Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1415150 | A0A396IHZ2 | 99.067 | 750 | 7 | 0 | 1 | 750 | 1 | 750 | 0.0 | 1559 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0100160 | Msa1415150 | 0.810837 | 9.449858e-51 | -8.615850e-47 |
| Msa1359560 | Msa1415150 | 0.806297 | 8.809416e-50 | -8.615850e-47 |
| Msa1369150 | Msa1415150 | 0.805353 | 1.390478e-49 | -8.615850e-47 |
| Msa1392580 | Msa1415150 | 0.800805 | 1.213247e-48 | -8.615850e-47 |
| Msa1409330 | Msa1415150 | 0.902339 | 1.072064e-78 | -8.615850e-47 |
| Msa0652690 | Msa1415150 | 0.800663 | 1.296626e-48 | -8.615850e-47 |
| Msa0237210 | Msa1415150 | 0.833055 | 6.642418e-56 | -8.615850e-47 |
| Msa1266810 | Msa1415150 | 0.915960 | 3.158951e-85 | -8.615850e-47 |
| Msa1320670 | Msa1415150 | 0.822984 | 1.768161e-53 | -8.615850e-47 |
| Msa1332760 | Msa1415150 | 0.809218 | 2.109423e-50 | -8.615850e-47 |
| Msa0479200 | Msa1415150 | 0.801566 | 8.475120e-49 | -8.615850e-47 |
| Msa0263080 | Msa1415150 | 0.802341 | 5.873404e-49 | -8.615850e-47 |
| Msa0274980 | Msa1415150 | 0.808609 | 2.847194e-50 | -8.615850e-47 |
| Msa0300320 | Msa1415150 | 0.802788 | 4.750843e-49 | -8.615850e-47 |
| Msa0315690 | Msa1415150 | 0.819413 | 1.176884e-52 | -8.615850e-47 |
| Msa0341690 | Msa1415150 | 0.806744 | 7.089536e-50 | -8.615850e-47 |
| Msa1219500 | Msa1415150 | 0.897319 | 1.578402e-76 | -8.615850e-47 |
| Msa0483100 | Msa1415150 | 0.804071 | 2.575357e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1415150 | MtrunA17_Chr4g0069321 | 99.067 | 750 | 7 | 0 | 1 | 750 | 1 | 750 | 0.0 | 1559 |
| Msa1415150 | MtrunA17_Chr1g0193171 | 61.178 | 747 | 277 | 6 | 8 | 748 | 5 | 744 | 0.0 | 935 |
| Msa1415150 | MtrunA17_Chr4g0049281 | 39.442 | 573 | 329 | 7 | 186 | 748 | 8 | 572 | 2.95e-144 | 435 |
| Msa1415150 | MtrunA17_Chr1g0190521 | 39.168 | 577 | 328 | 7 | 186 | 747 | 196 | 764 | 9.12e-143 | 437 |
| Msa1415150 | MtrunA17_Chr1g0190511 | 38.821 | 577 | 330 | 7 | 186 | 747 | 91 | 659 | 2.33e-141 | 430 |
| Msa1415150 | MtrunA17_Chr7g0275141 | 35.579 | 579 | 351 | 6 | 186 | 749 | 22 | 593 | 2.11e-130 | 400 |
| Msa1415150 | MtrunA17_Chr2g0281381 | 29.561 | 592 | 362 | 13 | 196 | 749 | 375 | 949 | 2.81e-82 | 283 |
| Msa1415150 | MtrunA17_Chr6g0462901 | 28.995 | 607 | 377 | 15 | 178 | 749 | 405 | 992 | 8.41e-79 | 274 |
| Msa1415150 | MtrunA17_Chr6g0477881 | 26.846 | 596 | 380 | 13 | 190 | 748 | 324 | 900 | 2.80e-71 | 253 |
| Msa1415150 | MtrunA17_Chr6g0477921 | 26.846 | 596 | 380 | 13 | 190 | 748 | 324 | 900 | 3.20e-71 | 253 |
| Msa1415150 | MtrunA17_Chr8g0373261 | 27.692 | 585 | 377 | 14 | 188 | 747 | 323 | 886 | 8.23e-62 | 224 |
| Msa1415150 | MtrunA17_Chr3g0081981 | 26.335 | 562 | 359 | 14 | 225 | 748 | 3 | 547 | 1.98e-61 | 219 |
| Msa1415150 | MtrunA17_Chr6g0455001 | 28.469 | 418 | 253 | 11 | 363 | 748 | 1 | 404 | 1.26e-50 | 182 |
| Msa1415150 | MtrunA17_Chr1g0154181 | 25.556 | 630 | 413 | 18 | 155 | 747 | 46 | 656 | 3.75e-48 | 181 |
| Msa1415150 | MtrunA17_Chr8g0338961 | 32.231 | 242 | 148 | 4 | 188 | 421 | 276 | 509 | 7.89e-32 | 130 |
| Msa1415150 | MtrunA17_Chr4g0033901 | 28.431 | 306 | 187 | 8 | 135 | 425 | 9 | 297 | 9.13e-31 | 122 |
| Msa1415150 | MtrunA17_Chr7g0231781 | 30.000 | 230 | 150 | 3 | 294 | 518 | 3 | 226 | 8.04e-30 | 118 |
| Msa1415150 | MtrunA17_Chr2g0329971 | 32.057 | 209 | 120 | 6 | 271 | 459 | 5 | 211 | 2.24e-27 | 110 |
| Msa1415150 | MtrunA17_Chr2g0303051 | 34.711 | 121 | 79 | 0 | 356 | 476 | 24 | 144 | 4.77e-21 | 90.5 |
| Msa1415150 | MtrunA17_Chr5g0413371 | 33.333 | 156 | 101 | 2 | 190 | 344 | 390 | 543 | 1.29e-18 | 90.5 |
| Msa1415150 | MtrunA17_Chr1g0211111 | 29.592 | 196 | 121 | 4 | 566 | 748 | 1 | 192 | 6.85e-15 | 78.2 |
| Msa1415150 | MtrunA17_Chr2g0278781 | 28.676 | 136 | 82 | 3 | 624 | 748 | 44 | 175 | 5.54e-14 | 71.6 |
| Msa1415150 | MtrunA17_Chr5g0404701 | 23.563 | 174 | 128 | 3 | 504 | 672 | 4 | 177 | 9.82e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1415150 | AT3G05850.1 | 57.867 | 769 | 296 | 7 | 7 | 748 | 4 | 771 | 0.0 | 885 |
| Msa1415150 | AT1G06740.1 | 35.195 | 591 | 356 | 10 | 175 | 747 | 141 | 722 | 7.94e-123 | 384 |
| Msa1415150 | AT1G64260.2 | 22.598 | 739 | 520 | 18 | 4 | 715 | 5 | 718 | 2.71e-40 | 159 |
| Msa1415150 | AT1G64260.1 | 22.598 | 739 | 520 | 18 | 4 | 715 | 5 | 718 | 2.71e-40 | 159 |
| Msa1415150 | AT1G49920.2 | 23.218 | 547 | 354 | 14 | 190 | 690 | 186 | 712 | 3.97e-33 | 137 |
| Msa1415150 | AT1G49920.1 | 23.218 | 547 | 354 | 14 | 190 | 690 | 186 | 712 | 3.97e-33 | 137 |
| Msa1415150 | AT1G64255.1 | 24.691 | 486 | 335 | 12 | 224 | 690 | 232 | 705 | 8.25e-30 | 126 |
| Msa1415150 | AT5G15685.1 | 29.839 | 248 | 165 | 5 | 190 | 432 | 183 | 426 | 7.26e-29 | 121 |
| Msa1415150 | AT1G64253.1 | 23.145 | 337 | 235 | 8 | 392 | 715 | 2 | 327 | 1.74e-19 | 92.0 |
| Msa1415150 | AT1G64253.2 | 23.629 | 237 | 169 | 5 | 487 | 715 | 19 | 251 | 9.15e-11 | 64.3 |
Find 191 sgRNAs with CRISPR-Local
Find 385 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATCTTATGACATCAAATTT+TGG | 0.113475 | tig0024176:-25286 | Msa1415150:CDS |
| CCTGCACAATCTCTTTGTTC+TGG | 0.154930 | tig0024176:-26432 | Msa1415150:CDS |
| TCAATGGCTGCTACATTAAT+AGG | 0.174196 | tig0024176:+26504 | None:intergenic |
| GATTCAACCTGCTTTGATTT+TGG | 0.203125 | tig0024176:+24758 | None:intergenic |
| GATATCCTTTGGCCTGTAAT+TGG | 0.220676 | tig0024176:+26056 | None:intergenic |
| CAAACTGAACAAGGACTTAA+AGG | 0.227894 | tig0024176:-25497 | Msa1415150:CDS |
| CTGCACAATCTCTTTGTTCT+GGG | 0.229547 | tig0024176:-26431 | Msa1415150:CDS |
| TATCCTCCATTCTGCCCTTT+AGG | 0.244797 | tig0024176:-28467 | Msa1415150:intron |
| AAATTGTTGATATTGATAAT+TGG | 0.248753 | tig0024176:-25024 | Msa1415150:CDS |
| CGTAGTATTGAGAATATAAA+AGG | 0.273452 | tig0024176:-25391 | Msa1415150:CDS |
| ATTGAAGCTGACGTTTAATT+AGG | 0.286176 | tig0024176:+24729 | None:intergenic |
| TCTTTGACGCTTGTCATCAT+TGG | 0.287688 | tig0024176:+26407 | None:intergenic |
| AAGTAGGAAGCACGTGAATT+TGG | 0.292310 | tig0024176:+22904 | None:intergenic |
| CGCTAAAACTATTAAACCTT+TGG | 0.299997 | tig0024176:+26346 | None:intergenic |
| TCATTTCATGCCTCAATAAC+TGG | 0.305262 | tig0024176:-25823 | Msa1415150:CDS |
| TGAAAGCTTCACCCAATTAC+AGG | 0.306875 | tig0024176:-26068 | Msa1415150:CDS |
| AAAGTATCAAGGGGAATTAT+TGG | 0.307157 | tig0024176:-25746 | Msa1415150:CDS |
| AATGAAGCAAGATGCAAATA+TGG | 0.313394 | tig0024176:-22971 | Msa1415150:three_prime_UTR |
| CAACTGGCATTGGTTTCTTC+AGG | 0.314648 | tig0024176:-25650 | Msa1415150:CDS |
| GACGACATAAAGCGCGAGTA+TGG | 0.321301 | tig0024176:-26030 | Msa1415150:CDS |
| AAATTTAAATAACTAGAAAA+TGG | 0.324116 | tig0024176:+22745 | None:intergenic |
| ATGCCTCAATAACTGGTTTC+CGG | 0.324519 | tig0024176:-25816 | Msa1415150:CDS |
| ACATCAATCATTTGAGTGAT+TGG | 0.329504 | tig0024176:+25223 | None:intergenic |
| ATGCCAGTTGTCTTCAGTTT+CGG | 0.342179 | tig0024176:+25663 | None:intergenic |
| GAGCGTCTGATGTTTCCTTT+TGG | 0.342716 | tig0024176:+25107 | None:intergenic |
