AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1128110

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1128110 MtrunA17_Chr7g0271391 99.373 638 4 0 1 638 1 638 0.0 1305
Msa1128110 MtrunA17_Chr7g0270601 75.776 161 38 1 12 171 6 166 4.57e-78 256
Msa1128110 MtrunA17_Chr7g0270601 50.000 172 86 0 461 632 292 463 6.53e-47 172
Msa1128110 MtrunA17_Chr3g0098211 48.718 156 76 3 19 173 176 328 2.17e-39 148
Msa1128110 MtrunA17_Chr3g0098211 44.667 150 79 2 17 164 10 157 2.75e-25 107
Msa1128110 MtrunA17_Chr3g0129561 46.980 149 79 0 17 165 55 203 3.23e-38 152
Msa1128110 MtrunA17_Chr1g0155901 43.452 168 85 4 11 169 2 168 6.15e-31 119
Msa1128110 MtrunA17_Chr4g0044701 34.286 245 129 6 19 245 48 278 6.02e-29 121
Msa1128110 MtrunA17_Chr8g0338201 37.037 162 82 5 18 165 33 188 9.13e-21 96.7
Msa1128110 MtrunA17_Chr8g0338651 35.443 158 82 4 22 165 35 186 1.18e-18 90.1
Msa1128110 MtrunA17_Chr4g0055131 35.404 161 85 4 19 165 40 195 4.73e-18 87.8
Msa1128110 MtrunA17_Chr7g0269191 46.000 100 53 1 534 632 9 108 6.80e-18 79.7
Msa1128110 MtrunA17_Chr7g0247681 38.136 118 66 3 54 165 2 118 4.39e-12 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1128110 AT5G61190.4 58.462 260 81 5 8 265 2 236 1.90e-87 288
Msa1128110 AT5G61190.2 58.462 260 81 5 8 265 2 236 1.90e-87 288
Msa1128110 AT3G62200.1 79.762 168 34 0 10 177 21 188 3.11e-87 286
Msa1128110 AT5G61190.8 58.462 260 81 5 8 265 2 236 1.15e-86 289
Msa1128110 AT5G61190.11 58.462 260 81 5 8 265 2 236 5.19e-86 289
Msa1128110 AT5G61190.1 69.307 202 60 2 8 207 2 203 5.81e-86 290
Msa1128110 AT5G61190.10 69.307 202 60 2 8 207 2 203 8.63e-86 289
Msa1128110 AT5G61190.6 58.462 260 81 5 8 265 2 236 1.65e-85 289
Msa1128110 AT5G61190.5 58.462 260 81 5 8 265 2 236 1.67e-85 289
Msa1128110 AT5G61190.9 69.307 202 60 2 8 207 2 203 1.82e-85 289
Msa1128110 AT3G62210.1 73.333 180 45 1 5 181 10 189 1.86e-85 269
Msa1128110 AT5G61180.1 60.674 178 52 1 9 168 72 249 1.25e-69 231
Msa1128110 AT3G61028.3 45.181 166 88 3 15 177 78 243 1.95e-43 157
Msa1128110 AT3G61028.1 45.181 166 88 3 15 177 78 243 1.95e-43 157
Msa1128110 AT3G60940.1 47.429 175 83 3 12 177 76 250 3.86e-43 156
Msa1128110 AT3G60940.2 47.429 175 83 3 12 177 76 250 3.86e-43 156
Msa1128110 AT5G64710.1 42.138 159 91 1 11 168 54 212 1.18e-37 150
Msa1128110 AT5G09840.1 41.935 155 90 0 11 165 65 219 2.86e-37 149
Msa1128110 AT5G61190.7 66.055 109 35 2 101 207 1 109 2.21e-35 143
Msa1128110 AT5G61190.3 66.055 109 35 2 101 207 1 109 2.21e-35 143
Msa1128110 AT2G15560.2 41.290 155 87 3 15 165 46 200 4.55e-27 115
Msa1128110 AT2G15560.1 41.290 155 87 3 15 165 46 200 4.96e-27 115
Msa1128110 AT3G62850.1 30.841 214 131 6 9 211 230 437 6.86e-22 99.8
Msa1128110 AT3G62850.1 31.210 157 102 2 10 163 7 160 3.57e-18 88.2
Msa1128110 AT3G61028.2 40.517 116 67 2 15 128 78 193 1.08e-21 95.5
Msa1128110 AT3G62050.1 36.434 129 73 3 14 139 9 131 4.28e-20 88.2
Msa1128110 AT5G35640.1 31.111 135 88 2 17 147 32 165 7.28e-15 73.9
Msa1128110 AT3G61090.1 29.480 173 106 5 18 180 12 178 2.13e-14 72.4
Msa1128110 AT5G64710.2 41.463 82 47 1 88 168 6 87 3.65e-14 76.3
Msa1128110 AT3G62460.1 29.927 137 88 3 18 149 58 191 6.53e-12 65.5
Msa1128110 AT1G01355.1 32.450 151 96 3 28 174 11 159 1.39e-11 65.1
Msa1128110 AT3G56730.6 33.019 106 65 1 15 120 7 106 2.53e-11 63.2
Msa1128110 AT3G61100.1 28.485 165 98 5 18 170 8 164 2.93e-11 62.8
Msa1128110 AT3G56730.2 30.357 112 72 1 9 120 9 114 3.83e-11 62.8
Msa1128110 AT3G56730.3 30.357 112 72 1 9 120 9 114 3.83e-11 62.8
Msa1128110 AT1G01355.3 31.788 151 93 3 28 174 11 155 4.30e-11 63.5
Msa1128110 AT3G56730.1 32.692 104 64 1 17 120 11 108 8.34e-11 61.6
Msa1128110 AT5G64450.1 35.000 120 64 6 52 162 34 148 9.09e-11 61.6

Find 278 sgRNAs with CRISPR-Local

Find 358 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCGAATTATTTATTGATTT+CGG 0.150955 7_3:-79910411 Msa1128110:CDS
GCGAATTATTTATTGATTTC+GGG 0.173410 7_3:-79910410 Msa1128110:CDS
GGAAAACCGTTTGGTCTTAA+TGG 0.186135 7_3:+79909786 None:intergenic
AACAGCACTCCAAAGAAATT+TGG 0.210078 7_3:-79909101 Msa1128110:CDS
TCCTTGTCGACATGCTGTTC+TGG 0.215607 7_3:-79910454 Msa1128110:CDS
CCAATATCTGGCACAGTTCT+AGG 0.226868 7_3:+79909654 None:intergenic
AATTCGTCGTCGGAGATAAA+TGG 0.230773 7_3:-79908518 Msa1128110:three_prime_UTR
GTTGCAAAAGTATGGGAATT+TGG 0.231833 7_3:+79909726 None:intergenic
GGGATTTGATTCTAGATATC+AGG 0.233096 7_3:-79910081 Msa1128110:CDS
AATTTCGTCCCAAATTTCTT+TGG 0.251306 7_3:+79909092 None:intergenic
ATACTTATATAGATAAAATT+AGG 0.259196 7_3:-79911765 Msa1128110:five_prime_UTR
TTTGCTTAGTTAACTATATA+TGG 0.262422 7_3:+79911910 None:intergenic
GGTCTTAATGGCTGGGAATA+TGG 0.268984 7_3:+79909798 None:intergenic
ATTTCTTTGGAGTGCTGTTT+AGG 0.279080 7_3:+79909105 None:intergenic
GAATATGTACAAGGCCTTAT+AGG 0.288105 7_3:-79909363 Msa1128110:CDS
CCATACCAAACTGTAGTATT+TGG 0.290881 7_3:+79908451 None:intergenic
TTATCCGGAAATACAGCTTT+TGG 0.291189 7_3:-79907823 Msa1128110:three_prime_UTR
TTTCAGGGTGTATTGTAAAA+TGG 0.292307 7_3:-79908141 Msa1128110:three_prime_UTR
AGCGTCAAATGAACAAATTC+TGG 0.298140 7_3:+79908114 None:intergenic
CTGGCTCTATATACTGAATT+TGG 0.300005 7_3:-79907796 Msa1128110:three_prime_UTR
AAGTTTCCATTACCATAATC+AGG 0.300984 7_3:+79908714 None:intergenic
ATACGACAGCAATTGGAAAA+AGG 0.302939 7_3:-79912022 Msa1128110:five_prime_UTR
CAAACTCTTAATTTGCTATC+TGG 0.304458 7_3:-79907995 Msa1128110:three_prime_UTR
ACATCCAAAAGCTGTATTTC+CGG 0.304877 7_3:+79907819 None:intergenic
TGTACATATTCAGAAGGTTT+AGG 0.309220 7_3:+79909375 None:intergenic
CCTAGAACTGTGCCAGATAT+TGG 0.310900 7_3:-79909654 Msa1128110:CDS
TGCTGGTAGATCGGCAATAA+TGG 0.316014 7_3:-79909049 Msa1128110:CDS
GCATAGCAGCACCCTGATTA+TGG 0.320572 7_3:-79908726 Msa1128110:exon
ACCTCCTCATTCGCAGTTGA+TGG 0.324550 7_3:+79910363 None:intergenic
CCGGTGTAGTTGCAAAAGTA+TGG 0.328541 7_3:+79909718 None:intergenic
AATGGTAAGTGGGGATCTTC+AGG 0.332723 7_3:-79909402 Msa1128110:CDS
CCAGCATGAATTTCAGAATA+GGG 0.333740 7_3:+79910131 None:intergenic
CCTGAGTCAAACCCCGATTC+AGG 0.342982 7_3:-79908762 Msa1128110:CDS
GCATGTGGATCGGAGCCTTT+AGG 0.345450 7_3:+79911583 None:intergenic
ATTTAAATTTACATTTGCTT+TGG 0.350575 7_3:-79907692 Msa1128110:three_prime_UTR
AATAATAAACTTCCCTCTAA+TGG 0.351040 7_3:-79909420 Msa1128110:CDS
AGATCAACGAATGAACAAAA+TGG 0.352005 7_3:-79909522 Msa1128110:CDS
ATATTTCCTTCAATCTATCT+TGG 0.354451 7_3:-79908218 Msa1128110:three_prime_UTR
ACAAGGTATGTTTATTATGA+TGG 0.355179 7_3:-79907964 Msa1128110:three_prime_UTR
ATGTTCAGATTGCCAATATC+TGG 0.357086 7_3:+79909642 None:intergenic
CACTTAAAATTGCACAAGAT+TGG 0.358644 7_3:-79908040 Msa1128110:three_prime_UTR
AACATCGGTGTTGCGATGCT+TGG 0.359132 7_3:+79909251 None:intergenic
CCTTATTAGACTGGACTACT+TGG 0.359523 7_3:-79908295 Msa1128110:three_prime_UTR
