AlfalfaGEDB | Msa1398390

M. sativa cultivar zhongmu-4 / Msa1398390

KEGG: K09286
GO: GO:0000160 GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0008150 GO:0009266 GO:0009314 GO:0009409 GO:0009414 GO:0009415 GO:0009416 GO:0009611 GO:0009628 GO:0009651 GO:0009719 GO:0009723 GO:0009725 GO:0009735 GO:0009736 GO:0009755 GO:0009873 GO:0009889 GO:0009987 GO:0010033 GO:0010035 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031326 GO:0032870 GO:0033554 GO:0035556 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0045595 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071214 GO:0071310 GO:0071368 GO:0071369 GO:0071470 GO:0071472 GO:0071495 GO:0080090 GO:0097159 GO:0104004 GO:0140110 GO:1901363 GO:1901700 GO:1903506 GO:2000112 GO:2001141
PFAM: PF00847.23

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1398390	XP_013460867.1	93.003	343	18	3	1	340	1	340	0.0	546

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1398390	sp\|Q8H1E4\|RAP24_ARATH	51.821	357	130	11	1	340	1	332	1.28e-93	285

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1398390	G8A385	93.003	343	18	3	1	340	1	340	0.0	546

TFs/TRs:

Gene ID	Type	Classification
Msa1398390	TF	AP2/ERF-ERF

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0056030	Msa1398390	0.803436	3.489013e-49	-8.615850e-47
Msa1388860	Msa1398390	0.800628	1.318122e-48	-8.615850e-47
Msa1398390	Msa1412890	0.961183	2.087044e-119	-8.615850e-47
Msa1398390	Msa1414690	0.801470	8.870983e-49	-8.615850e-47
Msa1398390	Msa1420290	0.806580	7.678366e-50	-8.615850e-47
Msa1398390	Msa1451270	0.995758	1.413132e-219	-8.615850e-47
Msa0608710	Msa1398390	0.812433	4.249952e-51	-8.615850e-47
Msa0711100	Msa1398390	0.807565	4.749722e-50	-8.615850e-47
Msa0832150	Msa1398390	0.814559	1.448357e-51	-8.615850e-47
Msa1342100	Msa1398390	0.801650	8.146547e-49	-8.615850e-47
Msa0394340	Msa1398390	0.803748	3.006390e-49	-8.615850e-47
Msa0477080	Msa1398390	0.808926	2.436593e-50	-8.615850e-47
Msa0489610	Msa1398390	0.818003	2.458748e-52	-8.615850e-47
Msa0555200	Msa1398390	0.800946	1.135461e-48	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1398390	MtrunA17_Chr3g0115631	93.003	343	18	3	1	340	1	340	0.0	546
Msa1398390	MtrunA17_Chr5g0425561	53.268	306	106	8	50	340	88	371	8.28e-79	245
Msa1398390	MtrunA17_Chr8g0382491	46.087	345	122	13	1	340	1	286	8.04e-69	217
Msa1398390	MtrunA17_Chr1g0196781	43.169	183	84	6	124	292	120	296	6.77e-38	137
Msa1398390	MtrunA17_Chr2g0324131	87.097	62	8	0	147	208	215	276	3.64e-33	127
Msa1398390	MtrunA17_Chr5g0396741	69.231	91	28	0	148	238	115	205	4.24e-28	111
Msa1398390	MtrunA17_Chr7g0221501	75.439	57	14	0	150	206	51	107	2.56e-25	100
Msa1398390	MtrunA17_Chr7g0257911	64.557	79	25	2	150	227	31	107	4.78e-25	102
Msa1398390	MtrunA17_Chr7g0221471	75.439	57	14	0	150	206	51	107	1.07e-24	98.6
Msa1398390	MtrunA17_Chr1g0195151	48.000	125	49	4	90	207	19	134	2.05e-23	98.6
Msa1398390	MtrunA17_Chr1g0150631	62.500	64	24	0	144	207	32	95	4.78e-23	95.9
Msa1398390	MtrunA17_Chr3g0134161	38.129	139	73	4	112	240	9	144	6.44e-23	94.0
Msa1398390	MtrunA17_Chr3g0126321	32.197	264	143	9	73	332	51	282	6.98e-23	97.8
Msa1398390	MtrunA17_Chr1g0150691	62.500	64	24	0	144	207	16	79	1.25e-22	94.4
Msa1398390	MtrunA17_Chr2g0295421	60.563	71	27	1	137	207	84	153	1.43e-22	95.1
Msa1398390	MtrunA17_Chr3g0137174	62.500	64	24	0	143	206	1	64	1.44e-22	93.2
Msa1398390	MtrunA17_Chr1g0150671	33.333	174	89	4	144	313	40	190	1.45e-22	95.5
Msa1398390	MtrunA17_Chr4g0002631	62.500	64	24	0	143	206	1	64	1.56e-22	93.6
Msa1398390	MtrunA17_Chr1g0150661	61.194	67	25	1	142	207	26	92	5.12e-22	92.8
Msa1398390	MtrunA17_Chr4g0044871	66.154	65	18	1	150	210	96	160	5.57e-22	92.8
Msa1398390	MtrunA17_Chr8g0375031	70.690	58	17	0	148	205	123	180	5.97e-22	92.8
Msa1398390	MtrunA17_Chr4g0055761	61.039	77	20	2	131	206	135	202	7.38e-22	93.2
Msa1398390	MtrunA17_Chr4g0023411	68.333	60	19	0	150	209	65	124	8.33e-22	91.7
Msa1398390	MtrunA17_Chr8g0383591	64.516	62	22	0	145	206	140	201	8.76e-22	94.0
Msa1398390	MtrunA17_Chr4g0044911	71.930	57	16	0	150	206	96	152	9.72e-22	92.4
Msa1398390	MtrunA17_Chr4g0046161	56.627	83	32	2	129	207	33	115	1.07e-21	89.0
Msa1398390	MtrunA17_Chr2g0323171	69.492	59	18	0	150	208	65	123	1.10e-21	90.9
Msa1398390	MtrunA17_Chr2g0301191	56.000	75	27	1	139	207	2	76	1.18e-21	91.7
Msa1398390	MtrunA17_Chr5g0437671	67.692	65	21	0	150	214	85	149	2.18e-21	94.4
Msa1398390	MtrunA17_Chr8g0335331	62.319	69	22	2	150	214	125	193	2.52e-21	90.1
Msa1398390	MtrunA17_Chr1g0189941	71.429	56	16	0	150	205	24	79	2.59e-21	89.4
Msa1398390	MtrunA17_Chr5g0396911	68.254	63	20	0	143	205	105	167	3.06e-21	92.4
Msa1398390	MtrunA17_Chr2g0333011	49.462	93	46	1	147	238	4	96	3.25e-21	89.4
Msa1398390	MtrunA17_Chr4g0044901	70.175	57	17	0	150	206	96	152	4.38e-21	90.5
Msa1398390	MtrunA17_Chr4g0044881	70.175	57	17	0	150	206	114	170	6.14e-21	90.1
Msa1398390	MtrunA17_Chr2g0301171	40.800	125	60	4	147	270	16	127	6.17e-21	89.4
Msa1398390	MtrunA17_Chr1g0158971	41.727	139	68	5	78	205	34	170	7.38e-21	92.0
Msa1398390	MtrunA17_Chr2g0316931	67.241	58	19	0	150	207	31	88	9.89e-21	89.0
Msa1398390	MtrunA17_Chr1g0186731	61.111	72	27	1	137	207	8	79	1.01e-20	87.0
Msa1398390	MtrunA17_Chr8g0335311	65.000	60	20	1	150	208	96	155	1.85e-20	87.8
Msa1398390	MtrunA17_Chr7g0250731	67.742	62	19	1	148	208	59	120	1.99e-20	88.2
Msa1398390	MtrunA17_Chr8g0335321	64.516	62	21	1	148	208	94	155	2.12e-20	87.8
Msa1398390	MtrunA17_Chr4g0063751	63.333	60	22	0	147	206	4	63	2.15e-20	88.2
Msa1398390	MtrunA17_Chr2g0283171	55.422	83	24	3	126	206	49	120	2.76e-20	86.3
Msa1398390	MtrunA17_Chr7g0250721	67.742	62	19	1	148	208	59	120	2.81e-20	87.8
Msa1398390	MtrunA17_Chr7g0250711	66.154	65	20	2	146	208	55	119	5.74e-20	86.7
Msa1398390	MtrunA17_Chr8g0344961	64.912	57	20	0	150	206	124	180	5.92e-20	89.7
Msa1398390	MtrunA17_Chr1g0184081	62.687	67	21	2	150	215	21	84	7.25e-20	84.7
Msa1398390	MtrunA17_Chr2g0334031	64.912	57	20	0	150	206	117	173	7.63e-20	89.4