| TACATTGCAATTGAAGGTTT+CGG | 0.348044 | tig0024176:+27906 | None:intergenic |
| ATGACCCAGTTGTATGCTTC+AGG | 0.348916 | tig0024176:+25361 | None:intergenic |
| AGTTATTTAAATTTATTGAT+TGG | 0.349918 | tig0024176:-22736 | Msa1415150:three_prime_UTR |
| CAACGGATGGTTAGTTTCCT+TGG | 0.350493 | tig0024176:-27808 | Msa1415150:CDS |
| TCATGAGGCCAGACGTTTCA+TGG | 0.355335 | tig0024176:-25464 | Msa1415150:CDS |
| AATTACTTCATCTGGCAAAC+TGG | 0.357816 | tig0024176:-22813 | Msa1415150:three_prime_UTR |
| CATTAATCTGGTCATGCAAT+TGG | 0.362200 | tig0024176:+22574 | None:intergenic |
| AGGCATGAAATGATACAAAA+AGG | 0.364107 | tig0024176:+25833 | None:intergenic |
| GGAGAGGGCGACAGGCTTGC+CGG | 0.366956 | tig0024176:+25797 | None:intergenic |
| TGCAAGGGATGGAAACTTAC+TGG | 0.367103 | tig0024176:-24992 | Msa1415150:CDS |
| AAGATAAAAGAGACTAATCC+TGG | 0.383049 | tig0024176:-25901 | Msa1415150:CDS |
| TGGACTGGTTTGTCAATATC+TGG | 0.384054 | tig0024176:+24845 | None:intergenic |
| AATTGTTGATATTGATAATT+GGG | 0.386007 | tig0024176:-25023 | Msa1415150:CDS |
| AACATCAAGTACTTCCTTCC+TGG | 0.387501 | tig0024176:-27874 | Msa1415150:CDS |
| AGAAGTTAGTTTCTCCTAGT+TGG | 0.388614 | tig0024176:-22660 | Msa1415150:three_prime_UTR |
| ATGTCGTCTGCGATATCCTT+TGG | 0.391266 | tig0024176:+26045 | None:intergenic |
| AGAGAACAAATTACTTCATC+TGG | 0.399393 | tig0024176:-22821 | Msa1415150:three_prime_UTR |
| GAGAAATTGAGCTCTTTCAT+TGG | 0.406468 | tig0024176:-28500 | Msa1415150:five_prime_UTR |
| ATCAGTTAGTTATTGTTATC+CGG | 0.408822 | tig0024176:-22845 | Msa1415150:three_prime_UTR |
| TTTATCTTCTCACAAAAGAA+TGG | 0.413555 | tig0024176:+25916 | None:intergenic |
| TTTCTCCTGAAGCATACAAC+TGG | 0.416731 | tig0024176:-25366 | Msa1415150:CDS |
| ATATCCTTTGGCCTGTAATT+GGG | 0.438933 | tig0024176:+26057 | None:intergenic |
| TGGATAATTTCCTCCTTGGA+TGG | 0.440016 | tig0024176:+25127 | None:intergenic |
| GTCAAAGAGCGGCACAGCAG+TGG | 0.447669 | tig0024176:-26392 | Msa1415150:CDS |
| CTTTGTAGCTGTAGCAGCCA+TGG | 0.451242 | tig0024176:+28065 | None:intergenic |
| TGCGGTAAATGCAAGGGACT+TGG | 0.451657 | tig0024176:-24707 | Msa1415150:CDS |
| GGTGCTTACATTGCAATTGA+AGG | 0.452249 | tig0024176:+27900 | None:intergenic |
| GAATTTGTAACCAACATAGA+TGG | 0.452851 | tig0024176:-28012 | Msa1415150:CDS |
| CAATGGCTGCTACATTAATA+GGG | 0.455291 | tig0024176:+26505 | None:intergenic |
| AATGCATTGGACCAGTGCTC+TGG | 0.455861 | tig0024176:+25328 | None:intergenic |
| AAAGAATACTGTCAAGGAAA+AGG | 0.457231 | tig0024176:+25776 | None:intergenic |
| GAAGGATCTGCTGTCAAAGC+TGG | 0.459403 | tig0024176:-26138 | Msa1415150:CDS |
| CATAAATACTCCATTGCTCA+TGG | 0.463415 | tig0024176:-26306 | Msa1415150:CDS |
| AAGCTAACTAATCTCTAAGT+AGG | 0.464644 | tig0024176:+22888 | None:intergenic |
| AAGGAAGTACTTGATGTTCA+TGG | 0.465370 | tig0024176:+27879 | None:intergenic |
| ATGCCTCTTTATAAGAGCCT+TGG | 0.465522 | tig0024176:+25950 | None:intergenic |
| AATGCATTGCTCAGCATCAA+TGG | 0.471564 | tig0024176:+26488 | None:intergenic |
| CTGTCTTTGAATGTGTTGGT+AGG | 0.475394 | tig0024176:-24946 | Msa1415150:CDS |
| ATCATTAACCATGAAACGTC+TGG | 0.476096 | tig0024176:+25456 | None:intergenic |
| ATATCTGGCAGAGCGTGAAT+TGG | 0.476248 | tig0024176:+24860 | None:intergenic |
| GCAAGGGACTTGGCCACAAT+CGG | 0.477266 | tig0024176:-24697 | Msa1415150:CDS |
| TATTTAAATTTATTGATTGG+TGG | 0.479127 | tig0024176:-22733 | Msa1415150:three_prime_UTR |
| TGCAACATTCACGACAAAAG+AGG | 0.481312 | tig0024176:-25872 | Msa1415150:CDS |
| AAACTGAACAAGGACTTAAA+GGG | 0.481927 | tig0024176:-25496 | Msa1415150:CDS |
| ATAACAGAAACACATTAATC+TGG | 0.482266 | tig0024176:+22562 | None:intergenic |
| AAGGAAAAGGAGAGGGCGAC+AGG | 0.485747 | tig0024176:+25789 | None:intergenic |
| TGAAGTAATTTGTTCTCTAC+CGG | 0.486918 | tig0024176:+22826 | None:intergenic |
| GTAAATCTCAAGGCTGTCCC+TGG | 0.488941 | tig0024176:-26233 | Msa1415150:CDS |
| ATGCCGAAACTGAAGACAAC+TGG | 0.490063 | tig0024176:-25666 | Msa1415150:CDS |
| TCCTTCACAAGTATGATCTC+TGG | 0.490803 | tig0024176:+26155 | None:intergenic |
| CAAGGAGGAAATTATCCAAA+AGG | 0.490970 | tig0024176:-25122 | Msa1415150:CDS |
| AGTTAGTTTCTCCTAGTTGG+AGG | 0.492271 | tig0024176:-22657 | Msa1415150:three_prime_UTR |
| AATTCTCAACTGTGAAGTAT+CGG | 0.493598 | tig0024176:+24903 | None:intergenic |
| TTATGCAATTGACATTGATC+AGG | 0.494241 | tig0024176:-27962 | Msa1415150:CDS |
| AGAAGAGAGAGAAACCTAAA+GGG | 0.495713 | tig0024176:+28453 | None:intergenic |
| CGACCAGGAGGACGCTTAGT+TGG | 0.496692 | tig0024176:+24782 | None:intergenic |
| TGGTCCAATGCATTCTTCAA+TGG | 0.497526 | tig0024176:-25319 | Msa1415150:CDS |
| ATTGCTGTCTTTGAATGTGT+TGG | 0.497680 | tig0024176:-24950 | Msa1415150:CDS |
| CTTTGACGCATATATTCTCC+AGG | 0.498153 | tig0024176:+26215 | None:intergenic |
| TGCTGCTTACGCATCCAAAC+CGG | 0.499342 | tig0024176:-25425 | Msa1415150:CDS |
| CATCCAACATGCCTGCTAGT+AGG | 0.501700 | tig0024176:-27729 | Msa1415150:intron |
| ATATTTGAAAACTGCTACCA+CGG | 0.502913 | tig0024176:-25544 | Msa1415150:CDS |
| CAAACCAGTCCAGGTTGAAT+CGG | 0.503060 | tig0024176:-24834 | Msa1415150:CDS |
| GTTTGCACGTCTTCCGATTG+TGG | 0.503969 | tig0024176:+24684 | None:intergenic |
| ATTCTCAACTGTGAAGTATC+GGG | 0.507704 | tig0024176:+24904 | None:intergenic |
| GGTATCGAGCGACTAGAGGT+TGG | 0.509333 | tig0024176:-26116 | Msa1415150:CDS |
| CTTCCATAGCCGATTCAACC+TGG | 0.511413 | tig0024176:+24825 | None:intergenic |
| ATCAGACGCTCGCTCACTAC+AGG | 0.514275 | tig0024176:-25095 | Msa1415150:CDS |
| CCAGAACAAAGAGATTGTGC+AGG | 0.515447 | tig0024176:+26432 | None:intergenic |
| TACGTTGTCGTGGTCATCGT+AGG | 0.516513 | tig0024176:-28541 | Msa1415150:five_prime_UTR |
| CATTACAGTGTCGAAAGATA+AGG | 0.518292 | tig0024176:-27836 | Msa1415150:CDS |
| TCAAAGAGCGGCACAGCAGT+GGG | 0.518340 | tig0024176:-26391 | Msa1415150:CDS |
| CCTTGTTCAGTTTGTCAGCA+AGG | 0.518369 | tig0024176:+25506 | None:intergenic |
| ATCGGGAACAATAATCATAT+AGG | 0.518434 | tig0024176:+24921 | None:intergenic |
| GTATCGAGCGACTAGAGGTT+GGG | 0.520425 | tig0024176:-26115 | Msa1415150:CDS |
| TGCTCCATTGAAGAATGCAT+TGG | 0.520736 | tig0024176:+25315 | None:intergenic |
| TGCACAATCTCTTTGTTCTG+GGG | 0.521328 | tig0024176:-26430 | Msa1415150:CDS |
| TTGAGCTCTTTCATTGGTGA+CGG | 0.521692 | tig0024176:-28494 | Msa1415150:five_prime_UTR |
| TCTACAACAGCAAAGGCTAC+AGG | 0.521980 | tig0024176:+25688 | None:intergenic |
| AAACTGAAGACAACTGGCAT+TGG | 0.522078 | tig0024176:-25660 | Msa1415150:CDS |
| AGTTAAATTATTCTCAAGCA+TGG | 0.524598 | tig0024176:-26002 | Msa1415150:CDS |
| CCAGGAGGACGCTTAGTTGG+TGG | 0.525231 | tig0024176:+24785 | None:intergenic |
| GAGAAACCTAAAGGGCAGAA+TGG | 0.530957 | tig0024176:+28461 | None:intergenic |
| ACGACATAAAGCGCGAGTAT+GGG | 0.531442 | tig0024176:-26029 | Msa1415150:CDS |
| TGTCTTTGAATGTGTTGGTA+GGG | 0.532718 | tig0024176:-24945 | Msa1415150:CDS |
| AACAATTAGCACACGACGAG+AGG | 0.534057 | tig0024176:-25179 | Msa1415150:CDS |
| GTGAATAACTACCTACTAGC+AGG | 0.540396 | tig0024176:+27718 | None:intergenic |
