691919-5691938 None:intergenic 45.0%
!! CAAGCACTTCTGAGACTGTT+TGG - chr1_2:5692251-5692270 Msa0051600:intron 45.0%
GGCTGATGAGGTTGAAATTG+CGG + chr1_2:5692543-5692562 None:intergenic 45.0%
ATTCCCAATCCAAGTTCACC+TGG - chr1_2:5692812-5692831 Msa0051600:intron 45.0%
GTACCAGGTGAACTTGGATT+GGG + chr1_2:5692818-5692837 None:intergenic 45.0%
AGTACCAGGTGAACTTGGAT+TGG + chr1_2:5692819-5692838 None:intergenic 45.0%
TTCTCATATAACTGCTGGCC+AGG - chr1_2:5692916-5692935 Msa0051600:intron 45.0%
TGGCCAGGTTATTACAAAGC+AGG - chr1_2:5692931-5692950 Msa0051600:intron 45.0%
TAAGCATACAGGGGGAATAC+CGG - chr1_2:5693042-5693061 Msa0051600:intron 45.0%
TTCCCAGGAGGAACAACATT+TGG - chr1_2:5693071-5693090 Msa0051600:intron 45.0%
TAGAGTTCGAATCCGGATGA+TGG - chr1_2:5693294-5693313 Msa0051600:intron 45.0%
AGAGTTCGAATCCGGATGAT+GGG - chr1_2:5693295-5693314 Msa0051600:intron 45.0%
!! ATCCTTGGGGATTAGTCTTG+AGG - chr1_2:5693687-5693706 Msa0051600:intron 45.0%
AACCTCAAGACTAATCCCCA+AGG + chr1_2:5693692-5693711 None:intergenic 45.0%
GTATCTGAAAAGCTCCTGGA+AGG - chr1_2:5694349-5694368 Msa0051600:CDS 45.0%
TGAAAAGCTCCTGGAAGGTA+AGG - chr1_2:5694354-5694373 Msa0051600:CDS 45.0%
CAAATGGGAAGGAGATGTAC+AGG - chr1_2:5694390-5694409 Msa0051600:CDS 45.0%
GCTTGCAGAGGTAGATTACT+AGG - chr1_2:5694447-5694466 Msa0051600:intron 45.0%
! AATTTGTGCAGCATTGGGGT+CGG - chr1_2:5694542-5694561 Msa0051600:intron 45.0%
TCATCTTATAAAGAGGCCGG+TGG - chr1_2:5694635-5694654 Msa0051600:intron 45.0%
CATCTTATAAAGAGGCCGGT+GGG - chr1_2:5694636-5694655 Msa0051600:intron 45.0%
!! CATTTAAGCATTTTGGGGGG+GGG + chr1_2:5694846-5694865 None:intergenic 45.0%
!! CCATTTAAGCATTTTGGGGG+GGG + chr1_2:5694847-5694866 None:intergenic 45.0%
! ATGTTCGAGTGTCGCTATGT+AGG - chr1_2:5695013-5695032 Msa0051600:intron 45.0%
! GAGTGTCGCTATGTAGGATA+GGG - chr1_2:5695019-5695038 Msa0051600:intron 45.0%
! AGTGTCGCTATGTAGGATAG+GGG - chr1_2:5695020-5695039 Msa0051600:intron 45.0%
GTTGTCACGCCTCACATTTA+TGG - chr1_2:5695103-5695122 Msa0051600:intron 45.0%
AACGAAATTGTCACTCCACC+TGG + chr1_2:5695218-5695237 None:intergenic 45.0%
CCATGGTTGTTGCAGTTGAG+TGG + chr1_2:5691605-5691624 None:intergenic 50.0%
CCACTCAACTGCAACAACCA+TGG - chr1_2:5691602-5691621 Msa0051600:three_prime_UTR 50.0%
!! GATGGTGGGAATGGTAACCA+TGG + chr1_2:5691622-5691641 None:intergenic 50.0%