Msa1398390	MtrunA17_Chr4g0003421	63.333	60	22	0	147	206	37	96	8.33e-20	87.0
Msa1398390	MtrunA17_Chr3g0136551	57.576	66	28	0	140	205	55	120	9.32e-20	87.8
Msa1398390	MtrunA17_Chr3g0140161	45.361	97	41	2	149	244	42	127	1.12e-19	85.5
Msa1398390	MtrunA17_Chr2g0282621	61.538	65	25	0	150	214	15	79	1.61e-19	84.7
Msa1398390	MtrunA17_Chr5g0438801	56.579	76	30	1	135	210	39	111	1.63e-19	87.0
Msa1398390	MtrunA17_Chr6g0486701	63.333	60	22	0	149	208	43	102	1.68e-19	85.9
Msa1398390	MtrunA17_Chr5g0437371	71.429	56	16	0	150	205	66	121	1.76e-19	87.8
Msa1398390	MtrunA17_Chr1g0170531	66.667	60	19	1	148	206	87	146	1.84e-19	85.9
Msa1398390	MtrunA17_Chr5g0401871	50.000	84	39	2	137	217	11	94	2.03e-19	84.7
Msa1398390	MtrunA17_Chr7g0275841	61.017	59	23	0	149	207	27	85	2.06e-19	84.3
Msa1398390	MtrunA17_Chr5g0399441	60.317	63	25	0	149	211	27	89	2.10e-19	84.3
Msa1398390	MtrunA17_Chr8g0387801	67.241	58	19	0	148	205	105	162	2.79e-19	87.0
Msa1398390	MtrunA17_Chr1g0186671	61.644	73	20	3	137	207	11	77	2.83e-19	82.8
Msa1398390	MtrunA17_Chr2g0301181	57.377	61	26	0	147	207	16	76	2.92e-19	85.5
Msa1398390	MtrunA17_Chr1g0203861	45.631	103	51	3	107	207	2	101	3.11e-19	84.7
Msa1398390	MtrunA17_Chr7g0232261	62.712	59	22	0	150	208	61	119	4.28e-19	85.1
Msa1398390	MtrunA17_Chr7g0265851	64.407	59	21	0	149	207	23	81	4.42e-19	84.3
Msa1398390	MtrunA17_Chr5g0438831	50.000	88	43	1	123	210	20	106	7.31e-19	85.5
Msa1398390	MtrunA17_Chr2g0331231	54.839	62	28	0	149	210	40	101	9.03e-19	83.6
Msa1398390	MtrunA17_Chr1g0153151	60.656	61	24	0	148	208	42	102	9.63e-19	82.8
Msa1398390	MtrunA17_Chr2g0283181	65.079	63	21	1	145	206	144	206	9.92e-19	85.1
Msa1398390	MtrunA17_Chr4g0062551	51.807	83	39	1	148	229	51	133	1.02e-18	81.6
Msa1398390	MtrunA17_Chr8g0367911	62.712	59	22	0	147	205	41	99	1.29e-18	84.7
Msa1398390	MtrunA17_Chr8g0390091	48.387	93	38	2	124	208	5	95	1.31e-18	83.6
Msa1398390	MtrunA17_Chr4g0026881	61.667	60	22	1	148	206	95	154	1.53e-18	83.6
Msa1398390	MtrunA17_Chr8g0346741	52.239	67	32	0	149	215	38	104	1.63e-18	82.0
Msa1398390	MtrunA17_Chr8g0334801	54.795	73	31	1	139	211	43	113	1.68e-18	82.8
Msa1398390	MtrunA17_Chr4g0017851	52.113	71	29	1	141	206	104	174	1.73e-18	84.7
Msa1398390	MtrunA17_Chr3g0099871	64.912	57	20	0	150	206	27	83	1.80e-18	83.2
Msa1398390	MtrunA17_Chr4g0062161	51.807	83	39	1	148	229	51	133	1.82e-18	82.4
Msa1398390	MtrunA17_Chr4g0055781	68.966	58	17	1	150	206	102	159	1.86e-18	83.6
Msa1398390	MtrunA17_Chr8g0340311	59.322	59	24	0	150	208	47	105	2.31e-18	82.4
Msa1398390	MtrunA17_Chr6g0473961	53.247	77	34	1	133	207	35	111	3.03e-18	82.0
Msa1398390	MtrunA17_Chr2g0282651	63.158	57	21	0	150	206	70	126	3.55e-18	82.8
Msa1398390	MtrunA17_Chr7g0252381	66.071	56	19	0	150	205	42	97	4.00e-18	83.2
Msa1398390	MtrunA17_Chr7g0225131	59.375	64	23	1	144	207	23	83	5.54e-18	78.2
Msa1398390	MtrunA17_Chr5g0432821	55.556	72	32	0	135	206	109	180	6.61e-18	82.8
Msa1398390	MtrunA17_Chr4g0055801	67.241	58	18	1	150	206	154	211	7.06e-18	82.8
Msa1398390	MtrunA17_Chr5g0412641	66.071	56	19	0	150	205	46	101	7.77e-18	83.6
Msa1398390	MtrunA17_Chr6g0473971	52.000	75	34	1	135	207	37	111	8.81e-18	81.6
Msa1398390	MtrunA17_Chr4g0055951	59.322	59	24	0	150	208	74	132	1.05e-17	81.6
Msa1398390	MtrunA17_Chr1g0184061	53.947	76	33	2	132	205	58	133	1.21e-17	80.5
Msa1398390	MtrunA17_Chr2g0297331	67.797	59	18	1	150	207	14	72	1.43e-17	78.2
Msa1398390	MtrunA17_Chr6g0473931	45.098	102	43	2	133	232	14	104	1.67e-17	79.7
Msa1398390	MtrunA17_Chr7g0243431	65.079	63	15	1	150	205	78	140	1.83e-17	83.2
Msa1398390	MtrunA17_Chr3g0136541	62.963	54	20	0	152	205	42	95	1.98e-17	80.5
Msa1398390	MtrunA17_Chr6g0473981	52.000	75	34	1	135	207	37	111	1.98e-17	80.5
Msa1398390	MtrunA17_Chr4g0066931	60.714	56	22	0	150	205	53	108	2.02e-17	82.0
Msa1398390	MtrunA17_Chr6g0473941	44.660	103	44	2	132	232	13	104	2.48e-17	79.3
Msa1398390	MtrunA17_Chr1g0196871	48.276	87	34	2	147	232	13	89	2.53e-17	76.3
Msa1398390	MtrunA17_Chr7g0261101	60.938	64	23	2	146	207	15	78	3.80e-17	77.4
Msa1398390	MtrunA17_Chr6g0473781	50.649	77	36	1	133	207	38	114	6.46e-17	78.6
Msa1398390	MtrunA17_Chr1g0200931	54.286	70	29	2	144	210	17	86	7.06e-17	76.3
Msa1398390	MtrunA17_Chr6g0473881	50.649	77	36	1	133	207	91	167	9.61e-17	79.7
Msa1398390	MtrunA17_Chr2g0286161	58.929	56	23	0	150	205	50	105	1.05e-16	79.3
Msa1398390	MtrunA17_Chr7g0261151	63.793	58	20	1	150	206	20	77	1.06e-16	75.9
Msa1398390	MtrunA17_Chr6g0474001	52.000	75	34	1	133	205	35	109	1.07e-16	79.0
Msa1398390	MtrunA17_Chr1g0183981	61.017	59	22	1	148	205	73	131	1.22e-16	77.8
Msa1398390	MtrunA17_Chr1g0186681	60.000	60	22	1	150	207	19	78	1.87e-16	75.1
Msa1398390	MtrunA17_Chr1g0184011	61.818	55	20	1	152	205	86	140	1.90e-16	77.4
Msa1398390	MtrunA17_Chr4g0026931	58.333	60	24	1	148	206	129	188	2.49e-16	78.2
Msa1398390	MtrunA17_Chr1g0184071	52.000	75	35	1	132	205	51	125	3.21e-16	75.5
Msa1398390	MtrunA17_Chr1g0184031	61.404	57	21	1	150	205	84	140	3.62e-16	76.6
Msa1398390	MtrunA17_Chr6g0453661	56.923	65	28	0	141	205	29	93	3.75e-16	79.0
Msa1398390	MtrunA17_Chr6g0473741	50.649	77	36	1	133	207	47	123	5.11e-16	76.3
Msa1398390	MtrunA17_Chr8g0350701	60.345	58	23	0	148	205	25	82	7.14e-16	77.0
Msa1398390	MtrunA17_Chr7g0253424	58.065	62	26	0	144	205	33	94	7.51e-16	76.6
Msa1398390	MtrunA17_Chr5g0396301	51.562	64	29	1	147	208	15	78	1.09e-15	73.9
Msa1398390	MtrunA17_Chr7g0217991	54.286	70	32	0	136	205	28	97	1.32e-15	77.4
Msa1398390	MtrunA17_Chr4g0042761	58.730	63	26	0	143	205	41	103	3.76e-15	75.1
Msa1398390	MtrunA17_Chr3g0137831	46.602	103	44	2	147	238	5	107	5.25e-15	72.8
Msa1398390	MtrunA17_Chr5g0396191	66.102	59	20	0	150	208	11	69	5.35e-15	72.4
Msa1398390	MtrunA17_Chr6g0473771	54.237	59	27	0	149	207	42	100	6.14e-15	70.5
Msa1398390	MtrunA17_Chr6g0473861	57.627	59	25	0	149	207	62	120	6.75e-15	73.9
Msa1398390	MtrunA17_Chr1g0155751	69.492	59	18	0	150	208	39	97	6.83e-15	73.9
Msa1398390	MtrunA17_Chr8g0378811	46.914	81	43	0	125	205	30	110	7.19e-15	73.6