| TTGCCGGAAACCAGTTATTG+AGG | 0.542162 | tig0024176:+25813 | None:intergenic |
| TTGGCTGCAACTTCTGTCGA+TGG | 0.542172 | tig0024176:-25727 | Msa1415150:CDS |
| CCACCAACTAAGCGTCCTCC+TGG | 0.542401 | tig0024176:-24785 | Msa1415150:CDS |
| AGATAAGGATTTGCAACGGA+TGG | 0.544534 | tig0024176:-27821 | Msa1415150:CDS |
| CAGTGGGAAAATACCATCAC+TGG | 0.547435 | tig0024176:-26375 | Msa1415150:CDS |
| ACATTAATAGGGATAACAAC+AGG | 0.549105 | tig0024176:+26516 | None:intergenic |
| AGTCCAGGTTGAATCGGCTA+TGG | 0.549247 | tig0024176:-24828 | Msa1415150:CDS |
| ATAGCCGATTCAACCTGGAC+TGG | 0.549788 | tig0024176:+24830 | None:intergenic |
| GAGGACGCTTAGTTGGTGGA+GGG | 0.559572 | tig0024176:+24789 | None:intergenic |
| GCTTCAATGCGGTAAATGCA+AGG | 0.559948 | tig0024176:-24714 | Msa1415150:CDS |
| CCTTGCTGACAAACTGAACA+AGG | 0.563477 | tig0024176:-25506 | Msa1415150:CDS |
| AGATATTGACAAACCAGTCC+AGG | 0.565631 | tig0024176:-24843 | Msa1415150:CDS |
| ACTCCAAGGCTCTTATAAAG+AGG | 0.566265 | tig0024176:-25953 | Msa1415150:CDS |
| ACCAGAGATCATACTTGTGA+AGG | 0.566536 | tig0024176:-26156 | Msa1415150:CDS |
| GTGAATGTTGCAAAACTCCC+AGG | 0.568807 | tig0024176:+25883 | None:intergenic |
| TACATCTGGTGCCTCCAACT+AGG | 0.572112 | tig0024176:+22646 | None:intergenic |
| CAATAGCATGGCAGCAAGGA+AGG | 0.574571 | tig0024176:+24969 | None:intergenic |
| ACTTCTGTCGATGGAAATGA+TGG | 0.575330 | tig0024176:-25718 | Msa1415150:CDS |
| GGAGGACGCTTAGTTGGTGG+AGG | 0.576697 | tig0024176:+24788 | None:intergenic |
| TACAAAGTGAGCCAGAGCAC+TGG | 0.579145 | tig0024176:-25339 | Msa1415150:CDS |
| CTACAGGTGTTGCTTTCACA+AGG | 0.581162 | tig0024176:-25079 | Msa1415150:CDS |
| AACAAAATTGACACCATCCA+AGG | 0.581806 | tig0024176:-25140 | Msa1415150:CDS |
| TAATTGGGATTGTAGCTGCA+AGG | 0.582427 | tig0024176:-25008 | Msa1415150:CDS |
| AGTATTTATGCAATGCCTCT+CGG | 0.582480 | tig0024176:+26319 | None:intergenic |
| TGGTCGGCCAAAATCAAAGC+AGG | 0.582545 | tig0024176:-24765 | Msa1415150:CDS |
| TAAATGAGGAAGTGGTGGCT+CGG | 0.583268 | tig0024176:-27756 | Msa1415150:CDS |
| AGTTTAAAAGAATACTGTCA+AGG | 0.583589 | tig0024176:+25770 | None:intergenic |
| GTTTGTTATAAATGAGGAAG+TGG | 0.583832 | tig0024176:-27764 | Msa1415150:CDS |
| TTTAAACTCAAAGTATCAAG+GGG | 0.584199 | tig0024176:-25755 | Msa1415150:CDS |
| ACGTTGTCGTGGTCATCGTA+GGG | 0.588435 | tig0024176:-28540 | Msa1415150:five_prime_UTR |
| AGATAAAAGAGACTAATCCT+GGG | 0.595650 | tig0024176:-25900 | Msa1415150:CDS |
| CGAGCGACTAGAGGTTGGGT+GGG | 0.595820 | tig0024176:-26111 | Msa1415150:CDS |
| GACGAGAGGAGTCTAATCAA+TGG | 0.596180 | tig0024176:-25165 | Msa1415150:CDS |
| TGATGTGTTTGTTATAAATG+AGG | 0.598386 | tig0024176:-27770 | Msa1415150:CDS |
| GTAAGCAAAACCATGAGCAA+TGG | 0.599165 | tig0024176:+26296 | None:intergenic |
| ACGGTCAAATGTAAATCTCA+AGG | 0.600516 | tig0024176:-26243 | Msa1415150:CDS |
| CCTTTGGTCTACACCAGTGA+TGG | 0.601976 | tig0024176:+26362 | None:intergenic |
| AAATGATAGTCATCGGGTCA+CGG | 0.602533 | tig0024176:-26262 | Msa1415150:CDS |
| TCGAGCGACTAGAGGTTGGG+TGG | 0.606801 | tig0024176:-26112 | Msa1415150:CDS |
| CAGAACAAAGAGATTGTGCA+GGG | 0.608579 | tig0024176:+26433 | None:intergenic |
| AAGGATCTGCTGTCAAAGCT+GGG | 0.609887 | tig0024176:-26137 | Msa1415150:CDS |
| GGGATTGTAGCTGCAAGGGA+TGG | 0.612068 | tig0024176:-25003 | Msa1415150:CDS |
| CTACCTACTAGCAGGCATGT+TGG | 0.612141 | tig0024176:+27726 | None:intergenic |
| TACTGTCAAGGAAAAGGAGA+GGG | 0.612619 | tig0024176:+25782 | None:intergenic |
| CAACTAAGCGTCCTCCTGGT+CGG | 0.615992 | tig0024176:-24781 | Msa1415150:CDS |
| TTCGGCATCTACAACAGCAA+AGG | 0.618419 | tig0024176:+25681 | None:intergenic |
| ATAGCTATATGTCAATCAAG+AGG | 0.619889 | tig0024176:-28036 | Msa1415150:CDS |
| GGTACCACATTTGAAGTCTG+TGG | 0.619906 | tig0024176:-25058 | Msa1415150:CDS |
| TGACATTGATCCATCTATGT+TGG | 0.621369 | tig0024176:+28002 | None:intergenic |
| TTCACCCAATTACAGGCCAA+AGG | 0.626468 | tig0024176:-26061 | Msa1415150:CDS |
| CTTCAATGCGGTAAATGCAA+GGG | 0.629621 | tig0024176:-24713 | Msa1415150:CDS |
| GATGGATCAATGTCATACAA+TGG | 0.629781 | tig0024176:-27994 | Msa1415150:CDS |
| AATTGGGATTGTAGCTGCAA+GGG | 0.630644 | tig0024176:-25007 | Msa1415150:CDS |
| CAACAGTGCTAGCATCTCCA+AGG | 0.632215 | tig0024176:+27791 | None:intergenic |
| ACAGCAATAGCATGGCAGCA+AGG | 0.633671 | tig0024176:+24965 | None:intergenic |
| CCATCACTGGTGTAGACCAA+AGG | 0.634322 | tig0024176:-26362 | Msa1415150:CDS |
| TTCTCCTGAAGCATACAACT+GGG | 0.635931 | tig0024176:-25365 | Msa1415150:CDS |
| TGTATTACGAGGTAACATGA+TGG | 0.636401 | tig0024176:-25203 | Msa1415150:CDS |
| AAAGGGACAATTATCTCATG+AGG | 0.640743 | tig0024176:-25479 | Msa1415150:CDS |
| AAACCTAAAGGGCAGAATGG+AGG | 0.643442 | tig0024176:+28464 | None:intergenic |
| ATTGCTAGAGAGCAACTCCA+AGG | 0.645401 | tig0024176:-25967 | Msa1415150:CDS |
| ATGCATTCTTCAATGGAGCA+AGG | 0.649814 | tig0024176:-25312 | Msa1415150:CDS |
| ATTCAAAGACAGCAATAGCA+TGG | 0.650011 | tig0024176:+24957 | None:intergenic |
| TGTTATAAATGAGGAAGTGG+TGG | 0.650228 | tig0024176:-27761 | Msa1415150:CDS |
| AGACAGGAAATACGTTGTCG+TGG | 0.657358 | tig0024176:-28551 | Msa1415150:five_prime_UTR |
| CTTGATGCAAATCAACTGAG+TGG | 0.664605 | tig0024176:+26185 | None:intergenic |
| AGGACGCTTAGTTGGTGGAG+GGG | 0.666771 | tig0024176:+24790 | None:intergenic |
| TTGTCCACAGACTTCAAATG+TGG | 0.667756 | tig0024176:+25054 | None:intergenic |
| TGATGACAAGCGTCAAAGAG+CGG | 0.668148 | tig0024176:-26403 | Msa1415150:CDS |
| CGAAAGATAAGGATTTGCAA+CGG | 0.672160 | tig0024176:-27825 | Msa1415150:CDS |
| CAAATGATTGATGTATTACG+AGG | 0.686709 | tig0024176:-25214 | Msa1415150:CDS |
| TTTGACGCATATATTCTCCA+GGG | 0.695094 | tig0024176:+26216 | None:intergenic |
| ATACTGTCAAGGAAAAGGAG+AGG | 0.711175 | tig0024176:+25781 | None:intergenic |
| AAAATTGACACCATCCAAGG+AGG | 0.714232 | tig0024176:-25137 | Msa1415150:CDS |
| GGTGACGTAAACAATAGCCG+TGG | 0.719816 | tig0024176:+25527 | None:intergenic |
| GGATCAATGTCATACAATGG+TGG | 0.721707 | tig0024176:-27991 | Msa1415150:CDS |
| ATTAAACGTCAGCTTCAATG+CGG | 0.724013 | tig0024176:-24725 | Msa1415150:CDS |
| AGAACAAAGAGATTGTGCAG+GGG | 0.737676 | tig0024176:+26434 | None:intergenic |
| TATTGATTGGTGGATCACTG+CGG | 0.741849 | tig0024176:-22723 | Msa1415150:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATATAT+AGG | - | tig0024176:26495-26514 | Msa1415150:CDS | 0.0% |
| !!! | TTAAGTTTTTATCAAAAATA+GGG | + | tig0024176:24294-24313 | None:intergenic | 10.0% |
| !!! | ATTAAGTTTTTATCAAAAAT+AGG | + | tig0024176:24295-24314 | None:intergenic | 10.0% |
| !! | ATATATATATATATATAGGA+AGG | - | tig0024176:26519-26538 | Msa1415150:CDS | 10.0% |
| !!! | TTATTAATTGTTTTGTTATT+TGG | + | tig0024176:26883-26902 | None:intergenic | 10.0% |
| !!! | TTTTTTTAATTTCATATAAG+TGG | + | tig0024176:27161-27180 | None:intergenic | 10.0% |
| !! | TTGAATAATAATAATTGTTA+GGG | + | tig0024176:27407-27426 | None:intergenic | 10.0% |
| !! | ATTGAATAATAATAATTGTT+AGG | + | tig0024176:27408-27427 | None:intergenic | 10.0% |