CGGTTATCTTGAAGTCCAAC+TGG 0.361639 7_3:+79909999 None:intergenic
GATAATTGTTTACATTATTA+CGG 0.362001 7_3:+79909979 None:intergenic
GATCCATTATGGAGCAATAA+TGG 0.362238 7_3:-79909888 Msa1128110:CDS
CCAAGTAGTCCAGTCTAATA+AGG 0.362296 7_3:+79908295 None:intergenic
GATCCACTTTGAGGAACATT+TGG 0.363780 7_3:+79909939 None:intergenic
TTACCATTATTGCTCCATAA+TGG 0.363932 7_3:+79909885 None:intergenic
TGTTCATTCGTTGATCTTAC+CGG 0.368690 7_3:+79909528 None:intergenic
AGAATCATTCGAATAATTAC+TGG 0.374269 7_3:+79908634 None:intergenic
AACCGTTTGGTCTTAATGGC+TGG 0.379988 7_3:+79909790 None:intergenic
AGGAAATCATCAAAATCAAC+AGG 0.380452 7_3:-79909856 Msa1128110:CDS
ATTGGCAATCTGAACATATC+TGG 0.381321 7_3:-79909636 Msa1128110:CDS
CGAGCAAAATGTATATTTGT+AGG 0.381945 7_3:+79908328 None:intergenic
TGCTGCTCAGACACAGCAAC+AGG 0.385298 7_3:-79910159 Msa1128110:CDS
AGGAAATATCTCGACACATT+TGG 0.387421 7_3:+79908232 None:intergenic
AGATCCCCACTTACCATTAG+AGG 0.389364 7_3:+79909407 None:intergenic
AACATGATTAAGTGAAATTC+CGG 0.391711 7_3:+79911441 None:intergenic
GGGAAATCATCAAAATCAAC+AGG 0.391798 7_3:-79909835 Msa1128110:CDS
TTCATGGCTTTCGGTCCATT+TGG 0.392243 7_3:+79910029 None:intergenic
GGAAGTGGAGCACTACTCTT+AGG 0.394120 7_3:+79909549 None:intergenic
TCTCGTATGAATCAAACTAT+AGG 0.394834 7_3:-79908605 Msa1128110:three_prime_UTR
AATAAATAATTCGCAGGTGC+AGG 0.398280 7_3:+79910419 None:intergenic
CCATTGCATACGACAGCAAT+TGG 0.398911 7_3:-79912029 Msa1128110:five_prime_UTR
TTCGTTGATCTTACCGGAAG+TGG 0.402973 7_3:+79909534 None:intergenic
TTCGGTCCATTTGGTTGACT+CGG 0.404852 7_3:+79910038 None:intergenic
CAGCTAAGAGTGTATGGCTT+TGG 0.407793 7_3:-79910289 Msa1128110:CDS
AGCAAATGTAAATTTAAATA+CGG 0.409351 7_3:+79907696 None:intergenic
TAAGAGTAGTGCTCCACTTC+CGG 0.410866 7_3:-79909547 Msa1128110:CDS
TCTTGCGTATTGCATGGGTT+TGG 0.412229 7_3:+79912064 None:intergenic
CAAGTAAAACAACACCTATA+AGG 0.412949 7_3:+79909349 None:intergenic
TTCGAAGTTTCAAATGTTGC+AGG 0.413026 7_3:-79908086 Msa1128110:three_prime_UTR
TCAGAAGTCACCCCTGAATC+GGG 0.413185 7_3:+79908750 None:intergenic
ACTCCGTTGCGGAACAGTGC+GGG 0.413493 7_3:+79909590 None:intergenic
TATGATGTTGAATAATTATC+CGG 0.413966 7_3:-79907838 Msa1128110:three_prime_UTR
GAGTGTGTAGGTTGATATTC+TGG 0.418613 7_3:+79909456 None:intergenic
TATCTCCGACGACGAATTGA+AGG 0.419671 7_3:+79908523 None:intergenic
CCTTGTCGACATGCTGTTCT+GGG 0.419680 7_3:-79910453 Msa1128110:CDS
GATCCACTGTGATGTATAAC+GGG 0.419901 7_3:+79908407 None:intergenic
ACAGCACTCCAAAGAAATTT+GGG 0.420086 7_3:-79909100 Msa1128110:CDS
CAGCTACCACTGACATTAAG+AGG 0.421531 7_3:+79907729 None:intergenic
CTTCTCAGTTGGCATCATCT+TGG 0.424167 7_3:+79909305 None:intergenic
ACATCACAGTGGATCTATCT+TGG 0.424998 7_3:-79908399 Msa1128110:three_prime_UTR
GCGCCAATTCTGATCCATTA+TGG 0.426102 7_3:-79909899 Msa1128110:CDS
CGAATAATTACTGGTCCAAC+TGG 0.427304 7_3:+79908643 None:intergenic
TGAAGAGACTACACAAGATT+CGG 0.427403 7_3:+79911942 None:intergenic
GCTCCATAATGGATCAGAAT+TGG 0.428216 7_3:+79909896 None:intergenic
CAGCACCCTGATTATGGTAA+TGG 0.428511 7_3:-79908720 Msa1128110:three_prime_UTR
CAACAAATACAAGTGAAAAC+TGG 0.432305 7_3:+79907537 None:intergenic
CCAATTGCTGTCGTATGCAA+TGG 0.432591 7_3:+79912029 None:intergenic
TAGTAAAGGTGAAGAGATTG+AGG 0.432786 7_3:+79911875 None:intergenic
ATATCTGGTTATCCCAATAA+TGG 0.432994 7_3:-79909621 Msa1128110:CDS
TTGAGGTGGAGAGTAGTGTT+TGG 0.441638 7_3:+79912097 None:intergenic
GTATACGACGGCGAAGATAT+CGG 0.442192 7_3:-79911635 Msa1128110:CDS
TTGGTGATTTAGTCGCGAAT+TGG 0.443335 7_3:-79907777 Msa1128110:three_prime_UTR
CTAAATTCTTCATTGTATCA+TGG 0.446475 7_3:-79907500 Msa1128110:three_prime_UTR
ACATCGGTGTTGCGATGCTT+GGG 0.448328 7_3:+79909252 None:intergenic
GTCAGAAGTCACCCCTGAAT+CGG 0.449046 7_3:+79908749 None:intergenic
GAATGAACAAAATGGACATA+TGG 0.450541 7_3:-79909514 Msa1128110:CDS
TCAGCAACAAGAAATGCAAC+GGG 0.451131 7_3:+79907876 None:intergenic
AAATACCAAATACTACAGTT+TGG 0.452518 7_3:-79908456 Msa1128110:three_prime_UTR
TCCAGCATGAATTTCAGAAT+AGG 0.452577 7_3:+79910130 None:intergenic
TTTCTTCTTGCGTATTGCAT+GGG 0.457197 7_3:+79912059 None:intergenic
TATGAATTACTAGGTGCAAA+AGG 0.459744 7_3:+79909753 None:intergenic
TTTAGTCGCGAATTGGTCTC+TGG 0.459938 7_3:-79907770 Msa1128110:three_prime_UTR
ACCGTTTGGTCTTAATGGCT+GGG 0.462546 7_3:+79909791 None:intergenic
CTTTGGACTACTCTCTTAGC+TGG 0.463279 7_3:-79910272 Msa1128110:CDS
TGTGTATCACCACTGGTTAG+TGG 0.463529 7_3:+79910242 None:intergenic
GGAGTTCTTCCTTATTAGAC+TGG 0.465053 7_3:-79908304 Msa1128110:three_prime_UTR
TGGATAATTCATCAGCAGTC+TGG 0.469032 7_3:-79908810 Msa1128110:CDS
TGCTGTCGTATGCAATGGGT+CGG 0.469423 7_3:+79912034 None:intergenic
ATGGTGGTAAAACAAAATTT+AGG 0.469766 7_3:-79909195 Msa1128110:CDS
CCCTCCATCAACTGCGAATG+AGG 0.471098 7_3:-79910367 Msa1128110:CDS
GGAGCACTACTCTTAGGATT+CGG 0.471163 7_3:+79909555 None:intergenic
CAATTGCTGTCGTATGCAAT+GGG 0.472372 7_3:+79912030 None:intergenic
CGACATGCTGTTCTGGGCAG+TGG 0.473730 7_3:-79910447 Msa1128110:CDS
ATAACTGATAGCATCCGTTA+TGG 0.474762 7_3:-79909279 Msa1128110:CDS
ATTGGCGCGCTCAAAGTTTG+TGG 0.477749 7_3:+79909914 None:intergenic
TAGCGATCAATTTGTTTGAT+CGG 0.477979 7_3:-79907585 Msa1128110:three_prime_UTR
TTGCAGCAGCTAAGAGTGTA+TGG 0.479275 7_3:-79910295 Msa1128110:CDS
ACATTTGGATTATAGTTGCC+AGG 0.480104 7_3:+79909954 None:intergenic
GGTTGCAATGGAAAACCGTT+TGG 0.481798 7_3:+79909777 None:intergenic
GGTGTCACCGTAGGCGGAGA+TGG 0.483267 7_3:+79911504 None:intergenic
GTTGCATTTCTTGTTGCTGA+TGG 0.483586 7_3:-79907873 Msa1128110:three_prime_UTR
TAAGATCAGATGGGCGGAGG+TGG 0.484744 7_3:-79911682 Msa1128110:exon
TCAGTTATATTCTTCTCAGT+TGG 0.486950 7_3:+79909294 None:intergenic
AACTTCCCTCTAATGGTAAG+TGG 0.488285 7_3:-79909413 Msa1128110:CDS
TTAGTTTGAATCGATCTTTG+TGG 0.488974 7_3:-79911732 Msa1128110:five_prime_UTR
CCGTAGGCGGAGATGGAAAC+GGG 0.489402 7_3:+79911511 None:intergenic
TCTATCTTGGTGACCAACCT+TGG 0.490918 7_3:-79908205 Msa1128110:three_prime_UTR
CCCGTTTCCATCTCCGCCTA+CGG 0.493859 7_3:-79911511 Msa1128110:CDS
GAAAACTGTCATGTTCCTAA+AGG 0.494196 7_3:-79911598 Msa1128110:CDS
TGGAAGTGTGTAAATCCCTT+AGG 0.494619 7_3:-79909135 Msa1128110:CDS
CAAATGTTCAAAACGGAGGA+AGG 0.495613 7_3:-79910103 Msa1128110:CDS
CTGTTTAGGATTTCCACCTA+AGG 0.496032 7_3:+79909119 None:intergenic
TATCAAATATATCACTAAAA+CGG 0.496693 7_3:+79908270 None:intergenic
CCTACACACTCGACAGCAAT+GGG 0.496891 7_3:-79909444 Msa1128110:CDS
TTGGTAAGAATGACAAACTC+TGG 0.500710 7_3:-79909155 Msa1128110:CDS
AAATTGTTGCCAACAGTCCT+AGG 0.502255 7_3:+79909690 None:intergenic
CCCTATTCTGAAATTCATGC+TGG 0.505000 7_3:-79910131 Msa1128110:CDS
TTTGGAGAATATGAATTACT+AGG 0.506209 7_3:+79909744 None:intergenic
AACAACCCCTGCTGGTAGAT+CGG 0.506607 7_3:-79909058 Msa1128110:CDS
CTGAGTCAAACCCCGATTCA+GGG 0.507183 7_3:-79908761 Msa1128110:CDS
CTCCGTTGCGGAACAGTGCG+GGG 0.510872 7_3:+79909591 None:intergenic
