AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1083360

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1083360 MtrunA17_Chr7g0271391 99.373 638 4 0 1 638 1 638 0.0 1305
Msa1083360 MtrunA17_Chr7g0270601 75.776 161 38 1 12 171 6 166 4.57e-78 256
Msa1083360 MtrunA17_Chr7g0270601 50.000 172 86 0 461 632 292 463 6.53e-47 172
Msa1083360 MtrunA17_Chr3g0098211 48.718 156 76 3 19 173 176 328 2.17e-39 148
Msa1083360 MtrunA17_Chr3g0098211 44.667 150 79 2 17 164 10 157 2.75e-25 107
Msa1083360 MtrunA17_Chr3g0129561 46.980 149 79 0 17 165 55 203 3.23e-38 152
Msa1083360 MtrunA17_Chr1g0155901 43.452 168 85 4 11 169 2 168 6.15e-31 119
Msa1083360 MtrunA17_Chr4g0044701 34.286 245 129 6 19 245 48 278 6.02e-29 121
Msa1083360 MtrunA17_Chr8g0338201 37.037 162 82 5 18 165 33 188 9.13e-21 96.7
Msa1083360 MtrunA17_Chr8g0338651 35.443 158 82 4 22 165 35 186 1.18e-18 90.1
Msa1083360 MtrunA17_Chr4g0055131 35.404 161 85 4 19 165 40 195 4.73e-18 87.8
Msa1083360 MtrunA17_Chr7g0269191 46.000 100 53 1 534 632 9 108 6.80e-18 79.7
Msa1083360 MtrunA17_Chr7g0247681 38.136 118 66 3 54 165 2 118 4.39e-12 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1083360 AT5G61190.4 58.462 260 81 5 8 265 2 236 1.90e-87 288
Msa1083360 AT5G61190.2 58.462 260 81 5 8 265 2 236 1.90e-87 288
Msa1083360 AT3G62200.1 79.762 168 34 0 10 177 21 188 3.11e-87 286
Msa1083360 AT5G61190.8 58.462 260 81 5 8 265 2 236 1.15e-86 289
Msa1083360 AT5G61190.11 58.462 260 81 5 8 265 2 236 5.19e-86 289
Msa1083360 AT5G61190.1 69.307 202 60 2 8 207 2 203 5.81e-86 290
Msa1083360 AT5G61190.10 69.307 202 60 2 8 207 2 203 8.63e-86 289
Msa1083360 AT5G61190.6 58.462 260 81 5 8 265 2 236 1.65e-85 289
Msa1083360 AT5G61190.5 58.462 260 81 5 8 265 2 236 1.67e-85 289
Msa1083360 AT5G61190.9 69.307 202 60 2 8 207 2 203 1.82e-85 289
Msa1083360 AT3G62210.1 73.333 180 45 1 5 181 10 189 1.86e-85 269
Msa1083360 AT5G61180.1 60.674 178 52 1 9 168 72 249 1.25e-69 231
Msa1083360 AT3G61028.3 45.181 166 88 3 15 177 78 243 1.95e-43 157
Msa1083360 AT3G61028.1 45.181 166 88 3 15 177 78 243 1.95e-43 157
Msa1083360 AT3G60940.1 47.429 175 83 3 12 177 76 250 3.86e-43 156
Msa1083360 AT3G60940.2 47.429 175 83 3 12 177 76 250 3.86e-43 156
Msa1083360 AT5G64710.1 42.138 159 91 1 11 168 54 212 1.18e-37 150
Msa1083360 AT5G09840.1 41.935 155 90 0 11 165 65 219 2.86e-37 149
Msa1083360 AT5G61190.7 66.055 109 35 2 101 207 1 109 2.21e-35 143
Msa1083360 AT5G61190.3 66.055 109 35 2 101 207 1 109 2.21e-35 143
Msa1083360 AT2G15560.2 41.290 155 87 3 15 165 46 200 4.55e-27 115
Msa1083360 AT2G15560.1 41.290 155 87 3 15 165 46 200 4.96e-27 115
Msa1083360 AT3G62850.1 30.841 214 131 6 9 211 230 437 6.86e-22 99.8
Msa1083360 AT3G62850.1 31.210 157 102 2 10 163 7 160 3.57e-18 88.2
Msa1083360 AT3G61028.2 40.517 116 67 2 15 128 78 193 1.08e-21 95.5
Msa1083360 AT3G62050.1 36.434 129 73 3 14 139 9 131 4.28e-20 88.2
Msa1083360 AT5G35640.1 31.111 135 88 2 17 147 32 165 7.28e-15 73.9
Msa1083360 AT3G61090.1 29.480 173 106 5 18 180 12 178 2.13e-14 72.4
Msa1083360 AT5G64710.2 41.463 82 47 1 88 168 6 87 3.65e-14 76.3
Msa1083360 AT3G62460.1 29.927 137 88 3 18 149 58 191 6.53e-12 65.5
Msa1083360 AT1G01355.1 32.450 151 96 3 28 174 11 159 1.39e-11 65.1
Msa1083360 AT3G56730.6 33.019 106 65 1 15 120 7 106 2.53e-11 63.2
Msa1083360 AT3G61100.1 28.485 165 98 5 18 170 8 164 2.93e-11 62.8
Msa1083360 AT3G56730.2 30.357 112 72 1 9 120 9 114 3.83e-11 62.8
Msa1083360 AT3G56730.3 30.357 112 72 1 9 120 9 114 3.83e-11 62.8
Msa1083360 AT1G01355.3 31.788 151 93 3 28 174 11 155 4.30e-11 63.5
Msa1083360 AT3G56730.1 32.692 104 64 1 17 120 11 108 8.34e-11 61.6
Msa1083360 AT5G64450.1 35.000 120 64 6 52 162 34 148 9.09e-11 61.6

Find 277 sgRNAs with CRISPR-Local

Find 356 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCGAATTATTTATTGATTT+CGG 0.150955 7_2:-83652139 Msa1083360:CDS
GCGAATTATTTATTGATTTC+GGG 0.173410 7_2:-83652138 Msa1083360:CDS
GGAAAACCGTTTGGTCTTAA+TGG 0.186135 7_2:+83651514 None:intergenic
AACAGCACTCCAAAGAAATT+TGG 0.210078 7_2:-83650829 Msa1083360:CDS
CCAATATCTGGCACAGTTCT+AGG 0.226868 7_2:+83651382 None:intergenic
AATTCGTCGTCGGAGATAAA+TGG 0.230773 7_2:-83650246 Msa1083360:three_prime_UTR
GTTGCAAAAGTATGGGAATT+TGG 0.231833 7_2:+83651454 None:intergenic
GGGATTTGATTCTAGATATC+AGG 0.233096 7_2:-83651809 Msa1083360:CDS
TCCTTGTCGACATGCTGTTC+TGG 0.237109 7_2:-83652182 Msa1083360:CDS
AATTTCGTCCCAAATTTCTT+TGG 0.251306 7_2:+83650820 None:intergenic
ATACTTATATAGATAAAATT+AGG 0.259196 7_2:-83653500 Msa1083360:five_prime_UTR
GGTCTTAATGGCTGGGAATA+TGG 0.268984 7_2:+83651526 None:intergenic
ATTTCTTTGGAGTGCTGTTT+AGG 0.279080 7_2:+83650833 None:intergenic
GAATATGTACAAGGCCTTAT+AGG 0.288105 7_2:-83651091 Msa1083360:CDS
CCATACCAAACTGTAGTATT+TGG 0.290881 7_2:+83650179 None:intergenic
TTATCCGGAAATACAGCTTT+TGG 0.291189 7_2:-83649551 Msa1083360:three_prime_UTR
TTTCAGGGTGTATTGTAAAA+TGG 0.292307 7_2:-83649869 Msa1083360:three_prime_UTR
AGCGTCAAATGAACAAATTC+TGG 0.298140 7_2:+83649842 None:intergenic
CTGGCTCTATATACTGAATT+TGG 0.300005 7_2:-83649524 Msa1083360:three_prime_UTR
AAGTTTCCATTACCATAATC+AGG 0.300984 7_2:+83650442 None:intergenic
ATACGACAGCAATTGGAAAA+AGG 0.302939 7_2:-83653748 Msa1083360:five_prime_UTR
CAAACTCTTAATTTGCTATC+TGG 0.304458 7_2:-83649723 Msa1083360:three_prime_UTR
ACATCCAAAAGCTGTATTTC+CGG 0.304877 7_2:+83649547 None:intergenic
TGTACATATTCAGAAGGTTT+AGG 0.309220 7_2:+83651103 None:intergenic
CCTAGAACTGTGCCAGATAT+TGG 0.310900 7_2:-83651382 Msa1083360:CDS
TGCTGGTAGATCGGCAATAA+TGG 0.316014 7_2:-83650777 Msa1083360:CDS
GCATAGCAGCACCCTGATTA+TGG 0.320572 7_2:-83650454 Msa1083360:exon
ACCTCCTCATTCGCAGTTGA+TGG 0.324550 7_2:+83652091 None:intergenic
CCGGTGTAGTTGCAAAAGTA+TGG 0.328541 7_2:+83651446 None:intergenic
AATGGTAAGTGGGGATCTTC+AGG 0.332723 7_2:-83651130 Msa1083360:CDS
CCCGAGTCAAACCCCGATTC+AGG 0.333358 7_2:-83650490 Msa1083360:CDS
CCAGCATGAATTTCAGAATA+GGG 0.333740 7_2:+83651859 None:intergenic
GCATGTGGATCGGAGCCTTT+AGG 0.345450 7_2:+83653318 None:intergenic
ATTTAAATTTACATTTGCTT+TGG 0.350575 7_2:-83649420 Msa1083360:three_prime_UTR
AATAATAAACTTCCCTCTAA+TGG 0.351040 7_2:-83651148 Msa1083360:CDS
AGATCAACGAATGAACAAAA+TGG 0.352005 7_2:-83651250 Msa1083360:CDS
ATATTTCCTTCAATCTATCT+TGG 0.354451 7_2:-83649946 Msa1083360:three_prime_UTR
ACAAGGTATGTTTATTATGA+TGG 0.355179 7_2:-83649692 Msa1083360:three_prime_UTR
ATGTTCAGATTGCCAATATC+TGG 0.357086 7_2:+83651370 None:intergenic
CACTTAAAATTGCACAAGAT+TGG 0.358644 7_2:-83649768 Msa1083360:three_prime_UTR
AACATCGGTGTTGCGATGCT+TGG 0.359132 7_2:+83650979 None:intergenic
CCTTATTAGACTGGACTACT+TGG 0.359523 7_2:-83650023 Msa1083360:three_prime_UTR
CGGTTATCTTGAAGTCCAAC+TGG 0.361639 7_2:+83651727 None:intergenic