Msa1398390	MtrunA17_Chr1g0146191	60.656	61	24	0	149	209	46	106	7.64e-15	73.6
Msa1398390	MtrunA17_Chr6g0486711	61.667	60	23	0	149	208	48	107	1.85e-14	72.0
Msa1398390	MtrunA17_Chr5g0398081	48.101	79	33	2	135	205	32	110	3.06e-14	71.2
Msa1398390	MtrunA17_Chr4g0057241	58.621	58	23	1	150	207	15	71	3.16e-14	69.7
Msa1398390	MtrunA17_Chr5g0398091	46.914	81	35	2	135	207	37	117	3.64e-14	70.9
Msa1398390	MtrunA17_Chr5g0398061	44.318	88	41	2	128	207	25	112	6.91e-14	70.1
Msa1398390	MtrunA17_Chr1g0183961	66.102	59	19	1	150	207	27	85	9.14e-14	68.2
Msa1398390	MtrunA17_Chr3g0131601	57.333	75	30	1	132	206	60	132	9.32e-14	70.5
Msa1398390	MtrunA17_Chr6g0461271	48.052	77	40	0	129	205	12	88	1.09e-13	70.9
Msa1398390	MtrunA17_Chr1g0205961	41.860	86	49	1	114	199	80	164	1.24e-13	71.2
Msa1398390	MtrunA17_Chr7g0261171	42.254	142	67	4	129	265	60	191	1.33e-13	69.3
Msa1398390	MtrunA17_Chr3g0142081	61.644	73	27	1	136	208	26	97	1.55e-13	69.3
Msa1398390	MtrunA17_Chr3g0108241	41.379	116	59	3	99	207	60	173	2.48e-13	68.9
Msa1398390	MtrunA17_Chr3g0129421	66.102	59	20	0	148	206	168	226	3.29e-13	69.7
Msa1398390	MtrunA17_Chr5g0396171	43.056	72	41	0	137	208	11	82	3.38e-13	65.1
Msa1398390	MtrunA17_Chr7g0261181	62.712	59	21	1	150	207	13	71	6.69e-13	65.1
Msa1398390	MtrunA17_Chr1g0149331	61.404	57	22	0	150	206	7	63	8.00e-13	66.6
Msa1398390	MtrunA17_Chr6g0473791	48.529	68	33	1	133	198	38	105	1.27e-12	64.7
Msa1398390	MtrunA17_Chr2g0321071	52.459	61	27	2	149	207	46	106	1.54e-12	66.2
Msa1398390	MtrunA17_Chr1g0183931	62.500	64	23	1	144	206	95	158	1.73e-12	66.6
Msa1398390	MtrunA17_Chr1g0170471	58.000	50	20	1	158	206	91	140	2.58e-12	64.7
Msa1398390	MtrunA17_Chr1g0209891	51.667	60	25	2	150	205	54	113	6.27e-12	65.5
Msa1398390	MtrunA17_Chr3g0083501	53.061	49	23	0	158	206	3	51	6.35e-12	60.8
Msa1398390	MtrunA17_Chr5g0423811	45.122	82	37	1	143	216	81	162	8.64e-12	65.1
Msa1398390	MtrunA17_Chr6g0461941	67.213	61	20	0	148	208	18	78	9.04e-12	63.9
Msa1398390	MtrunA17_Chr8g0345551	36.782	87	54	1	104	190	72	157	1.15e-11	65.1
Msa1398390	MtrunA17_Chr8g0345531	63.415	41	15	0	150	190	116	156	1.32e-11	65.1
Msa1398390	MtrunA17_Chr5g0396181	50.000	68	33	1	141	208	13	79	1.38e-11	62.8
Msa1398390	MtrunA17_Chr1g0186741	61.905	63	23	1	145	206	68	130	1.38e-11	63.2
Msa1398390	MtrunA17_Chr1g0167781	38.667	150	74	5	59	205	4	138	1.87e-11	63.2
Msa1398390	MtrunA17_Chr4g0057231	48.718	78	35	3	135	207	27	104	6.83e-11	60.1
Msa1398390	MtrunA17_Chr7g0261201	60.000	60	23	1	148	206	96	155	9.86e-11	61.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1398390	AT1G78080.1	51.821	357	130	11	1	340	1	332	1.30e-94	285
Msa1398390	AT1G22190.1	57.339	218	61	7	129	340	62	253	1.55e-67	213
Msa1398390	AT4G39780.1	39.939	328	123	10	16	340	10	266	5.48e-65	207
Msa1398390	AT2G22200.1	43.972	282	115	8	70	340	6	255	2.78e-63	202
Msa1398390	AT1G36060.1	42.308	338	140	16	22	340	11	312	6.87e-58	190
Msa1398390	AT5G65130.2	40.476	336	123	15	16	340	6	275	3.77e-54	179
Msa1398390	AT5G65130.1	40.476	336	123	15	16	340	4	273	4.32e-54	179
Msa1398390	AT4G13620.1	73.494	83	19	1	132	211	211	293	3.53e-36	135
Msa1398390	AT2G20880.1	85.484	62	9	0	147	208	184	245	5.18e-32	122
Msa1398390	AT1G64380.1	56.800	125	47	2	141	264	127	245	3.15e-30	117
Msa1398390	AT4G28140.1	64.368	87	27	2	123	206	114	199	5.13e-29	113
Msa1398390	AT3G16770.1	61.429	70	27	0	141	210	70	139	9.97e-25	101
Msa1398390	AT2G33710.1	75.439	57	14	0	150	206	70	126	3.95e-24	98.6
Msa1398390	AT2G33710.2	75.439	57	14	0	150	206	70	126	4.37e-24	99.0
Msa1398390	AT5G13330.1	71.186	59	17	0	148	206	37	95	6.91e-23	95.1
Msa1398390	AT3G57600.1	61.538	78	30	0	150	227	28	105	9.48e-23	96.3
Msa1398390	AT2G47520.1	69.492	59	18	0	149	207	49	107	2.14e-22	92.8
Msa1398390	AT4G11140.1	71.930	57	16	0	150	206	87	143	4.03e-22	94.7
Msa1398390	AT5G61890.1	65.152	66	23	0	148	213	88	153	6.63e-22	93.6
Msa1398390	AT5G25390.2	49.474	95	45	1	147	238	4	98	1.15e-21	91.3
Msa1398390	AT4G27950.1	60.811	74	23	1	138	205	100	173	1.29e-21	94.4
Msa1398390	AT5G25190.1	60.938	64	25	0	143	206	1	64	1.43e-21	90.9
Msa1398390	AT1G15360.1	66.667	60	20	0	147	206	4	63	1.43e-21	91.3
Msa1398390	AT1G15360.2	66.667	60	20	0	147	206	4	63	1.43e-21	91.3
Msa1398390	AT4G17500.1	56.322	87	31	3	127	206	119	205	1.81e-21	92.8
Msa1398390	AT1G19210.1	58.209	67	28	0	141	207	3	69	3.24e-21	90.1
Msa1398390	AT5G21960.1	67.241	58	19	0	150	207	7	64	4.31e-21	90.5
Msa1398390	AT2G46310.1	62.121	66	25	0	140	205	89	154	6.78e-21	91.7
Msa1398390	AT1G71450.1	64.407	59	21	0	150	208	24	82	6.85e-21	89.0
Msa1398390	AT1G75490.1	71.930	57	16	0	150	206	42	98	9.39e-21	89.4
Msa1398390	AT1G46768.1	63.934	61	22	0	148	208	29	89	1.23e-20	87.4
Msa1398390	AT1G46768.2	63.934	61	22	0	148	208	29	89	1.23e-20	87.4
Msa1398390	AT1G46768.3	63.934	61	22	0	148	208	29	89	1.25e-20	87.0
Msa1398390	AT3G11020.1	73.684	57	15	0	150	206	78	134	1.40e-20	91.3
Msa1398390	AT5G53290.1	65.625	64	22	0	142	205	117	180	1.49e-20	91.7
Msa1398390	AT2G23340.1	35.256	156	91	3	141	286	19	174	2.16e-20	87.4
Msa1398390	AT5G47220.1	59.211	76	26	2	132	206	103	174	2.52e-20	89.0
Msa1398390	AT2G40340.2	62.500	64	24	0	150	213	14	77	2.98e-20	89.7
Msa1398390	AT2G40340.5	62.500	64	24	0	150	213	14	77	2.98e-20	89.7
Msa1398390	AT2G40340.4	62.500	64	24	0	150	213	14	77	2.98e-20	89.7
Msa1398390	AT1G74930.1	62.069	58	22	0	150	207	21	78	3.58e-20	87.4
Msa1398390	AT4G36900.1	58.209	67	28	0	142	208	22	88	3.66e-20	87.4
Msa1398390	AT3G23230.1	69.492	59	17	1	150	207	20	78	3.86e-20	85.9
Msa1398390	AT5G51190.1	50.526	95	37	3	119	206	38	129	4.41e-20	87.8
Msa1398390	AT2G44840.1	65.000	60	20	1	150	208	92	151	5.07e-20	87.8
Msa1398390	AT4G06746.1	59.375	64	26	0	143	206	29	92	5.37e-20	85.5
Msa1398390	AT3G15210.1	64.407	59	21	0	150	208	25	83	6.46e-20	87.4
Msa1398390	AT5G43410.1	55.556	81	35	1	136	215	1	81	7.08e-20	84.7
Msa1398390	AT5G67190.1	60.938	64	25	0	145	208	16	79	7.39e-20	86.3
Msa1398390	AT2G40340.3	62.500	64	24	0	150	213	72	135	7.59e-20	88.6
Msa1398390	AT2G40340.1	62.500	64	24	0	150	213	72	135	8.08e-20	89.4