| !! | AAATTTAAATAACTAGAAAA+TGG | + | tig0024176:28375-28394 | None:intergenic | 10.0% |
| !! | AGTTATTTAAATTTATTGAT+TGG | - | tig0024176:28381-28400 | Msa1415150:intron | 10.0% |
| !! | AGATATCATATAGTTTAAAT+TGG | - | tig0024176:23481-23500 | Msa1415150:intron | 15.0% |
| !!! | GATATTTTTACAATTATACA+GGG | + | tig0024176:23939-23958 | None:intergenic | 15.0% |
| !!! | AGATATTTTTACAATTATAC+AGG | + | tig0024176:23940-23959 | None:intergenic | 15.0% |
| !!! | TTTATTTTATCTTTTGTTGA+AGG | + | tig0024176:24341-24360 | None:intergenic | 15.0% |
| !! | AAAAGATATGAATCTAAATT+GGG | + | tig0024176:24501-24520 | None:intergenic | 15.0% |
| !! | TAAAAGATATGAATCTAAAT+TGG | + | tig0024176:24502-24521 | None:intergenic | 15.0% |
| !! | ATAAAAAAAATGATAGTCAT+CGG | - | tig0024176:24848-24867 | Msa1415150:CDS | 15.0% |
| !!! | AAATTGTTGATATTGATAAT+TGG | - | tig0024176:26093-26112 | Msa1415150:CDS | 15.0% |
| !!! | AATTGTTGATATTGATAATT+GGG | - | tig0024176:26094-26113 | Msa1415150:CDS | 15.0% |
| !! | TTGATTGATATTAGAATTAA+TGG | + | tig0024176:26592-26611 | None:intergenic | 15.0% |
| !! | TTAATTCTAATATCAATCAA+TGG | - | tig0024176:26592-26611 | Msa1415150:intron | 15.0% |
| !!! | TTAAAAAGGAAATTTTATCT+TGG | - | tig0024176:26675-26694 | Msa1415150:intron | 15.0% |
| !!! | TAAAAAGGAAATTTTATCTT+GGG | - | tig0024176:26676-26695 | Msa1415150:intron | 15.0% |
| !! | CCATATCAATTATTAATAAT+GGG | + | tig0024176:26817-26836 | None:intergenic | 15.0% |
| !! | ACCATATCAATTATTAATAA+TGG | + | tig0024176:26818-26837 | None:intergenic | 15.0% |
| !! | TTAATTGATATTGGAATTAA+AGG | - | tig0024176:27436-27455 | Msa1415150:intron | 15.0% |
| !!! | TATTTAAATTTATTGATTGG+TGG | - | tig0024176:28384-28403 | Msa1415150:intron | 15.0% |
| !!! | CATATCATGAATATTTTTTT+GGG | + | tig0024176:28511-28530 | None:intergenic | 15.0% |
| !! | TAGAACAAATAGAACATAAT+GGG | + | tig0024176:22845-22864 | None:intergenic | 20.0% |
| !! | ATAGAACAAATAGAACATAA+TGG | + | tig0024176:22846-22865 | None:intergenic | 20.0% |
| !! | TCAGAAGTGAAATATAAAAT+GGG | + | tig0024176:22961-22980 | None:intergenic | 20.0% |
| !! | ATCAGAAGTGAAATATAAAA+TGG | + | tig0024176:22962-22981 | None:intergenic | 20.0% |
| !!! | TTTTTGTACTATTACTTGAT+AGG | - | tig0024176:23029-23048 | Msa1415150:intron | 20.0% |
| !!! | TCCTTATGTTCATTTTAATA+TGG | - | tig0024176:23875-23894 | Msa1415150:intron | 20.0% |
| !! | ACCATATTAAAATGAACATA+AGG | + | tig0024176:23879-23898 | None:intergenic | 20.0% |
| !!! | GGAAAATTTTATAGAACATT+TGG | - | tig0024176:24536-24555 | Msa1415150:intron | 20.0% |
| !! | TAAAAAAAATGATAGTCATC+GGG | - | tig0024176:24849-24868 | Msa1415150:CDS | 20.0% |
| !!! | TTTTAAACTCAAAGTATCAA+GGG | - | tig0024176:25361-25380 | Msa1415150:CDS | 20.0% |
| !!! | AATCTTATGACATCAAATTT+TGG | - | tig0024176:25831-25850 | Msa1415150:CDS | 20.0% |
| !!! | ATCTTATGACATCAAATTTT+GGG | - | tig0024176:25832-25851 | Msa1415150:CDS | 20.0% |
| !! | TAGAATTAATGGTTAAGATT+TGG | + | tig0024176:26581-26600 | None:intergenic | 20.0% |
| !!! | ACTTGTTAAGATGTTTAAAA+AGG | - | tig0024176:26661-26680 | Msa1415150:intron | 20.0% |
| !! | CCCATTATTAATAATTGATA+TGG | - | tig0024176:26814-26833 | Msa1415150:intron | 20.0% |
| !!! | TTAATTGTTTTGTTATTTGG+TGG | + | tig0024176:26880-26899 | None:intergenic | 20.0% |
| !! | AAATTGTTGTGATAAAAAAG+TGG | + | tig0024176:26982-27001 | None:intergenic | 20.0% |
| !!! | ATTTTTCAGATCTTTCTTTA+CGG | - | tig0024176:26998-27017 | Msa1415150:intron | 20.0% |
| !!! | TTTTCAGATTTTTCAATTCT+TGG | - | tig0024176:27048-27067 | Msa1415150:intron | 20.0% |
| !!! | TTGACGAAATAAAATCTTTT+TGG | - | tig0024176:27114-27133 | Msa1415150:intron | 20.0% |
| !!! | TGACGAAATAAAATCTTTTT+GGG | - | tig0024176:27115-27134 | Msa1415150:intron | 20.0% |
| !! | ATAACACATCAAAATTGAAA+AGG | + | tig0024176:27350-27369 | None:intergenic | 20.0% |
| !!! | GCATATCATGAATATTTTTT+TGG | + | tig0024176:28512-28531 | None:intergenic | 20.0% |
| ! | ATAACGAATGAAAGAAGAAA+GGG | + | tig0024176:22694-22713 | None:intergenic | 25.0% |
| ! | AATAACGAATGAAAGAAGAA+AGG | + | tig0024176:22695-22714 | None:intergenic | 25.0% |
| ! | TAAAGAGAGGGAAAAAAAAA+AGG | + | tig0024176:22750-22769 | None:intergenic | 25.0% |
| !!! | ATTAAGCGATTTTAAAGAGA+GGG | + | tig0024176:22762-22781 | None:intergenic | 25.0% |
| !!! | AATTAAGCGATTTTAAAGAG+AGG | + | tig0024176:22763-22782 | None:intergenic | 25.0% |
| !!! | TGATGTGTTTGTTATAAATG+AGG | - | tig0024176:23347-23366 | Msa1415150:intron | 25.0% |
| ! | ATGATATCTATCAATAGCAA+AGG | + | tig0024176:23470-23489 | None:intergenic | 25.0% |
| ! | AATAGTCATAATATATGCCA+TGG | + | tig0024176:23820-23839 | None:intergenic | 25.0% |
| ! | TGGCATATATTATGACTATT+CGG | - | tig0024176:23820-23839 | Msa1415150:intron | 25.0% |
| ! | TTATGATGAGATTCACAATT+TGG | - | tig0024176:24125-24144 | Msa1415150:intron | 25.0% |
| ! | TATGATGAGATTCACAATTT+GGG | - | tig0024176:24126-24145 | Msa1415150:intron | 25.0% |
| !! | AATAAGTTGAAAACAGCTTA+TGG | - | tig0024176:24421-24440 | Msa1415150:intron | 25.0% |
| ! | ACTTATTTGATCTTATTGAC+CGG | + | tig0024176:24465-24484 | None:intergenic | 25.0% |
| !! | TCTTTTACATGTGAATTGTT+TGG | - | tig0024176:24515-24534 | Msa1415150:intron | 25.0% |
| ! | AGTTAAATTATTCTCAAGCA+TGG | - | tig0024176:25115-25134 | Msa1415150:CDS | 25.0% |
| ! | TTTATCTTCTCACAAAAGAA+TGG | + | tig0024176:25204-25223 | None:intergenic | 25.0% |
| ! | AGTTTAAAAGAATACTGTCA+AGG | + | tig0024176:25350-25369 | None:intergenic | 25.0% |
| !!! | CTTTTAAACTCAAAGTATCA+AGG | - | tig0024176:25360-25379 | Msa1415150:CDS | 25.0% |
| !! | TTTAAACTCAAAGTATCAAG+GGG | - | tig0024176:25362-25381 | Msa1415150:CDS | 25.0% |
| !! | CGTAGTATTGAGAATATAAA+AGG | - | tig0024176:25726-25745 | Msa1415150:CDS | 25.0% |
| ! | CTAATATCAATCAATGGTTT+AGG | - | tig0024176:26598-26617 | Msa1415150:intron | 25.0% |
| !!! | TGGTTTAGGTTGATTATTAA+TGG | - | tig0024176:26612-26631 | Msa1415150:intron | 25.0% |
| !!! | GGTTTAGGTTGATTATTAAT+GGG | - | tig0024176:26613-26632 | Msa1415150:intron | 25.0% |
| ! | ATTATATGTGTCAATTGAAG+AGG | + | tig0024176:27083-27102 | None:intergenic | 25.0% |
| ! | AATAATAATTGTTAGGGTGA+GGG | + | tig0024176:27401-27420 | None:intergenic | 25.0% |
| ! | TAATAATAATTGTTAGGGTG+AGG | + | tig0024176:27402-27421 | None:intergenic | 25.0% |
| ! | TCCTAGTCATTAATTGATAT+TGG | - | tig0024176:27427-27446 | Msa1415150:intron | 25.0% |
| ! | TCCAATATCAATTAATGACT+AGG | + | tig0024176:27431-27450 | None:intergenic | 25.0% |
| ! | TATATATATATATGCGCACT+AGG | - | tig0024176:27609-27628 | Msa1415150:intron | 25.0% |
| ! | TCAATTGTGCATTAAATAAC+TGG | - | tig0024176:27681-27700 | Msa1415150:intron | 25.0% |
| ! | TGCTACATAGTTAGTTATAT+AGG | - | tig0024176:27821-27840 | Msa1415150:CDS | 25.0% |
| !! | AAATATGGAGAAACGTTTTA+GGG | - | tig0024176:28161-28180 | Msa1415150:intron | 25.0% |
| ! | ATCAGTTAGTTATTGTTATC+CGG | - | tig0024176:28272-28291 | Msa1415150:intron | 25.0% |
| !! | TTTAGATAGATTTTGTGTGT+AGG | - | tig0024176:28340-28359 | Msa1415150:intron | 25.0% |