TCGGTCCATTTGGTTGACTC+GGG 0.511015 7_3:+79910039 None:intergenic
ACCGTAGGCGGAGATGGAAA+CGG 0.511972 7_3:+79911510 None:intergenic
AATCCAAATGTTCCTCAAAG+TGG 0.513048 7_3:-79909942 Msa1128110:CDS
AGATCCACTGTGATGTATAA+CGG 0.515531 7_3:+79908406 None:intergenic
CCTGAATCGGGGTTTGACTC+AGG 0.515729 7_3:+79908762 None:intergenic
TATGGTAATGGAAACTTGAA+AGG 0.516440 7_3:-79908708 Msa1128110:three_prime_UTR
AATGTTCAAAACGGAGGAAG+GGG 0.517066 7_3:-79910101 Msa1128110:CDS
TAATTCATCAGCAGTCTGGC+TGG 0.517933 7_3:-79908806 Msa1128110:CDS
TAATTACTGGTCCAACTGGC+TGG 0.519557 7_3:+79908647 None:intergenic
CCAAATACTACAGTTTGGTA+TGG 0.522466 7_3:-79908451 Msa1128110:three_prime_UTR
CTATTGCCTCTTAATGTCAG+TGG 0.523753 7_3:-79907735 Msa1128110:three_prime_UTR
TGACTCGGGTTTCTCCAAGT+TGG 0.524058 7_3:+79910053 None:intergenic
TATTTCTGTAGGTATGAAGC+AGG 0.525565 7_3:-79908918 Msa1128110:intron
GTTGGCAACAATTTCAGTAC+AGG 0.526636 7_3:-79909681 Msa1128110:CDS
TCCCAGCCATTAAGACCAAA+CGG 0.527762 7_3:-79909792 Msa1128110:CDS
TTTGTGGTTGATCCACTTTG+AGG 0.528704 7_3:+79909930 None:intergenic
CAACTACACCGGTGCCACCT+AGG 0.529046 7_3:-79909707 Msa1128110:CDS
GATATCAGGGTAGACCAACT+TGG 0.529804 7_3:-79910067 Msa1128110:CDS
TTGGATTGAGAGACTTGAGG+TGG 0.530189 7_3:+79912083 None:intergenic
ATTATTGCCGATCTACCAGC+AGG 0.530418 7_3:+79909051 None:intergenic
CACCGATGTTAAGAAAGCTC+TGG 0.531404 7_3:-79909238 Msa1128110:CDS
ACTTCCCTCTAATGGTAAGT+GGG 0.534715 7_3:-79909412 Msa1128110:CDS
GGAAATTCAAATGTTCAAAA+CGG 0.536448 7_3:-79910110 Msa1128110:CDS
GATCTTTGTGGAATTAAGAT+CGG 0.538325 7_3:-79911720 Msa1128110:five_prime_UTR
GAAAGCTCTGGAGAGTGCTA+TGG 0.538754 7_3:-79909226 Msa1128110:CDS
CCAACAGTCCTAGGTGGCAC+CGG 0.539658 7_3:+79909699 None:intergenic
AGTAAAGGTGAAGAGATTGA+GGG 0.541297 7_3:+79911876 None:intergenic
ACAGTTTGGTATGGTTGCTG+AGG 0.542168 7_3:-79908442 Msa1128110:three_prime_UTR
ACCTACACACTCGACAGCAA+TGG 0.545629 7_3:-79909445 Msa1128110:CDS
AGATCGGAGATAAGATCAGA+TGG 0.545923 7_3:-79911692 Msa1128110:exon
GCTGTCGTATGCAATGGGTC+GGG 0.547190 7_3:+79912035 None:intergenic
ATAGAGTCAAAGCATAGTAA+AGG 0.547809 7_3:+79911861 None:intergenic
TTCAAATCTCCACTCCGTTG+CGG 0.550016 7_3:+79909579 None:intergenic
GTCTGAGCAGCATTTGAGAC+AGG 0.550440 7_3:+79910170 None:intergenic
TGAATATATCACCAGCCAGT+TGG 0.552081 7_3:-79908658 Msa1128110:three_prime_UTR
CAATGCCTTCAATTCGTCGT+CGG 0.554346 7_3:-79908528 Msa1128110:three_prime_UTR
AGTTTCCATTACCATAATCA+GGG 0.555080 7_3:+79908715 None:intergenic
GGTTATCTTGAAGTCCAACT+GGG 0.555376 7_3:+79910000 None:intergenic
CGGTGTAGTTGCAAAAGTAT+GGG 0.556383 7_3:+79909719 None:intergenic
CTGCGCAATTGCATGTGGAT+CGG 0.560127 7_3:+79911573 None:intergenic
TGTTTAGGATTTCCACCTAA+GGG 0.560176 7_3:+79909120 None:intergenic
ATTCAACATCATAACTCTGT+AGG 0.560856 7_3:+79907848 None:intergenic
CCGGTGCCACCTAGGACTGT+TGG 0.561100 7_3:-79909699 Msa1128110:CDS
GGATTTGATTCTAGATATCA+GGG 0.561545 7_3:-79910080 Msa1128110:CDS
CTCTTAGCTGCTGCAACTAG+TGG 0.562484 7_3:+79910302 None:intergenic
TGGACTACTCTCTTAGCTGG+AGG 0.562680 7_3:-79910269 Msa1128110:CDS
AGGCCTTGTACATATTCAGA+AGG 0.565970 7_3:+79909369 None:intergenic
AAATGTTCAAAACGGAGGAA+GGG 0.566489 7_3:-79910102 Msa1128110:CDS
GGCGAAGATATCGGTATGGT+GGG 0.567110 7_3:-79911626 Msa1128110:CDS
GGTGCTTTAACGCTGTATGT+TGG 0.568779 7_3:-79909174 Msa1128110:CDS
ATAAATAATTCGCAGGTGCA+GGG 0.569096 7_3:+79910420 None:intergenic
AGAAACCCGAGTCAACCAAA+TGG 0.569109 7_3:-79910044 Msa1128110:CDS
CGGCGAAGATATCGGTATGG+TGG 0.569397 7_3:-79911627 Msa1128110:CDS
GTGAATGAAAGATATGTACT+TGG 0.570516 7_3:+79911985 None:intergenic
TGGTCACCAAGATAGATTGA+AGG 0.573794 7_3:+79908212 None:intergenic
ATCAGCAACAAGAAATGCAA+CGG 0.574006 7_3:+79907875 None:intergenic
GAAATCAATAAATAATTCGC+AGG 0.575414 7_3:+79910413 None:intergenic
CTTCCCTCTAATGGTAAGTG+GGG 0.577253 7_3:-79909411 Msa1128110:CDS
TCCTCATTCGCAGTTGATGG+AGG 0.578055 7_3:+79910366 None:intergenic
GGTGCAAAAGGAGGTTGCAA+TGG 0.586116 7_3:+79909765 None:intergenic
CGCACTGTTCCGCAACGGAG+TGG 0.587754 7_3:-79909588 Msa1128110:CDS
CTCCAGAGCTTTCTTAACAT+CGG 0.590270 7_3:+79909236 None:intergenic
CAGAAGCTTAAGACACAGGA+AGG 0.591686 7_3:+79908366 None:intergenic
GATGCTTGGGATCTCCATAA+CGG 0.593120 7_3:+79909265 None:intergenic
ATTAAGATCGGAGATAAGAT+CGG 0.593203 7_3:-79911708 Msa1128110:five_prime_UTR
ACGAGTGGTGTCACCGTAGG+CGG 0.595030 7_3:+79911498 None:intergenic
TGCTCAGACACAGCAACAGG+GGG 0.595588 7_3:-79910156 Msa1128110:CDS
CAGCACGCGCTTTCTAGCAC+CGG 0.596449 7_3:-79911460 Msa1128110:CDS
GAGTTGTTGTGTATCACCAC+TGG 0.599166 7_3:+79910235 None:intergenic
AGATAAGATCAGATGGGCGG+AGG 0.599612 7_3:-79911685 Msa1128110:exon
CCTCATTCGCAGTTGATGGA+GGG 0.600072 7_3:+79910367 None:intergenic
ACTTGTATAGTTTCAGAAGA+CGG 0.600079 7_3:+79910194 None:intergenic
AAACCTTCTGAATATGTACA+AGG 0.601145 7_3:-79909372 Msa1128110:CDS
CCCAGAACAGCATGTCGACA+AGG 0.601862 7_3:+79910453 None:intergenic
GCTTAGTTAACTATATATGG+TGG 0.605010 7_3:+79911913 None:intergenic
TCACTTAATCATGTTCCCGC+CGG 0.605523 7_3:-79911433 Msa1128110:intron
GGTTTGACTCAGGAAGAGTA+AGG 0.605762 7_3:+79908772 None:intergenic
ATGTTAAACAAACAGCTCCA+AGG 0.606915 7_3:+79908188 None:intergenic
GCTATCTGGACACAATTACA+AGG 0.607116 7_3:-79907981 Msa1128110:three_prime_UTR
GATCCCCACTTACCATTAGA+GGG 0.607911 7_3:+79909408 None:intergenic
CACTCCGTTGCGGAACAGTG+CGG 0.607972 7_3:+79909589 None:intergenic
AAGTGTGTAAATCCCTTAGG+TGG 0.612305 7_3:-79909132 Msa1128110:CDS
TGCTATGGAGCAGCAGATGG+TGG 0.612792 7_3:-79909211 Msa1128110:CDS
AAGTTTCAAATGTTGCAGGA+AGG 0.613758 7_3:-79908082 Msa1128110:three_prime_UTR
TCACCATGTTCAATATCTGA+AGG 0.616291 7_3:+79908847 None:intergenic
CTTGTTCGTATGAACTATTG+TGG 0.616869 7_3:-79911535 Msa1128110:CDS
TGAGCAGAAGCTTAAGACAC+AGG 0.619652 7_3:+79908362 None:intergenic
TCCGTTGCGGAACAGTGCGG+GGG 0.622717 7_3:+79909592 None:intergenic
TCATGGTAATGATATTGCAA+AGG 0.626813 7_3:-79907483 Msa1128110:three_prime_UTR
CCCATTGCTGTCGAGTGTGT+AGG 0.626853 7_3:+79909444 None:intergenic
TCAGGAAGAGTAAGGATGAG+TGG 0.633719 7_3:+79908780 None:intergenic
CGACGGCGAAGATATCGGTA+TGG 0.634124 7_3:-79911630 Msa1128110:CDS
AGCAATAATGGTAATCAACA+AGG 0.635068 7_3:-79909876 Msa1128110:CDS
CTGCTCAGACACAGCAACAG+GGG 0.637667 7_3:-79910157 Msa1128110:CDS
TATTGCCGATCTACCAGCAG+GGG 0.638854 7_3:+79909053 None:intergenic
ATATTCTGCGCAATTGCATG+TGG 0.639515 7_3:+79911568 None:intergenic
TGAGTCAAACCCCGATTCAG+GGG 0.644565 7_3:-79908760 Msa1128110:CDS
GAGTGCTATGGAGCAGCAGA+TGG 0.644619 7_3:-79909214 Msa1128110:CDS
TAAACAAACAGCTCCAAGGT+TGG 0.647216 7_3:+79908192 None:intergenic
AATTCAAATGTTCAAAACGG+AGG 0.648741 7_3:-79910107 Msa1128110:CDS
GCTGCTCAGACACAGCAACA+GGG 0.650440 7_3:-79910158 Msa1128110:CDS
AATGTAAACAATTATCGACC+TGG 0.651786 7_3:-79909972 Msa1128110:CDS