! GGTGTTGAAGCGTGTTCGAT+TGG + chr1_2:5691656-5691675 None:intergenic 50.0%
CTTTACCCTGGTGAAACCAC+CGG - chr1_2:5691787-5691806 Msa0051600:three_prime_UTR 50.0%
TGATTCCGGTGGTTTCACCA+GGG + chr1_2:5691795-5691814 None:intergenic 50.0%
CCTCATCTCTTCGGTGATTC+CGG + chr1_2:5691809-5691828 None:intergenic 50.0%
GGCAACGAACCTCATCTCTT+CGG + chr1_2:5691818-5691837 None:intergenic 50.0%
AAGGACAAATCCCTGACACG+TGG - chr1_2:5691905-5691924 Msa0051600:three_prime_UTR 50.0%
!! AGTCTCAGAAGTGCTTGCGT+CGG + chr1_2:5692248-5692267 None:intergenic 50.0%
CCTTTGTATTGCGGCTGATG+AGG + chr1_2:5692555-5692574 None:intergenic 50.0%
CCTCATCAGCCGCAATACAA+AGG - chr1_2:5692552-5692571 Msa0051600:CDS 50.0%
GGCTGTGAGCCTTTGTATTG+CGG + chr1_2:5692564-5692583 None:intergenic 50.0%
AAGCATACAGGGGGAATACC+GGG - chr1_2:5693043-5693062 Msa0051600:intron 50.0%
GGCCAAATGTTGTTCCTCCT+GGG + chr1_2:5693076-5693095 None:intergenic 50.0%
TGGCCAAATGTTGTTCCTCC+TGG + chr1_2:5693077-5693096 None:intergenic 50.0%
ATTAGTCGCCCACCATTGGT+GGG - chr1_2:5693124-5693143 Msa0051600:intron 50.0%
!! TCGAATCCGGATGATGGGAA+TGG - chr1_2:5693300-5693319 Msa0051600:intron 50.0%
GCATCTCCATTCCCATCATC+CGG + chr1_2:5693309-5693328 None:intergenic 50.0%
GCATCTCCATTCCCATCATC+AGG + chr1_2:5693309-5693328 None:intergenic 50.0%
AGGAGCTGGAGTTCTGCAAA+TGG - chr1_2:5694374-5694393 Msa0051600:CDS 50.0%
GGAGCTGGAGTTCTGCAAAT+GGG - chr1_2:5694375-5694394 Msa0051600:CDS 50.0%
CTGGAGTTCTGCAAATGGGA+AGG - chr1_2:5694379-5694398 Msa0051600:CDS 50.0%
GAAGCTTAACGTGCTTGCAG+AGG - chr1_2:5694435-5694454 Msa0051600:intron 50.0%
! ATTTGTGCAGCATTGGGGTC+GGG - chr1_2:5694543-5694562 Msa0051600:intron 50.0%
CCAAAAAACAGAGAGCCCAC+CGG + chr1_2:5694654-5694673 None:intergenic 50.0%
CCCCCCCCAAAATGCTTAAA+TGG - chr1_2:5694844-5694863 Msa0051600:intron 50.0%
! CGAGTGTCGCTATGTAGGAT+AGG - chr1_2:5695018-5695037 Msa0051600:intron 50.0%
! GTGTCGCTATGTAGGATAGG+GGG - chr1_2:5695021-5695040 Msa0051600:intron 50.0%
TGTCGCTATGTAGGATAGGG+GGG - chr1_2:5695022-5695041 Msa0051600:intron 50.0%
!! TGGGAGCGTTAACTGTAGCT+TGG - chr1_2:5695050-5695069 Msa0051600:intron 50.0%
TAACAGATGTAACCTGGCCC+TGG + chr1_2:5695154-5695173 None:intergenic 50.0%
GGGCCAGGTTACATCTGTTA+TGG - chr1_2:5695154-5695173 Msa0051600:CDS 50.0%
