Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1366730 | XP_024638363.1 | 96.667 | 420 | 4 | 1 | 1 | 410 | 1 | 420 | 0.0 | 805 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1366730 | sp|Q93YR3|F10AL_ARATH | 78.369 | 282 | 53 | 2 | 1 | 274 | 1 | 282 | 2.00e-138 | 405 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1366730 | A0A396ICN8 | 96.667 | 420 | 4 | 1 | 1 | 410 | 1 | 420 | 0.0 | 805 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0032780 | Msa1366730 | 0.827723 | 1.336685e-54 | -8.615850e-47 |
| Msa1351920 | Msa1366730 | -0.832904 | 7.242822e-56 | -8.615850e-47 |
| Msa0748350 | Msa1366730 | 0.806433 | 8.246617e-50 | -8.615850e-47 |
| Msa1258180 | Msa1366730 | 0.818728 | 1.684994e-52 | -8.615850e-47 |
| Msa0473600 | Msa1366730 | 0.803028 | 4.237324e-49 | -8.615850e-47 |
| Msa1040170 | Msa1366730 | -0.818294 | 2.112613e-52 | -8.615850e-47 |
| Msa1083360 | Msa1366730 | -0.829691 | 4.467239e-55 | -8.615850e-47 |
| Msa0342860 | Msa1366730 | -0.815383 | 9.506781e-52 | -8.615850e-47 |
| Msa1128110 | Msa1366730 | -0.800280 | 1.551765e-48 | -8.615850e-47 |
| Msa1165640 | Msa1366730 | 0.800238 | 1.583217e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1366730 | MtrunA17_Chr4g0057051 | 96.667 | 420 | 4 | 1 | 1 | 410 | 1 | 420 | 0.0 | 805 |
| Msa1366730 | MtrunA17_Chr8g0393201 | 49.609 | 256 | 83 | 3 | 1 | 256 | 1 | 210 | 6.17e-74 | 234 |
| Msa1366730 | MtrunA17_Chr3g0097231 | 42.045 | 88 | 51 | 0 | 119 | 206 | 15 | 102 | 1.34e-12 | 69.3 |
| Msa1366730 | MtrunA17_Chr5g0398901 | 37.209 | 86 | 54 | 0 | 118 | 203 | 5 | 90 | 2.46e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1366730 | AT4G22670.1 | 78.369 | 282 | 53 | 2 | 1 | 274 | 1 | 282 | 2.03e-139 | 405 |
| Msa1366730 | AT3G17880.1 | 61.069 | 262 | 91 | 4 | 5 | 263 | 6 | 259 | 6.34e-102 | 308 |
| Msa1366730 | AT3G17880.2 | 60.687 | 262 | 85 | 4 | 5 | 263 | 6 | 252 | 3.38e-101 | 305 |
| Msa1366730 | AT2G42810.1 | 38.636 | 88 | 54 | 0 | 119 | 206 | 17 | 104 | 3.64e-11 | 65.1 |
| Msa1366730 | AT2G42810.5 | 38.636 | 88 | 54 | 0 | 119 | 206 | 17 | 104 | 3.64e-11 | 65.1 |
| Msa1366730 | AT2G42810.4 | 38.636 | 88 | 54 | 0 | 119 | 206 | 17 | 104 | 3.64e-11 | 65.1 |
| Msa1366730 | AT2G42810.3 | 38.636 | 88 | 54 | 0 | 119 | 206 | 17 | 104 | 4.26e-11 | 65.1 |
| Msa1366730 | AT2G42810.2 | 38.636 | 88 | 54 | 0 | 119 | 206 | 17 | 104 | 4.30e-11 | 65.1 |
| Msa1366730 | AT1G62740.1 | 37.209 | 86 | 54 | 0 | 118 | 203 | 5 | 90 | 7.18e-11 | 64.3 |
Find 143 sgRNAs with CRISPR-Local
Find 464 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAGGTGGCTTCCCTGGTGC+TGG | 0.194659 | tig0018481:+79948 | Msa1366730:CDS |
| TATGAAGAACCCTGCTAATT+TGG | 0.198090 | tig0018481:+81450 | Msa1366730:CDS |
| GCGAAAATGATGAGCAAATT+TGG | 0.207129 | tig0018481:+81511 | Msa1366730:CDS |
| GTTTGTGATTTCAGCATTCT+AGG | 0.213667 | tig0018481:+81571 | Msa1366730:three_prime_UTR |
| GGCATGCCTGGTGGGTTTCC+TGG | 0.235776 | tig0018481:+79828 | Msa1366730:CDS |
| GGCATGCCTGGTGGGTTTCC+TGG | 0.238441 | tig0018481:+79804 | Msa1366730:CDS |
| TTCCTTCTTCCGCGACTATC+TGG | 0.260079 | tig0018481:+75918 | Msa1366730:CDS |
| GGGTTTCCTGGTGGCATGCC+TGG | 0.279568 | tig0018481:+79816 | Msa1366730:CDS |
| GGGTTTCCTGGTGGCATGCC+AGG | 0.297533 | tig0018481:+79840 | Msa1366730:CDS |
| CCTGGAGCTGGAGGCATGCC+TGG | 0.308667 | tig0018481:+79870 | Msa1366730:CDS |
| ACCTCTGTTCGCATACATTA+TGG | 0.308744 | tig0018481:-77783 | None:intergenic |
| CAGGTGGCTTCCCTGGTGCT+GGG | 0.313910 | tig0018481:+79949 | Msa1366730:CDS |
| TCCTCAAGCTTGTGGGCATT+TGG | 0.324473 | tig0018481:-79538 | None:intergenic |
| TTGTATCCTTTAGCAGAATC+AGG | 0.328841 | tig0018481:-78625 | None:intergenic |
| TGATGCAAATGCTGCTTTAG+AGG | 0.329748 | tig0018481:+77948 | Msa1366730:CDS |
| CTAAATGCCGTCATCAAATC+AGG | 0.329807 | tig0018481:-80613 | None:intergenic |
| GGCATGCCAGGTGGGTTCCC+TGG | 0.337993 | tig0018481:+79852 | Msa1366730:CDS |
| CCAGGTGGCTTCCCTGGAGC+TGG | 0.339840 | tig0018481:+79918 | Msa1366730:CDS |
| CCAGGTGGGTTCCCTGGAGC+TGG | 0.341795 | tig0018481:+79858 | Msa1366730:CDS |
| CCTGGAGCTGGAGGCATGCC+AGG | 0.350872 | tig0018481:+79930 | Msa1366730:CDS |
| GGCATGCCAGGTGGCTTCCC+TGG | 0.351676 | tig0018481:+79912 | Msa1366730:CDS |
| GGTTTGGAATAAGCAGATTC+AGG | 0.357783 | tig0018481:-76048 | None:intergenic |
| TAGTCGTTATCCTTCTGTTA+AGG | 0.357845 | tig0018481:+81751 | Msa1366730:three_prime_UTR |
| GCATCACGGATTGCAGCATT+AGG | 0.364661 | tig0018481:-77931 | None:intergenic |
| CCTGGAGCTGGAGGCATGCC+AGG | 0.371236 | tig0018481:+79900 | Msa1366730:CDS |
| TTCCTGGTGGCATGCCTGGT+GGG | 0.372208 | tig0018481:+79820 | Msa1366730:CDS |
| CCTGGTGGTTTCCCTGGAGC+TGG | 0.372597 | tig0018481:+79888 | Msa1366730:CDS |
| TTGCTAAAATCAACATTTCC+AGG | 0.373233 | tig0018481:-79990 | None:intergenic |
| GGCATGCCAGGAGGGGTGCC+TGG | 0.379056 | tig0018481:+79972 | Msa1366730:CDS |
| GGCATGCCTGGTGGTTTCCC+TGG | 0.382813 | tig0018481:+79882 | Msa1366730:CDS |
| AGTCGTTATCCTTCTGTTAA+GGG | 0.383624 | tig0018481:+81752 | Msa1366730:three_prime_UTR |
| TGAAGAGCAGCCATAACTTC+TGG | 0.397339 | tig0018481:-80640 | None:intergenic |
| CCTGGCATGCCTCCAGCTCC+AGG | 0.401023 | tig0018481:-79900 | None:intergenic |
| CCTGGCATGCCTCCAGCTCC+AGG | 0.401023 | tig0018481:-79930 | None:intergenic |
| GGATTTATAGGTTACCGGTT+TGG | 0.402406 | tig0018481:-76064 | None:intergenic |
| CCAGGCATGCCTCCAGCTCC+AGG | 0.402735 | tig0018481:-79870 | None:intergenic |
| GGCATGCCAGGTGGCTTCCC+TGG | 0.407390 | tig0018481:+79942 | Msa1366730:CDS |
| ACTGAAGCATTTCATCGAAC+AGG | 0.419219 | tig0018481:+75858 | Msa1366730:CDS |
| TGATGCTTAGCCAAATTAGC+AGG | 0.424893 | tig0018481:-81460 | None:intergenic |
| AGGTGGCTTCCCTGGTGCTG+GGG | 0.431193 | tig0018481:+79950 | Msa1366730:CDS |
| GCAATTACAGGCGCAACCTT+AGG | 0.431280 | tig0018481:-81490 | None:intergenic |
| GATTTGAAATGCAGGTAAGT+TGG | 0.431902 | tig0018481:+77709 | Msa1366730:intron |
| AATAAATGCAGTACTTAAGA+AGG | 0.435773 | tig0018481:+78738 | Msa1366730:CDS |
| GAGCAATTTACCTACAAAAC+AGG | 0.441420 | tig0018481:-81675 | None:intergenic |
| AACCCACCAGGCATGCCTCC+TGG | 0.442230 | tig0018481:-79798 | None:intergenic |
| GACGGTGTTCCTCAAGCTTG+TGG | 0.445827 | tig0018481:-79546 | None:intergenic |
| TGAATCTGCTTATTCCAAAC+CGG | 0.446532 | tig0018481:+76050 | Msa1366730:CDS |
| TTCCTGGTGGCATGCCAGGT+GGG | 0.449604 | tig0018481:+79844 | Msa1366730:CDS |
| GAAGGATCGGCGAGAGTTGA+AGG | 0.450788 | tig0018481:-75892 | None:intergenic |
| ATTTAGTGATCCAGAAGTTA+TGG | 0.450797 | tig0018481:+80630 | Msa1366730:CDS |
| TTTCCTGGTGGCATGCCTGG+TGG | 0.456397 | tig0018481:+79819 | Msa1366730:CDS |
| CATGCCTCCTGGATTTCTAC+TGG | 0.458350 | tig0018481:-79787 | None:intergenic |
| GGTGGCTTCCCTGGTGCTGG+GGG | 0.460557 | tig0018481:+79951 | Msa1366730:CDS |
| ATTAATCCTGATTCTGCTAA+AGG | 0.461076 | tig0018481:+78619 | Msa1366730:CDS |
| GTTGCTGATAAATAAAGAAC+GGG | 0.461987 | tig0018481:-81697 | None:intergenic |
| ACGTCGCCGTGCTGAAGCTC+AGG | 0.464988 | tig0018481:+79627 | Msa1366730:CDS |
| ACCTTCAGAAATAGCTTCCA+TGG | 0.467634 | tig0018481:-76616 | None:intergenic |
| TTTCCTGGTGGCATGCCAGG+TGG | 0.472959 | tig0018481:+79843 | Msa1366730:CDS |
| GGCATAGCACGAGCGATGTT+AGG | 0.474824 | tig0018481:+78655 | Msa1366730:CDS |