TCCATCAACTGCGAATGAGG+AGG 0.652227 7_3:-79910364 Msa1128110:CDS
GATCGGAGATAAGATCAGAT+GGG 0.656287 7_3:-79911691 Msa1128110:exon
ACCACTCAAGGCTATCCACA+TGG 0.657824 7_3:-79909480 Msa1128110:CDS
AGCGCGTGCTGTACAGACGC+AGG 0.658760 7_3:+79911472 None:intergenic
GTGCATAGCAGTACCACTCA+AGG 0.659605 7_3:-79909492 Msa1128110:CDS
GTATCACCACTGGTTAGTGG+AGG 0.662670 7_3:+79910245 None:intergenic
GGTTTGGATTGAGAGACTTG+AGG 0.663612 7_3:+79912080 None:intergenic
CAGAAGTCACCCCTGAATCG+GGG 0.665735 7_3:+79908751 None:intergenic
CGCGGAGGCGCAGTATACGA+CGG 0.668480 7_3:-79911647 Msa1128110:CDS
TATACGAGTGGTGTCACCGT+AGG 0.671792 7_3:+79911495 None:intergenic
CGGAGATAAGATCAGATGGG+CGG 0.673527 7_3:-79911688 Msa1128110:exon
TGTCCTTCAGATATTGAACA+TGG 0.677199 7_3:-79908850 Msa1128110:CDS
TTATTGCCGATCTACCAGCA+GGG 0.679539 7_3:+79909052 None:intergenic
GAAATCATCAAAATCAACAG+GGG 0.679631 7_3:-79909833 Msa1128110:CDS
GTTATCTTGAAGTCCAACTG+GGG 0.686988 7_3:+79910001 None:intergenic
AGGTGGAGCGACAACTAACG+CGG 0.688181 7_3:-79911665 Msa1128110:CDS
GGAGGACCTCCACTAACCAG+TGG 0.691674 7_3:-79910251 Msa1128110:CDS
AGTGAAAACTGGTAATGACA+AGG 0.692144 7_3:+79907548 None:intergenic
GGAAATCATCAAAATCAACA+GGG 0.697219 7_3:-79909834 Msa1128110:CDS
GGTTGATATTCTGGACCATG+TGG 0.700176 7_3:+79909465 None:intergenic
TTATCTTGAAGTCCAACTGG+GGG 0.703666 7_3:+79910002 None:intergenic
TACAGACGCAGGTATACGAG+TGG 0.706607 7_3:+79911483 None:intergenic
GAATTACTAGGTGCAAAAGG+AGG 0.707826 7_3:+79909756 None:intergenic
TGGAGCGACAACTAACGCGG+AGG 0.712925 7_3:-79911662 Msa1128110:CDS
TTGTTGCCAACAGTCCTAGG+TGG 0.727786 7_3:+79909693 None:intergenic
GGAAATCATCAAAATCAACA+GGG 0.731421 7_3:-79909855 Msa1128110:CDS
GCTCAGACACAGCAACAGGG+GGG 0.746430 7_3:-79910155 Msa1128110:CDS
ACCATGTGGATAGCCTTGAG+TGG 0.749894 7_3:+79909479 None:intergenic
ATCCACTGTGATGTATAACG+GGG 0.757583 7_3:+79908408 None:intergenic
TGCCCCGTTATACATCACAG+TGG 0.779311 7_3:-79908410 Msa1128110:three_prime_UTR
CAGCAACAAGAAATGCAACG+GGG 0.785002 7_3:+79907877 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATACTTATATAGATAAAATT+AGG - chr7_3:79907804-79907823 Msa1128110:three_prime_UTR 10.0%
!! GATAATTGTTTACATTATTA+CGG + chr7_3:79909593-79909612 None:intergenic 15.0%
!!! ATGAATATAGTCTATTTTAT+TGG + chr7_3:79910593-79910612 None:intergenic 15.0%
!!! ATGAATTATCCATTTTTTAT+GGG + chr7_3:79910751-79910770 None:intergenic 15.0%
!! TATCAAATATATCACTAAAA+CGG + chr7_3:79911302-79911321 None:intergenic 15.0%
!! AGCAAATGTAAATTTAAATA+CGG + chr7_3:79911876-79911895 None:intergenic 15.0%
!! ATTTAAATTTACATTTGCTT+TGG - chr7_3:79911877-79911896 Msa1128110:five_prime_UTR 15.0%
!! TTTGCTTAGTTAACTATATA+TGG + chr7_3:79907662-79907681 None:intergenic 20.0%
!!! TTGAATTTTTTCTCAGTATA+AGG - chr7_3:79908393-79908412 Msa1128110:three_prime_UTR 20.0%
!!! TGCGAATTATTTATTGATTT+CGG - chr7_3:79909158-79909177 Msa1128110:CDS 20.0%
!!! GATGAATTATCCATTTTTTA+TGG + chr7_3:79910752-79910771 None:intergenic 20.0%
!!! AGTATAACAAGTATCTTTTT+TGG - chr7_3:79911012-79911031 Msa1128110:intron 20.0%
!! TATGATGTTGAATAATTATC+CGG - chr7_3:79911731-79911750 Msa1128110:five_prime_UTR 20.0%
!!! ATTTTCATCTTTCTTTGTAT+TGG - chr7_3:79911929-79911948 Msa1128110:five_prime_UTR 20.0%
! AACATGATTAAGTGAAATTC+CGG + chr7_3:79908131-79908150 None:intergenic 25.0%
!! TTCATTTCTGTGATTGATTT+GGG - chr7_3:79908283-79908302 Msa1128110:three_prime_UTR 25.0%
!!! ATGGTTTTAAATTGTGATTG+CGG - chr7_3:79908432-79908451 Msa1128110:three_prime_UTR 25.0%
!!! ATTTTATTTATCACGTGATG+CGG - chr7_3:79908603-79908622 Msa1128110:three_prime_UTR 25.0%
!! GGTATTAAAAATCTGATTTG+TGG - chr7_3:79908649-79908668 Msa1128110:three_prime_UTR 25.0%
! TTATCAAAATTACACCTCAA+AGG + chr7_3:79908817-79908836 None:intergenic 25.0%
!!! GAGGTGTAATTTTGATAATT+TGG - chr7_3:79908819-79908838 Msa1128110:CDS 25.0%
!! TGTTGATTGAAAGATAGATT+TGG - chr7_3:79908894-79908913 Msa1128110:CDS 25.0%
! TGTTGAACAGTTAATACATT+TGG - chr7_3:79908957-79908976 Msa1128110:intron 25.0%
!!! AATTTCACACTATTGATTTG+TGG + chr7_3:79909016-79909035 None:intergenic 25.0%
!!! GTGTGAAATTTTGATACATT+TGG - chr7_3:79909026-79909045 Msa1128110:intron 25.0%
!!! CTTTTTTCATGTTTGGTTAT+AGG - chr7_3:79909066-79909085 Msa1128110:CDS 25.0%
! GAAATCAATAAATAATTCGC+AGG + chr7_3:79909159-79909178 None:intergenic 25.0%
!!! GCGAATTATTTATTGATTTC+GGG - chr7_3:79909159-79909178 Msa1128110:CDS 25.0%
! GGAAATTCAAATGTTCAAAA+CGG - chr7_3:79909459-79909478 Msa1128110:CDS 25.0%
! TTTGGAGAATATGAATTACT+AGG + chr7_3:79909828-79909847 None:intergenic 25.0%
! AATAATAAACTTCCCTCTAA+TGG - chr7_3:79910149-79910168 Msa1128110:CDS 25.0%
! ATGGTGGTAAAACAAAATTT+AGG - chr7_3:79910374-79910393 Msa1128110:CDS 25.0%
!!! TGAATCTATTCTATTTCTGT+AGG - chr7_3:79910640-79910659 Msa1128110:intron 25.0%
!!! TGTTTTAAAGATCTTGCTTT+GGG - chr7_3:79910693-79910712 Msa1128110:intron 25.0%
!!! TTACTTTTATGAGTTTTCTC+TGG + chr7_3:79910890-79910909 None:intergenic 25.0%
! AGAATCATTCGAATAATTAC+TGG + chr7_3:79910938-79910957 None:intergenic 25.0%
!! TGTAGTATTTGGTATTTTTC+GGG + chr7_3:79911110-79911129 None:intergenic 25.0%
!! CTGTAGTATTTGGTATTTTT+CGG + chr7_3:79911111-79911130 None:intergenic 25.0%
! AAATACCAAATACTACAGTT+TGG - chr7_3:79911113-79911132 Msa1128110:intron 25.0%
!! CTACAAATATACATTTTGCT+CGG - chr7_3:79911242-79911261 Msa1128110:intron 25.0%
!! TACAAATATACATTTTGCTC+GGG - chr7_3:79911243-79911262 Msa1128110:intron 25.0%
! ATATTTCCTTCAATCTATCT+TGG - chr7_3:79911351-79911370 Msa1128110:intron 25.0%
! ACAAGGTATGTTTATTATGA+TGG - chr7_3:79911605-79911624 Msa1128110:CDS 25.0%
!! GTTTTCAACATGATTCAAAA+TGG - chr7_3:79911657-79911676 Msa1128110:CDS 25.0%
! CTAAATTCTTCATTGTATCA+TGG - chr7_3:79912069-79912088 Msa1128110:five_prime_UTR 25.0%
GTGAATGAAAGATATGTACT+TGG + chr7_3:79907587-79907606 None:intergenic 30.0%
! GGTTTTTATGGCTATCATTT+TGG + chr7_3:79907609-79907628 None:intergenic 30.0%
!! TACACAAGATTCGGTTTTTA+TGG + chr7_3:79907621-79907640 None:intergenic 30.0%
GCTTAGTTAACTATATATGG+TGG + chr7_3:79907659-79907678 None:intergenic 30.0%
ATAGAGTCAAAGCATAGTAA+AGG + chr7_3:79907711-79907730 None:intergenic 30.0%
! TTAGTTTGAATCGATCTTTG+TGG - chr7_3:79907837-79907856 Msa1128110:three_prime_UTR 30.0%
GATCTTTGTGGAATTAAGAT+CGG - chr7_3:79907849-79907868 Msa1128110:three_prime_UTR 30.0%
ATTAAGATCGGAGATAAGAT+CGG - chr7_3:79907861-79907880 Msa1128110:three_prime_UTR 30.0%
AGCTATGATTTATGAACTGT+CGG - chr7_3:79908204-79908223 Msa1128110:three_prime_UTR 30.0%
GTTCATTTCTGTGATTGATT+TGG - chr7_3:79908282-79908301 Msa1128110:three_prime_UTR 30.0%
!!! ATTGATTTGGGTATTTTACG+CGG - chr7_3:79908295-79908314 Msa1128110:three_prime_UTR 30.0%
ACTTGTATAGTTTCAGAAGA+CGG + chr7_3:79909378-79909397 None:intergenic 30.0%
AATTCAAATGTTCAAAACGG+AGG - chr7_3:79909462-79909481 Msa1128110:CDS 30.0%