Msa1398390	AT2G40340.6	62.500	64	24	0	150	213	79	142	8.80e-20	89.4
Msa1398390	AT2G35700.1	50.602	83	30	1	150	232	45	116	9.93e-20	86.3
Msa1398390	AT5G05410.2	70.175	57	17	0	150	206	79	135	1.07e-19	88.6
Msa1398390	AT1G72360.2	53.165	79	33	1	133	207	55	133	1.08e-19	87.8
Msa1398390	AT5G18450.1	62.857	70	25	1	136	205	21	89	1.49e-19	88.2
Msa1398390	AT5G05410.1	70.175	57	17	0	150	206	79	135	1.94e-19	88.2
Msa1398390	AT3G16280.1	61.667	60	23	0	149	208	60	119	1.97e-19	86.3
Msa1398390	AT5G47230.1	64.286	70	19	2	143	206	144	213	2.35e-19	87.4
Msa1398390	AT3G16280.2	61.667	60	23	0	149	208	78	137	2.50e-19	86.3
Msa1398390	AT5G25390.1	48.421	95	43	2	147	238	4	95	2.71e-19	84.7
Msa1398390	AT3G61630.1	68.852	61	18	1	145	205	101	160	2.98e-19	87.4
Msa1398390	AT4G23750.2	67.241	58	19	0	148	205	120	177	3.25e-19	87.8
Msa1398390	AT4G23750.1	67.241	58	19	0	148	205	120	177	3.25e-19	87.8
Msa1398390	AT3G23240.1	53.571	84	36	2	132	214	66	147	3.25e-19	85.5
Msa1398390	AT4G31060.1	35.976	164	78	7	140	288	17	168	3.57e-19	84.3
Msa1398390	AT1G71130.1	63.235	68	20	1	143	205	72	139	3.65e-19	83.6
Msa1398390	AT4G16750.1	40.984	122	60	2	111	232	2	111	4.84e-19	84.0
Msa1398390	AT5G44210.1	64.912	57	20	0	150	206	33	89	4.92e-19	84.3
Msa1398390	AT1G28360.1	68.421	57	18	0	150	206	12	68	5.52e-19	84.0
Msa1398390	AT1G72360.1	58.730	63	26	0	145	207	20	82	5.59e-19	84.3
Msa1398390	AT3G50260.1	61.017	59	23	0	150	208	21	79	7.56e-19	82.4
Msa1398390	AT1G72360.3	58.730	63	26	0	145	207	69	131	7.62e-19	85.1
Msa1398390	AT1G03800.1	53.425	73	33	1	140	212	44	115	1.17e-18	84.3
Msa1398390	AT4G32800.1	60.000	60	24	0	149	208	18	77	1.24e-18	84.0
Msa1398390	AT2G44940.1	54.167	72	31	1	137	208	89	158	1.45e-18	85.1
Msa1398390	AT3G20310.1	58.824	68	26	1	139	206	18	83	1.55e-18	84.0
Msa1398390	AT5G11590.1	60.000	60	24	0	149	208	50	109	2.24e-18	83.6
Msa1398390	AT5G13910.1	66.667	54	18	0	152	205	22	75	2.49e-18	82.8
Msa1398390	AT5G25810.1	58.333	60	25	0	149	208	35	94	3.18e-18	82.4
Msa1398390	AT2G25820.1	49.383	81	30	1	149	229	25	94	3.23e-18	82.8
Msa1398390	AT4G25470.1	54.217	83	33	2	130	207	26	108	3.49e-18	82.4
Msa1398390	AT1G28160.1	66.071	56	19	0	150	205	39	94	3.50e-18	83.2
Msa1398390	AT2G31230.1	65.517	58	19	1	150	206	86	143	5.38e-18	82.4
Msa1398390	AT1G28370.1	63.158	57	21	0	150	206	20	76	5.41e-18	80.5
Msa1398390	AT4G25490.1	54.545	77	33	1	133	207	29	105	5.87e-18	81.6
Msa1398390	AT1G12980.1	54.545	77	33	1	129	205	38	112	8.61e-18	83.2
Msa1398390	AT4G17490.1	68.966	58	17	1	150	206	137	194	8.66e-18	82.8
Msa1398390	AT1G28370.2	63.158	57	21	0	150	206	58	114	9.21e-18	80.9
Msa1398390	AT1G01250.1	58.621	58	24	0	149	206	44	101	1.51e-17	80.1
Msa1398390	AT3G60490.1	59.322	59	24	0	150	208	71	129	1.57e-17	81.6
Msa1398390	AT4G25480.1	53.247	77	34	1	133	207	32	108	1.60e-17	80.5
Msa1398390	AT1G24590.1	64.407	59	21	0	147	205	55	113	2.01e-17	82.0
Msa1398390	AT5G18560.1	62.500	56	21	0	150	205	55	110	2.38e-17	82.4
Msa1398390	AT5G61600.1	63.333	60	21	1	148	206	86	145	2.38e-17	80.5
Msa1398390	AT2G40350.2	62.712	59	22	0	150	208	74	132	2.66e-17	78.6
Msa1398390	AT2G40350.1	62.712	59	22	0	150	208	67	125	3.52e-17	78.2
Msa1398390	AT2G36450.1	63.333	60	21	1	149	207	14	73	4.44e-17	78.6
Msa1398390	AT1G21910.1	59.649	57	23	0	150	206	50	106	4.48e-17	79.7
Msa1398390	AT1G50640.1	57.353	68	27	1	139	206	19	84	4.62e-17	79.3
Msa1398390	AT5G51990.1	51.190	84	36	2	129	207	28	111	5.01e-17	79.3
Msa1398390	AT1G71520.1	55.556	63	24	1	150	208	14	76	6.41e-17	77.0
Msa1398390	AT1G22810.1	55.738	61	25	1	150	208	14	74	7.56e-17	77.0
Msa1398390	AT4G18450.1	54.930	71	31	1	129	198	89	159	1.76e-16	79.3
Msa1398390	AT1G22985.1	62.295	61	20	1	148	205	73	133	5.03e-16	75.1
Msa1398390	AT5G07580.1	60.656	61	23	1	147	206	107	167	7.11e-16	75.9
Msa1398390	AT1G12890.1	60.714	56	22	0	150	205	21	76	9.47e-16	75.9
Msa1398390	AT5G19790.1	62.069	58	22	0	150	207	22	79	1.11e-15	76.3
Msa1398390	AT4G34410.1	35.751	193	113	4	31	214	10	200	1.36e-15	76.3
Msa1398390	AT1G43160.1	66.154	65	21	1	142	206	54	117	3.74e-15	73.6
Msa1398390	AT5G07310.1	67.797	59	19	0	148	206	90	148	6.98e-15	73.9
Msa1398390	AT1G68550.1	62.295	61	21	1	139	199	102	160	1.20e-14	74.3
Msa1398390	AT1G68550.2	62.295	61	21	1	139	199	102	160	1.20e-14	74.3
Msa1398390	AT1G12610.1	48.000	75	37	1	135	207	13	87	1.35e-14	72.4
Msa1398390	AT5G50080.2	67.797	59	19	0	148	206	84	142	1.35e-14	72.8
Msa1398390	AT5G64750.1	62.963	54	19	1	157	209	192	245	1.54e-14	74.3
Msa1398390	AT5G50080.1	67.797	59	19	0	148	206	75	133	1.60e-14	72.4
Msa1398390	AT1G63030.2	49.315	73	35	1	135	205	13	85	1.88e-14	71.2
Msa1398390	AT1G63030.1	49.315	73	35	1	135	205	13	85	1.88e-14	71.2
Msa1398390	AT1G77200.1	61.017	59	23	0	150	208	43	101	3.61e-14	71.6
Msa1398390	AT2G38340.1	58.108	74	23	1	141	206	61	134	9.84e-14	70.5
Msa1398390	AT1G33760.1	45.631	103	46	1	150	252	20	112	1.53e-13	68.6
Msa1398390	AT5G11190.1	46.392	97	47	2	150	241	7	103	1.76e-13	68.6
Msa1398390	AT2G40220.1	71.429	56	16	0	150	205	55	110	2.28e-13	70.5
Msa1398390	AT1G77640.1	55.224	67	30	0	142	208	35	101	2.07e-12	66.6
Msa1398390	AT3G14230.3	65.574	61	21	0	150	210	123	183	6.82e-12	66.2
Msa1398390	AT3G14230.2	65.574	61	21	0	150	210	124	184	7.10e-12	66.2
Msa1398390	AT3G14230.1	65.574	61	21	0	150	210	128	188	8.27e-12	66.2
Msa1398390	AT1G53170.1	56.716	67	23	1	150	216	31	91	1.25e-11	63.2
Msa1398390	AT3G25890.1	56.897	58	19	2	142	199	127	178	1.44e-11	65.1
Msa1398390	AT3G25890.2	56.897	58	19	2	142	199	127	178	1.44e-11	65.1
Msa1398390	AT1G06160.1	65.000	60	20	1	148	206	80	139	1.87e-11	63.9
Msa1398390	AT1G53910.1	66.667	57	19	0	150	206	125	181	3.74e-11	63.9
Msa1398390	AT1G53910.2	66.667	57	19	0	150	206	125	181	3.74e-11	63.9
Msa1398390	AT1G04370.1	61.538	65	24	1	150	213	20	84	3.89e-11	60.5
Msa1398390	AT1G53910.3	66.667	57	19	0	150	206	123	179	3.92e-11	63.9
Msa1398390	AT5G61590.1	62.295	61	22	1	147	206	104	164	5.18e-11	61.6
Msa1398390	AT3G23220.1	61.017	59	22	1	150	207	14	72	9.50e-11	59.7