| CCAGCTCCAGGGAAGCCACC+TGG | 0.479950 | tig0018481:-79918 | None:intergenic |
| TTCAGTTCTTTCAGCTTCGA+CGG | 0.483301 | tig0018481:-75841 | None:intergenic |
| ACGGTGTTCCTCAAGCTTGT+GGG | 0.484817 | tig0018481:-79545 | None:intergenic |
| GATGGGAGACTCTTCTATTG+AGG | 0.485824 | tig0018481:+76548 | Msa1366730:intron |
| AGAAATCCAGGAGGCATGCC+TGG | 0.486319 | tig0018481:+79792 | Msa1366730:CDS |
| CCAGCTCCAGGGAACCCACC+TGG | 0.488525 | tig0018481:-79858 | None:intergenic |
| TTATTACGTCAAGAAAAGTC+TGG | 0.496700 | tig0018481:+75717 | None:intergenic |
| CCAGCACCAGGGAAGCCACC+TGG | 0.501406 | tig0018481:-79948 | None:intergenic |
| AACACCGTCGGAAGTATGAT+AGG | 0.501898 | tig0018481:+79560 | Msa1366730:CDS |
| ACATTTCCAGGCACCCCTCC+TGG | 0.502248 | tig0018481:-79978 | None:intergenic |
| AAATTTGGAGGTGCTGGTGC+TGG | 0.503831 | tig0018481:+81526 | Msa1366730:CDS |
| AGTGAAGGTGGAGGAAGTAG+AGG | 0.506193 | tig0018481:+76357 | Msa1366730:CDS |
| ATCGGCGAGAGTTGAAGGAT+TGG | 0.506790 | tig0018481:-75887 | None:intergenic |
| CAACATAATGTTCTACTGAC+TGG | 0.508828 | tig0018481:+81716 | Msa1366730:three_prime_UTR |
| GGTGGCTTCCCTGGAGCTGG+AGG | 0.510854 | tig0018481:+79921 | Msa1366730:CDS |
| GGTGGGTTCCCTGGAGCTGG+AGG | 0.512808 | tig0018481:+79861 | Msa1366730:CDS |
| AACCCACCTGGCATGCCACC+AGG | 0.518038 | tig0018481:-79846 | None:intergenic |
| ATGAGCAAATTTGGAGGTGC+TGG | 0.518441 | tig0018481:+81520 | Msa1366730:CDS |
| GGTGGTTTCCCTGGAGCTGG+AGG | 0.521607 | tig0018481:+79891 | Msa1366730:CDS |
| AACATTAATATTAAATGCAG+AGG | 0.526661 | tig0018481:-81594 | None:intergenic |
| TCATCTTCCAGTAGAAATCC+AGG | 0.527739 | tig0018481:+79780 | Msa1366730:CDS |
| TTCCAGATAGTCGCGGAAGA+AGG | 0.528291 | tig0018481:-75920 | None:intergenic |
| AGTGAGTGAAGTTATGAGAC+GGG | 0.529459 | tig0018481:-75742 | None:intergenic |
| TGATGATATAGAGGATGTAG+AGG | 0.529858 | tig0018481:+76327 | Msa1366730:CDS |
| GAAGGTGGAGGAAGTAGAGG+AGG | 0.530279 | tig0018481:+76360 | Msa1366730:CDS |
| TGATGATGATCCTCCACAAA+AGG | 0.530712 | tig0018481:+76435 | Msa1366730:CDS |
| GTCGTTATCCTTCTGTTAAG+GGG | 0.537029 | tig0018481:+81753 | Msa1366730:three_prime_UTR |
| CCAGCTCCAGGGAAACCACC+AGG | 0.542496 | tig0018481:-79888 | None:intergenic |
| GGAGAGTGATGATGATATAG+AGG | 0.544104 | tig0018481:+76318 | Msa1366730:CDS |
| ATCCAGGAGGCATGCCTGGT+GGG | 0.544169 | tig0018481:+79796 | Msa1366730:CDS |
| TTGAAATGCAGGTAAGTTGG+AGG | 0.550318 | tig0018481:+77712 | Msa1366730:intron |
| GCCATGGAAGCTATTTCTGA+AGG | 0.550734 | tig0018481:+76615 | Msa1366730:CDS |
| ACGAGCGATGTTAGGTCAGT+GGG | 0.552926 | tig0018481:+78663 | Msa1366730:CDS |
| CTGGCATGCCTCCAGCTCCA+GGG | 0.555498 | tig0018481:-79929 | None:intergenic |
| CTGGCATGCCTCCAGCTCCA+GGG | 0.562934 | tig0018481:-79899 | None:intergenic |
| AACCCACCAGGCATGCCACC+AGG | 0.566427 | tig0018481:-79822 | None:intergenic |
| AAATGCAGGTAAGTTGGAGG+AGG | 0.571709 | tig0018481:+77715 | Msa1366730:intron |
| GTTATGGCTGCTCTTCAAGA+TGG | 0.577168 | tig0018481:+80646 | Msa1366730:CDS |
| CTAAAGCAGCATTTGCATCA+CGG | 0.578900 | tig0018481:-77945 | None:intergenic |
| TGTTGCTGATAAATAAAGAA+CGG | 0.578903 | tig0018481:-81698 | None:intergenic |
| GATGTTAGGTCAGTGGGCAG+AGG | 0.584127 | tig0018481:+78669 | Msa1366730:CDS |
| GCATACATTATGGCAGAGGT+AGG | 0.590248 | tig0018481:-77773 | None:intergenic |
| ATGCCTGGTGGGTTTCCTGG+TGG | 0.590868 | tig0018481:+79831 | Msa1366730:CDS |
| TCAGTGGGCAGAGGCTGCAA+AGG | 0.593485 | tig0018481:+78678 | Msa1366730:CDS |
| GGAGCTGGAGGCATGCCAGG+TGG | 0.596271 | tig0018481:+79903 | Msa1366730:CDS |
| GGAGCTGGAGGCATGCCAGG+TGG | 0.596271 | tig0018481:+79933 | Msa1366730:CDS |
| GAAGAAGGAAAGTGAAGGAT+CGG | 0.598302 | tig0018481:-75905 | None:intergenic |
| CAGGCATGCCTCCAGCTCCA+GGG | 0.598561 | tig0018481:-79869 | None:intergenic |
| ATGCCTGGTGGGTTTCCTGG+TGG | 0.601094 | tig0018481:+79807 | Msa1366730:CDS |
| GTTCGCATACATTATGGCAG+AGG | 0.603058 | tig0018481:-77777 | None:intergenic |
| ATGCCACCAGGAAACCCACC+AGG | 0.604434 | tig0018481:-79810 | None:intergenic |
| ATGCCACCAGGAAACCCACC+AGG | 0.604434 | tig0018481:-79834 | None:intergenic |
| GAGTGAGTGAAGTTATGAGA+CGG | 0.604697 | tig0018481:-75743 | None:intergenic |
| CACGAGCGATGTTAGGTCAG+TGG | 0.605207 | tig0018481:+78662 | Msa1366730:CDS |
| TAAGCATCAAGCAAATCCTA+AGG | 0.609912 | tig0018481:+81474 | Msa1366730:CDS |
| GTTGGCTAAAGCTAAAGCCA+TGG | 0.612574 | tig0018481:+76599 | Msa1366730:CDS |
| TTCAAATATAGACTATGATG+AGG | 0.614340 | tig0018481:+78714 | Msa1366730:CDS |
| GGAGCTGGAGGCATGCCTGG+TGG | 0.616668 | tig0018481:+79873 | Msa1366730:CDS |
| GATGCTTAGCCAAATTAGCA+GGG | 0.619304 | tig0018481:-81459 | None:intergenic |
| TCTTCCGCGACTATCTGGAA+AGG | 0.619864 | tig0018481:+75923 | Msa1366730:CDS |
| ACCAAATGCCCACAAGCTTG+AGG | 0.625027 | tig0018481:+79537 | Msa1366730:CDS |
| GAGTCGCGAGTCTTCACAGT+TGG | 0.629669 | tig0018481:+76581 | Msa1366730:CDS |
| TGAATCTGATGTTGAGCTAG+AGG | 0.631648 | tig0018481:+76396 | Msa1366730:CDS |
| ATTACAGGCTGCATATGAGA+AGG | 0.633459 | tig0018481:+79740 | Msa1366730:intron |
| AGGATCATCATCAGGCTCAA+CGG | 0.634198 | tig0018481:-76425 | None:intergenic |
| AATCCAGGAGGCATGCCTGG+TGG | 0.636100 | tig0018481:+79795 | Msa1366730:CDS |
| TCAGGACCCTGATTTGATGA+CGG | 0.640802 | tig0018481:+80606 | Msa1366730:intron |
| TAAATGCCGTCATCAAATCA+GGG | 0.644915 | tig0018481:-80612 | None:intergenic |
| TTAACCTTTCCAGATAGTCG+CGG | 0.647422 | tig0018481:-75927 | None:intergenic |
| GCCATAATGTATGCGAACAG+AGG | 0.651943 | tig0018481:+77782 | Msa1366730:CDS |
| TGACAACCTGAGCTTCAGCA+CGG | 0.665555 | tig0018481:-79633 | None:intergenic |
| AAAATGATGAGCAAATTTGG+AGG | 0.667013 | tig0018481:+81514 | Msa1366730:CDS |
| CGTGTGTGAGACTGTGACTG+CGG | 0.672748 | tig0018481:-75812 | None:intergenic |
| AGTCTATATTTGAAGCTACG+TGG | 0.679272 | tig0018481:-78705 | None:intergenic |
| TCGCGGAAGAAGGAAAGTGA+AGG | 0.681654 | tig0018481:-75910 | None:intergenic |
| GAATCTGATGTTGAGCTAGA+GGG | 0.681770 | tig0018481:+76397 | Msa1366730:CDS |
| TTGTGTATGATAGAGATCTG+TGG | 0.694890 | tig0018481:+76297 | Msa1366730:intron |
| GTGAGTGAAGTTATGAGACG+GGG | 0.707540 | tig0018481:-75741 | None:intergenic |
| ACAAGCTTGAGGAACACCGT+CGG | 0.708816 | tig0018481:+79548 | Msa1366730:CDS |
| GCAACCTATCATACTTCCGA+CGG | 0.716325 | tig0018481:-79564 | None:intergenic |
| GCTAAAGGATACAAGTCACG+TGG | 0.726718 | tig0018481:+78634 | Msa1366730:CDS |
| AGTCACAGTCTCACACACGA+TGG | 0.752498 | tig0018481:+75816 | Msa1366730:exon |
| GTGAGACTGTGACTGCGGCG+CGG | 0.753090 | tig0018481:-75807 | None:intergenic |
| TCTTCCAGTAGAAATCCAGG+AGG | 0.793372 | tig0018481:+79783 | Msa1366730:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GATCTTATTTTATTTTTTAA+TGG | + | tig0018481:77516-77535 | Msa1366730:intron | 10.0% |
| !!! | TCGTTTTATAAAATTATAAC+CGG | - | tig0018481:76172-76191 | None:intergenic | 15.0% |
| !!! | TATAAATAAATAACCTTTTG+TGG | - | tig0018481:76451-76470 | None:intergenic | 15.0% |
| !!! | ATTTTTATGGTTACTATTAT+TGG | + | tig0018481:76685-76704 | Msa1366730:intron | 15.0% |
| !!! | TTTTTATGGTTACTATTATT+GGG | + | tig0018481:76686-76705 | Msa1366730:intron | 15.0% |
| !!! | ATCAAATTTTTATTGGTTAA+AGG | + | tig0018481:77109-77128 | Msa1366730:intron | 15.0% |
| !! | AATAGGTATATGTAATTTAT+GGG | - | tig0018481:77448-77467 | None:intergenic | 15.0% |