GGATTTGATTCTAGATATCA+GGG - chr7_3:79909489-79909508 Msa1128110:CDS 30.0%
AATGTAAACAATTATCGACC+TGG - chr7_3:79909597-79909616 Msa1128110:CDS 30.0%
TTACCATTATTGCTCCATAA+TGG + chr7_3:79909687-79909706 None:intergenic 30.0%
AGCAATAATGGTAATCAACA+AGG - chr7_3:79909693-79909712 Msa1128110:CDS 30.0%
AGGAAATCATCAAAATCAAC+AGG - chr7_3:79909713-79909732 Msa1128110:CDS 30.0%
GGAAATCATCAAAATCAACA+GGG - chr7_3:79909714-79909733 Msa1128110:CDS 30.0%
GGAAATCATCAAAATCAACA+GGG - chr7_3:79909714-79909733 Msa1128110:CDS 30.0%
GAAATCATCAAAATCAACAG+GGG - chr7_3:79909715-79909734 Msa1128110:CDS 30.0%
TATGAATTACTAGGTGCAAA+AGG + chr7_3:79909819-79909838 None:intergenic 30.0%
ATATCTGGTTATCCCAATAA+TGG - chr7_3:79909948-79909967 Msa1128110:CDS 30.0%
AGATCAACGAATGAACAAAA+TGG - chr7_3:79910047-79910066 Msa1128110:CDS 30.0%
GAATGAACAAAATGGACATA+TGG - chr7_3:79910055-79910074 Msa1128110:CDS 30.0%
TGTACATATTCAGAAGGTTT+AGG + chr7_3:79910197-79910216 None:intergenic 30.0%
AAACCTTCTGAATATGTACA+AGG - chr7_3:79910197-79910216 Msa1128110:CDS 30.0%
CAAGTAAAACAACACCTATA+AGG + chr7_3:79910223-79910242 None:intergenic 30.0%
TCAGTTATATTCTTCTCAGT+TGG + chr7_3:79910278-79910297 None:intergenic 30.0%
AATTTCGTCCCAAATTTCTT+TGG + chr7_3:79910480-79910499 None:intergenic 30.0%
AGAATAGATTCATCAGAATG+CGG + chr7_3:79910632-79910651 None:intergenic 30.0%
!!! GTGTTTTAAAGATCTTGCTT+TGG - chr7_3:79910692-79910711 Msa1128110:intron 30.0%
TGGTGATAACCCATAAAAAA+TGG - chr7_3:79910739-79910758 Msa1128110:intron 30.0%
AGTTTCCATTACCATAATCA+GGG + chr7_3:79910857-79910876 None:intergenic 30.0%
AAGTTTCCATTACCATAATC+AGG + chr7_3:79910858-79910877 None:intergenic 30.0%
!! TATGGTAATGGAAACTTGAA+AGG - chr7_3:79910861-79910880 Msa1128110:intron 30.0%
TCTCGTATGAATCAAACTAT+AGG - chr7_3:79910964-79910983 Msa1128110:intron 30.0%
CGAGCAAAATGTATATTTGT+AGG + chr7_3:79911244-79911263 None:intergenic 30.0%
! ACAAATATACATTTTGCTCG+GGG - chr7_3:79911244-79911263 Msa1128110:intron 30.0%
TTTCAGGGTGTATTGTAAAA+TGG - chr7_3:79911428-79911447 Msa1128110:intron 30.0%
CACTTAAAATTGCACAAGAT+TGG - chr7_3:79911529-79911548 Msa1128110:CDS 30.0%
!! CAAACTCTTAATTTGCTATC+TGG - chr7_3:79911574-79911593 Msa1128110:CDS 30.0%
ATTCAACATCATAACTCTGT+AGG + chr7_3:79911724-79911743 None:intergenic 30.0%
! TTTTTAGATGTACTCAGAAC+TGG - chr7_3:79911959-79911978 Msa1128110:five_prime_UTR 30.0%
! TAGCGATCAATTTGTTTGAT+CGG - chr7_3:79911984-79912003 Msa1128110:five_prime_UTR 30.0%
CAACAAATACAAGTGAAAAC+TGG + chr7_3:79912035-79912054 None:intergenic 30.0%
! TCATGGTAATGATATTGCAA+AGG - chr7_3:79912086-79912105 Msa1128110:five_prime_UTR 30.0%
TTTCTTCTTGCGTATTGCAT+GGG + chr7_3:79907513-79907532 None:intergenic 35.0%
! TTTTCTTCTTGCGTATTGCA+TGG + chr7_3:79907514-79907533 None:intergenic 35.0%
ATACGACAGCAATTGGAAAA+AGG - chr7_3:79907547-79907566 Msa1128110:three_prime_UTR 35.0%
TACGACAGCAATTGGAAAAA+GGG - chr7_3:79907548-79907567 Msa1128110:three_prime_UTR 35.0%
TGAAGAGACTACACAAGATT+CGG + chr7_3:79907630-79907649 None:intergenic 35.0%
!!! AGAGATTGAGGGTTTTGTTT+TGG + chr7_3:79907685-79907704 None:intergenic 35.0%
AGTAAAGGTGAAGAGATTGA+GGG + chr7_3:79907696-79907715 None:intergenic 35.0%
TAGTAAAGGTGAAGAGATTG+AGG + chr7_3:79907697-79907716 None:intergenic 35.0%
GAAAACTGTCATGTTCCTAA+AGG - chr7_3:79907971-79907990 Msa1128110:three_prime_UTR 35.0%
CTTGTTCGTATGAACTATTG+TGG - chr7_3:79908034-79908053 Msa1128110:three_prime_UTR 35.0%
AATCGAAGTAAGTTCGTTAC+CGG + chr7_3:79908158-79908177 None:intergenic 35.0%
!! AGGTGATTTGATTTGAAGCA+TGG - chr7_3:79908413-79908432 Msa1128110:three_prime_UTR 35.0%
TATTGTGATAGCTGATACTG+TGG - chr7_3:79908471-79908490 Msa1128110:three_prime_UTR 35.0%
ATTATAGCCCTGACTTATTG+CGG - chr7_3:79908547-79908566 Msa1128110:three_prime_UTR 35.0%
TGTGTATTGCTGTAATTTCG+TGG - chr7_3:79908579-79908598 Msa1128110:three_prime_UTR 35.0%
GTGTATTGCTGTAATTTCGT+GGG - chr7_3:79908580-79908599 Msa1128110:three_prime_UTR 35.0%
TGGTTCACTTGAAACATTCA+CGG - chr7_3:79908914-79908933 Msa1128110:intron 35.0%
!! AAACATTCACGGTTGATTTG+TGG - chr7_3:79908925-79908944 Msa1128110:intron 35.0%
!!! GCTGAAGCTTTTTTCATGTT+TGG - chr7_3:79909059-79909078 Msa1128110:CDS 35.0%
ATAAATAATTCGCAGGTGCA+GGG + chr7_3:79909152-79909171 None:intergenic 35.0%
AATAAATAATTCGCAGGTGC+AGG + chr7_3:79909153-79909172 None:intergenic 35.0%
CCAGCATGAATTTCAGAATA+GGG + chr7_3:79909441-79909460 None:intergenic 35.0%
TCCAGCATGAATTTCAGAAT+AGG + chr7_3:79909442-79909461 None:intergenic 35.0%
AAATGTTCAAAACGGAGGAA+GGG - chr7_3:79909467-79909486 Msa1128110:CDS 35.0%
GGGATTTGATTCTAGATATC+AGG - chr7_3:79909488-79909507 Msa1128110:CDS 35.0%
ACATTTGGATTATAGTTGCC+AGG + chr7_3:79909618-79909637 None:intergenic 35.0%
AATCCAAATGTTCCTCAAAG+TGG - chr7_3:79909627-79909646 Msa1128110:CDS 35.0%
GATCCATTATGGAGCAATAA+TGG - chr7_3:79909681-79909700 Msa1128110:CDS 35.0%
GGGAAATCATCAAAATCAAC+AGG - chr7_3:79909734-79909753 Msa1128110:CDS 35.0%
! GTTGCAAAAGTATGGGAATT+TGG + chr7_3:79909846-79909865 None:intergenic 35.0%
ATGTTCAGATTGCCAATATC+TGG + chr7_3:79909930-79909949 None:intergenic 35.0%
ATTGGCAATCTGAACATATC+TGG - chr7_3:79909933-79909952 Msa1128110:CDS 35.0%
TGTTCATTCGTTGATCTTAC+CGG + chr7_3:79910044-79910063 None:intergenic 35.0%
! GAATATGTACAAGGCCTTAT+AGG - chr7_3:79910206-79910225 Msa1128110:CDS 35.0%
!!! GGCATTTTTTAGTGAGTTCA+GGG + chr7_3:79910246-79910265 None:intergenic 35.0%
!!! TGGCATTTTTTAGTGAGTTC+AGG + chr7_3:79910247-79910266 None:intergenic 35.0%
ATAACTGATAGCATCCGTTA+TGG - chr7_3:79910290-79910309 Msa1128110:CDS 35.0%
TTGGTAAGAATGACAAACTC+TGG - chr7_3:79910414-79910433 Msa1128110:CDS 35.0%
! TGTTTAGGATTTCCACCTAA+GGG + chr7_3:79910452-79910471 None:intergenic 35.0%
!! ATTTCTTTGGAGTGCTGTTT+AGG + chr7_3:79910467-79910486 None:intergenic 35.0%
AACAGCACTCCAAAGAAATT+TGG - chr7_3:79910468-79910487 Msa1128110:CDS 35.0%
ACAGCACTCCAAAGAAATTT+GGG - chr7_3:79910469-79910488 Msa1128110:CDS 35.0%
AATAGATTCATCAGAATGCG+GGG + chr7_3:79910630-79910649 None:intergenic 35.0%
GAATAGATTCATCAGAATGC+GGG + chr7_3:79910631-79910650 None:intergenic 35.0%
! TATTTCTGTAGGTATGAAGC+AGG - chr7_3:79910651-79910670 Msa1128110:intron 35.0%
TGTCCTTCAGATATTGAACA+TGG - chr7_3:79910719-79910738 Msa1128110:intron 35.0%
TCACCATGTTCAATATCTGA+AGG + chr7_3:79910725-79910744 None:intergenic 35.0%
CCATACCAAACTGTAGTATT+TGG + chr7_3:79911121-79911140 None:intergenic 35.0%
CCAAATACTACAGTTTGGTA+TGG - chr7_3:79911118-79911137 Msa1128110:intron 35.0%
AGATCCACTGTGATGTATAA+CGG + chr7_3:79911166-79911185 None:intergenic 35.0%
AGGAAATATCTCGACACATT+TGG + chr7_3:79911340-79911359 None:intergenic 35.0%
ATGTTAAACAAACAGCTCCA+AGG + chr7_3:79911384-79911403 None:intergenic 35.0%
! TCTACCAAGTCAGATTTTTC+AGG - chr7_3:79911412-79911431 Msa1128110:intron 35.0%