Find 78 sgRNAs with CRISPR-Local

Find 164 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GAACCTTGGTGTTTCAAATT+TGG	0.125662	tig0022253:-4926	None:intergenic
AAACACCAAGGTTCAATTAT+TGG	0.192299	tig0022253:+4935	Msa1398390:CDS
CATAACCTTGTTCGGTTCTT+AGG	0.198335	tig0022253:-4812	None:intergenic
TCCATTAATTCACCTCTAAA+TGG	0.199695	tig0022253:-4365	None:intergenic
GACAAAGGCATTGGGGAAAA+TGG	0.241050	tig0022253:+4771	Msa1398390:CDS
CCACTTTCTGATCTTACTTT+TGG	0.243386	tig0022253:+5220	Msa1398390:CDS
CGCTTCTAAGGTGGTTTCTA+AGG	0.249824	tig0022253:+5096	Msa1398390:CDS
TCCATTTAGAGGTGAATTAA+TGG	0.260814	tig0022253:+4364	Msa1398390:CDS
TCAATTATTGGTGGTGAATT+TGG	0.266271	tig0022253:+4947	Msa1398390:CDS
CACAGCTGAGGAAGCTGCTT+TGG	0.287147	tig0022253:+4850	Msa1398390:CDS
CATAACTCAGATCCATTTAG+AGG	0.309655	tig0022253:+4353	Msa1398390:CDS
ACCCTTCTTATGAGATTGAT+TGG	0.323485	tig0022253:+5299	Msa1398390:CDS
GTTGTATTTGTACTTGGATT+TGG	0.339489	tig0022253:-4598	None:intergenic
TACACTGAGCAAAACTTCAT+TGG	0.355939	tig0022253:+4500	Msa1398390:CDS
CTACCACCCACATGCTTCAT+AGG	0.359167	tig0022253:-4713	None:intergenic
GAAGTCGAAAGCCGCTTCTA+AGG	0.367501	tig0022253:+5084	Msa1398390:CDS
ACAAATTATGGCAGCTATGA+TGG	0.380781	tig0022253:+4304	None:intergenic
TTTAGCTGAGATGCAGAAAC+AGG	0.382190	tig0022253:+5027	Msa1398390:CDS
TTGTAAGGTTGAAGCAGTTT+CGG	0.399604	tig0022253:+5162	Msa1398390:CDS
TTCGATGCCGGCGTCTTCTT+CGG	0.410941	tig0022253:-5064	None:intergenic
AGGAGTGAGACAAAGGCATT+GGG	0.417857	tig0022253:+4763	Msa1398390:CDS
CTAAGAACCGAACAAGGTTA+TGG	0.419772	tig0022253:+4813	Msa1398390:CDS
CACTCCTCTGTATAGCTTCG+TGG	0.429543	tig0022253:-4747	None:intergenic
CCCTTCTTATGAGATTGATT+GGG	0.440117	tig0022253:+5300	Msa1398390:CDS
GTCTGTTGATGATTTGAAGA+AGG	0.443769	tig0022253:+5120	Msa1398390:CDS
TACCAAGCCATAACCTTGTT+CGG	0.447712	tig0022253:-4820	None:intergenic
TGCTTCATAGGAATTGACTT+TGG	0.451857	tig0022253:-4701	None:intergenic
TTGAATTTGTTGTTGTTGCA+TGG	0.452718	tig0022253:-4633	None:intergenic
AGAGCCAGAGGAGTGTTGTA+AGG	0.456283	tig0022253:+5147	Msa1398390:CDS
TTTGTTGTTGTATTTGTACT+TGG	0.466887	tig0022253:-4604	None:intergenic
ACAAAGGCATTGGGGAAAAT+GGG	0.468412	tig0022253:+4772	Msa1398390:CDS
TCCCAATCAATCTCATAAGA+AGG	0.478799	tig0022253:-5301	None:intergenic
TGGATTTGGTTGATCTGTGA+TGG	0.500955	tig0022253:-4584	None:intergenic
GCGGCTTTCGACTTCGATGC+CGG	0.504434	tig0022253:-5076	None:intergenic
GAGGAGTGAGACAAAGGCAT+TGG	0.506013	tig0022253:+4762	Msa1398390:CDS
ACTCCTCTGTATAGCTTCGT+GGG	0.515818	tig0022253:-4746	None:intergenic
GAGAGAGAAGAAGAATAAGA+AGG	0.526396	tig0022253:-4449	None:intergenic
AGCTACGTGGTGACTTTGCT+AGG	0.527564	tig0022253:+4894	Msa1398390:CDS
CACCACCAATAATTGAACCT+TGG	0.527953	tig0022253:-4940	None:intergenic
GATGAAGGTGAAGTTGAAGA+AGG	0.528950	tig0022253:-4413	None:intergenic
GAAGAAGAATAAGAAGGTGA+TGG	0.533285	tig0022253:-4443	None:intergenic
AGCTTCCTCAGCTGTGTCAA+AGG	0.541181	tig0022253:-4843	None:intergenic
AGCTTAGCATCAACAGAAGA+AGG	0.541694	tig0022253:-4986	None:intergenic
TGGTTCAGACCAAGAAGAGA+AGG	0.548293	tig0022253:-4554	None:intergenic
AAGCTTCAAGCTATTTGTGA+AGG	0.548878	tig0022253:+5004	Msa1398390:CDS
TCAACCTTACAACACTCCTC+TGG	0.550117	tig0022253:-5151	None:intergenic
AAAGGAGAGAGAGAAGAGAA+AGG	0.550216	tig0022253:-4476	None:intergenic
GTCGAAAGCCGCTTCTAAGG+TGG	0.560573	tig0022253:+5087	Msa1398390:CDS
CCCAATCAATCTCATAAGAA+GGG	0.561445	tig0022253:-5300	None:intergenic
GCATCAACAGAAGAAGGAAG+AGG	0.563829	tig0022253:-4980	None:intergenic
GAAGAAGGATTCAGAGCCAG+AGG	0.565926	tig0022253:+5135	Msa1398390:CDS
TATACAGAGGAGTGAGACAA+AGG	0.572750	tig0022253:+4756	Msa1398390:CDS
ACTGAGAGTGAAGGTTCTGA+AGG	0.574770	tig0022253:+5190	Msa1398390:CDS
CACCAAGGTTCAATTATTGG+TGG	0.582649	tig0022253:+4938	Msa1398390:CDS
AACCGAACAAGGTTATGGCT+TGG	0.584727	tig0022253:+4818	Msa1398390:CDS
CTTAGAAACCACCTTAGAAG+CGG	0.586662	tig0022253:-5095	None:intergenic
TGTTGGTGAGCCACAGTGGG+AGG	0.587402	tig0022253:+5246	Msa1398390:CDS
GTCAATTCCTATGAAGCATG+TGG	0.591838	tig0022253:+4706	Msa1398390:CDS
CCAAAAGTAAGATCAGAAAG+TGG	0.594128	tig0022253:-5220	None:intergenic
TTTCCAAATTTGAAACACCA+AGG	0.597546	tig0022253:+4923	Msa1398390:CDS
TCGGTGATTACTGAGAGTGA+AGG	0.602246	tig0022253:+5181	Msa1398390:CDS
AGAGAAGCCGAAGAAGACGC+CGG	0.606853	tig0022253:+5057	Msa1398390:CDS
GACTACCTAAGAACCGAACA+AGG	0.621436	tig0022253:+4807	Msa1398390:CDS
GGTGATGGTGTTGAAGATGA+AGG	0.634546	tig0022253:-4428	None:intergenic
TTAGCTGAGATGCAGAAACA+GGG	0.637834	tig0022253:+5028	Msa1398390:CDS
TGATGTTGGTGAGCCACAGT+GGG	0.640457	tig0022253:+5243	Msa1398390:CDS
TGATCTGTGATGGTGTCAAG+TGG	0.647212	tig0022253:-4574	None:intergenic
TGAGATGCAGAAACAGGGGA+AGG	0.648958	tig0022253:+5033	Msa1398390:CDS
TGGTACCTTTGACACAGCTG+AGG	0.650359	tig0022253:+4838	Msa1398390:CDS
GTTGGTGAGCCACAGTGGGA+GGG	0.654158	tig0022253:+5247	Msa1398390:CDS
TCTGAATCACCCTCCCACTG+TGG	0.654829	tig0022253:-5256	None:intergenic
TCAATTCCTATGAAGCATGT+GGG	0.662329	tig0022253:+4707	Msa1398390:CDS
GTGATGTTGGTGAGCCACAG+TGG	0.665421	tig0022253:+5242	Msa1398390:CDS
ATTCCTATGAAGCATGTGGG+TGG	0.671043	tig0022253:+4710	Msa1398390:CDS
TAGCTGAGATGCAGAAACAG+GGG	0.700327	tig0022253:+5029	Msa1398390:CDS
GGAGTGAGACAAAGGCATTG+GGG	0.719640	tig0022253:+4764	Msa1398390:CDS
AAACCCACGAAGCTATACAG+AGG	0.751413	tig0022253:+4743	Msa1398390:CDS
AAAGCTGCTTATAAGCTACG+TGG	0.774181	tig0022253:+4881	Msa1398390:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTGTTGTTGTATTTGTACT+TGG	-	tig0022253:4607-4626	None:intergenic	25.0%
!!!	TTTGTTGTTGTATTTGTACT+TGG	-	tig0022253:4607-4626	None:intergenic	25.0%
	TCCATTTAGAGGTGAATTAA+TGG	+	tig0022253:4364-4383	Msa1398390:CDS	30.0%
	TCCATTAATTCACCTCTAAA+TGG	-	tig0022253:4368-4387	None:intergenic	30.0%
!	GAAGAAGGACTTTTGATAAA+AGG	-	tig0022253:4401-4420	None:intergenic	30.0%
	GTTGTATTTGTACTTGGATT+TGG	-	tig0022253:4601-4620	None:intergenic	30.0%
!!	TTGAATTTGTTGTTGTTGCA+TGG	-	tig0022253:4636-4655	None:intergenic	30.0%