| !! | TTACATCATTCTTAATTAAT+TGG | - | tig0018481:79097-79116 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTAAAATACCC+AGG | - | tig0018481:80178-80197 | None:intergenic | 15.0% |
| !!! | TTTTTTTTCTGGTTAATTTA+AGG | + | tig0018481:80789-80808 | Msa1366730:intron | 15.0% |
| !!! | TTTTTTTCTGGTTAATTTAA+GGG | + | tig0018481:80790-80809 | Msa1366730:intron | 15.0% |
| !! | ATTTATCATATCTATAAAGA+GGG | + | tig0018481:81011-81030 | Msa1366730:intron | 15.0% |
| !!! | ATTTAATTGGATATTTTGTT+TGG | + | tig0018481:81039-81058 | Msa1366730:intron | 15.0% |
| !! | ACAAATTAAAGCAGATAATA+GGG | - | tig0018481:75990-76009 | None:intergenic | 20.0% |
| !! | AACAAATTAAAGCAGATAAT+AGG | - | tig0018481:75991-76010 | None:intergenic | 20.0% |
| !! | AACATTAAACAAAAACAACA+AGG | - | tig0018481:76088-76107 | None:intergenic | 20.0% |
| !! | GAAAAAATTAATCTATTGCA+TGG | + | tig0018481:76738-76757 | Msa1366730:intron | 20.0% |
| !! | AAATATTCAAGACAAGATAT+GGG | - | tig0018481:76844-76863 | None:intergenic | 20.0% |
| !! | AAAATATTCAAGACAAGATA+TGG | - | tig0018481:76845-76864 | None:intergenic | 20.0% |
| !!! | TGTGAATTTTCTATTTTCAA+AGG | - | tig0018481:77066-77085 | None:intergenic | 20.0% |
| !!! | TCCACAAATCAAATTTTTAT+TGG | + | tig0018481:77102-77121 | Msa1366730:intron | 20.0% |
| !!! | ACCAATAAAAATTTGATTTG+TGG | - | tig0018481:77106-77125 | None:intergenic | 20.0% |
| !!! | AACGAGTTTATTTGTTATTT+TGG | - | tig0018481:77348-77367 | None:intergenic | 20.0% |
| !! | GAATAGGTATATGTAATTTA+TGG | - | tig0018481:77449-77468 | None:intergenic | 20.0% |
| !!! | TTTTAATGGTAACTATGTTA+TGG | + | tig0018481:77530-77549 | Msa1366730:intron | 20.0% |
| !! | TTTAATGGTAACTATGTTAT+GGG | + | tig0018481:77531-77550 | Msa1366730:intron | 20.0% |
| !!! | TTTGAAATAGAACATTCAAT+GGG | - | tig0018481:77620-77639 | None:intergenic | 20.0% |
| !!! | ATTTGAAATAGAACATTCAA+TGG | - | tig0018481:77621-77640 | None:intergenic | 20.0% |
| !!! | TTCATAATTTGTTTCTCTAA+AGG | - | tig0018481:78223-78242 | None:intergenic | 20.0% |
| !! | AATTATGACCATTGAAAAAA+AGG | - | tig0018481:78504-78523 | None:intergenic | 20.0% |
| !! | TACATAGACATAATAAATTC+TGG | - | tig0018481:78547-78566 | None:intergenic | 20.0% |
| !! | TTAAGTAACCTATTTCAATA+TGG | + | tig0018481:78965-78984 | Msa1366730:intron | 20.0% |
| !!! | TTATAAAATATGGATTGTGT+AGG | + | tig0018481:79510-79529 | Msa1366730:intron | 20.0% |
| !!! | AAAAAGTATGCAAAATTTCA+TGG | + | tig0018481:80268-80287 | Msa1366730:intron | 20.0% |
| !!! | AAAAGTATGCAAAATTTCAT+GGG | + | tig0018481:80269-80288 | Msa1366730:intron | 20.0% |
| !!! | TAATTTTCTGTTCTAATACT+TGG | + | tig0018481:80669-80688 | Msa1366730:intron | 20.0% |
| !! | AAAAAAAATTATCAATCACG+TGG | - | tig0018481:80777-80796 | None:intergenic | 20.0% |
| !!! | GTGATTGATAATTTTTTTTC+TGG | + | tig0018481:80778-80797 | Msa1366730:intron | 20.0% |
| !! | GATTTATCATATCTATAAAG+AGG | + | tig0018481:81010-81029 | Msa1366730:intron | 20.0% |
| !! | TTTATCATATCTATAAAGAG+GGG | + | tig0018481:81012-81031 | Msa1366730:intron | 20.0% |
| !! | AACATTAATATTAAATGCAG+AGG | - | tig0018481:81597-81616 | None:intergenic | 20.0% |
| !!! | ATGTTGCATTTTTAATTGTA+CGG | + | tig0018481:81621-81640 | Msa1366730:three_prime_UTR | 20.0% |
| !!! | TCATTAAACTTTTTTATGCA+AGG | + | tig0018481:81652-81671 | Msa1366730:three_prime_UTR | 20.0% |
| !! | GTTTTATGTTAAACAGTAGT+GGG | - | tig0018481:75770-75789 | None:intergenic | 25.0% |
| ! | CAAAAACAACAAGGATTTAT+AGG | - | tig0018481:76079-76098 | None:intergenic | 25.0% |
| !! | AAATAAATAACCTTTTGTGG+AGG | - | tig0018481:76448-76467 | None:intergenic | 25.0% |
| ! | GTTTATTTATGTTGAGTTTG+AGG | + | tig0018481:76493-76512 | Msa1366730:intron | 25.0% |
| ! | AATTAATCTATTGCATGGAA+TGG | + | tig0018481:76743-76762 | Msa1366730:intron | 25.0% |
| !!! | AATGGTTTTAAGTTGATACT+TGG | + | tig0018481:76761-76780 | Msa1366730:intron | 25.0% |
| !!! | CTTGAATATTTTAAAACCCT+AGG | + | tig0018481:76853-76872 | Msa1366730:intron | 25.0% |
| ! | ATTGTAACATGTTTACTGTT+CGG | - | tig0018481:76923-76942 | None:intergenic | 25.0% |
| ! | CTATTCTCTATATATAACCA+GGG | + | tig0018481:77463-77482 | Msa1366730:intron | 25.0% |
| ! | GAAGGGATAAAATTAATCAA+TGG | + | tig0018481:77564-77583 | Msa1366730:intron | 25.0% |
| !!! | TTTTTTTGTTCTTATTGTCC+AGG | + | tig0018481:77844-77863 | Msa1366730:intron | 25.0% |
| ! | TTTGCTTGACTTAAAATAGA+CGG | + | tig0018481:78019-78038 | Msa1366730:intron | 25.0% |
| ! | TGTTGCATTATATTCCAAAA+AGG | + | tig0018481:78071-78090 | Msa1366730:intron | 25.0% |
| ! | TTCAAATTACTCACAAAGAT+AGG | + | tig0018481:78147-78166 | Msa1366730:intron | 25.0% |
| !!! | GAGATATACCTTTTTTTCAA+TGG | + | tig0018481:78493-78512 | Msa1366730:intron | 25.0% |
| ! | TTCAAATATAGACTATGATG+AGG | + | tig0018481:78714-78733 | Msa1366730:CDS | 25.0% |
| ! | AATAAATGCAGTACTTAAGA+AGG | + | tig0018481:78738-78757 | Msa1366730:CDS | 25.0% |
| ! | GTAACATAAACGAAATTATG+AGG | + | tig0018481:78921-78940 | Msa1366730:intron | 25.0% |
| ! | GCAAATTTCCATATTGAAAT+AGG | - | tig0018481:78976-78995 | None:intergenic | 25.0% |
| !!! | GAAGTGTTGCATAATAATTT+AGG | - | tig0018481:79123-79142 | None:intergenic | 25.0% |
| !! | GCATGATAATAATGATAATG+AGG | + | tig0018481:79164-79183 | Msa1366730:intron | 25.0% |
| !! | TTCAATCTGATATTGTTTTC+AGG | - | tig0018481:79276-79295 | None:intergenic | 25.0% |
| !!! | AACTTCATAGTTTTTTTAGC+TGG | + | tig0018481:79333-79352 | Msa1366730:intron | 25.0% |
| ! | TACAAGTAAAAACCTAGAAT+TGG | - | tig0018481:79380-79399 | None:intergenic | 25.0% |
| ! | TTGAATATTTGAATATTCCC+AGG | + | tig0018481:80213-80232 | Msa1366730:intron | 25.0% |
| !! | AAATAACTTCCAATTTTCCT+GGG | - | tig0018481:80233-80252 | None:intergenic | 25.0% |
| !! | AAAATAACTTCCAATTTTCC+TGG | - | tig0018481:80234-80253 | None:intergenic | 25.0% |
| !! | AATTTCCCATCTTTTAACAT+GGG | + | tig0018481:80297-80316 | Msa1366730:intron | 25.0% |
| ! | TTATTCCCATGTTAAAAGAT+GGG | - | tig0018481:80305-80324 | None:intergenic | 25.0% |
| ! | ATTATTCCCATGTTAAAAGA+TGG | - | tig0018481:80306-80325 | None:intergenic | 25.0% |
| ! | AATTTCATCGAAATATACCT+AGG | + | tig0018481:80323-80342 | Msa1366730:intron | 25.0% |
| !! | AGTTTAAGATTTACATTCCT+AGG | - | tig0018481:80408-80427 | None:intergenic | 25.0% |
| ! | TTTATATAACCTTCCATTTG+TGG | + | tig0018481:80476-80495 | Msa1366730:intron | 25.0% |
| ! | TTATATAACCTTCCATTTGT+GGG | + | tig0018481:80477-80496 | Msa1366730:intron | 25.0% |
| !! | ATTTTGTGATTCCAAATCTA+AGG | - | tig0018481:80871-80890 | None:intergenic | 25.0% |
| ! | ACAAAATCTGCTAAAATCTA+AGG | + | tig0018481:80884-80903 | Msa1366730:intron | 25.0% |
| ! | GGGAGATGTTAATTTAATTA+AGG | + | tig0018481:81137-81156 | Msa1366730:intron | 25.0% |
| ! | ATGTAAAGACATGTATTTGA+AGG | + | tig0018481:81211-81230 | Msa1366730:intron | 25.0% |
| ! | GACTCAAAATTTAGTCAATA+AGG | + | tig0018481:81286-81305 | Msa1366730:intron | 25.0% |
| ! | ATACGGCAATATGTTATATT+TGG | - | tig0018481:81356-81375 | None:intergenic | 25.0% |
| !!! | TCTTTTTTTCATTCAGAAGA+CGG | - | tig0018481:81392-81411 | None:intergenic | 25.0% |
| ! | TGTTGCTGATAAATAAAGAA+CGG | - | tig0018481:81701-81720 | None:intergenic | 25.0% |
| !! | GGTTTTATGTTAAACAGTAG+TGG | - | tig0018481:75771-75790 | None:intergenic | 30.0% |