GATAATTGTTTACATTATTA+CGG 0.362001 7_2:+83651707 None:intergenic
GATCCATTATGGAGCAATAA+TGG 0.362238 7_2:-83651616 Msa1083360:CDS
CCAAGTAGTCCAGTCTAATA+AGG 0.362296 7_2:+83650023 None:intergenic
GATCCACTTTGAGGAACATT+TGG 0.363780 7_2:+83651667 None:intergenic
TTACCATTATTGCTCCATAA+TGG 0.363932 7_2:+83651613 None:intergenic
TGTTCATTCGTTGATCTTAC+CGG 0.368690 7_2:+83651256 None:intergenic
AGAATCATTCGAATAATTAC+TGG 0.374269 7_2:+83650362 None:intergenic
AACCGTTTGGTCTTAATGGC+TGG 0.379988 7_2:+83651518 None:intergenic
AGGAAATCATCAAAATCAAC+AGG 0.380452 7_2:-83651584 Msa1083360:CDS
ATTGGCAATCTGAACATATC+TGG 0.381321 7_2:-83651364 Msa1083360:CDS
CGAGCAAAATGTATATTTGT+AGG 0.381945 7_2:+83650056 None:intergenic
TGCTGCTCAGACACAGCAAC+AGG 0.385298 7_2:-83651887 Msa1083360:CDS
AGGAAATATCTCGACACATT+TGG 0.387421 7_2:+83649960 None:intergenic
AGATCCCCACTTACCATTAG+AGG 0.389364 7_2:+83651135 None:intergenic
AACATGATTAAGTGAAATTC+CGG 0.391711 7_2:+83653176 None:intergenic
GGGAAATCATCAAAATCAAC+AGG 0.391798 7_2:-83651563 Msa1083360:CDS
TTCATGGCTTTCGGTCCATT+TGG 0.392243 7_2:+83651757 None:intergenic
GGAAGTGGAGCACTACTCTT+AGG 0.394120 7_2:+83651277 None:intergenic
TCTCGTATGAATCAAACTAT+AGG 0.394834 7_2:-83650333 Msa1083360:three_prime_UTR
AATAAATAATTCGCAGGTGC+AGG 0.398280 7_2:+83652147 None:intergenic
CCATTGCATACGACAGCAAT+TGG 0.398911 7_2:-83653755 Msa1083360:five_prime_UTR
TTCGTTGATCTTACCGGAAG+TGG 0.402973 7_2:+83651262 None:intergenic
TTCGGTCCATTTGGTTGACT+CGG 0.404852 7_2:+83651766 None:intergenic
CAGCTAAGAGTGTATGGCTT+TGG 0.407793 7_2:-83652017 Msa1083360:CDS
AGCAAATGTAAATTTAAATA+CGG 0.409351 7_2:+83649424 None:intergenic
TAAGAGTAGTGCTCCACTTC+CGG 0.410866 7_2:-83651275 Msa1083360:CDS
TCTTGCGTATTGCATGGGTT+TGG 0.412229 7_2:+83653790 None:intergenic
CAAGTAAAACAACACCTATA+AGG 0.412949 7_2:+83651077 None:intergenic
TTCGAAGTTTCAAATGTTGC+AGG 0.413026 7_2:-83649814 Msa1083360:three_prime_UTR
TCAGAAGTCACCCCTGAATC+GGG 0.413185 7_2:+83650478 None:intergenic
ACTCCGTTGCGGAACAGTGC+GGG 0.413493 7_2:+83651318 None:intergenic
TATGATGTTGAATAATTATC+CGG 0.413966 7_2:-83649566 Msa1083360:three_prime_UTR
GAGTGTGTAGGTTGATATTC+TGG 0.418613 7_2:+83651184 None:intergenic
TATCTCCGACGACGAATTGA+AGG 0.419671 7_2:+83650251 None:intergenic
GATCCACTGTGATGTATAAC+GGG 0.419901 7_2:+83650135 None:intergenic
ACAGCACTCCAAAGAAATTT+GGG 0.420086 7_2:-83650828 Msa1083360:CDS
CAGCTACCACTGACATTAAG+AGG 0.421531 7_2:+83649457 None:intergenic
CCTTGTCGACATGCTGTTCT+GGG 0.422266 7_2:-83652181 Msa1083360:CDS
CTTCTCAGTTGGCATCATCT+TGG 0.424167 7_2:+83651033 None:intergenic
ACATCACAGTGGATCTATCT+TGG 0.424998 7_2:-83650127 Msa1083360:three_prime_UTR
GCGCCAATTCTGATCCATTA+TGG 0.426102 7_2:-83651627 Msa1083360:CDS
CGAATAATTACTGGTCCAAC+TGG 0.427304 7_2:+83650371 None:intergenic
GCTCCATAATGGATCAGAAT+TGG 0.428216 7_2:+83651624 None:intergenic
CAGCACCCTGATTATGGTAA+TGG 0.428511 7_2:-83650448 Msa1083360:three_prime_UTR
CAACAAATACAAGTGAAAAC+TGG 0.432305 7_2:+83649265 None:intergenic
CCAATTGCTGTCGTATGCAA+TGG 0.432591 7_2:+83653755 None:intergenic
TAGTAAAGGTGAAGAGATTG+AGG 0.432786 7_2:+83653610 None:intergenic
ATATCTGGTTATCCCAATAA+TGG 0.432994 7_2:-83651349 Msa1083360:CDS
TTGAGGTGGAGAGTAGTGTT+TGG 0.441638 7_2:+83653823 None:intergenic
GTATACGACGGCGAAGATAT+CGG 0.442192 7_2:-83653370 Msa1083360:CDS
TTGGTGATTTAGTCGCGAAT+TGG 0.443335 7_2:-83649505 Msa1083360:three_prime_UTR
TGAAGAGACTACACAAGATT+CGG 0.443416 7_2:+83653668 None:intergenic
CTAAATTCTTCATTGTATCA+TGG 0.446475 7_2:-83649228 Msa1083360:three_prime_UTR
ACATCGGTGTTGCGATGCTT+GGG 0.448328 7_2:+83650980 None:intergenic
GTCAGAAGTCACCCCTGAAT+CGG 0.449046 7_2:+83650477 None:intergenic
GAATGAACAAAATGGACATA+TGG 0.450541 7_2:-83651242 Msa1083360:CDS
CCCTGAATCGGGGTTTGACT+CGG 0.450927 7_2:+83650489 None:intergenic
TCAGCAACAAGAAATGCAAC+GGG 0.451131 7_2:+83649604 None:intergenic
AAATACCAAATACTACAGTT+TGG 0.452518 7_2:-83650184 Msa1083360:three_prime_UTR
TCCAGCATGAATTTCAGAAT+AGG 0.452577 7_2:+83651858 None:intergenic
TTTCTTCTTGCGTATTGCAT+GGG 0.457197 7_2:+83653785 None:intergenic
TATGAATTACTAGGTGCAAA+AGG 0.459744 7_2:+83651481 None:intergenic
TTTAGTCGCGAATTGGTCTC+TGG 0.459938 7_2:-83649498 Msa1083360:three_prime_UTR
ACCGTTTGGTCTTAATGGCT+GGG 0.462546 7_2:+83651519 None:intergenic
CTTTGGACTACTCTCTTAGC+TGG 0.463279 7_2:-83652000 Msa1083360:CDS
TGTGTATCACCACTGGTTAG+TGG 0.463529 7_2:+83651970 None:intergenic
GGAGTTCTTCCTTATTAGAC+TGG 0.465053 7_2:-83650032 Msa1083360:three_prime_UTR
TGGATAATTCATCAGCAGTC+TGG 0.469032 7_2:-83650538 Msa1083360:CDS
TGCTGTCGTATGCAATGGGT+CGG 0.469423 7_2:+83653760 None:intergenic
ATGGTGGTAAAACAAAATTT+AGG 0.469766 7_2:-83650923 Msa1083360:CDS
CCCTCCATCAACTGCGAATG+AGG 0.471098 7_2:-83652095 Msa1083360:CDS
GGAGCACTACTCTTAGGATT+CGG 0.471163 7_2:+83651283 None:intergenic
CAATTGCTGTCGTATGCAAT+GGG 0.472372 7_2:+83653756 None:intergenic
CGACATGCTGTTCTGGGCAG+TGG 0.473730 7_2:-83652175 Msa1083360:CDS
ATAACTGATAGCATCCGTTA+TGG 0.474762 7_2:-83651007 Msa1083360:CDS
ATTGGCGCGCTCAAAGTTTG+TGG 0.477749 7_2:+83651642 None:intergenic
TAGCGATCAATTTGTTTGAT+CGG 0.477979 7_2:-83649313 Msa1083360:three_prime_UTR
TTGCAGCAGCTAAGAGTGTA+TGG 0.479275 7_2:-83652023 Msa1083360:CDS
ACATTTGGATTATAGTTGCC+AGG 0.480104 7_2:+83651682 None:intergenic
GGTTGCAATGGAAAACCGTT+TGG 0.481798 7_2:+83651505 None:intergenic
GGTGTCACCGTAGGCGGAGA+TGG 0.483267 7_2:+83653239 None:intergenic
GTTGCATTTCTTGTTGCTGA+TGG 0.483586 7_2:-83649601 Msa1083360:three_prime_UTR
TAAGATCAGATGGGCGGAGG+TGG 0.484744 7_2:-83653417 Msa1083360:exon
TCAGTTATATTCTTCTCAGT+TGG 0.486950 7_2:+83651022 None:intergenic
AACTTCCCTCTAATGGTAAG+TGG 0.488285 7_2:-83651141 Msa1083360:CDS
TTAGTTTGAATCGATCTTTG+TGG 0.488974 7_2:-83653467 Msa1083360:five_prime_UTR
CCGTAGGCGGAGATGGAAAC+GGG 0.489402 7_2:+83653246 None:intergenic
TCTATCTTGGTGACCAACCT+TGG 0.490918 7_2:-83649933 Msa1083360:three_prime_UTR
CCCGTTTCCATCTCCGCCTA+CGG 0.493859 7_2:-83653246 Msa1083360:CDS
GAAAACTGTCATGTTCCTAA+AGG 0.494196 7_2:-83653333 Msa1083360:CDS
TGGAAGTGTGTAAATCCCTT+AGG 0.494619 7_2:-83650863 Msa1083360:CDS
CAAATGTTCAAAACGGAGGA+AGG 0.495613 7_2:-83651831 Msa1083360:CDS
CTGTTTAGGATTTCCACCTA+AGG 0.496032 7_2:+83650847 None:intergenic
TATCAAATATATCACTAAAA+CGG 0.496693 7_2:+83649998 None:intergenic
CCTACACACTCGACAGCAAT+GGG 0.496891 7_2:-83651172 Msa1083360:CDS
TTGGTAAGAATGACAAACTC+TGG 0.500710 7_2:-83650883 Msa1083360:CDS
AAATTGTTGCCAACAGTCCT+AGG 0.502255 7_2:+83651418 None:intergenic
CCGAGTCAAACCCCGATTCA+GGG 0.503212 7_2:-83650489 Msa1083360:CDS
CCCTATTCTGAAATTCATGC+TGG 0.505000 7_2:-83651859 Msa1083360:CDS
TTTGGAGAATATGAATTACT+AGG 0.506209 7_2:+83651472 None:intergenic
AACAACCCCTGCTGGTAGAT+CGG 0.506607 7_2:-83650786 Msa1083360:CDS