GTCTAGAGATGTGGCTTAGC+TGG - chr1_2:5695246-5695265 Msa0051600:CDS 50.0%
GTGATTCCGGTGGTTTCACC+AGG + chr1_2:5691796-5691815 None:intergenic 55.0%
CATCTCTTCGGTGATTCCGG+TGG + chr1_2:5691806-5691825 None:intergenic 55.0%
CCGGAATCACCGAAGAGATG+AGG - chr1_2:5691806-5691825 Msa0051600:three_prime_UTR 55.0%
!!! CGGTGTTGGTTTTGTCGCTG+TGG + chr1_2:5691849-5691868 None:intergenic 55.0%
GAATACCGGGTTCGATTCCC+AGG - chr1_2:5693056-5693075 Msa0051600:intron 55.0%
TTCCTCCTGGGAATCGAACC+CGG + chr1_2:5693064-5693083 None:intergenic 55.0%
CTAATCCGGCTCATGCGTAG+AGG + chr1_2:5693109-5693128 None:intergenic 55.0%
!! CCAATGGTGGGCGACTAATC+CGG + chr1_2:5693123-5693142 None:intergenic 55.0%
! GATTAGTCGCCCACCATTGG+TGG - chr1_2:5693123-5693142 Msa0051600:intron 55.0%
GTTTCCGACCCACCAATGGT+GGG + chr1_2:5693135-5693154 None:intergenic 55.0%
! ACCATTGGTGGGTCGGAAAC+CGG - chr1_2:5693135-5693154 Msa0051600:intron 55.0%
ACTCCAGCTCCTTACCTTCC+AGG + chr1_2:5694366-5694385 None:intergenic 55.0%
!!! CCGGTGGGCTCTCTGTTTTT+TGG - chr1_2:5694651-5694670 Msa0051600:intron 55.0%
TGTAGGATAGGGGGGCAGTT+TGG - chr1_2:5695030-5695049 Msa0051600:intron 55.0%
GTAGGATAGGGGGGCAGTTT+GGG - chr1_2:5695031-5695050 Msa0051600:intron 55.0%
TACCGGGTTCGATTCCCAGG+AGG - chr1_2:5693059-5693078 Msa0051600:intron 60.0%
! ATGCGTAGAGGCATGCGCAC+TGG + chr1_2:5693097-5693116 None:intergenic 60.0%
GCATGCCTCTACGCATGAGC+CGG - chr1_2:5693101-5693120 Msa0051600:intron 60.0%
!! CCGGATTAGTCGCCCACCAT+TGG - chr1_2:5693120-5693139 Msa0051600:intron 60.0%
GGTTTCCGACCCACCAATGG+TGG + chr1_2:5693136-5693155 None:intergenic 60.0%
! ACCGGTTTCCGACCCACCAA+TGG + chr1_2:5693139-5693158 None:intergenic 60.0%
GCTCCTGGAAGGTAAGGAGC+TGG - chr1_2:5694360-5694379 Msa0051600:CDS 60.0%
TTTCCAAAGCTGCCAGGGCC+AGG - chr1_2:5695139-5695158 Msa0051600:CDS 60.0%
TAACCTGGCCCTGGCAGCTT+TGG + chr1_2:5695145-5695164 None:intergenic 60.0%
! GTCGCCCACCATTGGTGGGT+CGG - chr1_2:5693128-5693147 Msa0051600:intron 65.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 5691493 5695647 5691493 ID=Msa0051600;Name=Msa0051600
chr1_2 mRNA 5691493 5695647 5691493 ID=Msa0051600-mRNA-1;Parent=Msa0051600;Name=Msa0051600-mRNA-1;_AED=0.07;_eAED=0.07;_QI=90|1|1|1|0.75|0.6|5|664|288
chr1_2 exon 5691493 5692105 5691493 ID=Msa0051600-mRNA-1:exon:1800;Parent=Msa0051600-mRNA-1