!	TTTCCAAATTTGAAACACCA+AGG	+	tig0022253:4923-4942	Msa1398390:CDS	30.0%
	AAACACCAAGGTTCAATTAT+TGG	+	tig0022253:4935-4954	Msa1398390:CDS	30.0%
!!	TCAATTATTGGTGGTGAATT+TGG	+	tig0022253:4947-4966	Msa1398390:CDS	30.0%
	TCCATTTAGAGGTGAATTAA+TGG	+	tig0022253:4364-4383	Msa1398390:CDS	30.0%
	TCCATTAATTCACCTCTAAA+TGG	-	tig0022253:4368-4387	None:intergenic	30.0%
!	GAAGAAGGACTTTTGATAAA+AGG	-	tig0022253:4401-4420	None:intergenic	30.0%
	GTTGTATTTGTACTTGGATT+TGG	-	tig0022253:4601-4620	None:intergenic	30.0%
!!	TTGAATTTGTTGTTGTTGCA+TGG	-	tig0022253:4636-4655	None:intergenic	30.0%
!	TTTCCAAATTTGAAACACCA+AGG	+	tig0022253:4923-4942	Msa1398390:CDS	30.0%
	AAACACCAAGGTTCAATTAT+TGG	+	tig0022253:4935-4954	Msa1398390:CDS	30.0%
!!	TCAATTATTGGTGGTGAATT+TGG	+	tig0022253:4947-4966	Msa1398390:CDS	30.0%
	CATAACTCAGATCCATTTAG+AGG	+	tig0022253:4353-4372	Msa1398390:CDS	35.0%
	GAAGAAGAATAAGAAGGTGA+TGG	-	tig0022253:4446-4465	None:intergenic	35.0%
	GAGAGAGAAGAAGAATAAGA+AGG	-	tig0022253:4452-4471	None:intergenic	35.0%
!	AAGTTTTGCTCAGTGTAGAA+AGG	-	tig0022253:4497-4516	None:intergenic	35.0%
	TACACTGAGCAAAACTTCAT+TGG	+	tig0022253:4500-4519	Msa1398390:CDS	35.0%
	GGAGAAGAAAAAGAAGAAGA+TGG	-	tig0022253:4536-4555	None:intergenic	35.0%
!	TTTTCTTCTCCTTCTCTTCT+TGG	+	tig0022253:4545-4564	Msa1398390:CDS	35.0%
!	TGCTTCATAGGAATTGACTT+TGG	-	tig0022253:4704-4723	None:intergenic	35.0%
	TCAATTCCTATGAAGCATGT+GGG	+	tig0022253:4707-4726	Msa1398390:CDS	35.0%
!!	GAACCTTGGTGTTTCAAATT+TGG	-	tig0022253:4929-4948	None:intergenic	35.0%
	AAGCTTCAAGCTATTTGTGA+AGG	+	tig0022253:5004-5023	Msa1398390:CDS	35.0%
!!	GTCTGTTGATGATTTGAAGA+AGG	+	tig0022253:5120-5139	Msa1398390:CDS	35.0%
	TTGTAAGGTTGAAGCAGTTT+CGG	+	tig0022253:5162-5181	Msa1398390:CDS	35.0%
	CCAAAAGTAAGATCAGAAAG+TGG	-	tig0022253:5223-5242	None:intergenic	35.0%
!	CCACTTTCTGATCTTACTTT+TGG	+	tig0022253:5220-5239	Msa1398390:CDS	35.0%
!!!	GATCTTACTTTTGGTGATGT+TGG	+	tig0022253:5229-5248	Msa1398390:CDS	35.0%
	ACCCTTCTTATGAGATTGAT+TGG	+	tig0022253:5299-5318	Msa1398390:CDS	35.0%
	CCCAATCAATCTCATAAGAA+GGG	-	tig0022253:5303-5322	None:intergenic	35.0%
	CCCTTCTTATGAGATTGATT+GGG	+	tig0022253:5300-5319	Msa1398390:CDS	35.0%
	TCCCAATCAATCTCATAAGA+AGG	-	tig0022253:5304-5323	None:intergenic	35.0%
	CATAACTCAGATCCATTTAG+AGG	+	tig0022253:4353-4372	Msa1398390:CDS	35.0%
	GAAGAAGAATAAGAAGGTGA+TGG	-	tig0022253:4446-4465	None:intergenic	35.0%
	GAGAGAGAAGAAGAATAAGA+AGG	-	tig0022253:4452-4471	None:intergenic	35.0%
!	AAGTTTTGCTCAGTGTAGAA+AGG	-	tig0022253:4497-4516	None:intergenic	35.0%
	TACACTGAGCAAAACTTCAT+TGG	+	tig0022253:4500-4519	Msa1398390:CDS	35.0%
	GGAGAAGAAAAAGAAGAAGA+TGG	-	tig0022253:4536-4555	None:intergenic	35.0%
!	TTTTCTTCTCCTTCTCTTCT+TGG	+	tig0022253:4545-4564	Msa1398390:CDS	35.0%
!	TGCTTCATAGGAATTGACTT+TGG	-	tig0022253:4704-4723	None:intergenic	35.0%
	TCAATTCCTATGAAGCATGT+GGG	+	tig0022253:4707-4726	Msa1398390:CDS	35.0%
!!	GAACCTTGGTGTTTCAAATT+TGG	-	tig0022253:4929-4948	None:intergenic	35.0%
	AAGCTTCAAGCTATTTGTGA+AGG	+	tig0022253:5004-5023	Msa1398390:CDS	35.0%
!!	GTCTGTTGATGATTTGAAGA+AGG	+	tig0022253:5120-5139	Msa1398390:CDS	35.0%
	TTGTAAGGTTGAAGCAGTTT+CGG	+	tig0022253:5162-5181	Msa1398390:CDS	35.0%
	CCAAAAGTAAGATCAGAAAG+TGG	-	tig0022253:5223-5242	None:intergenic	35.0%
!	CCACTTTCTGATCTTACTTT+TGG	+	tig0022253:5220-5239	Msa1398390:CDS	35.0%
!!!	GATCTTACTTTTGGTGATGT+TGG	+	tig0022253:5229-5248	Msa1398390:CDS	35.0%
	ACCCTTCTTATGAGATTGAT+TGG	+	tig0022253:5299-5318	Msa1398390:CDS	35.0%
	CCCAATCAATCTCATAAGAA+GGG	-	tig0022253:5303-5322	None:intergenic	35.0%
	CCCTTCTTATGAGATTGATT+GGG	+	tig0022253:5300-5319	Msa1398390:CDS	35.0%
	TCCCAATCAATCTCATAAGA+AGG	-	tig0022253:5304-5323	None:intergenic	35.0%
	GATGAAGGTGAAGTTGAAGA+AGG	-	tig0022253:4416-4435	None:intergenic	40.0%
	AAAGGAGAGAGAGAAGAGAA+AGG	-	tig0022253:4479-4498	None:intergenic	40.0%
!	TGGATTTGGTTGATCTGTGA+TGG	-	tig0022253:4587-4606	None:intergenic	40.0%
	GTCAATTCCTATGAAGCATG+TGG	+	tig0022253:4706-4725	Msa1398390:CDS	40.0%
	TATACAGAGGAGTGAGACAA+AGG	+	tig0022253:4756-4775	Msa1398390:CDS	40.0%
!!	ACAAAGGCATTGGGGAAAAT+GGG	+	tig0022253:4772-4791	Msa1398390:CDS	40.0%
	CATAACCTTGTTCGGTTCTT+AGG	-	tig0022253:4815-4834	None:intergenic	40.0%
	CTAAGAACCGAACAAGGTTA+TGG	+	tig0022253:4813-4832	Msa1398390:CDS	40.0%
	TACCAAGCCATAACCTTGTT+CGG	-	tig0022253:4823-4842	None:intergenic	40.0%
	AAAGCTGCTTATAAGCTACG+TGG	+	tig0022253:4881-4900	Msa1398390:CDS	40.0%
	CACCAAGGTTCAATTATTGG+TGG	+	tig0022253:4938-4957	Msa1398390:CDS	40.0%
	CACCACCAATAATTGAACCT+TGG	-	tig0022253:4943-4962	None:intergenic	40.0%
	AGCTTAGCATCAACAGAAGA+AGG	-	tig0022253:4989-5008	None:intergenic	40.0%
	TTTAGCTGAGATGCAGAAAC+AGG	+	tig0022253:5027-5046	Msa1398390:CDS	40.0%
	TTAGCTGAGATGCAGAAACA+GGG	+	tig0022253:5028-5047	Msa1398390:CDS	40.0%
	CTTAGAAACCACCTTAGAAG+CGG	-	tig0022253:5098-5117	None:intergenic	40.0%
	GATGAAGGTGAAGTTGAAGA+AGG	-	tig0022253:4416-4435	None:intergenic	40.0%
	AAAGGAGAGAGAGAAGAGAA+AGG	-	tig0022253:4479-4498	None:intergenic	40.0%
!	TGGATTTGGTTGATCTGTGA+TGG	-	tig0022253:4587-4606	None:intergenic	40.0%
	GTCAATTCCTATGAAGCATG+TGG	+	tig0022253:4706-4725	Msa1398390:CDS	40.0%
	TATACAGAGGAGTGAGACAA+AGG	+	tig0022253:4756-4775	Msa1398390:CDS	40.0%
!!	ACAAAGGCATTGGGGAAAAT+GGG	+	tig0022253:4772-4791	Msa1398390:CDS	40.0%
	CATAACCTTGTTCGGTTCTT+AGG	-	tig0022253:4815-4834	None:intergenic	40.0%
	CTAAGAACCGAACAAGGTTA+TGG	+	tig0022253:4813-4832	Msa1398390:CDS	40.0%
	TACCAAGCCATAACCTTGTT+CGG	-	tig0022253:4823-4842	None:intergenic	40.0%
	AAAGCTGCTTATAAGCTACG+TGG	+	tig0022253:4881-4900	Msa1398390:CDS	40.0%
	CACCAAGGTTCAATTATTGG+TGG	+	tig0022253:4938-4957	Msa1398390:CDS	40.0%
	CACCACCAATAATTGAACCT+TGG	-	tig0022253:4943-4962	None:intergenic	40.0%
	AGCTTAGCATCAACAGAAGA+AGG	-	tig0022253:4989-5008	None:intergenic	40.0%
	TTTAGCTGAGATGCAGAAAC+AGG	+	tig0022253:5027-5046	Msa1398390:CDS	40.0%