| ! | ATAACAGAAACACATTAATC+TGG | + | tig0024176:28558-28577 | None:intergenic | 25.0% |
| CTAAACGTGAATAAAAGAGA+GGG | + | tig0024176:22720-22739 | None:intergenic | 30.0% | |
| ! | CTCTCTTTTATTCACGTTTA+GGG | - | tig0024176:22719-22738 | Msa1415150:three_prime_UTR | 30.0% |
| AAAATCGCTTAATTCTCATG+TGG | - | tig0024176:22769-22788 | Msa1415150:three_prime_UTR | 30.0% | |
| AAATCGCTTAATTCTCATGT+GGG | - | tig0024176:22770-22789 | Msa1415150:three_prime_UTR | 30.0% | |
| ATAGCTATATGTCAATCAAG+AGG | - | tig0024176:23081-23100 | Msa1415150:intron | 30.0% | |
| GAATTTGTAACCAACATAGA+TGG | - | tig0024176:23105-23124 | Msa1415150:intron | 30.0% | |
| TTATGCAATTGACATTGATC+AGG | - | tig0024176:23155-23174 | Msa1415150:intron | 30.0% | |
| TACATTGCAATTGAAGGTTT+CGG | + | tig0024176:23214-23233 | None:intergenic | 30.0% | |
| !! | GTTTGTTATAAATGAGGAAG+TGG | - | tig0024176:23353-23372 | Msa1415150:intron | 30.0% |
| ! | TTGAACCATATTTTACAGCA+TGG | - | tig0024176:23569-23588 | Msa1415150:intron | 30.0% |
| GTTAACCATGCTGTAAAATA+TGG | + | tig0024176:23577-23596 | None:intergenic | 30.0% | |
| CAATCGATACAAATATCTAG+TGG | - | tig0024176:23611-23630 | Msa1415150:intron | 30.0% | |
| ! | TCTAATCACATTTTACAGCA+TGG | - | tig0024176:23999-24018 | Msa1415150:intron | 30.0% |
| ATGGAAACAAACGTAAAACA+TGG | + | tig0024176:24194-24213 | None:intergenic | 30.0% | |
| AAGTTATTCTGTAGAGCTTA+TGG | - | tig0024176:24397-24416 | Msa1415150:intron | 30.0% | |
| ATCAAATAAGTCAATCCAAC+TGG | - | tig0024176:24474-24493 | Msa1415150:intron | 30.0% | |
| TCAAATAAGTCAATCCAACT+GGG | - | tig0024176:24475-24494 | Msa1415150:intron | 30.0% | |
| !! | TATAGAACATTTGGTAATGC+AGG | - | tig0024176:24545-24564 | Msa1415150:intron | 30.0% |
| ACATTAATAGGGATAACAAC+AGG | + | tig0024176:24604-24623 | None:intergenic | 30.0% | |
| CGCTAAAACTATTAAACCTT+TGG | + | tig0024176:24774-24793 | None:intergenic | 30.0% | |
| AAGATAAAAGAGACTAATCC+TGG | - | tig0024176:25216-25235 | Msa1415150:CDS | 30.0% | |
| AGATAAAAGAGACTAATCCT+GGG | - | tig0024176:25217-25236 | Msa1415150:CDS | 30.0% | |
| AGGCATGAAATGATACAAAA+AGG | + | tig0024176:25287-25306 | None:intergenic | 30.0% | |
| AAAGAATACTGTCAAGGAAA+AGG | + | tig0024176:25344-25363 | None:intergenic | 30.0% | |
| ! | AAAGTATCAAGGGGAATTAT+TGG | - | tig0024176:25371-25390 | Msa1415150:CDS | 30.0% |
| ! | TTTGTTGCAGATTTTCAGAA+TGG | - | tig0024176:25528-25547 | Msa1415150:CDS | 30.0% |
| ! | TTGTTGCAGATTTTCAGAAT+GGG | - | tig0024176:25529-25548 | Msa1415150:CDS | 30.0% |
| ! | GTTTTCAAATATCTCAGACA+AGG | + | tig0024176:25565-25584 | None:intergenic | 30.0% |
| ATATTTGAAAACTGCTACCA+CGG | - | tig0024176:25573-25592 | Msa1415150:CDS | 30.0% | |
| AAACTGAACAAGGACTTAAA+GGG | - | tig0024176:25621-25640 | Msa1415150:CDS | 30.0% | |
| ATACTACGTTCAAAAATCTC+CGG | + | tig0024176:25714-25733 | None:intergenic | 30.0% | |
| ACATCAATCATTTGAGTGAT+TGG | + | tig0024176:25897-25916 | None:intergenic | 30.0% | |
| CAAATGATTGATGTATTACG+AGG | - | tig0024176:25903-25922 | Msa1415150:CDS | 30.0% | |
| ATCGGGAACAATAATCATAT+AGG | + | tig0024176:26199-26218 | None:intergenic | 30.0% | |
| AATTCTCAACTGTGAAGTAT+CGG | + | tig0024176:26217-26236 | None:intergenic | 30.0% | |
| ATTGAAGCTGACGTTTAATT+AGG | + | tig0024176:26391-26410 | None:intergenic | 30.0% | |
| ! | AGGGATAAATTTTGCAAAAG+AGG | + | tig0024176:26934-26953 | None:intergenic | 30.0% |
| AATAGTCCAAGAATTGAACA+AGG | + | tig0024176:26958-26977 | None:intergenic | 30.0% | |
| ! | CATCCAAAAAAGTTGATTTC+CGG | - | tig0024176:27239-27258 | Msa1415150:intron | 30.0% |
| !!! | ATTCCGGAAATCAACTTTTT+TGG | + | tig0024176:27245-27264 | None:intergenic | 30.0% |
| ! | AAAAAAGTTGATTTCCGGAA+TGG | - | tig0024176:27244-27263 | Msa1415150:intron | 30.0% |
| ! | AGATGCATAATACTGGTTAT+TGG | - | tig0024176:28040-28059 | Msa1415150:CDS | 30.0% |
| ! | GATGCATAATACTGGTTATT+GGG | - | tig0024176:28041-28060 | Msa1415150:CDS | 30.0% |
| AATGAAGCAAGATGCAAATA+TGG | - | tig0024176:28146-28165 | Msa1415150:intron | 30.0% | |
| ! | CAAATATGGAGAAACGTTTT+AGG | - | tig0024176:28160-28179 | Msa1415150:intron | 30.0% |
| ! | AATATGGAGAAACGTTTTAG+GGG | - | tig0024176:28162-28181 | Msa1415150:intron | 30.0% |
| AAGCTAACTAATCTCTAAGT+AGG | + | tig0024176:28232-28251 | None:intergenic | 30.0% | |
| !! | TGAAGTAATTTGTTCTCTAC+CGG | + | tig0024176:28294-28313 | None:intergenic | 30.0% |
| AGAGAACAAATTACTTCATC+TGG | - | tig0024176:28296-28315 | Msa1415150:intron | 30.0% | |
| TCTAAAAACAAAGCTACATC+TGG | + | tig0024176:28488-28507 | None:intergenic | 30.0% | |
| GAGAAATTGAGCTCTTTCAT+TGG | - | tig0024176:22617-22636 | Msa1415150:three_prime_UTR | 35.0% | |
| AGAAGAGAGAGAAACCTAAA+GGG | + | tig0024176:22667-22686 | None:intergenic | 35.0% | |
| AAGAAGAGAGAGAAACCTAA+AGG | + | tig0024176:22668-22687 | None:intergenic | 35.0% | |
| CCTAAACGTGAATAAAAGAG+AGG | + | tig0024176:22721-22740 | None:intergenic | 35.0% | |
| ! | CCTCTCTTTTATTCACGTTT+AGG | - | tig0024176:22718-22737 | Msa1415150:three_prime_UTR | 35.0% |
| ! | TCAACCACACTTCACAATTT+TGG | - | tig0024176:22893-22912 | Msa1415150:three_prime_UTR | 35.0% |
| ! | CAACCACACTTCACAATTTT+GGG | - | tig0024176:22894-22913 | Msa1415150:three_prime_UTR | 35.0% |
| TACTATTACTTGATAGGCCA+TGG | - | tig0024176:23035-23054 | Msa1415150:intron | 35.0% | |
| TGACATTGATCCATCTATGT+TGG | + | tig0024176:23118-23137 | None:intergenic | 35.0% | |
| GATGGATCAATGTCATACAA+TGG | - | tig0024176:23123-23142 | Msa1415150:intron | 35.0% | |
| !! | AAGGAAGTACTTGATGTTCA+TGG | + | tig0024176:23241-23260 | None:intergenic | 35.0% |
| ! | CATTACAGTGTCGAAAGATA+AGG | - | tig0024176:23281-23300 | Msa1415150:intron | 35.0% |
| CGAAAGATAAGGATTTGCAA+CGG | - | tig0024176:23292-23311 | Msa1415150:intron | 35.0% | |
| TGTTATAAATGAGGAAGTGG+TGG | - | tig0024176:23356-23375 | Msa1415150:intron | 35.0% | |
| CAGGGATTCATCTTCAAAAT+AGG | + | tig0024176:23643-23662 | None:intergenic | 35.0% | |
| AATGAACCAAGACTCAAACA+GGG | + | tig0024176:23661-23680 | None:intergenic | 35.0% | |
| TAATGAACCAAGACTCAAAC+AGG | + | tig0024176:23662-23681 | None:intergenic | 35.0% | |
| CTGTGATGTGATTCACAATT+CGG | - | tig0024176:23699-23718 | Msa1415150:intron | 35.0% | |
| TGATTCACAATTCGGAAAGT+AGG | - | tig0024176:23707-23726 | Msa1415150:intron | 35.0% | |
| ! | CATGTTTTACAGTTGTCATC+CGG | - | tig0024176:23766-23785 | Msa1415150:intron | 35.0% |
| ATGGTTGTGACCAAAATGAA+TGG | - | tig0024176:23794-23813 | Msa1415150:intron | 35.0% | |
| ATGATGTCTATCGATAGCAA+AGG | + | tig0024176:23903-23922 | None:intergenic | 35.0% | |
| AGATTCACAATTTGGGAAGT+AGG | - | tig0024176:24133-24152 | Msa1415150:intron | 35.0% | |
| ! | ACGTAGGTCGGATTTTTATA+TGG | + | tig0024176:24213-24232 | None:intergenic | 35.0% |
| ! | TATGCTATGGCCATTCATTT+TGG | + | tig0024176:24258-24277 | None:intergenic | 35.0% |
| CCAATGTCTAACATATGCTA+TGG | + | tig0024176:24271-24290 | None:intergenic | 35.0% | |
| CCATAGCATATGTTAGACAT+TGG | - | tig0024176:24268-24287 | Msa1415150:intron | 35.0% | |