| !!! | TTGCTTGTTATTTTCAGTCT+CGG | + | tig0018481:76015-76034 | Msa1366730:intron | 30.0% |
| AACAAGGATTTATAGGTTAC+CGG | - | tig0018481:76072-76091 | None:intergenic | 30.0% | |
| TTATGGTTACTATTATTGGG+AGG | + | tig0018481:76689-76708 | Msa1366730:intron | 30.0% | |
| ! | TTTTTCGCATACATTGTTTG+TGG | - | tig0018481:76724-76743 | None:intergenic | 30.0% |
| AGTCGTAAGATACTTTGATT+TGG | + | tig0018481:76815-76834 | Msa1366730:intron | 30.0% | |
| !!! | GAATATTTTAAAACCCTAGG+AGG | + | tig0018481:76856-76875 | Msa1366730:intron | 30.0% |
| TTATTTATCACTAGCAGTCA+GGG | - | tig0018481:76970-76989 | None:intergenic | 30.0% | |
| ACTGCTAGTGATAAATAACT+GGG | + | tig0018481:76972-76991 | Msa1366730:intron | 30.0% | |
| ! | CTCACTATAGAATTTGCTTT+AGG | - | tig0018481:77042-77061 | None:intergenic | 30.0% |
| TAACAAATAAACTCGTTGCT+TGG | + | tig0018481:77351-77370 | Msa1366730:intron | 30.0% | |
| CCTGGTTATATATAGAGAAT+AGG | - | tig0018481:77465-77484 | None:intergenic | 30.0% | |
| CCTATTCTCTATATATAACC+AGG | + | tig0018481:77462-77481 | Msa1366730:intron | 30.0% | |
| TCATACCAGTTCATAAAGTT+TGG | + | tig0018481:77494-77513 | Msa1366730:intron | 30.0% | |
| AAGATCCAAACTTTATGAAC+TGG | - | tig0018481:77502-77521 | None:intergenic | 30.0% | |
| TTATGGGATGATGTTAAGAA+GGG | + | tig0018481:77547-77566 | Msa1366730:intron | 30.0% | |
| ! | GTAATGTGATGATGTTAGAT+TGG | + | tig0018481:77594-77613 | Msa1366730:intron | 30.0% |
| ! | TTCAAATATCTCGACTGTTT+TGG | + | tig0018481:77634-77653 | Msa1366730:intron | 30.0% |
| ! | TCAAATATCTCGACTGTTTT+GGG | + | tig0018481:77635-77654 | Msa1366730:intron | 30.0% |
| TGTTATAAGTCTTTGAGTGT+TGG | - | tig0018481:77679-77698 | None:intergenic | 30.0% | |
| CACTCAAAGACTTATAACAA+TGG | + | tig0018481:77680-77699 | Msa1366730:intron | 30.0% | |
| ! | GGAATTATGATTTGAAATGC+AGG | + | tig0018481:77701-77720 | Msa1366730:intron | 30.0% |
| !! | CTTCATTTTGATGTAAACAC+TGG | - | tig0018481:77908-77927 | None:intergenic | 30.0% |
| TGCAACAAAAACATTATGCA+TGG | - | tig0018481:78058-78077 | None:intergenic | 30.0% | |
| TCTAACCTAAAAAGAGAGAA+AGG | + | tig0018481:78114-78133 | Msa1366730:intron | 30.0% | |
| TTAAGTAGACACTCCTTTAA+AGG | + | tig0018481:78352-78371 | Msa1366730:intron | 30.0% | |
| ATTAATCCTGATTCTGCTAA+AGG | + | tig0018481:78619-78638 | Msa1366730:CDS | 30.0% | |
| ATTCCCATCAAAAGATACTA+GGG | - | tig0018481:78776-78795 | None:intergenic | 30.0% | |
| TATTCCCATCAAAAGATACT+AGG | - | tig0018481:78777-78796 | None:intergenic | 30.0% | |
| AATTCTAAATGCAAGAAGGT+AGG | - | tig0018481:78869-78888 | None:intergenic | 30.0% | |
| AGGTAATTCTAAATGCAAGA+AGG | - | tig0018481:78873-78892 | None:intergenic | 30.0% | |
| TTTCAATATGGAAATTTGCC+TGG | + | tig0018481:78977-78996 | Msa1366730:intron | 30.0% | |
| TTCAATATGGAAATTTGCCT+GGG | + | tig0018481:78978-78997 | Msa1366730:intron | 30.0% | |
| TTGTACGTTATAGATTATGC+CGG | + | tig0018481:79026-79045 | Msa1366730:intron | 30.0% | |
| AGTAAAAACCTAGAATTGGT+TGG | - | tig0018481:79376-79395 | None:intergenic | 30.0% | |
| ACAAATCCTGCTTAGTTAAA+GGG | + | tig0018481:79446-79465 | Msa1366730:intron | 30.0% | |
| AATAAGTTGTGTTCAATGGT+TGG | + | tig0018481:79470-79489 | Msa1366730:intron | 30.0% | |
| ! | TGCTAACTTGTATACATTAC+AGG | + | tig0018481:79725-79744 | Msa1366730:intron | 30.0% |
| TTGCTAAAATCAACATTTCC+AGG | - | tig0018481:79993-80012 | None:intergenic | 30.0% | |
| TTGAATATTCCCAGGAAAAT+TGG | + | tig0018481:80221-80240 | Msa1366730:intron | 30.0% | |
| CATGTTAAAAGATGGGAAAT+TGG | - | tig0018481:80298-80317 | None:intergenic | 30.0% | |
| ! | CAATTTCCCATCTTTTAACA+TGG | + | tig0018481:80296-80315 | Msa1366730:intron | 30.0% |
| GTTGAGAAATCATTATTCCT+AGG | - | tig0018481:80343-80362 | None:intergenic | 30.0% | |
| ! | GTATATCCATGTTTGTTACA+AGG | - | tig0018481:80365-80384 | None:intergenic | 30.0% |
| ATTTAGTGATCCAGAAGTTA+TGG | + | tig0018481:80630-80649 | Msa1366730:CDS | 30.0% | |
| ! | ACCTTTTCTATCCTTAGATT+TGG | + | tig0018481:80857-80876 | Msa1366730:intron | 30.0% |
| TCCAAATCTAAGGATAGAAA+AGG | - | tig0018481:80861-80880 | None:intergenic | 30.0% | |
| !!! | TGGATATTTTGTTTGGTTTG+AGG | + | tig0018481:81046-81065 | Msa1366730:intron | 30.0% |
| !!! | GGATATTTTGTTTGGTTTGA+GGG | + | tig0018481:81047-81066 | Msa1366730:intron | 30.0% |
| AAAAAAGAGAACCAAACAAG+AGG | - | tig0018481:81096-81115 | None:intergenic | 30.0% | |
| !!! | TCTTGTTTGGTTCTCTTTTT+TGG | + | tig0018481:81095-81114 | Msa1366730:intron | 30.0% |
| GATAGTTCTTAAGATGAGAA+GGG | + | tig0018481:81117-81136 | Msa1366730:intron | 30.0% | |
| TCTGGTCCAATATTGAATAT+TGG | + | tig0018481:81259-81278 | Msa1366730:intron | 30.0% | |
| TCTGCTCCAATATTCAATAT+TGG | - | tig0018481:81268-81287 | None:intergenic | 30.0% | |
| TAGAAGAAGATAAGAGGAAT+GGG | - | tig0018481:81332-81351 | None:intergenic | 30.0% | |
| TTAGAAGAAGATAAGAGGAA+TGG | - | tig0018481:81333-81352 | None:intergenic | 30.0% | |
| TTTGGTTAGAAGAAGATAAG+AGG | - | tig0018481:81338-81357 | None:intergenic | 30.0% | |
| !!! | AGTTCCTCATTTCTCTTTTT+TGG | + | tig0018481:81416-81435 | Msa1366730:intron | 30.0% |
| TCAACCAAAAAAGAGAAATG+AGG | - | tig0018481:81423-81442 | None:intergenic | 30.0% | |
| AAAATGATGAGCAAATTTGG+AGG | + | tig0018481:81514-81533 | Msa1366730:CDS | 30.0% | |
| GTTGCTGATAAATAAAGAAC+GGG | - | tig0018481:81700-81719 | None:intergenic | 30.0% | |
| TGAATCTGCTTATTCCAAAC+CGG | + | tig0018481:76050-76069 | Msa1366730:CDS | 35.0% | |
| !! | ATATCGTCGAAGTATTGTCA+CGG | + | tig0018481:76117-76136 | Msa1366730:intron | 35.0% |
| TTGTGTATGATAGAGATCTG+TGG | + | tig0018481:76297-76316 | Msa1366730:intron | 35.0% | |
| TGATGATATAGAGGATGTAG+AGG | + | tig0018481:76327-76346 | Msa1366730:CDS | 35.0% | |
| TGTAGAGGAAGAAAAAGTGA+AGG | + | tig0018481:76342-76361 | Msa1366730:CDS | 35.0% | |
| !! | AATGCATGTGTTGTTTCAGA+TGG | + | tig0018481:76530-76549 | Msa1366730:intron | 35.0% |
| !! | ATGCATGTGTTGTTTCAGAT+GGG | + | tig0018481:76531-76550 | Msa1366730:intron | 35.0% |
| GTTATTTATCACTAGCAGTC+AGG | - | tig0018481:76971-76990 | None:intergenic | 35.0% | |
| GACTGCTAGTGATAAATAAC+TGG | + | tig0018481:76971-76990 | Msa1366730:intron | 35.0% | |
| CTAGTGATAAATAACTGGGA+AGG | + | tig0018481:76976-76995 | Msa1366730:intron | 35.0% | |
| AGCATACTTGTCTGTCAATT+TGG | + | tig0018481:77269-77288 | Msa1366730:intron | 35.0% | |
| GCATACTTGTCTGTCAATTT+GGG | + | tig0018481:77270-77289 | Msa1366730:intron | 35.0% | |
| CATACTTGTCTGTCAATTTG+GGG | + | tig0018481:77271-77290 | Msa1366730:intron | 35.0% | |
| !!! | TGTTATTTTGGAGTTGCAGA+CGG | - | tig0018481:77336-77355 | None:intergenic | 35.0% |
| GTTATGGGATGATGTTAAGA+AGG | + | tig0018481:77546-77565 | Msa1366730:intron | 35.0% | |
| ! | GATTTGAAATGCAGGTAAGT+TGG | + | tig0018481:77709-77728 | Msa1366730:intron | 35.0% |
| GTATCAATGAATGTTTGTCC+TGG | - | tig0018481:77865-77884 | None:intergenic | 35.0% | |
| CAGTTTATCATGCAGTACAA+CGG | - | tig0018481:77990-78009 | None:intergenic | 35.0% | |
| ! | CAAAGAAACGTTGTCCTTTT+TGG | - | tig0018481:78088-78107 | None:intergenic | 35.0% |
| ! | AGACACCTTTCTCTCTTTTT+AGG | - | tig0018481:78122-78141 | None:intergenic | 35.0% |
| !! | GATCAAATCTTAAGAGCACT+TGG | - | tig0018481:78175-78194 | None:intergenic | 35.0% |