CTCCGTTGCGGAACAGTGCG+GGG 0.510872 7_2:+83651319 None:intergenic
TCGGTCCATTTGGTTGACTC+GGG 0.511015 7_2:+83651767 None:intergenic
ACCGTAGGCGGAGATGGAAA+CGG 0.511972 7_2:+83653245 None:intergenic
AATCCAAATGTTCCTCAAAG+TGG 0.513048 7_2:-83651670 Msa1083360:CDS
AGATCCACTGTGATGTATAA+CGG 0.515531 7_2:+83650134 None:intergenic
TATGGTAATGGAAACTTGAA+AGG 0.516440 7_2:-83650436 Msa1083360:three_prime_UTR
AATGTTCAAAACGGAGGAAG+GGG 0.517066 7_2:-83651829 Msa1083360:CDS
TAATTCATCAGCAGTCTGGC+TGG 0.517933 7_2:-83650534 Msa1083360:CDS
TAATTACTGGTCCAACTGGC+TGG 0.519557 7_2:+83650375 None:intergenic
CCAAATACTACAGTTTGGTA+TGG 0.522466 7_2:-83650179 Msa1083360:three_prime_UTR
CTATTGCCTCTTAATGTCAG+TGG 0.523753 7_2:-83649463 Msa1083360:three_prime_UTR
TGACTCGGGTTTCTCCAAGT+TGG 0.524058 7_2:+83651781 None:intergenic
TATTTCTGTAGGTATGAAGC+AGG 0.525565 7_2:-83650646 Msa1083360:intron
CCTGAATCGGGGTTTGACTC+GGG 0.525798 7_2:+83650490 None:intergenic
GTTGGCAACAATTTCAGTAC+AGG 0.526636 7_2:-83651409 Msa1083360:CDS
TCCCAGCCATTAAGACCAAA+CGG 0.527762 7_2:-83651520 Msa1083360:CDS
TTTGTGGTTGATCCACTTTG+AGG 0.528704 7_2:+83651658 None:intergenic
CAACTACACCGGTGCCACCT+AGG 0.529046 7_2:-83651435 Msa1083360:CDS
GATATCAGGGTAGACCAACT+TGG 0.529804 7_2:-83651795 Msa1083360:CDS
TTGGATTGAGAGACTTGAGG+TGG 0.530189 7_2:+83653809 None:intergenic
ATTATTGCCGATCTACCAGC+AGG 0.530418 7_2:+83650779 None:intergenic
CACCGATGTTAAGAAAGCTC+TGG 0.531404 7_2:-83650966 Msa1083360:CDS
ACTTCCCTCTAATGGTAAGT+GGG 0.534715 7_2:-83651140 Msa1083360:CDS
GGAAATTCAAATGTTCAAAA+CGG 0.536448 7_2:-83651838 Msa1083360:CDS
GATCTTTGTGGAATTAAGAT+CGG 0.538325 7_2:-83653455 Msa1083360:five_prime_UTR
GAAAGCTCTGGAGAGTGCTA+TGG 0.538754 7_2:-83650954 Msa1083360:CDS
CCAACAGTCCTAGGTGGCAC+CGG 0.539658 7_2:+83651427 None:intergenic
AGTAAAGGTGAAGAGATTGA+GGG 0.541297 7_2:+83653611 None:intergenic
ACAGTTTGGTATGGTTGCTG+AGG 0.542168 7_2:-83650170 Msa1083360:three_prime_UTR
ACCTACACACTCGACAGCAA+TGG 0.545629 7_2:-83651173 Msa1083360:CDS
AGATCGGAGATAAGATCAGA+TGG 0.545923 7_2:-83653427 Msa1083360:exon
GCTGTCGTATGCAATGGGTC+GGG 0.547190 7_2:+83653761 None:intergenic
ATAGAGTCAAAGCATAGTAA+AGG 0.547809 7_2:+83653596 None:intergenic
TTCAAATCTCCACTCCGTTG+CGG 0.550016 7_2:+83651307 None:intergenic
GTCTGAGCAGCATTTGAGAC+AGG 0.550440 7_2:+83651898 None:intergenic
TGAATATATCACCAGCCAGT+TGG 0.552081 7_2:-83650386 Msa1083360:three_prime_UTR
CAATGCCTTCAATTCGTCGT+CGG 0.554346 7_2:-83650256 Msa1083360:three_prime_UTR
AGTTTCCATTACCATAATCA+GGG 0.555080 7_2:+83650443 None:intergenic
GGTTATCTTGAAGTCCAACT+GGG 0.555376 7_2:+83651728 None:intergenic
CGGTGTAGTTGCAAAAGTAT+GGG 0.556383 7_2:+83651447 None:intergenic
CTGCGCAATTGCATGTGGAT+CGG 0.560127 7_2:+83653308 None:intergenic
TGTTTAGGATTTCCACCTAA+GGG 0.560176 7_2:+83650848 None:intergenic
ATTCAACATCATAACTCTGT+AGG 0.560856 7_2:+83649576 None:intergenic
CCGGTGCCACCTAGGACTGT+TGG 0.561100 7_2:-83651427 Msa1083360:CDS
GGATTTGATTCTAGATATCA+GGG 0.561545 7_2:-83651808 Msa1083360:CDS
CTCTTAGCTGCTGCAACTAG+TGG 0.562484 7_2:+83652030 None:intergenic
TGGACTACTCTCTTAGCTGG+AGG 0.562680 7_2:-83651997 Msa1083360:CDS
AGGCCTTGTACATATTCAGA+AGG 0.565970 7_2:+83651097 None:intergenic
AAATGTTCAAAACGGAGGAA+GGG 0.566489 7_2:-83651830 Msa1083360:CDS
GGCGAAGATATCGGTATGGT+GGG 0.567110 7_2:-83653361 Msa1083360:CDS
GGTGCTTTAACGCTGTATGT+TGG 0.568779 7_2:-83650902 Msa1083360:CDS
ATAAATAATTCGCAGGTGCA+GGG 0.569096 7_2:+83652148 None:intergenic
AGAAACCCGAGTCAACCAAA+TGG 0.569109 7_2:-83651772 Msa1083360:CDS
CGGCGAAGATATCGGTATGG+TGG 0.569397 7_2:-83653362 Msa1083360:CDS
GTGAATGAAAGATATGTACT+TGG 0.570516 7_2:+83653711 None:intergenic
TGGTCACCAAGATAGATTGA+AGG 0.573794 7_2:+83649940 None:intergenic
ATCAGCAACAAGAAATGCAA+CGG 0.574006 7_2:+83649603 None:intergenic
GAAATCAATAAATAATTCGC+AGG 0.575414 7_2:+83652141 None:intergenic
CTTCCCTCTAATGGTAAGTG+GGG 0.577253 7_2:-83651139 Msa1083360:CDS
TCCTCATTCGCAGTTGATGG+AGG 0.578055 7_2:+83652094 None:intergenic
GGTTTGACTCGGGAAGAGTA+AGG 0.583411 7_2:+83650500 None:intergenic
GGTGCAAAAGGAGGTTGCAA+TGG 0.586116 7_2:+83651493 None:intergenic
CGCACTGTTCCGCAACGGAG+TGG 0.587754 7_2:-83651316 Msa1083360:CDS
CTCCAGAGCTTTCTTAACAT+CGG 0.590270 7_2:+83650964 None:intergenic
CAGAAGCTTAAGACACAGGA+AGG 0.591686 7_2:+83650094 None:intergenic
GATGCTTGGGATCTCCATAA+CGG 0.593120 7_2:+83650993 None:intergenic
ATTAAGATCGGAGATAAGAT+CGG 0.593203 7_2:-83653443 Msa1083360:five_prime_UTR
ACGAGTGGTGTCACCGTAGG+CGG 0.595030 7_2:+83653233 None:intergenic
TGCTCAGACACAGCAACAGG+GGG 0.595588 7_2:-83651884 Msa1083360:CDS
CAGCACGCGCTTTCTAGCAC+CGG 0.596449 7_2:-83653195 Msa1083360:CDS
GAGTTGTTGTGTATCACCAC+TGG 0.599166 7_2:+83651963 None:intergenic
AGATAAGATCAGATGGGCGG+AGG 0.599612 7_2:-83653420 Msa1083360:exon
CCTCATTCGCAGTTGATGGA+GGG 0.600072 7_2:+83652095 None:intergenic
ACTTGTATAGTTTCAGAAGA+CGG 0.600079 7_2:+83651922 None:intergenic
AAACCTTCTGAATATGTACA+AGG 0.601145 7_2:-83651100 Msa1083360:CDS
CCCAGAACAGCATGTCGACA+AGG 0.601862 7_2:+83652181 None:intergenic
TCACTTAATCATGTTCCCGC+CGG 0.605523 7_2:-83653168 Msa1083360:intron
ATGTTAAACAAACAGCTCCA+AGG 0.606915 7_2:+83649916 None:intergenic
GCTATCTGGACACAATTACA+AGG 0.607116 7_2:-83649709 Msa1083360:three_prime_UTR
GATCCCCACTTACCATTAGA+GGG 0.607911 7_2:+83651136 None:intergenic
CACTCCGTTGCGGAACAGTG+CGG 0.607972 7_2:+83651317 None:intergenic
AAGTGTGTAAATCCCTTAGG+TGG 0.612305 7_2:-83650860 Msa1083360:CDS
TGCTATGGAGCAGCAGATGG+TGG 0.612792 7_2:-83650939 Msa1083360:CDS
AAGTTTCAAATGTTGCAGGA+AGG 0.613758 7_2:-83649810 Msa1083360:three_prime_UTR
TCACCATGTTCAATATCTGA+AGG 0.616291 7_2:+83650575 None:intergenic
CTTGTTCGTATGAACTATTG+TGG 0.616869 7_2:-83653270 Msa1083360:CDS
TGAGCAGAAGCTTAAGACAC+AGG 0.619652 7_2:+83650090 None:intergenic
TCCGTTGCGGAACAGTGCGG+GGG 0.622717 7_2:+83651320 None:intergenic
TCATGGTAATGATATTGCAA+AGG 0.626813 7_2:-83649211 Msa1083360:three_prime_UTR
CCCATTGCTGTCGAGTGTGT+AGG 0.626853 7_2:+83651172 None:intergenic
CGAGTCAAACCCCGATTCAG+GGG 0.629328 7_2:-83650488 Msa1083360:CDS
CGACGGCGAAGATATCGGTA+TGG 0.634124 7_2:-83653365 Msa1083360:CDS
AGCAATAATGGTAATCAACA+AGG 0.635068 7_2:-83651604 Msa1083360:CDS
CTGCTCAGACACAGCAACAG+GGG 0.637667 7_2:-83651885 Msa1083360:CDS
TATTGCCGATCTACCAGCAG+GGG 0.638854 7_2:+83650781 None:intergenic
ATATTCTGCGCAATTGCATG+TGG 0.639515 7_2:+83653303 None:intergenic
TCGGGAAGAGTAAGGATGAG+TGG 0.640711 7_2:+83650508 None:intergenic
GAGTGCTATGGAGCAGCAGA+TGG 0.644619 7_2:-83650942 Msa1083360:CDS
TAAACAAACAGCTCCAAGGT+TGG 0.647216 7_2:+83649920 None:intergenic
AATTCAAATGTTCAAAACGG+AGG 0.648741 7_2:-83651835 Msa1083360:CDS
GCTGCTCAGACACAGCAACA+GGG 0.650440 7_2:-83651886 Msa1083360:CDS