chr1_2 exon 5692444 5692587 5692444 ID=Msa0051600-mRNA-1:exon:1799;Parent=Msa0051600-mRNA-1
chr1_2 exon 5692684 5692791 5692684 ID=Msa0051600-mRNA-1:exon:1798;Parent=Msa0051600-mRNA-1
chr1_2 exon 5694188 5694411 5694188 ID=Msa0051600-mRNA-1:exon:1797;Parent=Msa0051600-mRNA-1
chr1_2 exon 5695116 5695647 5695116 ID=Msa0051600-mRNA-1:exon:1796;Parent=Msa0051600-mRNA-1
chr1_2 five_prime_UTR 5695558 5695647 5695558 ID=Msa0051600-mRNA-1:five_prime_utr;Parent=Msa0051600-mRNA-1
chr1_2 CDS 5695116 5695557 5695116 ID=Msa0051600-mRNA-1:cds;Parent=Msa0051600-mRNA-1
chr1_2 CDS 5694188 5694411 5694188 ID=Msa0051600-mRNA-1:cds;Parent=Msa0051600-mRNA-1
chr1_2 CDS 5692684 5692791 5692684 ID=Msa0051600-mRNA-1:cds;Parent=Msa0051600-mRNA-1
chr1_2 CDS 5692495 5692587 5692495 ID=Msa0051600-mRNA-1:cds;Parent=Msa0051600-mRNA-1
chr1_2 three_prime_UTR 5692444 5692494 5692444 ID=Msa0051600-mRNA-1:three_prime_utr;Parent=Msa0051600-mRNA-1
chr1_2 three_prime_UTR 5691493 5692105 5691493 ID=Msa0051600-mRNA-1:three_prime_utr;Parent=Msa0051600-mRNA-1
Gene Sequence

>Msa0051600

ATGTTGTTAACAGCGAAACCCACTCAACTGCAACAACCATGGTTACCATTCCCACCATCATCAACACTTCCCAATCGAACACGCTTCAACACCAGAAGAAGAATCATCATTCTCAACAACAGCAACGAAAACAACAATAGTAACTCCTCTTCATCTTCTTCTTCTTATCCACCGTTGGTTAGAAAAAGAAACCGCTATCGAAAACTTTACCCTGGTGAAACCACCGGAATCACCGAAGAGATGAGGTTCGTTGCCATGAAACTCCACAGCGACAAAACCAACACCGTCAACAATACCACTTCTGTTGTAGTAGAAGACTGTGAAGGACAAATCCCTGACACGTGGTATCCTTCTATGAAAGGCTTTCTTCGATTCTTGGTTGATAATCAACTAGTTTTTGCTACACTCGAACGCATTGTTGATGATTCGGATAATGTTTCATATGCATACTTGAGGAAAACTGGATTGGAAAGATCTGAAGGAATTTTGAAGGATCTAGAATGGTTGAAGGAACAAGGTGTTGAGATTCCCAATCCAAGTTCACCTGGTACTACATATGCCAAATATTTAGAGGAACTTGCGGAAAGAAGCGCACCTTTGTTTCTTTCCCATTTCTACAATATCCATTTTTCTCATATAACTGCTGGCCAGGTTATTACAAAGCAGGTATCTGAAAAGCTCCTGGAAGGTAAGGAGCTGGAGTTCTGCAAATGGGAAGGAGATGTACAGGAAATGCTGAAAGATGTACGTGAGAAGCTTAACGTGCTTGCAGAGCATTGGGGTCGGGATGAGAAAAATAAATGTTTAAGAGAAACAAAAAAGTCATTCCAGTTTATGGGACAGATTGTTCGTCTGATCATCTTATAA

Protein sequence

>Msa0051600

MLLTAKPTQLQQPWLPFPPSSTLPNRTRFNTRRRIIILNNSNENNNSNSSSSSSSYPPLVRKRNRYRKLYPGETTGITEEMRFVAMKLHSDKTNTVNNTTSVVVEDCEGQIPDTWYPSMKGFLRFLVDNQLVFATLERIVDDSDNVSYAYLRKTGLERSEGILKDLEWLKEQGVEIPNPSSPGTTYAKYLEELAERSAPLFLSHFYNIHFSHITAGQVITKQVSEKLLEGKELEFCKWEGDVQEMLKDVREKLNVLAEHWGRDEKNKCLRETKKSFQFMGQIVRLIIL*