| CAATGGCTGCTACATTAATA+GGG | + | tig0024176:24615-24634 | None:intergenic | 35.0% | |
| TCAATGGCTGCTACATTAAT+AGG | + | tig0024176:24616-24635 | None:intergenic | 35.0% | |
| AGTATTTATGCAATGCCTCT+CGG | + | tig0024176:24801-24820 | None:intergenic | 35.0% | |
| CATAAATACTCCATTGCTCA+TGG | - | tig0024176:24811-24830 | Msa1415150:CDS | 35.0% | |
| ACGGTCAAATGTAAATCTCA+AGG | - | tig0024176:24874-24893 | Msa1415150:CDS | 35.0% | |
| TTTGACGCATATATTCTCCA+GGG | + | tig0024176:24904-24923 | None:intergenic | 35.0% | |
| ATATCCTTTGGCCTGTAATT+GGG | + | tig0024176:25063-25082 | None:intergenic | 35.0% | |
| GAAATGATACAAAAAGGCGA+TGG | + | tig0024176:25281-25300 | None:intergenic | 35.0% | |
| TCATTTCATGCCTCAATAAC+TGG | - | tig0024176:25294-25313 | Msa1415150:CDS | 35.0% | |
| CAAACTGAACAAGGACTTAA+AGG | - | tig0024176:25620-25639 | Msa1415150:CDS | 35.0% | |
| AAAGGGACAATTATCTCATG+AGG | - | tig0024176:25638-25657 | Msa1415150:CDS | 35.0% | |
| ATCATTAACCATGAAACGTC+TGG | + | tig0024176:25664-25683 | None:intergenic | 35.0% | |
| ! | TTGGGCAGCAATTTTATTGT+TGG | - | tig0024176:25850-25869 | Msa1415150:CDS | 35.0% |
| ! | TGGGCAGCAATTTTATTGTT+GGG | - | tig0024176:25851-25870 | Msa1415150:CDS | 35.0% |
| ! | ATTTTATTGTTGGGTGTCAG+AGG | - | tig0024176:25860-25879 | Msa1415150:CDS | 35.0% |
| TGTATTACGAGGTAACATGA+TGG | - | tig0024176:25914-25933 | Msa1415150:CDS | 35.0% | |
| AACAAAATTGACACCATCCA+AGG | - | tig0024176:25977-25996 | Msa1415150:CDS | 35.0% | |
| ! | CTTTTGGATAATTTCCTCCT+TGG | + | tig0024176:25997-26016 | None:intergenic | 35.0% |
| CAAGGAGGAAATTATCCAAA+AGG | - | tig0024176:25995-26014 | Msa1415150:CDS | 35.0% | |
| ATTCAAAGACAGCAATAGCA+TGG | + | tig0024176:26163-26182 | None:intergenic | 35.0% | |
| ATTGCTGTCTTTGAATGTGT+TGG | - | tig0024176:26167-26186 | Msa1415150:CDS | 35.0% | |
| ! | TGTCTTTGAATGTGTTGGTA+GGG | - | tig0024176:26172-26191 | Msa1415150:CDS | 35.0% |
| ! | ATTCTCAACTGTGAAGTATC+GGG | + | tig0024176:26216-26235 | None:intergenic | 35.0% |
| !! | GATTCAACCTGCTTTGATTT+TGG | + | tig0024176:26362-26381 | None:intergenic | 35.0% |
| ATTAAACGTCAGCTTCAATG+CGG | - | tig0024176:26392-26411 | Msa1415150:CDS | 35.0% | |
| AAATGTTAACAAGTGCCCTT+GGG | - | tig0024176:26636-26655 | Msa1415150:intron | 35.0% | |
| TCCAAGAATTGAACAAGGAA+GGG | + | tig0024176:26953-26972 | None:intergenic | 35.0% | |
| ! | GATGATGATGATGATGATGA+TGG | - | tig0024176:27298-27317 | Msa1415150:intron | 35.0% |
| ! | GGTTAAATCGTTTTCTCTAC+TGG | + | tig0024176:27380-27399 | None:intergenic | 35.0% |
| CAAGAGTAAGTCTATAGACT+AGG | + | tig0024176:27484-27503 | None:intergenic | 35.0% | |
| CTAGTCTATAGACTTACTCT+TGG | - | tig0024176:27482-27501 | Msa1415150:intron | 35.0% | |
| TGAAAATATGCACACACAAC+TGG | + | tig0024176:27658-27677 | None:intergenic | 35.0% | |
| TATCCTCACTAGAGTTCAAA+TGG | + | tig0024176:27851-27870 | None:intergenic | 35.0% | |
| GAATGTCTTATACGAAGACA+TGG | + | tig0024176:27927-27946 | None:intergenic | 35.0% | |
| TTATGCATCTACAGACTACA+TGG | + | tig0024176:28030-28049 | None:intergenic | 35.0% | |
| AGTCTGTAGATGCATAATAC+TGG | - | tig0024176:28033-28052 | Msa1415150:CDS | 35.0% | |
| AATTACTTCATCTGGCAAAC+TGG | - | tig0024176:28304-28323 | Msa1415150:intron | 35.0% | |
| ! | AGAAGTTAGTTTCTCCTAGT+TGG | - | tig0024176:28457-28476 | Msa1415150:intron | 35.0% |
| CATTAATCTGGTCATGCAAT+TGG | + | tig0024176:28546-28565 | None:intergenic | 35.0% | |
| TTGAGCTCTTTCATTGGTGA+CGG | - | tig0024176:22623-22642 | Msa1415150:three_prime_UTR | 40.0% | |
| ATGCCCAAAATTGTGAAGTG+TGG | + | tig0024176:22900-22919 | None:intergenic | 40.0% | |
| GGATCAATGTCATACAATGG+TGG | - | tig0024176:23126-23145 | Msa1415150:intron | 40.0% | |
| GGTGCTTACATTGCAATTGA+AGG | + | tig0024176:23220-23239 | None:intergenic | 40.0% | |
| AACATCAAGTACTTCCTTCC+TGG | - | tig0024176:23243-23262 | Msa1415150:intron | 40.0% | |
| ! | ATGAGCGTTTTCTTATTGCC+AGG | + | tig0024176:23264-23283 | None:intergenic | 40.0% |
| AGATAAGGATTTGCAACGGA+TGG | - | tig0024176:23296-23315 | Msa1415150:intron | 40.0% | |
| GTGAATAACTACCTACTAGC+AGG | + | tig0024176:23402-23421 | None:intergenic | 40.0% | |
| ATGAATCCCTGTTTGAGTCT+TGG | - | tig0024176:23652-23671 | Msa1415150:intron | 40.0% | |
| GAATCACATCACAGTGAATC+AGG | + | tig0024176:23693-23712 | None:intergenic | 40.0% | |
| CGGATGACAACTGTAAAACA+TGG | + | tig0024176:23768-23787 | None:intergenic | 40.0% | |
| TTGGTCACAACCATGATATC+CGG | + | tig0024176:23788-23807 | None:intergenic | 40.0% | |
| ! | TATGCCATGGCCATTCATTT+TGG | + | tig0024176:23807-23826 | None:intergenic | 40.0% |
| GTGGATGTGACCAAAATGAA+TGG | - | tig0024176:24245-24264 | Msa1415150:intron | 40.0% | |
| GATATGTCAAGTGCTTATGC+CGG | - | tig0024176:24443-24462 | Msa1415150:intron | 40.0% | |
| AATGCATTGCTCAGCATCAA+TGG | + | tig0024176:24632-24651 | None:intergenic | 40.0% | |
| AGAACAAAGAGATTGTGCAG+GGG | + | tig0024176:24686-24705 | None:intergenic | 40.0% | |
| CAGAACAAAGAGATTGTGCA+GGG | + | tig0024176:24687-24706 | None:intergenic | 40.0% | |
| CTGCACAATCTCTTTGTTCT+GGG | - | tig0024176:24686-24705 | Msa1415150:CDS | 40.0% | |
| TGCACAATCTCTTTGTTCTG+GGG | - | tig0024176:24687-24706 | Msa1415150:CDS | 40.0% | |
| TCTTTGACGCTTGTCATCAT+TGG | + | tig0024176:24713-24732 | None:intergenic | 40.0% | |
| !!! | TAGTTTTAGCGAATTCCGAG+AGG | - | tig0024176:24783-24802 | Msa1415150:CDS | 40.0% |
| GTAAGCAAAACCATGAGCAA+TGG | + | tig0024176:24824-24843 | None:intergenic | 40.0% | |
| AAATGATAGTCATCGGGTCA+CGG | - | tig0024176:24855-24874 | Msa1415150:CDS | 40.0% | |
| CTTTGACGCATATATTCTCC+AGG | + | tig0024176:24905-24924 | None:intergenic | 40.0% | |
| CTTGATGCAAATCAACTGAG+TGG | + | tig0024176:24935-24954 | None:intergenic | 40.0% | |
| ACCAGAGATCATACTTGTGA+AGG | - | tig0024176:24961-24980 | Msa1415150:CDS | 40.0% | |
| TCCTTCACAAGTATGATCTC+TGG | + | tig0024176:24965-24984 | None:intergenic | 40.0% | |
| TGAAAGCTTCACCCAATTAC+AGG | - | tig0024176:25049-25068 | Msa1415150:CDS | 40.0% | |
| GATATCCTTTGGCCTGTAAT+TGG | + | tig0024176:25064-25083 | None:intergenic | 40.0% | |
| ACTCCAAGGCTCTTATAAAG+AGG | - | tig0024176:25164-25183 | Msa1415150:CDS | 40.0% | |
| ATGCCTCTTTATAAGAGCCT+TGG | + | tig0024176:25170-25189 | None:intergenic | 40.0% | |
| TGCAACATTCACGACAAAAG+AGG | - | tig0024176:25245-25264 | Msa1415150:CDS | 40.0% | |
| ! | ATGCCTCAATAACTGGTTTC+CGG | - | tig0024176:25301-25320 | Msa1415150:CDS | 40.0% |
| TACTGTCAAGGAAAAGGAGA+GGG | + | tig0024176:25338-25357 | None:intergenic | 40.0% | |
| ATACTGTCAAGGAAAAGGAG+AGG | + | tig0024176:25339-25358 | None:intergenic | 40.0% | |
| ACTTCTGTCGATGGAAATGA+TGG | - | tig0024176:25399-25418 | Msa1415150:CDS | 40.0% | |
| ATGCCAGTTGTCTTCAGTTT+CGG | + | tig0024176:25457-25476 | None:intergenic | 40.0% | |
| AAACTGAAGACAACTGGCAT+TGG | - | tig0024176:25457-25476 | Msa1415150:CDS | 40.0% | |
| ACGTTCAAAAATCTCCGGTT+TGG | + | tig0024176:25709-25728 | None:intergenic | 40.0% | |
| TTTCTCCTGAAGCATACAAC+TGG | - | tig0024176:25751-25770 | Msa1415150:CDS | 40.0% | |