AATGTAAACAATTATCGACC+TGG 0.651786 7_2:-83651700 Msa1083360:CDS
TCCATCAACTGCGAATGAGG+AGG 0.652227 7_2:-83652092 Msa1083360:CDS
GATCGGAGATAAGATCAGAT+GGG 0.656287 7_2:-83653426 Msa1083360:exon
ACCACTCAAGGCTATCCACA+TGG 0.657824 7_2:-83651208 Msa1083360:CDS
AGCGCGTGCTGTACAGACGC+AGG 0.658760 7_2:+83653207 None:intergenic
GTGCATAGCAGTACCACTCA+AGG 0.659605 7_2:-83651220 Msa1083360:CDS
GTATCACCACTGGTTAGTGG+AGG 0.662670 7_2:+83651973 None:intergenic
GGTTTGGATTGAGAGACTTG+AGG 0.663612 7_2:+83653806 None:intergenic
CAGAAGTCACCCCTGAATCG+GGG 0.665735 7_2:+83650479 None:intergenic
CGCGGAGGCGCAGTATACGA+CGG 0.668480 7_2:-83653382 Msa1083360:CDS
TATACGAGTGGTGTCACCGT+AGG 0.671792 7_2:+83653230 None:intergenic
CGGAGATAAGATCAGATGGG+CGG 0.673527 7_2:-83653423 Msa1083360:exon
TGTCCTTCAGATATTGAACA+TGG 0.677199 7_2:-83650578 Msa1083360:CDS
TTATTGCCGATCTACCAGCA+GGG 0.679539 7_2:+83650780 None:intergenic
GAAATCATCAAAATCAACAG+GGG 0.679631 7_2:-83651561 Msa1083360:CDS
GTTATCTTGAAGTCCAACTG+GGG 0.686988 7_2:+83651729 None:intergenic
AGGTGGAGCGACAACTAACG+CGG 0.688181 7_2:-83653400 Msa1083360:CDS
GGAGGACCTCCACTAACCAG+TGG 0.691674 7_2:-83651979 Msa1083360:CDS
AGTGAAAACTGGTAATGACA+AGG 0.692144 7_2:+83649276 None:intergenic
GGAAATCATCAAAATCAACA+GGG 0.697219 7_2:-83651562 Msa1083360:CDS
GGTTGATATTCTGGACCATG+TGG 0.700176 7_2:+83651193 None:intergenic
TTATCTTGAAGTCCAACTGG+GGG 0.703666 7_2:+83651730 None:intergenic
TACAGACGCAGGTATACGAG+TGG 0.706607 7_2:+83653218 None:intergenic
GAATTACTAGGTGCAAAAGG+AGG 0.707826 7_2:+83651484 None:intergenic
TGGAGCGACAACTAACGCGG+AGG 0.712925 7_2:-83653397 Msa1083360:CDS
TTGTTGCCAACAGTCCTAGG+TGG 0.727786 7_2:+83651421 None:intergenic
GGAAATCATCAAAATCAACA+GGG 0.731421 7_2:-83651583 Msa1083360:CDS
GCTCAGACACAGCAACAGGG+GGG 0.746430 7_2:-83651883 Msa1083360:CDS
ACCATGTGGATAGCCTTGAG+TGG 0.749894 7_2:+83651207 None:intergenic
ATCCACTGTGATGTATAACG+GGG 0.757583 7_2:+83650136 None:intergenic
TGCCCCGTTATACATCACAG+TGG 0.779311 7_2:-83650138 Msa1083360:three_prime_UTR
CAGCAACAAGAAATGCAACG+GGG 0.785002 7_2:+83649605 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATACTTATATAGATAAAATT+AGG - chr7_2:83649523-83649542 Msa1083360:three_prime_UTR 10.0%
!! GATAATTGTTTACATTATTA+CGG + chr7_2:83651319-83651338 None:intergenic 15.0%
!!! ATGAATATAGTCTATTTTAT+TGG + chr7_2:83652319-83652338 None:intergenic 15.0%
!!! ATGAATTATCCATTTTTTAT+GGG + chr7_2:83652477-83652496 None:intergenic 15.0%
!! TATCAAATATATCACTAAAA+CGG + chr7_2:83653028-83653047 None:intergenic 15.0%
!! AGCAAATGTAAATTTAAATA+CGG + chr7_2:83653602-83653621 None:intergenic 15.0%
!! ATTTAAATTTACATTTGCTT+TGG - chr7_2:83653603-83653622 Msa1083360:five_prime_UTR 15.0%
!!! TTGAATTTTTTCTCAGTATA+AGG - chr7_2:83650112-83650131 Msa1083360:three_prime_UTR 20.0%
!!! TGCGAATTATTTATTGATTT+CGG - chr7_2:83650884-83650903 Msa1083360:CDS 20.0%
!!! GATGAATTATCCATTTTTTA+TGG + chr7_2:83652478-83652497 None:intergenic 20.0%
!!! AGTATAACAAGTATCTTTTT+TGG - chr7_2:83652738-83652757 Msa1083360:intron 20.0%
!! TATGATGTTGAATAATTATC+CGG - chr7_2:83653457-83653476 Msa1083360:five_prime_UTR 20.0%
!!! ATTTTCATCTTTCTTTGTAT+TGG - chr7_2:83653655-83653674 Msa1083360:five_prime_UTR 20.0%
! AACATGATTAAGTGAAATTC+CGG + chr7_2:83649850-83649869 None:intergenic 25.0%
!! TTCATTTCTGTGATTGATTT+GGG - chr7_2:83650002-83650021 Msa1083360:three_prime_UTR 25.0%
!!! ATGGTTTTAAATTGTGATTG+CGG - chr7_2:83650151-83650170 Msa1083360:three_prime_UTR 25.0%
!!! ATTTTATTTATCACGTGATG+CGG - chr7_2:83650326-83650345 Msa1083360:three_prime_UTR 25.0%
!! GGTATTAAAAATCTGATTTG+TGG - chr7_2:83650372-83650391 Msa1083360:three_prime_UTR 25.0%
! TTATCAAAATTACACCTCAA+AGG + chr7_2:83650543-83650562 None:intergenic 25.0%
!!! GAGGTGTAATTTTGATAATT+TGG - chr7_2:83650545-83650564 Msa1083360:CDS 25.0%
!! TGTTGATTGAAAGATAGATT+TGG - chr7_2:83650620-83650639 Msa1083360:CDS 25.0%
! TGTTGAACAGTTAATACATT+TGG - chr7_2:83650683-83650702 Msa1083360:intron 25.0%
!!! AATTTCACACTATTGATTTG+TGG + chr7_2:83650742-83650761 None:intergenic 25.0%
!!! GTGTGAAATTTTGATACATT+TGG - chr7_2:83650752-83650771 Msa1083360:intron 25.0%
!!! CTTTTTTCATGTTTGGTTAT+AGG - chr7_2:83650792-83650811 Msa1083360:CDS 25.0%
! GAAATCAATAAATAATTCGC+AGG + chr7_2:83650885-83650904 None:intergenic 25.0%
!!! GCGAATTATTTATTGATTTC+GGG - chr7_2:83650885-83650904 Msa1083360:CDS 25.0%
! GGAAATTCAAATGTTCAAAA+CGG - chr7_2:83651185-83651204 Msa1083360:CDS 25.0%
! TTTGGAGAATATGAATTACT+AGG + chr7_2:83651554-83651573 None:intergenic 25.0%
! AATAATAAACTTCCCTCTAA+TGG - chr7_2:83651875-83651894 Msa1083360:CDS 25.0%
! ATGGTGGTAAAACAAAATTT+AGG - chr7_2:83652100-83652119 Msa1083360:CDS 25.0%
!!! TGAATCTATTCTATTTCTGT+AGG - chr7_2:83652366-83652385 Msa1083360:intron 25.0%
!!! TGTTTTAAAGATCTTGCTTT+GGG - chr7_2:83652419-83652438 Msa1083360:intron 25.0%
!!! TTACTTTTATGAGTTTTCTC+TGG + chr7_2:83652616-83652635 None:intergenic 25.0%
! AGAATCATTCGAATAATTAC+TGG + chr7_2:83652664-83652683 None:intergenic 25.0%
!! TGTAGTATTTGGTATTTTTC+GGG + chr7_2:83652836-83652855 None:intergenic 25.0%
!! CTGTAGTATTTGGTATTTTT+CGG + chr7_2:83652837-83652856 None:intergenic 25.0%
! AAATACCAAATACTACAGTT+TGG - chr7_2:83652839-83652858 Msa1083360:intron 25.0%
!! CTACAAATATACATTTTGCT+CGG - chr7_2:83652968-83652987 Msa1083360:intron 25.0%
!! TACAAATATACATTTTGCTC+GGG - chr7_2:83652969-83652988 Msa1083360:intron 25.0%
! ATATTTCCTTCAATCTATCT+TGG - chr7_2:83653077-83653096 Msa1083360:intron 25.0%
! ACAAGGTATGTTTATTATGA+TGG - chr7_2:83653331-83653350 Msa1083360:CDS 25.0%
!! GTTTTCAACATGATTCAAAA+TGG - chr7_2:83653383-83653402 Msa1083360:CDS 25.0%
! CTAAATTCTTCATTGTATCA+TGG - chr7_2:83653795-83653814 Msa1083360:five_prime_UTR 25.0%
GTGAATGAAAGATATGTACT+TGG + chr7_2:83649315-83649334 None:intergenic 30.0%
! GGTTTTTATGGCTATCATTT+TGG + chr7_2:83649337-83649356 None:intergenic 30.0%
!! TACACAAGATTCGGTTTTTA+TGG + chr7_2:83649349-83649368 None:intergenic 30.0%
ATAGAGTCAAAGCATAGTAA+AGG + chr7_2:83649430-83649449 None:intergenic 30.0%
! TTAGTTTGAATCGATCTTTG+TGG - chr7_2:83649556-83649575 Msa1083360:three_prime_UTR 30.0%
GATCTTTGTGGAATTAAGAT+CGG - chr7_2:83649568-83649587 Msa1083360:three_prime_UTR 30.0%
ATTAAGATCGGAGATAAGAT+CGG - chr7_2:83649580-83649599 Msa1083360:three_prime_UTR 30.0%
AGCTATGATTTATGAACTGT+CGG - chr7_2:83649923-83649942 Msa1083360:three_prime_UTR 30.0%
GTTCATTTCTGTGATTGATT+TGG - chr7_2:83650001-83650020 Msa1083360:three_prime_UTR 30.0%
!!! ATTGATTTGGGTATTTTACG+CGG - chr7_2:83650014-83650033 Msa1083360:three_prime_UTR 30.0%
ACTTGTATAGTTTCAGAAGA+CGG + chr7_2:83651104-83651123 None:intergenic 30.0%
AATTCAAATGTTCAAAACGG+AGG - chr7_2:83651188-83651207 Msa1083360:CDS 30.0%
GGATTTGATTCTAGATATCA+GGG - chr7_2:83651215-83651234 Msa1083360:CDS 30.0%