| TGCTCTTAAGATTTGATCAG+TGG | + | tig0018481:78177-78196 | Msa1366730:intron | 35.0% | |
| TTTGATAAGATGCAGAACTG+TGG | + | tig0018481:78283-78302 | Msa1366730:intron | 35.0% | |
| TACAACACGTTGACAGTATT+TGG | - | tig0018481:78320-78339 | None:intergenic | 35.0% | |
| GAGACAGATTGAACCTTTAA+AGG | - | tig0018481:78368-78387 | None:intergenic | 35.0% | |
| ATCAGGATTAATCTGGAAAG+AGG | - | tig0018481:78611-78630 | None:intergenic | 35.0% | |
| TAGCAGAATCAGGATTAATC+TGG | - | tig0018481:78618-78637 | None:intergenic | 35.0% | |
| TTGTATCCTTTAGCAGAATC+AGG | - | tig0018481:78628-78647 | None:intergenic | 35.0% | |
| ! | AGTCTATATTTGAAGCTACG+TGG | - | tig0018481:78708-78727 | None:intergenic | 35.0% |
| ! | TTTGCCCTAGTATCTTTTGA+TGG | + | tig0018481:78769-78788 | Msa1366730:intron | 35.0% |
| ! | TTGCCCTAGTATCTTTTGAT+GGG | + | tig0018481:78770-78789 | Msa1366730:intron | 35.0% |
| ! | TTTTGATGGGAATATTCGTC+AGG | + | tig0018481:78783-78802 | Msa1366730:intron | 35.0% |
| !! | GTGTTGACTGTGATAAATGA+CGG | + | tig0018481:78809-78828 | Msa1366730:intron | 35.0% |
| TTACCTCACTTGTCAATAAC+TGG | + | tig0018481:78887-78906 | Msa1366730:intron | 35.0% | |
| TCAATATGGAAATTTGCCTG+GGG | + | tig0018481:78979-78998 | Msa1366730:intron | 35.0% | |
| ATCATGCATCTATTCCTTTG+CGG | - | tig0018481:79151-79170 | None:intergenic | 35.0% | |
| ! | TAGGAGAAACAAGTTGGAAA+AGG | + | tig0018481:79195-79214 | Msa1366730:intron | 35.0% |
| ! | AGGAGAAACAAGTTGGAAAA+GGG | + | tig0018481:79196-79215 | Msa1366730:intron | 35.0% |
| TTGTGCTCAAACAAACTTTC+AGG | - | tig0018481:79430-79449 | None:intergenic | 35.0% | |
| CACAAATCCTGCTTAGTTAA+AGG | + | tig0018481:79445-79464 | Msa1366730:intron | 35.0% | |
| TTATTGCCCTTTAACTAAGC+AGG | - | tig0018481:79455-79474 | None:intergenic | 35.0% | |
| CAGGTTGTCAATTGTGATAT+AGG | + | tig0018481:79646-79665 | Msa1366730:intron | 35.0% | |
| GCATGCTTAAAAAACATGTC+AGG | + | tig0018481:79668-79687 | Msa1366730:intron | 35.0% | |
| !! | AGATGATTGCTCTTGCTTTT+TGG | - | tig0018481:79766-79785 | None:intergenic | 35.0% |
| AACTCTCGTCTTTATATTCC+TGG | - | tig0018481:80150-80169 | None:intergenic | 35.0% | |
| !!! | AAAGACGAGAGTTTTATTCC+TGG | + | tig0018481:80157-80176 | Msa1366730:intron | 35.0% |
| !!! | AAGACGAGAGTTTTATTCCT+GGG | + | tig0018481:80158-80177 | Msa1366730:intron | 35.0% |
| TCTCAACCTTGTAACAAACA+TGG | + | tig0018481:80356-80375 | Msa1366730:intron | 35.0% | |
| TTCCTAGGAATACATGAGTA+GGG | - | tig0018481:80393-80412 | None:intergenic | 35.0% | |
| ATTCCTAGGAATACATGAGT+AGG | - | tig0018481:80394-80413 | None:intergenic | 35.0% | |
| ACTTGAAACAAACACTCACT+TGG | + | tig0018481:80425-80444 | Msa1366730:intron | 35.0% | |
| ACAAACACTCACTTGGAAAA+TGG | + | tig0018481:80432-80451 | Msa1366730:intron | 35.0% | |
| TGTGTATGTGTGATTGTGAA+GGG | - | tig0018481:80531-80550 | None:intergenic | 35.0% | |
| TTGTGTATGTGTGATTGTGA+AGG | - | tig0018481:80532-80551 | None:intergenic | 35.0% | |
| TGTTCTTTAACATGTGTCTC+AGG | + | tig0018481:80588-80607 | Msa1366730:intron | 35.0% | |
| TAAATGCCGTCATCAAATCA+GGG | - | tig0018481:80615-80634 | None:intergenic | 35.0% | |
| !!! | GTTGCCTTTTTTTCAAAGGA+AGG | + | tig0018481:80815-80834 | Msa1366730:intron | 35.0% |
| ! | GCTACCTTCCTTTGAAAAAA+AGG | - | tig0018481:80822-80841 | None:intergenic | 35.0% |
| AATCTAACAGATTCCGTCAT+TGG | - | tig0018481:80994-81013 | None:intergenic | 35.0% | |
| AAAGAGGGGAGACATTTAAT+TGG | + | tig0018481:81026-81045 | Msa1366730:intron | 35.0% | |
| !!! | ATTTTGTTTGGTTTGAGGGA+AGG | + | tig0018481:81051-81070 | Msa1366730:intron | 35.0% |
| !!! | TTTTGTTTGGTTTGAGGGAA+GGG | + | tig0018481:81052-81071 | Msa1366730:intron | 35.0% |
| GGATAGTTCTTAAGATGAGA+AGG | + | tig0018481:81116-81135 | Msa1366730:intron | 35.0% | |
| ATATTGGACCAGATTCCTAT+CGG | - | tig0018481:81252-81271 | None:intergenic | 35.0% | |
| AGAAGAAGATAAGAGGAATG+GGG | - | tig0018481:81331-81350 | None:intergenic | 35.0% | |
| ATTCAGAAGACGGCTAAAAT+GGG | - | tig0018481:81382-81401 | None:intergenic | 35.0% | |
| TATGAAGAACCCTGCTAATT+TGG | + | tig0018481:81450-81469 | Msa1366730:CDS | 35.0% | |
| TAAGCATCAAGCAAATCCTA+AGG | + | tig0018481:81474-81493 | Msa1366730:CDS | 35.0% | |
| ! | CTCATCATTTTCGCAATTAC+AGG | - | tig0018481:81505-81524 | None:intergenic | 35.0% |
| GCGAAAATGATGAGCAAATT+TGG | + | tig0018481:81511-81530 | Msa1366730:CDS | 35.0% | |
| !! | AACATGCAGTTTTGATCACT+GGG | - | tig0018481:81554-81573 | None:intergenic | 35.0% |
| !! | AAACATGCAGTTTTGATCAC+TGG | - | tig0018481:81555-81574 | None:intergenic | 35.0% |
| GTTTGTGATTTCAGCATTCT+AGG | + | tig0018481:81571-81590 | Msa1366730:three_prime_UTR | 35.0% | |
| GAGCAATTTACCTACAAAAC+AGG | - | tig0018481:81678-81697 | None:intergenic | 35.0% | |
| CAACATAATGTTCTACTGAC+TGG | + | tig0018481:81716-81735 | Msa1366730:three_prime_UTR | 35.0% | |
| AGTGAGTGAAGTTATGAGAC+GGG | - | tig0018481:75745-75764 | None:intergenic | 40.0% | |
| GAGTGAGTGAAGTTATGAGA+CGG | - | tig0018481:75746-75765 | None:intergenic | 40.0% | |
| TTCAGTTCTTTCAGCTTCGA+CGG | - | tig0018481:75844-75863 | None:intergenic | 40.0% | |
| ! | ACTGAAGCATTTCATCGAAC+AGG | + | tig0018481:75858-75877 | Msa1366730:CDS | 40.0% |
| GAAGAAGGAAAGTGAAGGAT+CGG | - | tig0018481:75908-75927 | None:intergenic | 40.0% | |
| TTAACCTTTCCAGATAGTCG+CGG | - | tig0018481:75930-75949 | None:intergenic | 40.0% | |
| ! | GGTTTGGAATAAGCAGATTC+AGG | - | tig0018481:76051-76070 | None:intergenic | 40.0% |
| ! | GGATTTATAGGTTACCGGTT+TGG | - | tig0018481:76067-76086 | None:intergenic | 40.0% |
| !! | TCGAAGTATTGTCACGGATA+CGG | + | tig0018481:76123-76142 | Msa1366730:intron | 40.0% |
| ! | GGAGAGTGATGATGATATAG+AGG | + | tig0018481:76318-76337 | Msa1366730:CDS | 40.0% |
| AGAGGAAGAAAAAGTGAAGG+TGG | + | tig0018481:76345-76364 | Msa1366730:CDS | 40.0% | |
| TGAATCTGATGTTGAGCTAG+AGG | + | tig0018481:76396-76415 | Msa1366730:CDS | 40.0% | |
| GAATCTGATGTTGAGCTAGA+GGG | + | tig0018481:76397-76416 | Msa1366730:CDS | 40.0% | |
| ! | TTTTGTGGAGGATCATCATC+AGG | - | tig0018481:76436-76455 | None:intergenic | 40.0% |
| ! | TGATGATGATCCTCCACAAA+AGG | + | tig0018481:76435-76454 | Msa1366730:CDS | 40.0% |
| !! | TGAGTTTGAGGTTTGACTTG+AGG | + | tig0018481:76505-76524 | Msa1366730:intron | 40.0% |
| ACCTTCAGAAATAGCTTCCA+TGG | - | tig0018481:76619-76638 | None:intergenic | 40.0% | |
| TGGTTACTATTATTGGGAGG+TGG | + | tig0018481:76692-76711 | Msa1366730:intron | 40.0% | |
| TACTATTATTGGGAGGTGGA+TGG | + | tig0018481:76696-76715 | Msa1366730:intron | 40.0% | |
| !!! | ATTTTAAAACCCTAGGAGGC+TGG | + | tig0018481:76860-76879 | Msa1366730:intron | 40.0% |
| !!! | GAGCTTTTTCATCCCTTCTA+AGG | - | tig0018481:76894-76913 | None:intergenic | 40.0% |
| GTAACATGTTTACTGTTCGG+AGG | - | tig0018481:76920-76939 | None:intergenic | 40.0% | |
| CTTTAGGCCTCTTAACATGT+TGG | - | tig0018481:77026-77045 | None:intergenic | 40.0% | |
| AAAGGTTTGAACCTAAGACC+AGG | + | tig0018481:77127-77146 | Msa1366730:intron | 40.0% | |
| TGGTAGTACACTTGACTTCA+GGG | + | tig0018481:77210-77229 | Msa1366730:intron | 40.0% | |
| AACGTTACATTGTGACGAAG+TGG | - | tig0018481:77411-77430 | None:intergenic | 40.0% | |
| !! | AATATCTCGACTGTTTTGGG+TGG | + | tig0018481:77638-77657 | Msa1366730:intron | 40.0% |
| ! | TTGAAATGCAGGTAAGTTGG+AGG | + | tig0018481:77712-77731 | Msa1366730:intron | 40.0% |