| TTCTCCTGAAGCATACAACT+GGG | - | tig0024176:25752-25771 | Msa1415150:CDS | 40.0% | |
| TGGTCCAATGCATTCTTCAA+TGG | - | tig0024176:25798-25817 | Msa1415150:CDS | 40.0% | |
| TGCTCCATTGAAGAATGCAT+TGG | + | tig0024176:25805-25824 | None:intergenic | 40.0% | |
| ATGCATTCTTCAATGGAGCA+AGG | - | tig0024176:25805-25824 | Msa1415150:CDS | 40.0% | |
| AAAATTGACACCATCCAAGG+AGG | - | tig0024176:25980-25999 | Msa1415150:CDS | 40.0% | |
| TGGATAATTTCCTCCTTGGA+TGG | + | tig0024176:25993-26012 | None:intergenic | 40.0% | |
| TTGTCCACAGACTTCAAATG+TGG | + | tig0024176:26066-26085 | None:intergenic | 40.0% | |
| TAATTGGGATTGTAGCTGCA+AGG | - | tig0024176:26109-26128 | Msa1415150:CDS | 40.0% | |
| AATTGGGATTGTAGCTGCAA+GGG | - | tig0024176:26110-26129 | Msa1415150:CDS | 40.0% | |
| ! | CTGTCTTTGAATGTGTTGGT+AGG | - | tig0024176:26171-26190 | Msa1415150:CDS | 40.0% |
| !! | TGGACTGGTTTGTCAATATC+TGG | + | tig0024176:26275-26294 | None:intergenic | 40.0% |
| AGATATTGACAAACCAGTCC+AGG | - | tig0024176:26274-26293 | Msa1415150:CDS | 40.0% | |
| CTTCAATGCGGTAAATGCAA+GGG | - | tig0024176:26404-26423 | Msa1415150:CDS | 40.0% | |
| GAAATGTTAACAAGTGCCCT+TGG | - | tig0024176:26635-26654 | Msa1415150:intron | 40.0% | |
| AATGTTAACAAGTGCCCTTG+GGG | - | tig0024176:26637-26656 | Msa1415150:intron | 40.0% | |
| AATCCTTAACTAGTGCCCTA+AGG | - | tig0024176:26775-26794 | Msa1415150:intron | 40.0% | |
| ATCCTTAACTAGTGCCCTAA+GGG | - | tig0024176:26776-26795 | Msa1415150:intron | 40.0% | |
| CTTGTTAACCAATGCCCTTA+GGG | + | tig0024176:26793-26812 | None:intergenic | 40.0% | |
| TCTTGTTAACCAATGCCCTT+AGG | + | tig0024176:26794-26813 | None:intergenic | 40.0% | |
| TCCCTTCCTTGTTCAATTCT+TGG | - | tig0024176:26949-26968 | Msa1415150:intron | 40.0% | |
| GTCCAAGAATTGAACAAGGA+AGG | + | tig0024176:26954-26973 | None:intergenic | 40.0% | |
| ! | AAAGTTGATTTCCGGAATGG+AGG | - | tig0024176:27247-27266 | Msa1415150:intron | 40.0% |
| GCACTAACACTTCAGATTGA+AGG | + | tig0024176:27804-27823 | None:intergenic | 40.0% | |
| CTCACTAGAGTTCAAATGGA+TGG | + | tig0024176:27847-27866 | None:intergenic | 40.0% | |
| CATCCATTTGAACTCTAGTG+AGG | - | tig0024176:27845-27864 | Msa1415150:CDS | 40.0% | |
| TTGAACTCTAGTGAGGATAC+TGG | - | tig0024176:27852-27871 | Msa1415150:CDS | 40.0% | |
| AGACAGTAGCTACAAACTAC+TGG | + | tig0024176:27992-28011 | None:intergenic | 40.0% | |
| ! | ACTTTGTCATTGTTGCTTGC+TGG | + | tig0024176:28086-28105 | None:intergenic | 40.0% |
| ! | TGAAACATTTTGCCTGACAC+AGG | - | tig0024176:28115-28134 | Msa1415150:intron | 40.0% |
| ! | GAAACATTTTGCCTGACACA+GGG | - | tig0024176:28116-28135 | Msa1415150:intron | 40.0% |
| !!! | GAAACGTTTTAGGGGTTGTA+TGG | - | tig0024176:28170-28189 | Msa1415150:intron | 40.0% |
| ! | AAGTAGGAAGCACGTGAATT+TGG | + | tig0024176:28216-28235 | None:intergenic | 40.0% |
| ! | TATTGATTGGTGGATCACTG+CGG | - | tig0024176:28394-28413 | Msa1415150:intron | 40.0% |
| ! | AGTTAGTTTCTCCTAGTTGG+AGG | - | tig0024176:28460-28479 | Msa1415150:intron | 40.0% |
| AGACAGGAAATACGTTGTCG+TGG | - | tig0024176:22566-22585 | Msa1415150:three_prime_UTR | 45.0% | |
| TATCCTCCATTCTGCCCTTT+AGG | - | tig0024176:22650-22669 | Msa1415150:three_prime_UTR | 45.0% | |
| AAACCTAAAGGGCAGAATGG+AGG | + | tig0024176:22656-22675 | None:intergenic | 45.0% | |
| GAGAAACCTAAAGGGCAGAA+TGG | + | tig0024176:22659-22678 | None:intergenic | 45.0% | |
| ! | GCGTTTTCTTATTGCCAGGA+AGG | + | tig0024176:23260-23279 | None:intergenic | 45.0% |
| !! | CAACGGATGGTTAGTTTCCT+TGG | - | tig0024176:23309-23328 | Msa1415150:intron | 45.0% |
| TAAATGAGGAAGTGGTGGCT+CGG | - | tig0024176:23361-23380 | Msa1415150:intron | 45.0% | |
| CAGTTGTCATCCGGATATCA+TGG | - | tig0024176:23775-23794 | Msa1415150:intron | 45.0% | |
| GTGACCAAAATGAATGGCCA+TGG | - | tig0024176:23800-23819 | Msa1415150:intron | 45.0% | |
| GACATCGCAATTACGTAGGT+CGG | + | tig0024176:24225-24244 | None:intergenic | 45.0% | |
| GAATCTAAATTGGGCCCAGT+TGG | + | tig0024176:24492-24511 | None:intergenic | 45.0% | |
| CCAGAACAAAGAGATTGTGC+AGG | + | tig0024176:24688-24707 | None:intergenic | 45.0% | |
| CCTGCACAATCTCTTTGTTC+TGG | - | tig0024176:24685-24704 | Msa1415150:CDS | 45.0% | |
| TGATGACAAGCGTCAAAGAG+CGG | - | tig0024176:24714-24733 | Msa1415150:CDS | 45.0% | |
| CAGTGGGAAAATACCATCAC+TGG | - | tig0024176:24742-24761 | Msa1415150:CDS | 45.0% | |
| AAGGATCTGCTGTCAAAGCT+GGG | - | tig0024176:24980-24999 | Msa1415150:CDS | 45.0% | |
| TTCACCCAATTACAGGCCAA+AGG | - | tig0024176:25056-25075 | Msa1415150:CDS | 45.0% | |
| ATGTCGTCTGCGATATCCTT+TGG | + | tig0024176:25075-25094 | None:intergenic | 45.0% | |
| ACGACATAAAGCGCGAGTAT+GGG | - | tig0024176:25088-25107 | Msa1415150:CDS | 45.0% | |
| ATTGCTAGAGAGCAACTCCA+AGG | - | tig0024176:25150-25169 | Msa1415150:CDS | 45.0% | |
| GTGAATGTTGCAAAACTCCC+AGG | + | tig0024176:25237-25256 | None:intergenic | 45.0% | |
| TTGCCGGAAACCAGTTATTG+AGG | + | tig0024176:25307-25326 | None:intergenic | 45.0% | |
| TCTACAACAGCAAAGGCTAC+AGG | + | tig0024176:25432-25451 | None:intergenic | 45.0% | |
| TTCGGCATCTACAACAGCAA+AGG | + | tig0024176:25439-25458 | None:intergenic | 45.0% | |
| ATGCCGAAACTGAAGACAAC+TGG | - | tig0024176:25451-25470 | Msa1415150:CDS | 45.0% | |
| !! | CAACTGGCATTGGTTTCTTC+AGG | - | tig0024176:25467-25486 | Msa1415150:CDS | 45.0% |
| CCTTGTTCAGTTTGTCAGCA+AGG | + | tig0024176:25614-25633 | None:intergenic | 45.0% | |
| CCTTGCTGACAAACTGAACA+AGG | - | tig0024176:25611-25630 | Msa1415150:CDS | 45.0% | |
| ATGACCCAGTTGTATGCTTC+AGG | + | tig0024176:25759-25778 | None:intergenic | 45.0% | |
| AACAATTAGCACACGACGAG+AGG | - | tig0024176:25938-25957 | Msa1415150:CDS | 45.0% | |
| GACGAGAGGAGTCTAATCAA+TGG | - | tig0024176:25952-25971 | Msa1415150:CDS | 45.0% | |
| ! | GAGCGTCTGATGTTTCCTTT+TGG | + | tig0024176:26013-26032 | None:intergenic | 45.0% |
| !! | CTACAGGTGTTGCTTTCACA+AGG | - | tig0024176:26038-26057 | Msa1415150:CDS | 45.0% |
| ! | GGTACCACATTTGAAGTCTG+TGG | - | tig0024176:26059-26078 | Msa1415150:CDS | 45.0% |
| TGCAAGGGATGGAAACTTAC+TGG | - | tig0024176:26125-26144 | Msa1415150:CDS | 45.0% | |
| ATATCTGGCAGAGCGTGAAT+TGG | + | tig0024176:26260-26279 | None:intergenic | 45.0% | |
| ! | CAAACCAGTCCAGGTTGAAT+CGG | - | tig0024176:26283-26302 | Msa1415150:CDS | 45.0% |
| GCTTCAATGCGGTAAATGCA+AGG | - | tig0024176:26403-26422 | Msa1415150:CDS | 45.0% | |
| CATCTTAACAAGTGCCCCAA+GGG | + | tig0024176:26654-26673 | None:intergenic | 45.0% | |
| ACATCTTAACAAGTGCCCCA+AGG | + | tig0024176:26655-26674 | None:intergenic | 45.0% | |
| TATATATGCGCACTAGGTCG+AGG | - | tig0024176:27615-27634 | Msa1415150:intron | 45.0% | |
| GTCTTATACGAAGACATGGC+AGG | + | tig0024176:27923-27942 | None:intergenic | 45.0% | |
| GCATCTACAGACTACATGGA+TGG | + | tig0024176:28026-28045 | None:intergenic | 45.0% | |
| CATTGAAGATTCCCTGTGTC+AGG | + | tig0024176:28130-28149 | None:intergenic | 45.0% | |
| !! | ATATATATATATATATATGA+GGG | + | tig0024176:26493-26512 | None:intergenic | 5.0% |