AATGTAAACAATTATCGACC+TGG - chr7_2:83651323-83651342 Msa1083360:CDS 30.0%
TTACCATTATTGCTCCATAA+TGG + chr7_2:83651413-83651432 None:intergenic 30.0%
AGCAATAATGGTAATCAACA+AGG - chr7_2:83651419-83651438 Msa1083360:CDS 30.0%
AGGAAATCATCAAAATCAAC+AGG - chr7_2:83651439-83651458 Msa1083360:CDS 30.0%
GGAAATCATCAAAATCAACA+GGG - chr7_2:83651440-83651459 Msa1083360:CDS 30.0%
GGAAATCATCAAAATCAACA+GGG - chr7_2:83651440-83651459 Msa1083360:CDS 30.0%
GAAATCATCAAAATCAACAG+GGG - chr7_2:83651441-83651460 Msa1083360:CDS 30.0%
TATGAATTACTAGGTGCAAA+AGG + chr7_2:83651545-83651564 None:intergenic 30.0%
ATATCTGGTTATCCCAATAA+TGG - chr7_2:83651674-83651693 Msa1083360:CDS 30.0%
AGATCAACGAATGAACAAAA+TGG - chr7_2:83651773-83651792 Msa1083360:CDS 30.0%
GAATGAACAAAATGGACATA+TGG - chr7_2:83651781-83651800 Msa1083360:CDS 30.0%
TGTACATATTCAGAAGGTTT+AGG + chr7_2:83651923-83651942 None:intergenic 30.0%
AAACCTTCTGAATATGTACA+AGG - chr7_2:83651923-83651942 Msa1083360:CDS 30.0%
CAAGTAAAACAACACCTATA+AGG + chr7_2:83651949-83651968 None:intergenic 30.0%
TCAGTTATATTCTTCTCAGT+TGG + chr7_2:83652004-83652023 None:intergenic 30.0%
AATTTCGTCCCAAATTTCTT+TGG + chr7_2:83652206-83652225 None:intergenic 30.0%
AGAATAGATTCATCAGAATG+CGG + chr7_2:83652358-83652377 None:intergenic 30.0%
!!! GTGTTTTAAAGATCTTGCTT+TGG - chr7_2:83652418-83652437 Msa1083360:intron 30.0%
TGGTGATAACCCATAAAAAA+TGG - chr7_2:83652465-83652484 Msa1083360:intron 30.0%
AGTTTCCATTACCATAATCA+GGG + chr7_2:83652583-83652602 None:intergenic 30.0%
AAGTTTCCATTACCATAATC+AGG + chr7_2:83652584-83652603 None:intergenic 30.0%
!! TATGGTAATGGAAACTTGAA+AGG - chr7_2:83652587-83652606 Msa1083360:intron 30.0%
TCTCGTATGAATCAAACTAT+AGG - chr7_2:83652690-83652709 Msa1083360:intron 30.0%
CGAGCAAAATGTATATTTGT+AGG + chr7_2:83652970-83652989 None:intergenic 30.0%
! ACAAATATACATTTTGCTCG+GGG - chr7_2:83652970-83652989 Msa1083360:intron 30.0%
TTTCAGGGTGTATTGTAAAA+TGG - chr7_2:83653154-83653173 Msa1083360:intron 30.0%
CACTTAAAATTGCACAAGAT+TGG - chr7_2:83653255-83653274 Msa1083360:CDS 30.0%
!! CAAACTCTTAATTTGCTATC+TGG - chr7_2:83653300-83653319 Msa1083360:CDS 30.0%
ATTCAACATCATAACTCTGT+AGG + chr7_2:83653450-83653469 None:intergenic 30.0%
! TTTTTAGATGTACTCAGAAC+TGG - chr7_2:83653685-83653704 Msa1083360:five_prime_UTR 30.0%
! TAGCGATCAATTTGTTTGAT+CGG - chr7_2:83653710-83653729 Msa1083360:five_prime_UTR 30.0%
CAACAAATACAAGTGAAAAC+TGG + chr7_2:83653761-83653780 None:intergenic 30.0%
! TCATGGTAATGATATTGCAA+AGG - chr7_2:83653812-83653831 Msa1083360:five_prime_UTR 30.0%
TTTCTTCTTGCGTATTGCAT+GGG + chr7_2:83649241-83649260 None:intergenic 35.0%
! TTTTCTTCTTGCGTATTGCA+TGG + chr7_2:83649242-83649261 None:intergenic 35.0%
ATACGACAGCAATTGGAAAA+AGG - chr7_2:83649275-83649294 Msa1083360:three_prime_UTR 35.0%
TACGACAGCAATTGGAAAAA+GGG - chr7_2:83649276-83649295 Msa1083360:three_prime_UTR 35.0%
TGAAGAGACTACACAAGATT+CGG + chr7_2:83649358-83649377 None:intergenic 35.0%
!!! AGAGATTGAGGGTTTTGTTT+TGG + chr7_2:83649404-83649423 None:intergenic 35.0%
AGTAAAGGTGAAGAGATTGA+GGG + chr7_2:83649415-83649434 None:intergenic 35.0%
TAGTAAAGGTGAAGAGATTG+AGG + chr7_2:83649416-83649435 None:intergenic 35.0%
GAAAACTGTCATGTTCCTAA+AGG - chr7_2:83649690-83649709 Msa1083360:three_prime_UTR 35.0%
CTTGTTCGTATGAACTATTG+TGG - chr7_2:83649753-83649772 Msa1083360:three_prime_UTR 35.0%
AATCGAAGTAAGTTCGTTAC+CGG + chr7_2:83649877-83649896 None:intergenic 35.0%
!! AGGTGATTTGATTTGAAGCA+TGG - chr7_2:83650132-83650151 Msa1083360:three_prime_UTR 35.0%
TATTGTGATAGCTGATACTG+TGG - chr7_2:83650194-83650213 Msa1083360:three_prime_UTR 35.0%
ATTATAGCCCTGACTTATTG+CGG - chr7_2:83650270-83650289 Msa1083360:three_prime_UTR 35.0%
TGTGTATTGCTGTAATTTCG+TGG - chr7_2:83650302-83650321 Msa1083360:three_prime_UTR 35.0%
GTGTATTGCTGTAATTTCGT+GGG - chr7_2:83650303-83650322 Msa1083360:three_prime_UTR 35.0%
TGGTTCACTTGAAACATTCA+CGG - chr7_2:83650640-83650659 Msa1083360:intron 35.0%
!! AAACATTCACGGTTGATTTG+TGG - chr7_2:83650651-83650670 Msa1083360:intron 35.0%
!!! GCTGAAGCTTTTTTCATGTT+TGG - chr7_2:83650785-83650804 Msa1083360:CDS 35.0%
ATAAATAATTCGCAGGTGCA+GGG + chr7_2:83650878-83650897 None:intergenic 35.0%
AATAAATAATTCGCAGGTGC+AGG + chr7_2:83650879-83650898 None:intergenic 35.0%
CCAGCATGAATTTCAGAATA+GGG + chr7_2:83651167-83651186 None:intergenic 35.0%
TCCAGCATGAATTTCAGAAT+AGG + chr7_2:83651168-83651187 None:intergenic 35.0%
AAATGTTCAAAACGGAGGAA+GGG - chr7_2:83651193-83651212 Msa1083360:CDS 35.0%
GGGATTTGATTCTAGATATC+AGG - chr7_2:83651214-83651233 Msa1083360:CDS 35.0%
ACATTTGGATTATAGTTGCC+AGG + chr7_2:83651344-83651363 None:intergenic 35.0%
AATCCAAATGTTCCTCAAAG+TGG - chr7_2:83651353-83651372 Msa1083360:CDS 35.0%
GATCCATTATGGAGCAATAA+TGG - chr7_2:83651407-83651426 Msa1083360:CDS 35.0%
GGGAAATCATCAAAATCAAC+AGG - chr7_2:83651460-83651479 Msa1083360:CDS 35.0%
! GTTGCAAAAGTATGGGAATT+TGG + chr7_2:83651572-83651591 None:intergenic 35.0%
ATGTTCAGATTGCCAATATC+TGG + chr7_2:83651656-83651675 None:intergenic 35.0%
ATTGGCAATCTGAACATATC+TGG - chr7_2:83651659-83651678 Msa1083360:CDS 35.0%
TGTTCATTCGTTGATCTTAC+CGG + chr7_2:83651770-83651789 None:intergenic 35.0%
! GAATATGTACAAGGCCTTAT+AGG - chr7_2:83651932-83651951 Msa1083360:CDS 35.0%
!!! GGCATTTTTTAGTGAGTTCA+GGG + chr7_2:83651972-83651991 None:intergenic 35.0%
!!! TGGCATTTTTTAGTGAGTTC+AGG + chr7_2:83651973-83651992 None:intergenic 35.0%
ATAACTGATAGCATCCGTTA+TGG - chr7_2:83652016-83652035 Msa1083360:CDS 35.0%
TTGGTAAGAATGACAAACTC+TGG - chr7_2:83652140-83652159 Msa1083360:CDS 35.0%
! TGTTTAGGATTTCCACCTAA+GGG + chr7_2:83652178-83652197 None:intergenic 35.0%
!! ATTTCTTTGGAGTGCTGTTT+AGG + chr7_2:83652193-83652212 None:intergenic 35.0%
AACAGCACTCCAAAGAAATT+TGG - chr7_2:83652194-83652213 Msa1083360:CDS 35.0%
ACAGCACTCCAAAGAAATTT+GGG - chr7_2:83652195-83652214 Msa1083360:CDS 35.0%
AATAGATTCATCAGAATGCG+GGG + chr7_2:83652356-83652375 None:intergenic 35.0%
GAATAGATTCATCAGAATGC+GGG + chr7_2:83652357-83652376 None:intergenic 35.0%
! TATTTCTGTAGGTATGAAGC+AGG - chr7_2:83652377-83652396 Msa1083360:intron 35.0%
TGTCCTTCAGATATTGAACA+TGG - chr7_2:83652445-83652464 Msa1083360:intron 35.0%
TCACCATGTTCAATATCTGA+AGG + chr7_2:83652451-83652470 None:intergenic 35.0%
CCATACCAAACTGTAGTATT+TGG + chr7_2:83652847-83652866 None:intergenic 35.0%
CCAAATACTACAGTTTGGTA+TGG - chr7_2:83652844-83652863 Msa1083360:intron 35.0%
AGATCCACTGTGATGTATAA+CGG + chr7_2:83652892-83652911 None:intergenic 35.0%
AGGAAATATCTCGACACATT+TGG + chr7_2:83653066-83653085 None:intergenic 35.0%
ATGTTAAACAAACAGCTCCA+AGG + chr7_2:83653110-83653129 None:intergenic 35.0%
! TCTACCAAGTCAGATTTTTC+AGG - chr7_2:83653138-83653157 Msa1083360:intron 35.0%
! CTACCAAGTCAGATTTTTCA+GGG - chr7_2:83653139-83653158 Msa1083360:intron 35.0%