| ACCTCTGTTCGCATACATTA+TGG | - | tig0018481:77786-77805 | None:intergenic | 40.0% | |
| CTAAAGCAGCATTTGCATCA+CGG | - | tig0018481:77948-77967 | None:intergenic | 40.0% | |
| !! | TGATGCAAATGCTGCTTTAG+AGG | + | tig0018481:77948-77967 | Msa1366730:CDS | 40.0% |
| GTAACTGCAATCTGATATGC+AGG | + | tig0018481:78564-78583 | Msa1366730:intron | 40.0% | |
| TCAATAACTGGACGTGGTAT+GGG | + | tig0018481:78899-78918 | Msa1366730:intron | 40.0% | |
| ! | TGATAATGAGGAGTGCATCT+AGG | + | tig0018481:79176-79195 | Msa1366730:intron | 40.0% |
| TGCATCTAGGAGAAACAAGT+TGG | + | tig0018481:79189-79208 | Msa1366730:intron | 40.0% | |
| ! | GGAGAAACAAGTTGGAAAAG+GGG | + | tig0018481:79197-79216 | Msa1366730:intron | 40.0% |
| ! | GGGGTGATATTTTCAGCATT+TGG | + | tig0018481:79216-79235 | Msa1366730:intron | 40.0% |
| TTTCAGCATTTGGCTACTTG+AGG | + | tig0018481:79226-79245 | Msa1366730:intron | 40.0% | |
| ATGTTCGTCCAACCAATTCT+AGG | + | tig0018481:79365-79384 | Msa1366730:intron | 40.0% | |
| TGTTGTGATTGCAGATGGTA+TGG | - | tig0018481:79407-79426 | None:intergenic | 40.0% | |
| GGGCAATAAGTTGTGTTCAA+TGG | + | tig0018481:79466-79485 | Msa1366730:intron | 40.0% | |
| AGAAAAAAGCTGAGCGTGAA+AGG | + | tig0018481:79602-79621 | Msa1366730:CDS | 40.0% | |
| ATTACAGGCTGCATATGAGA+AGG | + | tig0018481:79740-79759 | Msa1366730:intron | 40.0% | |
| TCATCTTCCAGTAGAAATCC+AGG | + | tig0018481:79780-79799 | Msa1366730:CDS | 40.0% | |
| CACGGACTCAAATTATTCCT+AGG | + | tig0018481:80114-80133 | Msa1366730:intron | 40.0% | |
| TTCCTAGGAACAACATATCC+AGG | + | tig0018481:80129-80148 | Msa1366730:intron | 40.0% | |
| TTCCTGGATATGTTGTTCCT+AGG | - | tig0018481:80134-80153 | None:intergenic | 40.0% | |
| TTCCCTACTCATGTATTCCT+AGG | + | tig0018481:80388-80407 | Msa1366730:intron | 40.0% | |
| AATAGAGTCCCACAAATGGA+AGG | - | tig0018481:80488-80507 | None:intergenic | 40.0% | |
| ATCGAATAGAGTCCCACAAA+TGG | - | tig0018481:80492-80511 | None:intergenic | 40.0% | |
| ATTTGTGGGACTCTATTCGA+TGG | + | tig0018481:80491-80510 | Msa1366730:intron | 40.0% | |
| TTTGTGGGACTCTATTCGAT+GGG | + | tig0018481:80492-80511 | Msa1366730:intron | 40.0% | |
| CTAAATGCCGTCATCAAATC+AGG | - | tig0018481:80616-80635 | None:intergenic | 40.0% | |
| !!! | GGCAGTTGCCTTTTTTTCAA+AGG | + | tig0018481:80811-80830 | Msa1366730:intron | 40.0% |
| TGATTTCCATAGAGACCATG+TGG | + | tig0018481:80967-80986 | Msa1366730:intron | 40.0% | |
| GGTAGATAACTCCTCTTGTT+TGG | + | tig0018481:81082-81101 | Msa1366730:intron | 40.0% | |
| TTTGTCAACCATCAACCGAT+AGG | + | tig0018481:81234-81253 | Msa1366730:intron | 40.0% | |
| TAAGAGGAATGGGGAAAGAA+GGG | - | tig0018481:81322-81341 | None:intergenic | 40.0% | |
| ATAAGAGGAATGGGGAAAGA+AGG | - | tig0018481:81323-81342 | None:intergenic | 40.0% | |
| ACGGCTAAAATGGGCATATA+CGG | - | tig0018481:81373-81392 | None:intergenic | 40.0% | |
| CATTCAGAAGACGGCTAAAA+TGG | - | tig0018481:81383-81402 | None:intergenic | 40.0% | |
| GATGCTTAGCCAAATTAGCA+GGG | - | tig0018481:81462-81481 | None:intergenic | 40.0% | |
| TGATGCTTAGCCAAATTAGC+AGG | - | tig0018481:81463-81482 | None:intergenic | 40.0% | |
| ! | TTATGCAAGGCCTGTTTTGT+AGG | + | tig0018481:81665-81684 | Msa1366730:three_prime_UTR | 40.0% |
| GTGAGTGAAGTTATGAGACG+GGG | - | tig0018481:75744-75763 | None:intergenic | 45.0% | |
| !! | CGAAGTATTGTCACGGATAC+GGG | + | tig0018481:76124-76143 | Msa1366730:intron | 45.0% |
| GGAAGAAAAAGTGAAGGTGG+AGG | + | tig0018481:76348-76367 | Msa1366730:CDS | 45.0% | |
| AGGATCATCATCAGGCTCAA+CGG | - | tig0018481:76428-76447 | None:intergenic | 45.0% | |
| GATGGGAGACTCTTCTATTG+AGG | + | tig0018481:76548-76567 | Msa1366730:intron | 45.0% | |
| GTTGGCTAAAGCTAAAGCCA+TGG | + | tig0018481:76599-76618 | Msa1366730:CDS | 45.0% | |
| !! | GCCATGGAAGCTATTTCTGA+AGG | + | tig0018481:76615-76634 | Msa1366730:CDS | 45.0% |
| ACTGGGAAGGAATCTAGTAG+TGG | + | tig0018481:76989-77008 | Msa1366730:intron | 45.0% | |
| AAGGAATCTAGTAGTGGCCA+GGG | + | tig0018481:76995-77014 | Msa1366730:intron | 45.0% | |
| AAGATGATAGCCTCGAATCC+TGG | - | tig0018481:77148-77167 | None:intergenic | 45.0% | |
| ATCTTGACAAAGCCCTAGCT+TGG | + | tig0018481:77163-77182 | Msa1366730:intron | 45.0% | |
| CTGGTAGTACACTTGACTTC+AGG | + | tig0018481:77209-77228 | Msa1366730:intron | 45.0% | |
| GACATCTCTTGTGTTGAGTC+TGG | + | tig0018481:77308-77327 | Msa1366730:intron | 45.0% | |
| GTTACATTGTGACGAAGTGG+TGG | - | tig0018481:77408-77427 | None:intergenic | 45.0% | |
| ! | AAATGCAGGTAAGTTGGAGG+AGG | + | tig0018481:77715-77734 | Msa1366730:intron | 45.0% |
| GCATACATTATGGCAGAGGT+AGG | - | tig0018481:77776-77795 | None:intergenic | 45.0% | |
| GTTCGCATACATTATGGCAG+AGG | - | tig0018481:77780-77799 | None:intergenic | 45.0% | |
| GCCATAATGTATGCGAACAG+AGG | + | tig0018481:77782-77801 | Msa1366730:CDS | 45.0% | |
| TATCATGCAGTACAACGGAG+AGG | - | tig0018481:77985-78004 | None:intergenic | 45.0% | |
| GCGAACCCTACATTCGAATA+CGG | + | tig0018481:78429-78448 | Msa1366730:intron | 45.0% | |
| AACCCTACATTCGAATACGG+TGG | + | tig0018481:78432-78451 | Msa1366730:intron | 45.0% | |
| CACCACCGTATTCGAATGTA+GGG | - | tig0018481:78437-78456 | None:intergenic | 45.0% | |
| ACACCACCGTATTCGAATGT+AGG | - | tig0018481:78438-78457 | None:intergenic | 45.0% | |
| TACATTCGAATACGGTGGTG+TGG | + | tig0018481:78437-78456 | Msa1366730:intron | 45.0% | |
| GCTAAAGGATACAAGTCACG+TGG | + | tig0018481:78634-78653 | Msa1366730:CDS | 45.0% | |
| CGTCCAGTTATTGACAAGTG+AGG | - | tig0018481:78893-78912 | None:intergenic | 45.0% | |
| CACTTGTCAATAACTGGACG+TGG | + | tig0018481:78893-78912 | Msa1366730:intron | 45.0% | |
| GTCAATAACTGGACGTGGTA+TGG | + | tig0018481:78898-78917 | Msa1366730:intron | 45.0% | |
| CCTGCTTAATATAGATCCCC+AGG | - | tig0018481:78998-79017 | None:intergenic | 45.0% | |
| CCTGGGGATCTATATTAAGC+AGG | + | tig0018481:78995-79014 | Msa1366730:intron | 45.0% | |
| TACCTAAGTAGATGCCAGCA+TGG | + | tig0018481:79049-79068 | Msa1366730:intron | 45.0% | |
| CATGACTATGTACACCATGC+TGG | - | tig0018481:79066-79085 | None:intergenic | 45.0% | |
| CAGCATGGTGTACATAGTCA+TGG | + | tig0018481:79064-79083 | Msa1366730:intron | 45.0% | |
| ! | TCAGGTGTTGTGATTGCAGA+TGG | - | tig0018481:79412-79431 | None:intergenic | 45.0% |
| ! | AACACCGTCGGAAGTATGAT+AGG | + | tig0018481:79560-79579 | Msa1366730:CDS | 45.0% |
| GCAACCTATCATACTTCCGA+CGG | - | tig0018481:79567-79586 | None:intergenic | 45.0% | |
| TCTTCCAGTAGAAATCCAGG+AGG | + | tig0018481:79783-79802 | Msa1366730:CDS | 45.0% | |
| TGTTCTTTCCCTCTCACACT+TGG | + | tig0018481:80078-80097 | Msa1366730:intron | 45.0% | |
| GTTCTTTCCCTCTCACACTT+GGG | + | tig0018481:80079-80098 | Msa1366730:intron | 45.0% | |
| TTCTTTCCCTCTCACACTTG+GGG | + | tig0018481:80080-80099 | Msa1366730:intron | 45.0% | |
| TTGTGGGACTCTATTCGATG+GGG | + | tig0018481:80493-80512 | Msa1366730:intron | 45.0% | |
| ! | TCAGGACCCTGATTTGATGA+CGG | + | tig0018481:80606-80625 | Msa1366730:intron | 45.0% |
| TGAAGAGCAGCCATAACTTC+TGG | - | tig0018481:80643-80662 | None:intergenic | 45.0% | |
| GTTATGGCTGCTCTTCAAGA+TGG | + | tig0018481:80646-80665 | Msa1366730:CDS | 45.0% | |
| ATTGGTCCACATGGTCTCTA+TGG | - | tig0018481:80976-80995 | None:intergenic | 45.0% | |
| ACCATCAACCGATAGGAATC+TGG | + | tig0018481:81241-81260 | Msa1366730:intron | 45.0% | |