| !! | TATATATATATATATATATG+AGG | + | tig0024176:27603-27622 | None:intergenic | 5.0% |
| !! | TATATATATATATATATATG+AGG | + | tig0024176:27603-27622 | None:intergenic | 5.0% |
| TACGTTGTCGTGGTCATCGT+AGG | - | tig0024176:22576-22595 | Msa1415150:three_prime_UTR | 50.0% | |
| ACGTTGTCGTGGTCATCGTA+GGG | - | tig0024176:22577-22596 | Msa1415150:three_prime_UTR | 50.0% | |
| CTTTGTAGCTGTAGCAGCCA+TGG | + | tig0024176:23055-23074 | None:intergenic | 50.0% | |
| CAACAGTGCTAGCATCTCCA+AGG | + | tig0024176:23329-23348 | None:intergenic | 50.0% | |
| CATCCAACATGCCTGCTAGT+AGG | - | tig0024176:23388-23407 | Msa1415150:intron | 50.0% | |
| CTACCTACTAGCAGGCATGT+TGG | + | tig0024176:23394-23413 | None:intergenic | 50.0% | |
| CCACGACATCGCAATTACGT+AGG | + | tig0024176:24229-24248 | None:intergenic | 50.0% | |
| CCTACGTAATTGCGATGTCG+TGG | - | tig0024176:24226-24245 | Msa1415150:intron | 50.0% | |
| CCTTTGGTCTACACCAGTGA+TGG | + | tig0024176:24758-24777 | None:intergenic | 50.0% | |
| CCATCACTGGTGTAGACCAA+AGG | - | tig0024176:24755-24774 | Msa1415150:CDS | 50.0% | |
| GTAAATCTCAAGGCTGTCCC+TGG | - | tig0024176:24884-24903 | Msa1415150:CDS | 50.0% | |
| GAAGGATCTGCTGTCAAAGC+TGG | - | tig0024176:24979-24998 | Msa1415150:CDS | 50.0% | |
| GTATCGAGCGACTAGAGGTT+GGG | - | tig0024176:25002-25021 | Msa1415150:CDS | 50.0% | |
| GACGACATAAAGCGCGAGTA+TGG | - | tig0024176:25087-25106 | Msa1415150:CDS | 50.0% | |
| TTGGCTGCAACTTCTGTCGA+TGG | - | tig0024176:25390-25409 | Msa1415150:CDS | 50.0% | |
| GGTGACGTAAACAATAGCCG+TGG | + | tig0024176:25593-25612 | None:intergenic | 50.0% | |
| TCATGAGGCCAGACGTTTCA+TGG | - | tig0024176:25653-25672 | Msa1415150:CDS | 50.0% | |
| ! | TGCTGCTTACGCATCCAAAC+CGG | - | tig0024176:25692-25711 | Msa1415150:CDS | 50.0% |
| TACAAAGTGAGCCAGAGCAC+TGG | - | tig0024176:25778-25797 | Msa1415150:CDS | 50.0% | |
| AATGCATTGGACCAGTGCTC+TGG | + | tig0024176:25792-25811 | None:intergenic | 50.0% | |
| CAATAGCATGGCAGCAAGGA+AGG | + | tig0024176:26151-26170 | None:intergenic | 50.0% | |
| ACAGCAATAGCATGGCAGCA+AGG | + | tig0024176:26155-26174 | None:intergenic | 50.0% | |
| ! | ATAGCCGATTCAACCTGGAC+TGG | + | tig0024176:26290-26309 | None:intergenic | 50.0% |
| ! | AGTCCAGGTTGAATCGGCTA+TGG | - | tig0024176:26289-26308 | Msa1415150:CDS | 50.0% |
| ! | CTTCCATAGCCGATTCAACC+TGG | + | tig0024176:26295-26314 | None:intergenic | 50.0% |
| !! | TTTGATTTTGGCCGACCAGG+AGG | + | tig0024176:26350-26369 | None:intergenic | 50.0% |
| !! | TGCTTTGATTTTGGCCGACC+AGG | + | tig0024176:26353-26372 | None:intergenic | 50.0% |
| TGGTCGGCCAAAATCAAAGC+AGG | - | tig0024176:26352-26371 | Msa1415150:CDS | 50.0% | |
| TGCGGTAAATGCAAGGGACT+TGG | - | tig0024176:26410-26429 | Msa1415150:CDS | 50.0% | |
| GTTTGCACGTCTTCCGATTG+TGG | + | tig0024176:26436-26455 | None:intergenic | 50.0% | |
| ! | TGCCCTTAGGGCACTAGTTA+AGG | + | tig0024176:26781-26800 | None:intergenic | 50.0% |
| ! | AACTAGTGCCCTAAGGGCAT+TGG | - | tig0024176:26782-26801 | Msa1415150:intron | 50.0% |
| ATGGCAGGTACAACGGCTAA+TGG | + | tig0024176:27908-27927 | None:intergenic | 50.0% | |
| CGAAGACATGGCAGGTACAA+CGG | + | tig0024176:27915-27934 | None:intergenic | 50.0% | |
| TACATCTGGTGCCTCCAACT+AGG | + | tig0024176:28474-28493 | None:intergenic | 50.0% | |
| TCAAAGAGCGGCACAGCAGT+GGG | - | tig0024176:24726-24745 | Msa1415150:CDS | 55.0% | |
| ! | GGTATCGAGCGACTAGAGGT+TGG | - | tig0024176:25001-25020 | Msa1415150:CDS | 55.0% |
| AAGGAAAAGGAGAGGGCGAC+AGG | + | tig0024176:25331-25350 | None:intergenic | 55.0% | |
| ATCAGACGCTCGCTCACTAC+AGG | - | tig0024176:26022-26041 | Msa1415150:CDS | 55.0% | |
| GGGATTGTAGCTGCAAGGGA+TGG | - | tig0024176:26114-26133 | Msa1415150:CDS | 55.0% | |
| !! | AGGACGCTTAGTTGGTGGAG+GGG | + | tig0024176:26330-26349 | None:intergenic | 55.0% |
| !! | GAGGACGCTTAGTTGGTGGA+GGG | + | tig0024176:26331-26350 | None:intergenic | 55.0% |
| CAACTAAGCGTCCTCCTGGT+CGG | - | tig0024176:26336-26355 | Msa1415150:CDS | 55.0% | |
| GCAAGGGACTTGGCCACAAT+CGG | - | tig0024176:26420-26439 | Msa1415150:CDS | 55.0% | |
| CCTCAGACTCTCCTCCATTC+CGG | + | tig0024176:27261-27280 | None:intergenic | 55.0% | |
| TAACTACGCACCAGCCCAGT+CGG | - | tig0024176:27743-27762 | Msa1415150:CDS | 55.0% | |
| ! | ATCACTGTCAGCCACCGACT+GGG | + | tig0024176:27760-27779 | None:intergenic | 55.0% |
| TATCACTGTCAGCCACCGAC+TGG | + | tig0024176:27761-27780 | None:intergenic | 55.0% | |
| ! | GAAGGCGTGTCTAGTGTACG+AGG | + | tig0024176:27786-27805 | None:intergenic | 55.0% |
| GTCAAAGAGCGGCACAGCAG+TGG | - | tig0024176:24725-24744 | Msa1415150:CDS | 60.0% | |
| !! | GCTGGGTATCGAGCGACTAG+AGG | - | tig0024176:24997-25016 | Msa1415150:CDS | 60.0% |
| TCGAGCGACTAGAGGTTGGG+TGG | - | tig0024176:25005-25024 | Msa1415150:CDS | 60.0% | |
| CGAGCGACTAGAGGTTGGGT+GGG | - | tig0024176:25006-25025 | Msa1415150:CDS | 60.0% | |
| !! | GGAGGACGCTTAGTTGGTGG+AGG | + | tig0024176:26332-26351 | None:intergenic | 60.0% |
| CCAGGAGGACGCTTAGTTGG+TGG | + | tig0024176:26335-26354 | None:intergenic | 60.0% | |
| CCACCAACTAAGCGTCCTCC+TGG | - | tig0024176:26332-26351 | Msa1415150:CDS | 60.0% | |
| CGACCAGGAGGACGCTTAGT+TGG | + | tig0024176:26338-26357 | None:intergenic | 60.0% | |
| CCGGAATGGAGGAGAGTCTG+AGG | - | tig0024176:27258-27277 | Msa1415150:intron | 60.0% | |
| GGAGAGGGCGACAGGCTTGC+CGG | + | tig0024176:25323-25342 | None:intergenic | 70.0% | |
| CTACGCACCAGCCCAGTCGG+TGG | - | tig0024176:27746-27765 | Msa1415150:CDS | 70.0% | |
| ! | CTGTCAGCCACCGACTGGGC+TGG | + | tig0024176:27756-27775 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0024176 | gene | 22559 | 28580 | 22559 | ID=Msa1415150;Name=Msa1415150 |
| tig0024176 | mRNA | 22559 | 28580 | 22559 | ID=Msa1415150-mRNA-1;Parent=Msa1415150;Name=Msa1415150-mRNA-1;_AED=0.01;_eAED=0.01;_QI=116|1|1|1|0.33|0|4|456|750 |
| tig0024176 | exon | 22559 | 23002 | 22559 | ID=Msa1415150-mRNA-1:exon:22214;Parent=Msa1415150-mRNA-1 |
| tig0024176 | exon | 24664 | 26572 | 24664 | ID=Msa1415150-mRNA-1:exon:22213;Parent=Msa1415150-mRNA-1 |
| tig0024176 | exon | 27730 | 28088 | 27730 | ID=Msa1415150-mRNA-1:exon:22212;Parent=Msa1415150-mRNA-1 |
| tig0024176 | exon | 28468 | 28580 | 28468 | ID=Msa1415150-mRNA-1:exon:22211;Parent=Msa1415150-mRNA-1 |
| tig0024176 | five_prime_UTR | 28468 | 28580 | 28468 | ID=Msa1415150-mRNA-1:five_prime_utr;Parent=Msa1415150-mRNA-1 |
| tig0024176 | five_prime_UTR | 28086 | 28088 | 28086 | ID=Msa1415150-mRNA-1:five_prime_utr;Parent=Msa1415150-mRNA-1 |
| tig0024176 | CDS | 27730 | 28085 | 27730 | ID=Msa1415150-mRNA-1:cds;Parent=Msa1415150-mRNA-1 |
| tig0024176 | CDS | 24676 | 26572 | 24676 | ID=Msa1415150-mRNA-1:cds;Parent=Msa1415150-mRNA-1 |
| tig0024176 | three_prime_UTR | 24664 | 24675 | 24664 | ID=Msa1415150-mRNA-1:three_prime_utr;Parent=Msa1415150-mRNA-1 |
| tig0024176 | three_prime_UTR | 22559 | 23002 | 22559 | ID=Msa1415150-mRNA-1:three_prime_utr;Parent=Msa1415150-mRNA-1 |
| Gene Sequence |
| Protein sequence |