AGCGTCAAATGAACAAATTC+TGG + chr7_2:83653184-83653203 None:intergenic 35.0%
TTCGAAGTTTCAAATGTTGC+AGG - chr7_2:83653209-83653228 Msa1083360:CDS 35.0%
AAGTTTCAAATGTTGCAGGA+AGG - chr7_2:83653213-83653232 Msa1083360:CDS 35.0%
ATCAGCAACAAGAAATGCAA+CGG + chr7_2:83653423-83653442 None:intergenic 35.0%
! TTATCCGGAAATACAGCTTT+TGG - chr7_2:83653472-83653491 Msa1083360:five_prime_UTR 35.0%
ACATCCAAAAGCTGTATTTC+CGG + chr7_2:83653479-83653498 None:intergenic 35.0%
! AAATACAGCTTTTGGATGTC+TGG - chr7_2:83653480-83653499 Msa1083360:five_prime_UTR 35.0%
!! CTGGCTCTATATACTGAATT+TGG - chr7_2:83653499-83653518 Msa1083360:five_prime_UTR 35.0%
! AGTGAAAACTGGTAATGACA+AGG + chr7_2:83653750-83653769 None:intergenic 35.0%
CAATTGCTGTCGTATGCAAT+GGG + chr7_2:83649270-83649289 None:intergenic 40.0%
AGATCGGAGATAAGATCAGA+TGG - chr7_2:83649596-83649615 Msa1083360:three_prime_UTR 40.0%
GATCGGAGATAAGATCAGAT+GGG - chr7_2:83649597-83649616 Msa1083360:three_prime_UTR 40.0%
ATATTCTGCGCAATTGCATG+TGG + chr7_2:83649723-83649742 None:intergenic 40.0%
CGCAGTTTGTACTGTCTATA+TGG - chr7_2:83650351-83650370 Msa1083360:three_prime_UTR 40.0%
!! CCCTATTCTGAAATTCATGC+TGG - chr7_2:83651164-83651183 Msa1083360:CDS 40.0%
CAAATGTTCAAAACGGAGGA+AGG - chr7_2:83651192-83651211 Msa1083360:CDS 40.0%
AATGTTCAAAACGGAGGAAG+GGG - chr7_2:83651194-83651213 Msa1083360:CDS 40.0%
TTATCTTGAAGTCCAACTGG+GGG + chr7_2:83651296-83651315 None:intergenic 40.0%
GTTATCTTGAAGTCCAACTG+GGG + chr7_2:83651297-83651316 None:intergenic 40.0%
GGTTATCTTGAAGTCCAACT+GGG + chr7_2:83651298-83651317 None:intergenic 40.0%
! GATCCACTTTGAGGAACATT+TGG + chr7_2:83651359-83651378 None:intergenic 40.0%
TTTGTGGTTGATCCACTTTG+AGG + chr7_2:83651368-83651387 None:intergenic 40.0%
!! GCTCCATAATGGATCAGAAT+TGG + chr7_2:83651402-83651421 None:intergenic 40.0%
!! GGAAAACCGTTTGGTCTTAA+TGG + chr7_2:83651512-83651531 None:intergenic 40.0%
GAATTACTAGGTGCAAAAGG+AGG + chr7_2:83651542-83651561 None:intergenic 40.0%
! CGGTGTAGTTGCAAAAGTAT+GGG + chr7_2:83651579-83651598 None:intergenic 40.0%
! CCATACTTTTGCAACTACAC+CGG - chr7_2:83651577-83651596 Msa1083360:CDS 40.0%
AAATTGTTGCCAACAGTCCT+AGG + chr7_2:83651608-83651627 None:intergenic 40.0%
GTTGGCAACAATTTCAGTAC+AGG - chr7_2:83651614-83651633 Msa1083360:CDS 40.0%
!! GAGTGTGTAGGTTGATATTC+TGG + chr7_2:83651842-83651861 None:intergenic 40.0%
AACTTCCCTCTAATGGTAAG+TGG - chr7_2:83651882-83651901 Msa1083360:CDS 40.0%
ACTTCCCTCTAATGGTAAGT+GGG - chr7_2:83651883-83651902 Msa1083360:CDS 40.0%
! AGGCCTTGTACATATTCAGA+AGG + chr7_2:83651929-83651948 None:intergenic 40.0%
CTCCAGAGCTTTCTTAACAT+CGG + chr7_2:83652062-83652081 None:intergenic 40.0%
! TGGAAGTGTGTAAATCCCTT+AGG - chr7_2:83652160-83652179 Msa1083360:CDS 40.0%
AAGTGTGTAAATCCCTTAGG+TGG - chr7_2:83652163-83652182 Msa1083360:CDS 40.0%
! CTGTTTAGGATTTCCACCTA+AGG + chr7_2:83652179-83652198 None:intergenic 40.0%
! AATTTTCTAACAACCCCTGC+TGG - chr7_2:83652229-83652248 Msa1083360:intron 40.0%
! AGAATGCGGGGATATCTTTT+AGG + chr7_2:83652344-83652363 None:intergenic 40.0%
TGGATAATTCATCAGCAGTC+TGG - chr7_2:83652485-83652504 Msa1083360:intron 40.0%
TGAATATATCACCAGCCAGT+TGG - chr7_2:83652637-83652656 Msa1083360:intron 40.0%
CGAATAATTACTGGTCCAAC+TGG + chr7_2:83652655-83652674 None:intergenic 40.0%
AATTCGTCGTCGGAGATAAA+TGG - chr7_2:83652777-83652796 Msa1083360:intron 40.0%
ATCCACTGTGATGTATAACG+GGG + chr7_2:83652890-83652909 None:intergenic 40.0%
GATCCACTGTGATGTATAAC+GGG + chr7_2:83652891-83652910 None:intergenic 40.0%
ACATCACAGTGGATCTATCT+TGG - chr7_2:83652896-83652915 Msa1083360:intron 40.0%
GGAGTTCTTCCTTATTAGAC+TGG - chr7_2:83652991-83653010 Msa1083360:intron 40.0%
CCAAGTAGTCCAGTCTAATA+AGG + chr7_2:83653003-83653022 None:intergenic 40.0%
CCTTATTAGACTGGACTACT+TGG - chr7_2:83653000-83653019 Msa1083360:intron 40.0%
TGGTCACCAAGATAGATTGA+AGG + chr7_2:83653086-83653105 None:intergenic 40.0%
TAAACAAACAGCTCCAAGGT+TGG + chr7_2:83653106-83653125 None:intergenic 40.0%
ACACCCTGAAAAATCTGACT+TGG + chr7_2:83653145-83653164 None:intergenic 40.0%
GCTATCTGGACACAATTACA+AGG - chr7_2:83653314-83653333 Msa1083360:CDS 40.0%
TCAGCAACAAGAAATGCAAC+GGG + chr7_2:83653422-83653441 None:intergenic 40.0%
GTTGCATTTCTTGTTGCTGA+TGG - chr7_2:83653422-83653441 Msa1083360:exon 40.0%
! TTGGTGATTTAGTCGCGAAT+TGG - chr7_2:83653518-83653537 Msa1083360:five_prime_UTR 40.0%
CTATTGCCTCTTAATGTCAG+TGG - chr7_2:83653560-83653579 Msa1083360:five_prime_UTR 40.0%
TTGAGGTGGAGAGTAGTGTT+TGG + chr7_2:83649203-83649222 None:intergenic 45.0%
TTGGATTGAGAGACTTGAGG+TGG + chr7_2:83649217-83649236 None:intergenic 45.0%
GGTTTGGATTGAGAGACTTG+AGG + chr7_2:83649220-83649239 None:intergenic 45.0%
TCTTGCGTATTGCATGGGTT+TGG + chr7_2:83649236-83649255 None:intergenic 45.0%
CCAATTGCTGTCGTATGCAA+TGG + chr7_2:83649271-83649290 None:intergenic 45.0%
CCATTGCATACGACAGCAAT+TGG - chr7_2:83649268-83649287 Msa1083360:three_prime_UTR 45.0%
GTATACGACGGCGAAGATAT+CGG - chr7_2:83649653-83649672 Msa1083360:three_prime_UTR 45.0%
TCACTTAATCATGTTCCCGC+CGG - chr7_2:83649855-83649874 Msa1083360:three_prime_UTR 45.0%
TTTGACGAGAATCAGCAACG+TGG - chr7_2:83650057-83650076 Msa1083360:three_prime_UTR 45.0%
!! GATTGCGGTAGAAGTTGATG+TGG - chr7_2:83650166-83650185 Msa1083360:three_prime_UTR 45.0%
GCAAACACCGCAATAAGTCA+GGG + chr7_2:83650280-83650299 None:intergenic 45.0%
CTTGTTTGCTTCCTTTCTCG+AGG - chr7_2:83650415-83650434 Msa1083360:three_prime_UTR 45.0%
ACATCTCAAAGCCTCGAGAA+AGG + chr7_2:83650429-83650448 None:intergenic 45.0%
CTTCCTTTCTTGAGCCTTTG+AGG - chr7_2:83650526-83650545 Msa1083360:CDS 45.0%
ACACCTCAAAGGCTCAAGAA+AGG + chr7_2:83650532-83650551 None:intergenic 45.0%
!! AGTGGTGCAGATGCTTTTTG+AGG + chr7_2:83650978-83650997 None:intergenic 45.0%
! TTGCAGCAGCTAAGAGTGTA+TGG - chr7_2:83651000-83651019 Msa1083360:CDS 45.0%
! CAGCTAAGAGTGTATGGCTT+TGG - chr7_2:83651006-83651025 Msa1083360:CDS 45.0%
CTTTGGACTACTCTCTTAGC+TGG - chr7_2:83651023-83651042 Msa1083360:CDS 45.0%
! TGTGTATCACCACTGGTTAG+TGG + chr7_2:83651056-83651075 None:intergenic 45.0%
GAGTTGTTGTGTATCACCAC+TGG + chr7_2:83651063-83651082 None:intergenic 45.0%
GATATCAGGGTAGACCAACT+TGG - chr7_2:83651228-83651247 Msa1083360:CDS 45.0%
AGAAACCCGAGTCAACCAAA+TGG - chr7_2:83651251-83651270 Msa1083360:CDS 45.0%
TTCGGTCCATTTGGTTGACT+CGG + chr7_2:83651260-83651279 None:intergenic 45.0%
TTCATGGCTTTCGGTCCATT+TGG + chr7_2:83651269-83651288 None:intergenic 45.0%
CGGTTATCTTGAAGTCCAAC+TGG + chr7_2:83651299-83651318 None:intergenic 45.0%
GCGCCAATTCTGATCCATTA+TGG - chr7_2:83651396-83651415 Msa1083360:CDS 45.0%
GGTCTTAATGGCTGGGAATA+TGG + chr7_2:83651500-83651519 None:intergenic 45.0%
TCCCAGCCATTAAGACCAAA+CGG - chr7_2:83651503-83651522 Msa1083360:CDS 45.0%