! CTACCAAGTCAGATTTTTCA+GGG - chr7_3:79911413-79911432 Msa1128110:intron 35.0%
AGCGTCAAATGAACAAATTC+TGG + chr7_3:79911458-79911477 None:intergenic 35.0%
TTCGAAGTTTCAAATGTTGC+AGG - chr7_3:79911483-79911502 Msa1128110:CDS 35.0%
AAGTTTCAAATGTTGCAGGA+AGG - chr7_3:79911487-79911506 Msa1128110:CDS 35.0%
ATCAGCAACAAGAAATGCAA+CGG + chr7_3:79911697-79911716 None:intergenic 35.0%
! TTATCCGGAAATACAGCTTT+TGG - chr7_3:79911746-79911765 Msa1128110:five_prime_UTR 35.0%
ACATCCAAAAGCTGTATTTC+CGG + chr7_3:79911753-79911772 None:intergenic 35.0%
! AAATACAGCTTTTGGATGTC+TGG - chr7_3:79911754-79911773 Msa1128110:five_prime_UTR 35.0%
!! CTGGCTCTATATACTGAATT+TGG - chr7_3:79911773-79911792 Msa1128110:five_prime_UTR 35.0%
! AGTGAAAACTGGTAATGACA+AGG + chr7_3:79912024-79912043 None:intergenic 35.0%
CAATTGCTGTCGTATGCAAT+GGG + chr7_3:79907542-79907561 None:intergenic 40.0%
AGATCGGAGATAAGATCAGA+TGG - chr7_3:79907877-79907896 Msa1128110:three_prime_UTR 40.0%
GATCGGAGATAAGATCAGAT+GGG - chr7_3:79907878-79907897 Msa1128110:three_prime_UTR 40.0%
ATATTCTGCGCAATTGCATG+TGG + chr7_3:79908004-79908023 None:intergenic 40.0%
CGCAGTTTGTACTGTCTATA+TGG - chr7_3:79908628-79908647 Msa1128110:three_prime_UTR 40.0%
!! CCCTATTCTGAAATTCATGC+TGG - chr7_3:79909438-79909457 Msa1128110:CDS 40.0%
CAAATGTTCAAAACGGAGGA+AGG - chr7_3:79909466-79909485 Msa1128110:CDS 40.0%
AATGTTCAAAACGGAGGAAG+GGG - chr7_3:79909468-79909487 Msa1128110:CDS 40.0%
TTATCTTGAAGTCCAACTGG+GGG + chr7_3:79909570-79909589 None:intergenic 40.0%
GTTATCTTGAAGTCCAACTG+GGG + chr7_3:79909571-79909590 None:intergenic 40.0%
GGTTATCTTGAAGTCCAACT+GGG + chr7_3:79909572-79909591 None:intergenic 40.0%
! GATCCACTTTGAGGAACATT+TGG + chr7_3:79909633-79909652 None:intergenic 40.0%
TTTGTGGTTGATCCACTTTG+AGG + chr7_3:79909642-79909661 None:intergenic 40.0%
!! GCTCCATAATGGATCAGAAT+TGG + chr7_3:79909676-79909695 None:intergenic 40.0%
!! GGAAAACCGTTTGGTCTTAA+TGG + chr7_3:79909786-79909805 None:intergenic 40.0%
GAATTACTAGGTGCAAAAGG+AGG + chr7_3:79909816-79909835 None:intergenic 40.0%
! CGGTGTAGTTGCAAAAGTAT+GGG + chr7_3:79909853-79909872 None:intergenic 40.0%
! CCATACTTTTGCAACTACAC+CGG - chr7_3:79909851-79909870 Msa1128110:CDS 40.0%
AAATTGTTGCCAACAGTCCT+AGG + chr7_3:79909882-79909901 None:intergenic 40.0%
GTTGGCAACAATTTCAGTAC+AGG - chr7_3:79909888-79909907 Msa1128110:CDS 40.0%
!! GAGTGTGTAGGTTGATATTC+TGG + chr7_3:79910116-79910135 None:intergenic 40.0%
AACTTCCCTCTAATGGTAAG+TGG - chr7_3:79910156-79910175 Msa1128110:CDS 40.0%
ACTTCCCTCTAATGGTAAGT+GGG - chr7_3:79910157-79910176 Msa1128110:CDS 40.0%
! AGGCCTTGTACATATTCAGA+AGG + chr7_3:79910203-79910222 None:intergenic 40.0%
CTCCAGAGCTTTCTTAACAT+CGG + chr7_3:79910336-79910355 None:intergenic 40.0%
! TGGAAGTGTGTAAATCCCTT+AGG - chr7_3:79910434-79910453 Msa1128110:CDS 40.0%
AAGTGTGTAAATCCCTTAGG+TGG - chr7_3:79910437-79910456 Msa1128110:CDS 40.0%
! CTGTTTAGGATTTCCACCTA+AGG + chr7_3:79910453-79910472 None:intergenic 40.0%
! AATTTTCTAACAACCCCTGC+TGG - chr7_3:79910503-79910522 Msa1128110:intron 40.0%
! AGAATGCGGGGATATCTTTT+AGG + chr7_3:79910618-79910637 None:intergenic 40.0%
TGGATAATTCATCAGCAGTC+TGG - chr7_3:79910759-79910778 Msa1128110:intron 40.0%
TGAATATATCACCAGCCAGT+TGG - chr7_3:79910911-79910930 Msa1128110:intron 40.0%
CGAATAATTACTGGTCCAAC+TGG + chr7_3:79910929-79910948 None:intergenic 40.0%
AATTCGTCGTCGGAGATAAA+TGG - chr7_3:79911051-79911070 Msa1128110:intron 40.0%
ATCCACTGTGATGTATAACG+GGG + chr7_3:79911164-79911183 None:intergenic 40.0%
GATCCACTGTGATGTATAAC+GGG + chr7_3:79911165-79911184 None:intergenic 40.0%
ACATCACAGTGGATCTATCT+TGG - chr7_3:79911170-79911189 Msa1128110:intron 40.0%
GGAGTTCTTCCTTATTAGAC+TGG - chr7_3:79911265-79911284 Msa1128110:intron 40.0%
CCAAGTAGTCCAGTCTAATA+AGG + chr7_3:79911277-79911296 None:intergenic 40.0%
CCTTATTAGACTGGACTACT+TGG - chr7_3:79911274-79911293 Msa1128110:intron 40.0%
TGGTCACCAAGATAGATTGA+AGG + chr7_3:79911360-79911379 None:intergenic 40.0%
TAAACAAACAGCTCCAAGGT+TGG + chr7_3:79911380-79911399 None:intergenic 40.0%
ACACCCTGAAAAATCTGACT+TGG + chr7_3:79911419-79911438 None:intergenic 40.0%
GCTATCTGGACACAATTACA+AGG - chr7_3:79911588-79911607 Msa1128110:CDS 40.0%
TCAGCAACAAGAAATGCAAC+GGG + chr7_3:79911696-79911715 None:intergenic 40.0%
GTTGCATTTCTTGTTGCTGA+TGG - chr7_3:79911696-79911715 Msa1128110:five_prime_UTR 40.0%
! TTGGTGATTTAGTCGCGAAT+TGG - chr7_3:79911792-79911811 Msa1128110:five_prime_UTR 40.0%
CTATTGCCTCTTAATGTCAG+TGG - chr7_3:79911834-79911853 Msa1128110:five_prime_UTR 40.0%
TTGAGGTGGAGAGTAGTGTT+TGG + chr7_3:79907475-79907494 None:intergenic 45.0%
TTGGATTGAGAGACTTGAGG+TGG + chr7_3:79907489-79907508 None:intergenic 45.0%
GGTTTGGATTGAGAGACTTG+AGG + chr7_3:79907492-79907511 None:intergenic 45.0%
TCTTGCGTATTGCATGGGTT+TGG + chr7_3:79907508-79907527 None:intergenic 45.0%
CCAATTGCTGTCGTATGCAA+TGG + chr7_3:79907543-79907562 None:intergenic 45.0%
CCATTGCATACGACAGCAAT+TGG - chr7_3:79907540-79907559 Msa1128110:three_prime_UTR 45.0%
GTATACGACGGCGAAGATAT+CGG - chr7_3:79907934-79907953 Msa1128110:three_prime_UTR 45.0%
TCACTTAATCATGTTCCCGC+CGG - chr7_3:79908136-79908155 Msa1128110:three_prime_UTR 45.0%
TTTGACGAGAATCAGCAACG+TGG - chr7_3:79908338-79908357 Msa1128110:three_prime_UTR 45.0%
!! GATTGCGGTAGAAGTTGATG+TGG - chr7_3:79908447-79908466 Msa1128110:three_prime_UTR 45.0%
GCAAACACCGCAATAAGTCA+GGG + chr7_3:79908557-79908576 None:intergenic 45.0%
TCACTTGTTTGCCTTTCTCG+AGG - chr7_3:79908689-79908708 Msa1128110:three_prime_UTR 45.0%
CTTCCTTTCTTGAGCCTTTG+AGG - chr7_3:79908800-79908819 Msa1128110:CDS 45.0%
ACACCTCAAAGGCTCAAGAA+AGG + chr7_3:79908806-79908825 None:intergenic 45.0%
!! AGTGGTGCAGATGCTTTTTG+AGG + chr7_3:79909252-79909271 None:intergenic 45.0%
! TTGCAGCAGCTAAGAGTGTA+TGG - chr7_3:79909274-79909293 Msa1128110:CDS 45.0%
! CAGCTAAGAGTGTATGGCTT+TGG - chr7_3:79909280-79909299 Msa1128110:CDS 45.0%
CTTTGGACTACTCTCTTAGC+TGG - chr7_3:79909297-79909316 Msa1128110:CDS 45.0%
! TGTGTATCACCACTGGTTAG+TGG + chr7_3:79909330-79909349 None:intergenic 45.0%
GAGTTGTTGTGTATCACCAC+TGG + chr7_3:79909337-79909356 None:intergenic 45.0%
GATATCAGGGTAGACCAACT+TGG - chr7_3:79909502-79909521 Msa1128110:CDS 45.0%
AGAAACCCGAGTCAACCAAA+TGG - chr7_3:79909525-79909544 Msa1128110:CDS 45.0%
TTCGGTCCATTTGGTTGACT+CGG + chr7_3:79909534-79909553 None:intergenic 45.0%
TTCATGGCTTTCGGTCCATT+TGG + chr7_3:79909543-79909562 None:intergenic 45.0%
CGGTTATCTTGAAGTCCAAC+TGG + chr7_3:79909573-79909592 None:intergenic 45.0%
GCGCCAATTCTGATCCATTA+TGG - chr7_3:79909670-79909689 Msa1128110:CDS 45.0%
GGTCTTAATGGCTGGGAATA+TGG + chr7_3:79909774-79909793 None:intergenic 45.0%
TCCCAGCCATTAAGACCAAA+CGG - chr7_3:79909777-79909796 Msa1128110:CDS 45.0%