| ! | ACCAGATTCCTATCGGTTGA+TGG | - | tig0018481:81245-81264 | None:intergenic | 45.0% |
| AAGAGGAATGGGGAAAGAAG+GGG | - | tig0018481:81321-81340 | None:intergenic | 45.0% | |
| ! | ATGAGCAAATTTGGAGGTGC+TGG | + | tig0018481:81520-81539 | Msa1366730:CDS | 45.0% |
| !!! | GTTTTTTTATTATATTTTTA+TGG | + | tig0018481:76672-76691 | Msa1366730:intron | 5.0% |
| !!! | TTGTATTTTATTATAAAATA+TGG | + | tig0018481:79500-79519 | Msa1366730:intron | 5.0% |
| !!! | TTTTAAAAAAAAAAATTGTT+TGG | + | tig0018481:80183-80202 | Msa1366730:intron | 5.0% |
| !!! | CGCGGCGTGTTGTTTTCTTT+GGG | - | tig0018481:75792-75811 | None:intergenic | 50.0% |
| AGTCACAGTCTCACACACGA+TGG | + | tig0018481:75816-75835 | Msa1366730:exon | 50.0% | |
| ATCGGCGAGAGTTGAAGGAT+TGG | - | tig0018481:75890-75909 | None:intergenic | 50.0% | |
| TCGCGGAAGAAGGAAAGTGA+AGG | - | tig0018481:75913-75932 | None:intergenic | 50.0% | |
| TTCCTTCTTCCGCGACTATC+TGG | + | tig0018481:75918-75937 | Msa1366730:CDS | 50.0% | |
| TTCCAGATAGTCGCGGAAGA+AGG | - | tig0018481:75923-75942 | None:intergenic | 50.0% | |
| TCTTCCGCGACTATCTGGAA+AGG | + | tig0018481:75923-75942 | Msa1366730:CDS | 50.0% | |
| GTCTCAGACACGTCTTCGAT+CGG | + | tig0018481:76222-76241 | Msa1366730:intron | 50.0% | |
| !! | GATCGGAAGTGTCAGTGCTA+TGG | + | tig0018481:76239-76258 | Msa1366730:intron | 50.0% |
| AGTGAAGGTGGAGGAAGTAG+AGG | + | tig0018481:76357-76376 | Msa1366730:CDS | 50.0% | |
| ! | CTGGACTGGGATCCTTAGAA+GGG | + | tig0018481:76879-76898 | Msa1366730:intron | 50.0% |
| GAAGGAATCTAGTAGTGGCC+AGG | + | tig0018481:76994-77013 | Msa1366730:intron | 50.0% | |
| AATCTAGTAGTGGCCAGGGT+GGG | + | tig0018481:76999-77018 | Msa1366730:intron | 50.0% | |
| TTAACATGTTGGACCCACCC+TGG | - | tig0018481:77015-77034 | None:intergenic | 50.0% | |
| GGTGGGTCCAACATGTTAAG+AGG | + | tig0018481:77016-77035 | Msa1366730:intron | 50.0% | |
| GAACCTAAGACCAGGATTCG+AGG | + | tig0018481:77135-77154 | Msa1366730:intron | 50.0% | |
| ! | TAGCCTCGAATCCTGGTCTT+AGG | - | tig0018481:77141-77160 | None:intergenic | 50.0% |
| AAGCCCTAGCTTGGACTGAT+TGG | + | tig0018481:77172-77191 | Msa1366730:intron | 50.0% | |
| CTGGTATGAATCAAGTGCCC+TGG | - | tig0018481:77483-77502 | None:intergenic | 50.0% | |
| ! | GCATCACGGATTGCAGCATT+AGG | - | tig0018481:77934-77953 | None:intergenic | 50.0% |
| TTCGAATACGGTGGTGTGGA+TGG | + | tig0018481:78441-78460 | Msa1366730:intron | 50.0% | |
| ACGAGCGATGTTAGGTCAGT+GGG | + | tig0018481:78663-78682 | Msa1366730:CDS | 50.0% | |
| GCTGGCATCTACTTAGGTAC+CGG | - | tig0018481:79048-79067 | None:intergenic | 50.0% | |
| CACCATGCTGGCATCTACTT+AGG | - | tig0018481:79054-79073 | None:intergenic | 50.0% | |
| CAACACTTCAGTAGCCGCAA+AGG | + | tig0018481:79134-79153 | Msa1366730:intron | 50.0% | |
| ACCAAATGCCCACAAGCTTG+AGG | + | tig0018481:79537-79556 | Msa1366730:CDS | 50.0% | |
| TCCTCAAGCTTGTGGGCATT+TGG | - | tig0018481:79541-79560 | None:intergenic | 50.0% | |
| ACGGTGTTCCTCAAGCTTGT+GGG | - | tig0018481:79548-79567 | None:intergenic | 50.0% | |
| ACAAGCTTGAGGAACACCGT+CGG | + | tig0018481:79548-79567 | Msa1366730:CDS | 50.0% | |
| TGACAACCTGAGCTTCAGCA+CGG | - | tig0018481:79636-79655 | None:intergenic | 50.0% | |
| CATGCCTCCTGGATTTCTAC+TGG | - | tig0018481:79790-79809 | None:intergenic | 50.0% | |
| TCTTTCCCTCTCACACTTGG+GGG | + | tig0018481:80081-80100 | Msa1366730:intron | 50.0% | |
| GAGACCATGTGGACCAATGA+CGG | + | tig0018481:80978-80997 | Msa1366730:intron | 50.0% | |
| GATTCCGTCATTGGTCCACA+TGG | - | tig0018481:80985-81004 | None:intergenic | 50.0% | |
| GTTTGAGGGAAGGGATGAGA+GGG | + | tig0018481:81061-81080 | Msa1366730:intron | 50.0% | |
| AGAGGAATGGGGAAAGAAGG+GGG | - | tig0018481:81320-81339 | None:intergenic | 50.0% | |
| GCAATTACAGGCGCAACCTT+AGG | - | tig0018481:81493-81512 | None:intergenic | 50.0% | |
| !! | AAATTTGGAGGTGCTGGTGC+TGG | + | tig0018481:81526-81545 | Msa1366730:CDS | 50.0% |
| !!! | GCGCGGCGTGTTGTTTTCTT+TGG | - | tig0018481:75793-75812 | None:intergenic | 55.0% |
| CGTGTGTGAGACTGTGACTG+CGG | - | tig0018481:75815-75834 | None:intergenic | 55.0% | |
| GAAGGATCGGCGAGAGTTGA+AGG | - | tig0018481:75895-75914 | None:intergenic | 55.0% | |
| CGACACTGACACGTTGACAC+CGG | + | tig0018481:76150-76169 | Msa1366730:intron | 55.0% | |
| GAAGGTGGAGGAAGTAGAGG+AGG | + | tig0018481:76360-76379 | Msa1366730:CDS | 55.0% | |
| GAGTCGCGAGTCTTCACAGT+TGG | + | tig0018481:76581-76600 | Msa1366730:CDS | 55.0% | |
| AAAACCCTAGGAGGCTGGAC+TGG | + | tig0018481:76865-76884 | Msa1366730:intron | 55.0% | |
| AAACCCTAGGAGGCTGGACT+GGG | + | tig0018481:76866-76885 | Msa1366730:intron | 55.0% | |
| ! | GCTGGACTGGGATCCTTAGA+AGG | + | tig0018481:76878-76897 | Msa1366730:intron | 55.0% |
| GAATCTAGTAGTGGCCAGGG+TGG | + | tig0018481:76998-77017 | Msa1366730:intron | 55.0% | |
| GGGCCAATCAGTCCAAGCTA+GGG | - | tig0018481:77178-77197 | None:intergenic | 55.0% | |
| AGGGCCAATCAGTCCAAGCT+AGG | - | tig0018481:77179-77198 | None:intergenic | 55.0% | |
| ! | AGCTTGGACTGATTGGCCCT+TGG | + | tig0018481:77179-77198 | Msa1366730:intron | 55.0% |
| ! | GCTTGGACTGATTGGCCCTT+GGG | + | tig0018481:77180-77199 | Msa1366730:intron | 55.0% |
| !! | TACTACCAGTGCCGACCCAA+GGG | - | tig0018481:77198-77217 | None:intergenic | 55.0% |
| TACGGTGGTGTGGATGGAGA+TGG | + | tig0018481:78447-78466 | Msa1366730:intron | 55.0% | |
| GGCATAGCACGAGCGATGTT+AGG | + | tig0018481:78655-78674 | Msa1366730:CDS | 55.0% | |
| CACGAGCGATGTTAGGTCAG+TGG | + | tig0018481:78662-78681 | Msa1366730:CDS | 55.0% | |
| GATGTTAGGTCAGTGGGCAG+AGG | + | tig0018481:78669-78688 | Msa1366730:CDS | 55.0% | |
| GACGGTGTTCCTCAAGCTTG+TGG | - | tig0018481:79549-79568 | None:intergenic | 55.0% | |
| ! | AGAAATCCAGGAGGCATGCC+TGG | + | tig0018481:79792-79811 | Msa1366730:CDS | 55.0% |
| CTTTCCCTCTCACACTTGGG+GGG | + | tig0018481:80082-80101 | Msa1366730:intron | 55.0% | |
| AACACCCCCCAAGTGTGAGA+GGG | - | tig0018481:80089-80108 | None:intergenic | 55.0% | |
| !! | CTTGGGGGGTGTTCGTTTCA+CGG | + | tig0018481:80096-80115 | Msa1366730:intron | 55.0% |
| GGTTTGAGGGAAGGGATGAG+AGG | + | tig0018481:81060-81079 | Msa1366730:intron | 55.0% | |
| GATCCCAGTCCAGCCTCCTA+GGG | - | tig0018481:76872-76891 | None:intergenic | 60.0% | |
| ! | GGACTGATTGGCCCTTGGGT+CGG | + | tig0018481:77184-77203 | Msa1366730:intron | 60.0% |
| !! | GTACTACCAGTGCCGACCCA+AGG | - | tig0018481:77199-77218 | None:intergenic | 60.0% |
| TCAGTGGGCAGAGGCTGCAA+AGG | + | tig0018481:78678-78697 | Msa1366730:CDS | 60.0% | |
| ! | AATCCAGGAGGCATGCCTGG+TGG | + | tig0018481:79795-79814 | Msa1366730:CDS | 60.0% |
| ! | ATCCAGGAGGCATGCCTGGT+GGG | + | tig0018481:79796-79815 | Msa1366730:CDS | 60.0% |
| !! | ATGCCTGGTGGGTTTCCTGG+TGG | + | tig0018481:79807-79826 | Msa1366730:CDS | 60.0% |
| ATGCCACCAGGAAACCCACC+AGG | - | tig0018481:79813-79832 | None:intergenic | 60.0% | |
| TTTCCTGGTGGCATGCCTGG+TGG | + | tig0018481:79819-79838 | Msa1366730:CDS | 60.0% | |
| TTCCTGGTGGCATGCCTGGT+GGG | + | tig0018481:79820-79839 | Msa1366730:CDS | 60.0% | |
| !! | ATGCCTGGTGGGTTTCCTGG+TGG | + | tig0018481:79807-79826 | Msa1366730:CDS | 60.0% |
| ATGCCACCAGGAAACCCACC+AGG | - | tig0018481:79813-79832 | None:intergenic | 60.0% | |
| TTTCCTGGTGGCATGCCAGG+TGG | + | tig0018481:79843-79862 | Msa1366730:CDS | 60.0% | |