!! ACCGTTTGGTCTTAATGGCT+GGG + chr7_2:83651507-83651526 None:intergenic 45.0%
!! AACCGTTTGGTCTTAATGGC+TGG + chr7_2:83651508-83651527 None:intergenic 45.0%
GGTTGCAATGGAAAACCGTT+TGG + chr7_2:83651521-83651540 None:intergenic 45.0%
CCGGTGTAGTTGCAAAAGTA+TGG + chr7_2:83651580-83651599 None:intergenic 45.0%
CCAATATCTGGCACAGTTCT+AGG + chr7_2:83651644-83651663 None:intergenic 45.0%
CCTAGAACTGTGCCAGATAT+TGG - chr7_2:83651641-83651660 Msa1083360:CDS 45.0%
CGGGGGTTATGACCATTATT+GGG + chr7_2:83651689-83651708 None:intergenic 45.0%
TTCAAATCTCCACTCCGTTG+CGG + chr7_2:83651719-83651738 None:intergenic 45.0%
! GGAGCACTACTCTTAGGATT+CGG + chr7_2:83651743-83651762 None:intergenic 45.0%
TAAGAGTAGTGCTCCACTTC+CGG - chr7_2:83651748-83651767 Msa1083360:CDS 45.0%
TTCGTTGATCTTACCGGAAG+TGG + chr7_2:83651764-83651783 None:intergenic 45.0%
! GGTTGATATTCTGGACCATG+TGG + chr7_2:83651833-83651852 None:intergenic 45.0%
CTTCCCTCTAATGGTAAGTG+GGG - chr7_2:83651884-83651903 Msa1083360:CDS 45.0%
GATCCCCACTTACCATTAGA+GGG + chr7_2:83651890-83651909 None:intergenic 45.0%
AGATCCCCACTTACCATTAG+AGG + chr7_2:83651891-83651910 None:intergenic 45.0%
AATGGTAAGTGGGGATCTTC+AGG - chr7_2:83651893-83651912 Msa1083360:CDS 45.0%
CTTCTCAGTTGGCATCATCT+TGG + chr7_2:83651993-83652012 None:intergenic 45.0%
GATGCTTGGGATCTCCATAA+CGG + chr7_2:83652033-83652052 None:intergenic 45.0%
CACCGATGTTAAGAAAGCTC+TGG - chr7_2:83652057-83652076 Msa1083360:CDS 45.0%
GGTGCTTTAACGCTGTATGT+TGG - chr7_2:83652121-83652140 Msa1083360:CDS 45.0%
TTATTGCCGATCTACCAGCA+GGG + chr7_2:83652246-83652265 None:intergenic 45.0%
ATTATTGCCGATCTACCAGC+AGG + chr7_2:83652247-83652266 None:intergenic 45.0%
TGCTGGTAGATCGGCAATAA+TGG - chr7_2:83652246-83652265 Msa1083360:intron 45.0%
TAATTCATCAGCAGTCTGGC+TGG - chr7_2:83652489-83652508 Msa1083360:intron 45.0%
CAGCACCCTGATTATGGTAA+TGG - chr7_2:83652575-83652594 Msa1083360:intron 45.0%
TAATTACTGGTCCAACTGGC+TGG + chr7_2:83652651-83652670 None:intergenic 45.0%
CAATGCCTTCAATTCGTCGT+CGG - chr7_2:83652767-83652786 Msa1083360:intron 45.0%
TATCTCCGACGACGAATTGA+AGG + chr7_2:83652775-83652794 None:intergenic 45.0%
ACAGTTTGGTATGGTTGCTG+AGG - chr7_2:83652853-83652872 Msa1083360:intron 45.0%
CAGAAGCTTAAGACACAGGA+AGG + chr7_2:83652932-83652951 None:intergenic 45.0%
TGAGCAGAAGCTTAAGACAC+AGG + chr7_2:83652936-83652955 None:intergenic 45.0%
! TCTATCTTGGTGACCAACCT+TGG - chr7_2:83653090-83653109 Msa1083360:intron 45.0%
CAGCAACAAGAAATGCAACG+GGG + chr7_2:83653421-83653440 None:intergenic 45.0%
! TTTAGTCGCGAATTGGTCTC+TGG - chr7_2:83653525-83653544 Msa1083360:five_prime_UTR 45.0%
CAGCTACCACTGACATTAAG+AGG + chr7_2:83653569-83653588 None:intergenic 45.0%
TGCTGTCGTATGCAATGGGT+CGG + chr7_2:83649266-83649285 None:intergenic 50.0%
CGGAGATAAGATCAGATGGG+CGG - chr7_2:83649600-83649619 Msa1083360:three_prime_UTR 50.0%
AGATAAGATCAGATGGGCGG+AGG - chr7_2:83649603-83649622 Msa1083360:three_prime_UTR 50.0%
GGCGAAGATATCGGTATGGT+GGG - chr7_2:83649662-83649681 Msa1083360:three_prime_UTR 50.0%
CTGCGCAATTGCATGTGGAT+CGG + chr7_2:83649718-83649737 None:intergenic 50.0%
!! TATACGAGTGGTGTCACCGT+AGG + chr7_2:83649796-83649815 None:intergenic 50.0%
TACAGACGCAGGTATACGAG+TGG + chr7_2:83649808-83649827 None:intergenic 50.0%
GAAGTAAGTTCGTTACCGGC+GGG + chr7_2:83649873-83649892 None:intergenic 50.0%
CGAAGTAAGTTCGTTACCGG+CGG + chr7_2:83649874-83649893 None:intergenic 50.0%
! TGTGTGTTGCTGTGATTGCG+CGG - chr7_2:83650226-83650245 Msa1083360:three_prime_UTR 50.0%
CGCAAACACCGCAATAAGTC+AGG + chr7_2:83650281-83650300 None:intergenic 50.0%
TCCTTGTCGACATGCTGTTC+TGG - chr7_2:83650841-83650860 Msa1083360:CDS 50.0%
CCTTGTCGACATGCTGTTCT+GGG - chr7_2:83650842-83650861 Msa1083360:CDS 50.0%
!! CCTCATTCGCAGTTGATGGA+GGG + chr7_2:83650931-83650950 None:intergenic 50.0%
!! TCCTCATTCGCAGTTGATGG+AGG + chr7_2:83650932-83650951 None:intergenic 50.0%
TCCATCAACTGCGAATGAGG+AGG - chr7_2:83650931-83650950 Msa1083360:CDS 50.0%
ACCTCCTCATTCGCAGTTGA+TGG + chr7_2:83650935-83650954 None:intergenic 50.0%
CTCTTAGCTGCTGCAACTAG+TGG + chr7_2:83650996-83651015 None:intergenic 50.0%
TGGACTACTCTCTTAGCTGG+AGG - chr7_2:83651026-83651045 Msa1083360:CDS 50.0%
! GTATCACCACTGGTTAGTGG+AGG + chr7_2:83651053-83651072 None:intergenic 50.0%
! GTCTGAGCAGCATTTGAGAC+AGG + chr7_2:83651128-83651147 None:intergenic 50.0%
! TGACTCGGGTTTCTCCAAGT+TGG + chr7_2:83651245-83651264 None:intergenic 50.0%
! TCGGTCCATTTGGTTGACTC+GGG + chr7_2:83651259-83651278 None:intergenic 50.0%
ATTGGCGCGCTCAAAGTTTG+TGG + chr7_2:83651384-83651403 None:intergenic 50.0%
GGTGCAAAAGGAGGTTGCAA+TGG + chr7_2:83651533-83651552 None:intergenic 50.0%
TTGTTGCCAACAGTCCTAGG+TGG + chr7_2:83651605-83651624 None:intergenic 50.0%
GCGGGGGTTATGACCATTAT+TGG + chr7_2:83651690-83651709 None:intergenic 50.0%
! GGAAGTGGAGCACTACTCTT+AGG + chr7_2:83651749-83651768 None:intergenic 50.0%
GTGCATAGCAGTACCACTCA+AGG - chr7_2:83651803-83651822 Msa1083360:CDS 50.0%
ACCACTCAAGGCTATCCACA+TGG - chr7_2:83651815-83651834 Msa1083360:CDS 50.0%
! ACCATGTGGATAGCCTTGAG+TGG + chr7_2:83651819-83651838 None:intergenic 50.0%
ACCTACACACTCGACAGCAA+TGG - chr7_2:83651850-83651869 Msa1083360:CDS 50.0%
CCTACACACTCGACAGCAAT+GGG - chr7_2:83651851-83651870 Msa1083360:CDS 50.0%
!! ACATCGGTGTTGCGATGCTT+GGG + chr7_2:83652046-83652065 None:intergenic 50.0%
!! AACATCGGTGTTGCGATGCT+TGG + chr7_2:83652047-83652066 None:intergenic 50.0%
!! GAAAGCTCTGGAGAGTGCTA+TGG - chr7_2:83652069-83652088 Msa1083360:CDS 50.0%
AACAACCCCTGCTGGTAGAT+CGG - chr7_2:83652237-83652256 Msa1083360:intron 50.0%
TATTGCCGATCTACCAGCAG+GGG + chr7_2:83652245-83652264 None:intergenic 50.0%
TCGGGAAGAGTAAGGATGAG+TGG + chr7_2:83652518-83652537 None:intergenic 50.0%
!! GGTTTGACTCGGGAAGAGTA+AGG + chr7_2:83652526-83652545 None:intergenic 50.0%
TCAGAAGTCACCCCTGAATC+GGG + chr7_2:83652548-83652567 None:intergenic 50.0%
GTCAGAAGTCACCCCTGAAT+CGG + chr7_2:83652549-83652568 None:intergenic 50.0%
GCATAGCAGCACCCTGATTA+TGG - chr7_2:83652569-83652588 Msa1083360:intron 50.0%
TGCCCCGTTATACATCACAG+TGG - chr7_2:83652885-83652904 Msa1083360:intron 50.0%
GCTGTCGTATGCAATGGGTC+GGG + chr7_2:83649265-83649284 None:intergenic 55.0%
TAAGATCAGATGGGCGGAGG+TGG - chr7_2:83649606-83649625 Msa1083360:three_prime_UTR 55.0%
AGGTGGAGCGACAACTAACG+CGG - chr7_2:83649623-83649642 Msa1083360:three_prime_UTR 55.0%
CGACGGCGAAGATATCGGTA+TGG - chr7_2:83649658-83649677 Msa1083360:three_prime_UTR 55.0%
CGGCGAAGATATCGGTATGG+TGG - chr7_2:83649661-83649680 Msa1083360:three_prime_UTR 55.0%
GCATGTGGATCGGAGCCTTT+AGG + chr7_2:83649708-83649727 None:intergenic 55.0%
ACCGTAGGCGGAGATGGAAA+CGG + chr7_2:83649781-83649800 None:intergenic 55.0%
! GTGTGTTGCTGTGATTGCGC+GGG - chr7_2:83650227-83650246 Msa1083360:three_prime_UTR 55.0%