!! ACCGTTTGGTCTTAATGGCT+GGG + chr7_3:79909781-79909800 None:intergenic 45.0%
!! AACCGTTTGGTCTTAATGGC+TGG + chr7_3:79909782-79909801 None:intergenic 45.0%
GGTTGCAATGGAAAACCGTT+TGG + chr7_3:79909795-79909814 None:intergenic 45.0%
CCGGTGTAGTTGCAAAAGTA+TGG + chr7_3:79909854-79909873 None:intergenic 45.0%
CCAATATCTGGCACAGTTCT+AGG + chr7_3:79909918-79909937 None:intergenic 45.0%
CCTAGAACTGTGCCAGATAT+TGG - chr7_3:79909915-79909934 Msa1128110:CDS 45.0%
CGGGGGTTATGACCATTATT+GGG + chr7_3:79909963-79909982 None:intergenic 45.0%
TTCAAATCTCCACTCCGTTG+CGG + chr7_3:79909993-79910012 None:intergenic 45.0%
! GGAGCACTACTCTTAGGATT+CGG + chr7_3:79910017-79910036 None:intergenic 45.0%
TAAGAGTAGTGCTCCACTTC+CGG - chr7_3:79910022-79910041 Msa1128110:CDS 45.0%
TTCGTTGATCTTACCGGAAG+TGG + chr7_3:79910038-79910057 None:intergenic 45.0%
! GGTTGATATTCTGGACCATG+TGG + chr7_3:79910107-79910126 None:intergenic 45.0%
CTTCCCTCTAATGGTAAGTG+GGG - chr7_3:79910158-79910177 Msa1128110:CDS 45.0%
GATCCCCACTTACCATTAGA+GGG + chr7_3:79910164-79910183 None:intergenic 45.0%
AGATCCCCACTTACCATTAG+AGG + chr7_3:79910165-79910184 None:intergenic 45.0%
AATGGTAAGTGGGGATCTTC+AGG - chr7_3:79910167-79910186 Msa1128110:CDS 45.0%
CTTCTCAGTTGGCATCATCT+TGG + chr7_3:79910267-79910286 None:intergenic 45.0%
GATGCTTGGGATCTCCATAA+CGG + chr7_3:79910307-79910326 None:intergenic 45.0%
CACCGATGTTAAGAAAGCTC+TGG - chr7_3:79910331-79910350 Msa1128110:CDS 45.0%
GGTGCTTTAACGCTGTATGT+TGG - chr7_3:79910395-79910414 Msa1128110:CDS 45.0%
TTATTGCCGATCTACCAGCA+GGG + chr7_3:79910520-79910539 None:intergenic 45.0%
ATTATTGCCGATCTACCAGC+AGG + chr7_3:79910521-79910540 None:intergenic 45.0%
TGCTGGTAGATCGGCAATAA+TGG - chr7_3:79910520-79910539 Msa1128110:intron 45.0%
TAATTCATCAGCAGTCTGGC+TGG - chr7_3:79910763-79910782 Msa1128110:intron 45.0%
TCAGGAAGAGTAAGGATGAG+TGG + chr7_3:79910792-79910811 None:intergenic 45.0%
GGTTTGACTCAGGAAGAGTA+AGG + chr7_3:79910800-79910819 None:intergenic 45.0%
CAGCACCCTGATTATGGTAA+TGG - chr7_3:79910849-79910868 Msa1128110:intron 45.0%
TAATTACTGGTCCAACTGGC+TGG + chr7_3:79910925-79910944 None:intergenic 45.0%
CAATGCCTTCAATTCGTCGT+CGG - chr7_3:79911041-79911060 Msa1128110:intron 45.0%
TATCTCCGACGACGAATTGA+AGG + chr7_3:79911049-79911068 None:intergenic 45.0%
ACAGTTTGGTATGGTTGCTG+AGG - chr7_3:79911127-79911146 Msa1128110:intron 45.0%
CAGAAGCTTAAGACACAGGA+AGG + chr7_3:79911206-79911225 None:intergenic 45.0%
TGAGCAGAAGCTTAAGACAC+AGG + chr7_3:79911210-79911229 None:intergenic 45.0%
! TCTATCTTGGTGACCAACCT+TGG - chr7_3:79911364-79911383 Msa1128110:intron 45.0%
CAGCAACAAGAAATGCAACG+GGG + chr7_3:79911695-79911714 None:intergenic 45.0%
! TTTAGTCGCGAATTGGTCTC+TGG - chr7_3:79911799-79911818 Msa1128110:five_prime_UTR 45.0%
CAGCTACCACTGACATTAAG+AGG + chr7_3:79911843-79911862 None:intergenic 45.0%
TGCTGTCGTATGCAATGGGT+CGG + chr7_3:79907538-79907557 None:intergenic 50.0%
CGGAGATAAGATCAGATGGG+CGG - chr7_3:79907881-79907900 Msa1128110:three_prime_UTR 50.0%
AGATAAGATCAGATGGGCGG+AGG - chr7_3:79907884-79907903 Msa1128110:three_prime_UTR 50.0%
GGCGAAGATATCGGTATGGT+GGG - chr7_3:79907943-79907962 Msa1128110:three_prime_UTR 50.0%
CTGCGCAATTGCATGTGGAT+CGG + chr7_3:79907999-79908018 None:intergenic 50.0%
!! TATACGAGTGGTGTCACCGT+AGG + chr7_3:79908077-79908096 None:intergenic 50.0%
TACAGACGCAGGTATACGAG+TGG + chr7_3:79908089-79908108 None:intergenic 50.0%
GAAGTAAGTTCGTTACCGGC+GGG + chr7_3:79908154-79908173 None:intergenic 50.0%
CGAAGTAAGTTCGTTACCGG+CGG + chr7_3:79908155-79908174 None:intergenic 50.0%
! TGTGTGTTGCTGTGATTGCG+CGG - chr7_3:79908503-79908522 Msa1128110:three_prime_UTR 50.0%
CGCAAACACCGCAATAAGTC+AGG + chr7_3:79908558-79908577 None:intergenic 50.0%
TTGCCTTTCTCGAGGCTTTG+AGG - chr7_3:79908697-79908716 Msa1128110:three_prime_UTR 50.0%
ACACCTCAAAGCCTCGAGAA+AGG + chr7_3:79908703-79908722 None:intergenic 50.0%
TCCTTGTCGACATGCTGTTC+TGG - chr7_3:79909115-79909134 Msa1128110:CDS 50.0%
CCTTGTCGACATGCTGTTCT+GGG - chr7_3:79909116-79909135 Msa1128110:CDS 50.0%
!! CCTCATTCGCAGTTGATGGA+GGG + chr7_3:79909205-79909224 None:intergenic 50.0%
!! TCCTCATTCGCAGTTGATGG+AGG + chr7_3:79909206-79909225 None:intergenic 50.0%
TCCATCAACTGCGAATGAGG+AGG - chr7_3:79909205-79909224 Msa1128110:CDS 50.0%
ACCTCCTCATTCGCAGTTGA+TGG + chr7_3:79909209-79909228 None:intergenic 50.0%
CTCTTAGCTGCTGCAACTAG+TGG + chr7_3:79909270-79909289 None:intergenic 50.0%
TGGACTACTCTCTTAGCTGG+AGG - chr7_3:79909300-79909319 Msa1128110:CDS 50.0%
! GTATCACCACTGGTTAGTGG+AGG + chr7_3:79909327-79909346 None:intergenic 50.0%
! GTCTGAGCAGCATTTGAGAC+AGG + chr7_3:79909402-79909421 None:intergenic 50.0%
! TGACTCGGGTTTCTCCAAGT+TGG + chr7_3:79909519-79909538 None:intergenic 50.0%
! TCGGTCCATTTGGTTGACTC+GGG + chr7_3:79909533-79909552 None:intergenic 50.0%
ATTGGCGCGCTCAAAGTTTG+TGG + chr7_3:79909658-79909677 None:intergenic 50.0%
GGTGCAAAAGGAGGTTGCAA+TGG + chr7_3:79909807-79909826 None:intergenic 50.0%
TTGTTGCCAACAGTCCTAGG+TGG + chr7_3:79909879-79909898 None:intergenic 50.0%
GCGGGGGTTATGACCATTAT+TGG + chr7_3:79909964-79909983 None:intergenic 50.0%
! GGAAGTGGAGCACTACTCTT+AGG + chr7_3:79910023-79910042 None:intergenic 50.0%
GTGCATAGCAGTACCACTCA+AGG - chr7_3:79910077-79910096 Msa1128110:CDS 50.0%
ACCACTCAAGGCTATCCACA+TGG - chr7_3:79910089-79910108 Msa1128110:CDS 50.0%
! ACCATGTGGATAGCCTTGAG+TGG + chr7_3:79910093-79910112 None:intergenic 50.0%
ACCTACACACTCGACAGCAA+TGG - chr7_3:79910124-79910143 Msa1128110:CDS 50.0%
CCTACACACTCGACAGCAAT+GGG - chr7_3:79910125-79910144 Msa1128110:CDS 50.0%
!! ACATCGGTGTTGCGATGCTT+GGG + chr7_3:79910320-79910339 None:intergenic 50.0%
!! AACATCGGTGTTGCGATGCT+TGG + chr7_3:79910321-79910340 None:intergenic 50.0%
!! GAAAGCTCTGGAGAGTGCTA+TGG - chr7_3:79910343-79910362 Msa1128110:CDS 50.0%
AACAACCCCTGCTGGTAGAT+CGG - chr7_3:79910511-79910530 Msa1128110:intron 50.0%
TATTGCCGATCTACCAGCAG+GGG + chr7_3:79910519-79910538 None:intergenic 50.0%
CTGAGTCAAACCCCGATTCA+GGG - chr7_3:79910808-79910827 Msa1128110:intron 50.0%
TGAGTCAAACCCCGATTCAG+GGG - chr7_3:79910809-79910828 Msa1128110:intron 50.0%
TCAGAAGTCACCCCTGAATC+GGG + chr7_3:79910822-79910841 None:intergenic 50.0%
GTCAGAAGTCACCCCTGAAT+CGG + chr7_3:79910823-79910842 None:intergenic 50.0%
GCATAGCAGCACCCTGATTA+TGG - chr7_3:79910843-79910862 Msa1128110:intron 50.0%
TGCCCCGTTATACATCACAG+TGG - chr7_3:79911159-79911178 Msa1128110:intron 50.0%
GCTGTCGTATGCAATGGGTC+GGG + chr7_3:79907537-79907556 None:intergenic 55.0%
TAAGATCAGATGGGCGGAGG+TGG - chr7_3:79907887-79907906 Msa1128110:three_prime_UTR 55.0%
AGGTGGAGCGACAACTAACG+CGG - chr7_3:79907904-79907923 Msa1128110:three_prime_UTR 55.0%
CGACGGCGAAGATATCGGTA+TGG - chr7_3:79907939-79907958 Msa1128110:three_prime_UTR 55.0%
CGGCGAAGATATCGGTATGG+TGG - chr7_3:79907942-79907961 Msa1128110:three_prime_UTR 55.0%