	TTAGCTGAGATGCAGAAACA+GGG	+	tig0022253:5028-5047	Msa1398390:CDS	40.0%
	CTTAGAAACCACCTTAGAAG+CGG	-	tig0022253:5098-5117	None:intergenic	40.0%
!	GGTGATGGTGTTGAAGATGA+AGG	-	tig0022253:4431-4450	None:intergenic	45.0%
	TGGTTCAGACCAAGAAGAGA+AGG	-	tig0022253:4557-4576	None:intergenic	45.0%
!	TGATCTGTGATGGTGTCAAG+TGG	-	tig0022253:4577-4596	None:intergenic	45.0%
	ATTCCTATGAAGCATGTGGG+TGG	+	tig0022253:4710-4729	Msa1398390:CDS	45.0%
	AAACCCACGAAGCTATACAG+AGG	+	tig0022253:4743-4762	Msa1398390:CDS	45.0%
	ACTCCTCTGTATAGCTTCGT+GGG	-	tig0022253:4749-4768	None:intergenic	45.0%
!!	AGGAGTGAGACAAAGGCATT+GGG	+	tig0022253:4763-4782	Msa1398390:CDS	45.0%
!!	GACAAAGGCATTGGGGAAAA+TGG	+	tig0022253:4771-4790	Msa1398390:CDS	45.0%
	GACTACCTAAGAACCGAACA+AGG	+	tig0022253:4807-4826	Msa1398390:CDS	45.0%
	AACCGAACAAGGTTATGGCT+TGG	+	tig0022253:4818-4837	Msa1398390:CDS	45.0%
	GCATCAACAGAAGAAGGAAG+AGG	-	tig0022253:4983-5002	None:intergenic	45.0%
	TAGCTGAGATGCAGAAACAG+GGG	+	tig0022253:5029-5048	Msa1398390:CDS	45.0%
!!	CGCTTCTAAGGTGGTTTCTA+AGG	+	tig0022253:5096-5115	Msa1398390:CDS	45.0%
	TCAACCTTACAACACTCCTC+TGG	-	tig0022253:5154-5173	None:intergenic	45.0%
	TCGGTGATTACTGAGAGTGA+AGG	+	tig0022253:5181-5200	Msa1398390:CDS	45.0%
!	ACTGAGAGTGAAGGTTCTGA+AGG	+	tig0022253:5190-5209	Msa1398390:CDS	45.0%
!	GGTGATGGTGTTGAAGATGA+AGG	-	tig0022253:4431-4450	None:intergenic	45.0%
	TGGTTCAGACCAAGAAGAGA+AGG	-	tig0022253:4557-4576	None:intergenic	45.0%
!	TGATCTGTGATGGTGTCAAG+TGG	-	tig0022253:4577-4596	None:intergenic	45.0%
	ATTCCTATGAAGCATGTGGG+TGG	+	tig0022253:4710-4729	Msa1398390:CDS	45.0%
	AAACCCACGAAGCTATACAG+AGG	+	tig0022253:4743-4762	Msa1398390:CDS	45.0%
	ACTCCTCTGTATAGCTTCGT+GGG	-	tig0022253:4749-4768	None:intergenic	45.0%
!!	AGGAGTGAGACAAAGGCATT+GGG	+	tig0022253:4763-4782	Msa1398390:CDS	45.0%
!!	GACAAAGGCATTGGGGAAAA+TGG	+	tig0022253:4771-4790	Msa1398390:CDS	45.0%
	GACTACCTAAGAACCGAACA+AGG	+	tig0022253:4807-4826	Msa1398390:CDS	45.0%
	AACCGAACAAGGTTATGGCT+TGG	+	tig0022253:4818-4837	Msa1398390:CDS	45.0%
	GCATCAACAGAAGAAGGAAG+AGG	-	tig0022253:4983-5002	None:intergenic	45.0%
	TAGCTGAGATGCAGAAACAG+GGG	+	tig0022253:5029-5048	Msa1398390:CDS	45.0%
!!	CGCTTCTAAGGTGGTTTCTA+AGG	+	tig0022253:5096-5115	Msa1398390:CDS	45.0%
	TCAACCTTACAACACTCCTC+TGG	-	tig0022253:5154-5173	None:intergenic	45.0%
	TCGGTGATTACTGAGAGTGA+AGG	+	tig0022253:5181-5200	Msa1398390:CDS	45.0%
!	ACTGAGAGTGAAGGTTCTGA+AGG	+	tig0022253:5190-5209	Msa1398390:CDS	45.0%
	CTACCACCCACATGCTTCAT+AGG	-	tig0022253:4716-4735	None:intergenic	50.0%
	CACTCCTCTGTATAGCTTCG+TGG	-	tig0022253:4750-4769	None:intergenic	50.0%
!	GAGGAGTGAGACAAAGGCAT+TGG	+	tig0022253:4762-4781	Msa1398390:CDS	50.0%
!!	GGAGTGAGACAAAGGCATTG+GGG	+	tig0022253:4764-4783	Msa1398390:CDS	50.0%
	TGGTACCTTTGACACAGCTG+AGG	+	tig0022253:4838-4857	Msa1398390:CDS	50.0%
	AGCTTCCTCAGCTGTGTCAA+AGG	-	tig0022253:4846-4865	None:intergenic	50.0%
	AGCTACGTGGTGACTTTGCT+AGG	+	tig0022253:4894-4913	Msa1398390:CDS	50.0%
	TGAGATGCAGAAACAGGGGA+AGG	+	tig0022253:5033-5052	Msa1398390:CDS	50.0%
	GAAGTCGAAAGCCGCTTCTA+AGG	+	tig0022253:5084-5103	Msa1398390:CDS	50.0%
	GAAGAAGGATTCAGAGCCAG+AGG	+	tig0022253:5135-5154	Msa1398390:CDS	50.0%
!!	AGAGCCAGAGGAGTGTTGTA+AGG	+	tig0022253:5147-5166	Msa1398390:CDS	50.0%
!	TGATGTTGGTGAGCCACAGT+GGG	+	tig0022253:5243-5262	Msa1398390:CDS	50.0%
	CTACCACCCACATGCTTCAT+AGG	-	tig0022253:4716-4735	None:intergenic	50.0%
	CACTCCTCTGTATAGCTTCG+TGG	-	tig0022253:4750-4769	None:intergenic	50.0%
!	GAGGAGTGAGACAAAGGCAT+TGG	+	tig0022253:4762-4781	Msa1398390:CDS	50.0%
!!	GGAGTGAGACAAAGGCATTG+GGG	+	tig0022253:4764-4783	Msa1398390:CDS	50.0%
	TGGTACCTTTGACACAGCTG+AGG	+	tig0022253:4838-4857	Msa1398390:CDS	50.0%
	AGCTTCCTCAGCTGTGTCAA+AGG	-	tig0022253:4846-4865	None:intergenic	50.0%
	AGCTACGTGGTGACTTTGCT+AGG	+	tig0022253:4894-4913	Msa1398390:CDS	50.0%
	TGAGATGCAGAAACAGGGGA+AGG	+	tig0022253:5033-5052	Msa1398390:CDS	50.0%
	GAAGTCGAAAGCCGCTTCTA+AGG	+	tig0022253:5084-5103	Msa1398390:CDS	50.0%
	GAAGAAGGATTCAGAGCCAG+AGG	+	tig0022253:5135-5154	Msa1398390:CDS	50.0%
!!	AGAGCCAGAGGAGTGTTGTA+AGG	+	tig0022253:5147-5166	Msa1398390:CDS	50.0%
!	TGATGTTGGTGAGCCACAGT+GGG	+	tig0022253:5243-5262	Msa1398390:CDS	50.0%
	CACAGCTGAGGAAGCTGCTT+TGG	+	tig0022253:4850-4869	Msa1398390:CDS	55.0%
	AGAGAAGCCGAAGAAGACGC+CGG	+	tig0022253:5057-5076	Msa1398390:CDS	55.0%
	TTCGATGCCGGCGTCTTCTT+CGG	-	tig0022253:5067-5086	None:intergenic	55.0%
!	GTCGAAAGCCGCTTCTAAGG+TGG	+	tig0022253:5087-5106	Msa1398390:CDS	55.0%
!	GTGATGTTGGTGAGCCACAG+TGG	+	tig0022253:5242-5261	Msa1398390:CDS	55.0%
	TCTGAATCACCCTCCCACTG+TGG	-	tig0022253:5259-5278	None:intergenic	55.0%
	CACAGCTGAGGAAGCTGCTT+TGG	+	tig0022253:4850-4869	Msa1398390:CDS	55.0%
	AGAGAAGCCGAAGAAGACGC+CGG	+	tig0022253:5057-5076	Msa1398390:CDS	55.0%
	TTCGATGCCGGCGTCTTCTT+CGG	-	tig0022253:5067-5086	None:intergenic	55.0%
!	GTCGAAAGCCGCTTCTAAGG+TGG	+	tig0022253:5087-5106	Msa1398390:CDS	55.0%
!	GTGATGTTGGTGAGCCACAG+TGG	+	tig0022253:5242-5261	Msa1398390:CDS	55.0%
	TCTGAATCACCCTCCCACTG+TGG	-	tig0022253:5259-5278	None:intergenic	55.0%
	GCGGCTTTCGACTTCGATGC+CGG	-	tig0022253:5079-5098	None:intergenic	60.0%
!	TGTTGGTGAGCCACAGTGGG+AGG	+	tig0022253:5246-5265	Msa1398390:CDS	60.0%
!	GTTGGTGAGCCACAGTGGGA+GGG	+	tig0022253:5247-5266	Msa1398390:CDS	60.0%
	GCGGCTTTCGACTTCGATGC+CGG	-	tig0022253:5079-5098	None:intergenic	60.0%
!	TGTTGGTGAGCCACAGTGGG+AGG	+	tig0022253:5246-5265	Msa1398390:CDS	60.0%
!	GTTGGTGAGCCACAGTGGGA+GGG	+	tig0022253:5247-5266	Msa1398390:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
tig0022253	gene	4311	5333	4311	ID=Msa1398390;Name=Msa1398390
tig0022253	mRNA	4311	5333	4311	ID=Msa1398390-mRNA-1;Parent=Msa1398390;Name=Msa1398390-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|340
tig0022253	exon	4311	5333	4311	ID=Msa1398390-mRNA-1:exon:16592;Parent=Msa1398390-mRNA-1
tig0022253	CDS	4311	5333	4311	ID=Msa1398390-mRNA-1:cds;Parent=Msa1398390-mRNA-1