CCCAGAACAGCATGTCGACA+AGG + chr7_2:83650845-83650864 None:intergenic 55.0%
CCCTCCATCAACTGCGAATG+AGG - chr7_2:83650928-83650947 Msa1083360:CDS 55.0%
TGCTGCTCAGACACAGCAAC+AGG - chr7_2:83651136-83651155 Msa1083360:CDS 55.0%
GCTGCTCAGACACAGCAACA+GGG - chr7_2:83651137-83651156 Msa1083360:CDS 55.0%
CTGCTCAGACACAGCAACAG+GGG - chr7_2:83651138-83651157 Msa1083360:CDS 55.0%
TGCTCAGACACAGCAACAGG+GGG - chr7_2:83651139-83651158 Msa1083360:CDS 55.0%
! GGGGGTGGATTCATGGCTTT+CGG + chr7_2:83651278-83651297 None:intergenic 55.0%
! TCCAACTGGGGGTGGATTCA+TGG + chr7_2:83651285-83651304 None:intergenic 55.0%
TCTTGAAGTCCAACTGGGGG+TGG + chr7_2:83651293-83651312 None:intergenic 55.0%
CCCATTGCTGTCGAGTGTGT+AGG + chr7_2:83651854-83651873 None:intergenic 55.0%
GAGTGCTATGGAGCAGCAGA+TGG - chr7_2:83652081-83652100 Msa1083360:CDS 55.0%
TGCTATGGAGCAGCAGATGG+TGG - chr7_2:83652084-83652103 Msa1083360:CDS 55.0%
CCTGAATCGGGGTTTGACTC+GGG + chr7_2:83652536-83652555 None:intergenic 55.0%
CCCTGAATCGGGGTTTGACT+CGG + chr7_2:83652537-83652556 None:intergenic 55.0%
CCGAGTCAAACCCCGATTCA+GGG - chr7_2:83652534-83652553 Msa1083360:intron 55.0%
CGAGTCAAACCCCGATTCAG+GGG - chr7_2:83652535-83652554 Msa1083360:intron 55.0%
CAGAAGTCACCCCTGAATCG+GGG + chr7_2:83652547-83652566 None:intergenic 55.0%
TGGAGCGACAACTAACGCGG+AGG - chr7_2:83649626-83649645 Msa1083360:three_prime_UTR 60.0%
CCGTAGGCGGAGATGGAAAC+GGG + chr7_2:83649780-83649799 None:intergenic 60.0%
CCCGTTTCCATCTCCGCCTA+CGG - chr7_2:83649777-83649796 Msa1083360:three_prime_UTR 60.0%
!! ACGAGTGGTGTCACCGTAGG+CGG + chr7_2:83649793-83649812 None:intergenic 60.0%
! CAGCACGCGCTTTCTAGCAC+CGG - chr7_2:83649828-83649847 Msa1083360:three_prime_UTR 60.0%
! CGACATGCTGTTCTGGGCAG+TGG - chr7_2:83650848-83650867 Msa1083360:CDS 60.0%
GGAGGACCTCCACTAACCAG+TGG - chr7_2:83651044-83651063 Msa1083360:CDS 60.0%
GCTCAGACACAGCAACAGGG+GGG - chr7_2:83651140-83651159 Msa1083360:CDS 60.0%
GCCATGAATCCACCCCCAGT+TGG - chr7_2:83651281-83651300 Msa1083360:CDS 60.0%
!! CAACTACACCGGTGCCACCT+AGG - chr7_2:83651588-83651607 Msa1083360:CDS 60.0%
CCAACAGTCCTAGGTGGCAC+CGG + chr7_2:83651599-83651618 None:intergenic 60.0%
ACTCCGTTGCGGAACAGTGC+GGG + chr7_2:83651708-83651727 None:intergenic 60.0%
CACTCCGTTGCGGAACAGTG+CGG + chr7_2:83651709-83651728 None:intergenic 60.0%
CCCGAGTCAAACCCCGATTC+AGG - chr7_2:83652533-83652552 Msa1083360:intron 60.0%
! CGCGGAGGCGCAGTATACGA+CGG - chr7_2:83649641-83649660 Msa1083360:three_prime_UTR 65.0%
! GGTGTCACCGTAGGCGGAGA+TGG + chr7_2:83649787-83649806 None:intergenic 65.0%
AGCGCGTGCTGTACAGACGC+AGG + chr7_2:83649819-83649838 None:intergenic 65.0%
!! CCGGTGCCACCTAGGACTGT+TGG - chr7_2:83651596-83651615 Msa1083360:CDS 65.0%
ACCCCCGCACTGTTCCGCAA+CGG - chr7_2:83651702-83651721 Msa1083360:CDS 65.0%
TCCGTTGCGGAACAGTGCGG+GGG + chr7_2:83651706-83651725 None:intergenic 65.0%
CTCCGTTGCGGAACAGTGCG+GGG + chr7_2:83651707-83651726 None:intergenic 65.0%
CGCACTGTTCCGCAACGGAG+TGG - chr7_2:83651707-83651726 Msa1083360:CDS 65.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 83649199 83653846 83649199 ID=Msa1083360;Name=Msa1083360
chr7_2 mRNA 83649199 83653846 83649199 ID=Msa1083360-mRNA-1;Parent=Msa1083360;Name=Msa1083360-mRNA-1;_AED=0.01;_eAED=0.01;_QI=416|1|1|1|1|1|3|1272|638
chr7_2 exon 83649199 83650657 83649199 ID=Msa1083360-mRNA-1:exon:22012;Parent=Msa1083360-mRNA-1
chr7_2 exon 83650764 83652231 83650764 ID=Msa1083360-mRNA-1:exon:22011;Parent=Msa1083360-mRNA-1
chr7_2 exon 83653169 83653846 83653169 ID=Msa1083360-mRNA-1:exon:22010;Parent=Msa1083360-mRNA-1
chr7_2 five_prime_UTR 83653431 83653846 83653431 ID=Msa1083360-mRNA-1:five_prime_utr;Parent=Msa1083360-mRNA-1
chr7_2 CDS 83653169 83653430 83653169 ID=Msa1083360-mRNA-1:cds;Parent=Msa1083360-mRNA-1
chr7_2 CDS 83650764 83652231 83650764 ID=Msa1083360-mRNA-1:cds;Parent=Msa1083360-mRNA-1
chr7_2 CDS 83650471 83650657 83650471 ID=Msa1083360-mRNA-1:cds;Parent=Msa1083360-mRNA-1
chr7_2 three_prime_UTR 83649199 83650470 83649199 ID=Msa1083360-mRNA-1:three_prime_utr;Parent=Msa1083360-mRNA-1
Gene Sequence

>Msa1083360

ATGGGCGGAGGTGGAGCGACAACTAACGCGGAGGCGCAGTATACGACGGCGAAGATATCGGTATGGTGGGATATAGAAAACTGTCATGTTCCTAAAGGCTCCGATCCACATGCAATTGCGCAGAATATCAGTTCAGCACTTGTTCGTATGAACTATTGTGGTCCCGTTTCCATCTCCGCCTACGGTGACACCACTCGTATACCTGCGTCTGTACAGCACGCGCTTTCTAGCACCGGAATTTCACTTAATCATGTTCCCGCCGGTGTGAAAGATGCAAGCGATAAGAAGATCCTTGTCGACATGCTGTTCTGGGCAGTGGACAACCCTGCACCTGCGAATTATTTATTGATTTCGGGTGATCGAGATTTTTCTAATGCCCTCCATCAACTGCGAATGAGGAGGTATAATATTCTTCTCGCACAACCTCAAAAAGCATCTGCACCACTAGTTGCAGCAGCTAAGAGTGTATGGCTTTGGACTACTCTCTTAGCTGGAGGACCTCCACTAACCAGTGGTGATACACAACAACTCAGTAATAGTAGCTTCTTACCGTCTTCTGAAACTATACAAGTTCCTGTCTCAAATGCTGCTCAGACACAGCAACAGGGGGGTCCCTATTCTGAAATTCATGCTGGAAATTCAAATGTTCAAAACGGAGGAAGGGGATTTGATTCTAGATATCAGGGTAGACCAACTTGGAGAAACCCGAGTCAACCAAATGGACCGAAAGCCATGAATCCACCCCCAGTTGGACTTCAAGATAACCGTAATAATGTAAACAATTATCGACCTGGCAACTATAATCCAAATGTTCCTCAAAGTGGATCAACCACAAACTTTGAGCGCGCCAATTCTGATCCATTATGGAGCAATAATGGTAATCAACAAGGAAATCATCAAAATCAACAGGGAAATCATCAAAATCAACAGGGGAATCATCAAAATCCATATTCCCAGCCATTAAGACCAAACGGTTTTCCATTGCAACCTCCTTTTGCACCTAGTAATTCATATTCTCCAAATTCCCATACTTTTGCAACTACACCGGTGCCACCTAGGACTGTTGGCAACAATTTCAGTACAGGATCACCTAGAACTGTGCCAGATATTGGCAATCTGAACATATCTGGTTATCCCAATAATGGTCATAACCCCCGCACTGTTCCGCAACGGAGTGGAGATTTGAAACCGAATCCTAAGAGTAGTGCTCCACTTCCGGTAAGATCAACGAATGAACAAAATGGACATATGGTGCATAGCAGTACCACTCAAGGCTATCCACATGGTCCAGAATATCAACCTACACACTCGACAGCAATGGGTAATAATAAACTTCCCTCTAATGGTAAGTGGGGATCTTCAGGTTGTCCTAAACCTTCTGAATATGTACAAGGCCTTATAGGTGTTGTTTTACTTGCCCTGAACTCACTAAAAAATGCCAAGATGATGCCAACTGAGAAGAATATAACTGATAGCATCCGTTATGGAGATCCCAAGCATCGCAACACCGATGTTAAGAAAGCTCTGGAGAGTGCTATGGAGCAGCAGATGGTGGTAAAACAAAATTTAGGTGCTTTAACGCTGTATGTTGGTAAGAATGACAAACTCTGGAAGTGTGTAAATCCCTTAGGTGGAAATCCTAAACAGCACTCCAAAGAAATTTGGGACGAAATTCAAAATTTTCTAACAACCCCTGCTGGTAGATCGGCAATAATGGATACACAGTGCAAGTATGAAGCAGGTATTGTGATAAAGAGCATGTGTTTTAAAGATCTTGCTTTGGGCGATGTCCTTCAGATATTGAACATGGTGATAACCCATAAAAAATGGATAATTCATCAGCAGTCTGGCTGGCAACCACTCATCCTTACTCTTCCCGAGTCAAACCCCGATTCAGGGGTGACTTCTGACGCATAG
Protein sequence

>Msa1083360

MGGGGATTNAEAQYTTAKISVWWDIENCHVPKGSDPHAIAQNISSALVRMNYCGPVSISAYGDTTRIPASVQHALSSTGISLNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPQKASAPLVAAAKSVWLWTTLLAGGPPLTSGDTQQLSNSSFLPSSETIQVPVSNAAQTQQQGGPYSEIHAGNSNVQNGGRGFDSRYQGRPTWRNPSQPNGPKAMNPPPVGLQDNRNNVNNYRPGNYNPNVPQSGSTTNFERANSDPLWSNNGNQQGNHQNQQGNHQNQQGNHQNPYSQPLRPNGFPLQPPFAPSNSYSPNSHTFATTPVPPRTVGNNFSTGSPRTVPDIGNLNISGYPNNGHNPRTVPQRSGDLKPNPKSSAPLPVRSTNEQNGHMVHSSTTQGYPHGPEYQPTHSTAMGNNKLPSNGKWGSSGCPKPSEYVQGLIGVVLLALNSLKNAKMMPTEKNITDSIRYGDPKHRNTDVKKALESAMEQQMVVKQNLGALTLYVGKNDKLWKCVNPLGGNPKQHSKEIWDEIQNFLTTPAGRSAIMDTQCKYEAGIVIKSMCFKDLALGDVLQILNMVITHKKWIIHQQSGWQPLILTLPESNPDSGVTSDA*