GCATGTGGATCGGAGCCTTT+AGG + chr7_3:79907989-79908008 None:intergenic 55.0%
ACCGTAGGCGGAGATGGAAA+CGG + chr7_3:79908062-79908081 None:intergenic 55.0%
! GTGTGTTGCTGTGATTGCGC+GGG - chr7_3:79908504-79908523 Msa1128110:three_prime_UTR 55.0%
CCCAGAACAGCATGTCGACA+AGG + chr7_3:79909119-79909138 None:intergenic 55.0%
CCCTCCATCAACTGCGAATG+AGG - chr7_3:79909202-79909221 Msa1128110:CDS 55.0%
TGCTGCTCAGACACAGCAAC+AGG - chr7_3:79909410-79909429 Msa1128110:CDS 55.0%
GCTGCTCAGACACAGCAACA+GGG - chr7_3:79909411-79909430 Msa1128110:CDS 55.0%
CTGCTCAGACACAGCAACAG+GGG - chr7_3:79909412-79909431 Msa1128110:CDS 55.0%
TGCTCAGACACAGCAACAGG+GGG - chr7_3:79909413-79909432 Msa1128110:CDS 55.0%
! GGGGGTGGATTCATGGCTTT+CGG + chr7_3:79909552-79909571 None:intergenic 55.0%
! TCCAACTGGGGGTGGATTCA+TGG + chr7_3:79909559-79909578 None:intergenic 55.0%
TCTTGAAGTCCAACTGGGGG+TGG + chr7_3:79909567-79909586 None:intergenic 55.0%
CCCATTGCTGTCGAGTGTGT+AGG + chr7_3:79910128-79910147 None:intergenic 55.0%
GAGTGCTATGGAGCAGCAGA+TGG - chr7_3:79910355-79910374 Msa1128110:CDS 55.0%
TGCTATGGAGCAGCAGATGG+TGG - chr7_3:79910358-79910377 Msa1128110:CDS 55.0%
CCTGAATCGGGGTTTGACTC+AGG + chr7_3:79910810-79910829 None:intergenic 55.0%
CCTGAGTCAAACCCCGATTC+AGG - chr7_3:79910807-79910826 Msa1128110:intron 55.0%
CAGAAGTCACCCCTGAATCG+GGG + chr7_3:79910821-79910840 None:intergenic 55.0%
TGGAGCGACAACTAACGCGG+AGG - chr7_3:79907907-79907926 Msa1128110:three_prime_UTR 60.0%
CCGTAGGCGGAGATGGAAAC+GGG + chr7_3:79908061-79908080 None:intergenic 60.0%
CCCGTTTCCATCTCCGCCTA+CGG - chr7_3:79908058-79908077 Msa1128110:three_prime_UTR 60.0%
!! ACGAGTGGTGTCACCGTAGG+CGG + chr7_3:79908074-79908093 None:intergenic 60.0%
! CAGCACGCGCTTTCTAGCAC+CGG - chr7_3:79908109-79908128 Msa1128110:three_prime_UTR 60.0%
! CGACATGCTGTTCTGGGCAG+TGG - chr7_3:79909122-79909141 Msa1128110:CDS 60.0%
GGAGGACCTCCACTAACCAG+TGG - chr7_3:79909318-79909337 Msa1128110:CDS 60.0%
GCTCAGACACAGCAACAGGG+GGG - chr7_3:79909414-79909433 Msa1128110:CDS 60.0%
GCCATGAATCCACCCCCAGT+TGG - chr7_3:79909555-79909574 Msa1128110:CDS 60.0%
!! CAACTACACCGGTGCCACCT+AGG - chr7_3:79909862-79909881 Msa1128110:CDS 60.0%
CCAACAGTCCTAGGTGGCAC+CGG + chr7_3:79909873-79909892 None:intergenic 60.0%
ACTCCGTTGCGGAACAGTGC+GGG + chr7_3:79909982-79910001 None:intergenic 60.0%
CACTCCGTTGCGGAACAGTG+CGG + chr7_3:79909983-79910002 None:intergenic 60.0%
! CGCGGAGGCGCAGTATACGA+CGG - chr7_3:79907922-79907941 Msa1128110:three_prime_UTR 65.0%
! GGTGTCACCGTAGGCGGAGA+TGG + chr7_3:79908068-79908087 None:intergenic 65.0%
AGCGCGTGCTGTACAGACGC+AGG + chr7_3:79908100-79908119 None:intergenic 65.0%
!! CCGGTGCCACCTAGGACTGT+TGG - chr7_3:79909870-79909889 Msa1128110:CDS 65.0%
ACCCCCGCACTGTTCCGCAA+CGG - chr7_3:79909976-79909995 Msa1128110:CDS 65.0%
TCCGTTGCGGAACAGTGCGG+GGG + chr7_3:79909980-79909999 None:intergenic 65.0%
CTCCGTTGCGGAACAGTGCG+GGG + chr7_3:79909981-79910000 None:intergenic 65.0%
CGCACTGTTCCGCAACGGAG+TGG - chr7_3:79909981-79910000 Msa1128110:CDS 65.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 79907471 79912120 79907471 ID=Msa1128110;Name=Msa1128110
chr7_3 mRNA 79907471 79912120 79907471 ID=Msa1128110-mRNA-1;Parent=Msa1128110;Name=Msa1128110-mRNA-1;_AED=0.01;_eAED=0.01;_QI=425|1|1|1|1|1|3|1272|638
chr7_3 exon 79907471 79908929 79907471 ID=Msa1128110-mRNA-1:exon:22706;Parent=Msa1128110-mRNA-1
chr7_3 exon 79909036 79910503 79909036 ID=Msa1128110-mRNA-1:exon:22705;Parent=Msa1128110-mRNA-1
chr7_3 exon 79911434 79912120 79911434 ID=Msa1128110-mRNA-1:exon:22704;Parent=Msa1128110-mRNA-1
chr7_3 five_prime_UTR 79911696 79912120 79911696 ID=Msa1128110-mRNA-1:five_prime_utr;Parent=Msa1128110-mRNA-1
chr7_3 CDS 79911434 79911695 79911434 ID=Msa1128110-mRNA-1:cds;Parent=Msa1128110-mRNA-1
chr7_3 CDS 79909036 79910503 79909036 ID=Msa1128110-mRNA-1:cds;Parent=Msa1128110-mRNA-1
chr7_3 CDS 79908743 79908929 79908743 ID=Msa1128110-mRNA-1:cds;Parent=Msa1128110-mRNA-1
chr7_3 three_prime_UTR 79907471 79908742 79907471 ID=Msa1128110-mRNA-1:three_prime_utr;Parent=Msa1128110-mRNA-1
Gene Sequence

>Msa1128110

ATGGGCGGAGGTGGAGCGACAACTAACGCGGAGGCGCAGTATACGACGGCGAAGATATCGGTATGGTGGGATATAGAAAACTGTCATGTTCCTAAAGGCTCCGATCCACATGCAATTGCGCAGAATATCAGTTCAGCACTTGTTCGTATGAACTATTGTGGTCCCGTTTCCATCTCCGCCTACGGTGACACCACTCGTATACCTGCGTCTGTACAGCACGCGCTTTCTAGCACCGGAATTTCACTTAATCATGTTCCCGCCGGTGTGAAAGATGCAAGCGATAAGAAAATCCTTGTCGACATGCTGTTCTGGGCAGTGGACAACCCTGCACCTGCGAATTATTTATTGATTTCGGGTGATCGAGATTTTTCTAATGCCCTCCATCAACTGCGAATGAGGAGGTATAATATTCTTCTCGCACAACCTCAAAAAGCATCTGCACCACTAGTTGCAGCAGCTAAGAGTGTATGGCTTTGGACTACTCTCTTAGCTGGAGGACCTCCACTAACCAGTGGTGATACACAACAACTCAGTAATAGTAGCTTCTTACCGTCTTCTGAAACTATACAAGTTCCTGTCTCAAATGCTGCTCAGACACAGCAACAGGGGGGTCCCTATTCTGAAATTCATGCTGGAAATTCAAATGTTCAAAACGGAGGAAGGGGATTTGATTCTAGATATCAGGGTAGACCAACTTGGAGAAACCCGAGTCAACCAAATGGACCGAAAGCCATGAATCCACCCCCAGTTGGACTTCAAGATAACCGTAATAATGTAAACAATTATCGACCTGGCAACTATAATCCAAATGTTCCTCAAAGTGGATCAACCACAAACTTTGAGCGCGCCAATTCTGATCCATTATGGAGCAATAATGGTAATCAACAAGGAAATCATCAAAATCAACAGGGAAATCATCAAAATCAACAGGGGAATCATCAAAATCCATATTCCCAGCCATTAAGACCAAACGGTTTTCCATTGCAACCTCCTTTTGCACCTAGTAATTCATATTCTCCAAATTCCCATACTTTTGCAACTACACCGGTGCCACCTAGGACTGTTGGCAACAATTTCAGTACAGGATCACCTAGAACTGTGCCAGATATTGGCAATCTGAACATATCTGGTTATCCCAATAATGGTCATAACCCCCGCACTGTTCCGCAACGGAGTGGAGATTTGAAACCGAATCCTAAGAGTAGTGCTCCACTTCCGGTAAGATCAACGAATGAACAAAATGGACATATGGTGCATAGCAGTACCACTCAAGGCTATCCACATGGTCCAGAATATCAACCTACACACTCGACAGCAATGGGTAATAATAAACTTCCCTCTAATGGTAAGTGGGGATCTTCAGGTTGTCCTAAACCTTCTGAATATGTACAAGGCCTTATAGGTGTTGTTTTACTTGCCCTGAACTCACTAAAAAATGCCAAGATGATGCCAACTGAGAAGAATATAACTGATAGCATCCGTTATGGAGATCCCAAGCATCGCAACACCGATGTTAAGAAAGCTCTGGAGAGTGCTATGGAGCAGCAGATGGTGGTAAAACAAAATTTAGGTGCTTTAACGCTGTATGTTGGTAAGAATGACAAACTCTGGAAGTGTGTAAATCCCTTAGGTGGAAATCCTAAACAGCACTCCAAAGAAATTTGGGACGAAATTCAAAATTTTCTAACAACCCCTGCTGGTAGATCGGCAATAATGGATACACAGTGCAAGTATGAAGCAGGTATTGTGATAAAGAGCATGTGTTTTAAAGATCTTGCTTTGGGCGATGTCCTTCAGATATTGAACATGGTGATAACCCATAAAAAATGGATAATTCATCAGCAGTCTGGCTGGCAACCACTCATCCTTACTCTTCCTGAGTCAAACCCCGATTCAGGGGTGACTTCTGACGCATAG
Protein sequence

>Msa1128110

MGGGGATTNAEAQYTTAKISVWWDIENCHVPKGSDPHAIAQNISSALVRMNYCGPVSISAYGDTTRIPASVQHALSSTGISLNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPQKASAPLVAAAKSVWLWTTLLAGGPPLTSGDTQQLSNSSFLPSSETIQVPVSNAAQTQQQGGPYSEIHAGNSNVQNGGRGFDSRYQGRPTWRNPSQPNGPKAMNPPPVGLQDNRNNVNNYRPGNYNPNVPQSGSTTNFERANSDPLWSNNGNQQGNHQNQQGNHQNQQGNHQNPYSQPLRPNGFPLQPPFAPSNSYSPNSHTFATTPVPPRTVGNNFSTGSPRTVPDIGNLNISGYPNNGHNPRTVPQRSGDLKPNPKSSAPLPVRSTNEQNGHMVHSSTTQGYPHGPEYQPTHSTAMGNNKLPSNGKWGSSGCPKPSEYVQGLIGVVLLALNSLKNAKMMPTEKNITDSIRYGDPKHRNTDVKKALESAMEQQMVVKQNLGALTLYVGKNDKLWKCVNPLGGNPKQHSKEIWDEIQNFLTTPAGRSAIMDTQCKYEAGIVIKSMCFKDLALGDVLQILNMVITHKKWIIHQQSGWQPLILTLPESNPDSGVTSDA*