Gene Sequence

>Msa1398390

ATGGCAGCTATGATGGATTATTACAGTAACATGCAACAGTTTCATAACTCAGATCCATTTAGAGGTGAATTAATGGAAGTTCTTGAACCTTTTATCAAAAGTCCTTCTTCAACTTCACCTTCATCTTCAACACCATCACCTTCTTATTCTTCTTCTCTCTCTTCACCTTTCTCTTCTCTCTCTCCTTTCTACACTGAGCAAAACTTCATTGGCTTTGCTCAACCATCTTCTTCTTTTTCTTCTCCTTCTCTTCTTGGTCTGAACCACTTGACACCATCACAGATCAACCAAATCCAAGTACAAATACAACAACAAAACTTCACCATGCAACAACAACAAATTCAACAGCAACAACAACGTTGTCTCAGTAACACTTTGAGTTTTCTTAGTCCAAAGTCAATTCCTATGAAGCATGTGGGTGGTAGTGTTTCAAAACCCACGAAGCTATACAGAGGAGTGAGACAAAGGCATTGGGGAAAATGGGTTGCTGAGATAAGACTACCTAAGAACCGAACAAGGTTATGGCTTGGTACCTTTGACACAGCTGAGGAAGCTGCTTTGGCTTATGATAAAGCTGCTTATAAGCTACGTGGTGACTTTGCTAGGCTAAATTTTCCAAATTTGAAACACCAAGGTTCAATTATTGGTGGTGAATTTGGTGAGTTTAAGCCTCTTCCTTCTTCTGTTGATGCTAAGCTTCAAGCTATTTGTGAAGGTTTAGCTGAGATGCAGAAACAGGGGAAGGCAGAGAAGCCGAAGAAGACGCCGGCATCGAAGTCGAAAGCCGCTTCTAAGGTGGTTTCTAAGGAGTCTGTTGATGATTTGAAGAAGGATTCAGAGCCAGAGGAGTGTTGTAAGGTTGAAGCAGTTTCGGTGATTACTGAGAGTGAAGGTTCTGAAGGTTCTTCACCACTTTCTGATCTTACTTTTGGTGATGTTGGTGAGCCACAGTGGGAGGGTGATTCAGAAAATTTTAATTTGCTGAAGTACCCTTCTTATGAGATTGATTGGGATTCTCTGTGA

Protein sequence

>Msa1398390

MAAMMDYYSNMQQFHNSDPFRGELMEVLEPFIKSPSSTSPSSSTPSPSYSSSLSSPFSSLSPFYTEQNFIGFAQPSSSFSSPSLLGLNHLTPSQINQIQVQIQQQNFTMQQQQIQQQQQRCLSNTLSFLSPKSIPMKHVGGSVSKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPNLKHQGSIIGGEFGEFKPLPSSVDAKLQAICEGLAEMQKQGKAEKPKKTPASKSKAASKVVSKESVDDLKKDSEPEECCKVEAVSVITESEGSEGSSPLSDLTFGDVGEPQWEGDSENFNLLKYPSYEIDWDSL*