| TTCCTGGTGGCATGCCAGGT+GGG | + | tig0018481:79844-79863 | Msa1366730:CDS | 60.0% | |
| ACATTTCCAGGCACCCCTCC+TGG | - | tig0018481:79981-80000 | None:intergenic | 60.0% | |
| GAACACCCCCCAAGTGTGAG+AGG | - | tig0018481:80090-80109 | None:intergenic | 60.0% | |
| GTGAGACTGTGACTGCGGCG+CGG | - | tig0018481:75810-75829 | None:intergenic | 65.0% | |
| GGATCCCAGTCCAGCCTCCT+AGG | - | tig0018481:76873-76892 | None:intergenic | 65.0% | |
| ATTGGCCCTTGGGTCGGCAC+TGG | + | tig0018481:77190-77209 | Msa1366730:intron | 65.0% | |
| ACGTCGCCGTGCTGAAGCTC+AGG | + | tig0018481:79627-79646 | Msa1366730:CDS | 65.0% | |
| AACCCACCAGGCATGCCTCC+TGG | - | tig0018481:79801-79820 | None:intergenic | 65.0% | |
| !! | GGCATGCCTGGTGGGTTTCC+TGG | + | tig0018481:79804-79823 | Msa1366730:CDS | 65.0% |
| GGGTTTCCTGGTGGCATGCC+TGG | + | tig0018481:79816-79835 | Msa1366730:CDS | 65.0% | |
| AACCCACCAGGCATGCCACC+AGG | - | tig0018481:79825-79844 | None:intergenic | 65.0% | |
| !! | GGCATGCCTGGTGGGTTTCC+TGG | + | tig0018481:79804-79823 | Msa1366730:CDS | 65.0% |
| GGGTTTCCTGGTGGCATGCC+AGG | + | tig0018481:79816-79835 | Msa1366730:CDS | 65.0% | |
| AACCCACCTGGCATGCCACC+AGG | - | tig0018481:79849-79868 | None:intergenic | 65.0% | |
| CAGGCATGCCTCCAGCTCCA+GGG | - | tig0018481:79872-79891 | None:intergenic | 65.0% | |
| GGCATGCCTGGTGGTTTCCC+TGG | + | tig0018481:79882-79901 | Msa1366730:CDS | 65.0% | |
| CCAGCTCCAGGGAAACCACC+AGG | - | tig0018481:79891-79910 | None:intergenic | 65.0% | |
| CCTGGTGGTTTCCCTGGAGC+TGG | + | tig0018481:79888-79907 | Msa1366730:CDS | 65.0% | |
| GGTGGTTTCCCTGGAGCTGG+AGG | + | tig0018481:79891-79910 | Msa1366730:CDS | 65.0% | |
| CTGGCATGCCTCCAGCTCCA+GGG | - | tig0018481:79902-79921 | None:intergenic | 65.0% | |
| CTGGCATGCCTCCAGCTCCA+GGG | - | tig0018481:79902-79921 | None:intergenic | 65.0% | |
| CAGGTGGCTTCCCTGGTGCT+GGG | + | tig0018481:79949-79968 | Msa1366730:CDS | 65.0% | |
| ! | AGGTGGCTTCCCTGGTGCTG+GGG | + | tig0018481:79950-79969 | Msa1366730:CDS | 65.0% |
| ! | GGCATGCCAGGTGGGTTCCC+TGG | + | tig0018481:79852-79871 | Msa1366730:CDS | 70.0% |
| CCAGCTCCAGGGAACCCACC+TGG | - | tig0018481:79861-79880 | None:intergenic | 70.0% | |
| ! | CCAGGTGGGTTCCCTGGAGC+TGG | + | tig0018481:79858-79877 | Msa1366730:CDS | 70.0% |
| ! | GGTGGGTTCCCTGGAGCTGG+AGG | + | tig0018481:79861-79880 | Msa1366730:CDS | 70.0% |
| CCAGGCATGCCTCCAGCTCC+AGG | - | tig0018481:79873-79892 | None:intergenic | 70.0% | |
| ! | CCTGGAGCTGGAGGCATGCC+TGG | + | tig0018481:79870-79889 | Msa1366730:CDS | 70.0% |
| ! | GGAGCTGGAGGCATGCCTGG+TGG | + | tig0018481:79873-79892 | Msa1366730:CDS | 70.0% |
| CCTGGCATGCCTCCAGCTCC+AGG | - | tig0018481:79903-79922 | None:intergenic | 70.0% | |
| ! | CCTGGAGCTGGAGGCATGCC+AGG | + | tig0018481:79870-79889 | Msa1366730:CDS | 70.0% |
| ! | GGAGCTGGAGGCATGCCAGG+TGG | + | tig0018481:79903-79922 | Msa1366730:CDS | 70.0% |
| GGCATGCCAGGTGGCTTCCC+TGG | + | tig0018481:79912-79931 | Msa1366730:CDS | 70.0% | |
| CCAGCTCCAGGGAAGCCACC+TGG | - | tig0018481:79921-79940 | None:intergenic | 70.0% | |
| CCAGGTGGCTTCCCTGGAGC+TGG | + | tig0018481:79918-79937 | Msa1366730:CDS | 70.0% | |
| GGTGGCTTCCCTGGAGCTGG+AGG | + | tig0018481:79921-79940 | Msa1366730:CDS | 70.0% | |
| CCTGGCATGCCTCCAGCTCC+AGG | - | tig0018481:79903-79922 | None:intergenic | 70.0% | |
| ! | CCTGGAGCTGGAGGCATGCC+AGG | + | tig0018481:79870-79889 | Msa1366730:CDS | 70.0% |
| ! | GGAGCTGGAGGCATGCCAGG+TGG | + | tig0018481:79903-79922 | Msa1366730:CDS | 70.0% |
| GGCATGCCAGGTGGCTTCCC+TGG | + | tig0018481:79912-79931 | Msa1366730:CDS | 70.0% | |
| CCAGCACCAGGGAAGCCACC+TGG | - | tig0018481:79951-79970 | None:intergenic | 70.0% | |
| CCAGGTGGCTTCCCTGGTGC+TGG | + | tig0018481:79948-79967 | Msa1366730:CDS | 70.0% | |
| ! | GGTGGCTTCCCTGGTGCTGG+GGG | + | tig0018481:79951-79970 | Msa1366730:CDS | 70.0% |
| CTGGCATGCCCCCAGCACCA+GGG | - | tig0018481:79962-79981 | None:intergenic | 70.0% | |
| ! | GTGCTGGGGGCATGCCAGGA+GGG | + | tig0018481:79964-79983 | Msa1366730:CDS | 70.0% |
| ! | TGCTGGGGGCATGCCAGGAG+GGG | + | tig0018481:79965-79984 | Msa1366730:CDS | 70.0% |
| CCTGGCATGCCCCCAGCACC+AGG | - | tig0018481:79963-79982 | None:intergenic | 75.0% | |
| ! | CCTGGTGCTGGGGGCATGCC+AGG | + | tig0018481:79960-79979 | Msa1366730:CDS | 75.0% |
| ! | GGTGCTGGGGGCATGCCAGG+AGG | + | tig0018481:79963-79982 | Msa1366730:CDS | 75.0% |
| !! | GGCATGCCAGGAGGGGTGCC+TGG | + | tig0018481:79972-79991 | Msa1366730:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0018481 | gene | 75730 | 81773 | 75730 | ID=Msa1366730;Name=Msa1366730 |
| tig0018481 | mRNA | 75730 | 81773 | 75730 | ID=Msa1366730-mRNA-1;Parent=Msa1366730;Name=Msa1366730-mRNA-1;_AED=0.05;_eAED=0.05;_QI=105|1|0.90|1|1|1|11|215|410 |
| tig0018481 | exon | 75730 | 75944 | 75730 | ID=Msa1366730-mRNA-1:exon:15203;Parent=Msa1366730-mRNA-1 |
| tig0018481 | exon | 76032 | 76071 | 76032 | ID=Msa1366730-mRNA-1:exon:15204;Parent=Msa1366730-mRNA-1 |
| tig0018481 | exon | 76310 | 76456 | 76310 | ID=Msa1366730-mRNA-1:exon:15205;Parent=Msa1366730-mRNA-1 |
| tig0018481 | exon | 76549 | 76636 | 76549 | ID=Msa1366730-mRNA-1:exon:15206;Parent=Msa1366730-mRNA-1 |
| tig0018481 | exon | 77723 | 77803 | 77723 | ID=Msa1366730-mRNA-1:exon:15207;Parent=Msa1366730-mRNA-1 |
| tig0018481 | exon | 77905 | 77969 | 77905 | ID=Msa1366730-mRNA-1:exon:15208;Parent=Msa1366730-mRNA-1 |
| tig0018481 | exon | 78619 | 78759 | 78619 | ID=Msa1366730-mRNA-1:exon:15209;Parent=Msa1366730-mRNA-1 |
| tig0018481 | exon | 79532 | 79648 | 79532 | ID=Msa1366730-mRNA-1:exon:15210;Parent=Msa1366730-mRNA-1 |
| tig0018481 | exon | 79747 | 80022 | 79747 | ID=Msa1366730-mRNA-1:exon:15211;Parent=Msa1366730-mRNA-1 |
| tig0018481 | exon | 80610 | 80667 | 80610 | ID=Msa1366730-mRNA-1:exon:15212;Parent=Msa1366730-mRNA-1 |
| tig0018481 | exon | 81449 | 81773 | 81449 | ID=Msa1366730-mRNA-1:exon:15213;Parent=Msa1366730-mRNA-1 |
| tig0018481 | five_prime_UTR | 75730 | 75834 | 75730 | ID=Msa1366730-mRNA-1:five_prime_utr;Parent=Msa1366730-mRNA-1 |
| tig0018481 | CDS | 75835 | 75944 | 75835 | ID=Msa1366730-mRNA-1:cds;Parent=Msa1366730-mRNA-1 |
| tig0018481 | CDS | 76032 | 76071 | 76032 | ID=Msa1366730-mRNA-1:cds;Parent=Msa1366730-mRNA-1 |
| tig0018481 | CDS | 76310 | 76456 | 76310 | ID=Msa1366730-mRNA-1:cds;Parent=Msa1366730-mRNA-1 |
| tig0018481 | CDS | 76549 | 76636 | 76549 | ID=Msa1366730-mRNA-1:cds;Parent=Msa1366730-mRNA-1 |
| tig0018481 | CDS | 77723 | 77803 | 77723 | ID=Msa1366730-mRNA-1:cds;Parent=Msa1366730-mRNA-1 |
| tig0018481 | CDS | 77905 | 77969 | 77905 | ID=Msa1366730-mRNA-1:cds;Parent=Msa1366730-mRNA-1 |
| tig0018481 | CDS | 78619 | 78759 | 78619 | ID=Msa1366730-mRNA-1:cds;Parent=Msa1366730-mRNA-1 |
| tig0018481 | CDS | 79532 | 79648 | 79532 | ID=Msa1366730-mRNA-1:cds;Parent=Msa1366730-mRNA-1 |
| tig0018481 | CDS | 79747 | 80022 | 79747 | ID=Msa1366730-mRNA-1:cds;Parent=Msa1366730-mRNA-1 |
| tig0018481 | CDS | 80610 | 80667 | 80610 | ID=Msa1366730-mRNA-1:cds;Parent=Msa1366730-mRNA-1 |
| tig0018481 | CDS | 81449 | 81558 | 81449 | ID=Msa1366730-mRNA-1:cds;Parent=Msa1366730-mRNA-1 |
| tig0018481 | three_prime_UTR | 81559 | 81773 | 81559 | ID=Msa1366730-mRNA-1:three_prime_utr;Parent=Msa1366730-mRNA-1 |
| Gene Sequence |
| Protein sequence |
