Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1266810 | XP_024637989.1 | 99.067 | 750 | 7 | 0 | 1 | 750 | 1 | 750 | 0.0 | 1559 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1266810 | A0A396IHZ2 | 99.067 | 750 | 7 | 0 | 1 | 750 | 1 | 750 | 0.0 | 1559 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000880 | Msa1266810 | 0.805986 | 1.024316e-49 | -8.615850e-47 |
| Msa0012940 | Msa1266810 | 0.801207 | 1.003838e-48 | -8.615850e-47 |
| Msa0031820 | Msa1266810 | 0.802166 | 6.382948e-49 | -8.615850e-47 |
| Msa0039250 | Msa1266810 | 0.804410 | 2.189236e-49 | -8.615850e-47 |
| Msa0056450 | Msa1266810 | 0.805035 | 1.621338e-49 | -8.615850e-47 |
| Msa0089980 | Msa1266810 | 0.824969 | 6.049268e-54 | -8.615850e-47 |
| Msa0090010 | Msa1266810 | 0.826681 | 2.373792e-54 | -8.615850e-47 |
| Msa0093850 | Msa1266810 | 0.819179 | 1.330761e-52 | -8.615850e-47 |
| Msa0098470 | Msa1266810 | 0.814937 | 1.194281e-51 | -8.615850e-47 |
| Msa0100160 | Msa1266810 | 0.804634 | 1.965834e-49 | -8.615850e-47 |
| Msa0106620 | Msa1266810 | 0.805932 | 1.051532e-49 | -8.615850e-47 |
| Msa0607320 | Msa1266810 | 0.814050 | 1.876709e-51 | -8.615850e-47 |
| Msa0647430 | Msa1266810 | 0.800710 | 1.268552e-48 | -8.615850e-47 |
| Msa0652690 | Msa1266810 | 0.809445 | 1.885237e-50 | -8.615850e-47 |
| Msa0133720 | Msa1266810 | 0.815869 | 7.411816e-52 | -8.615850e-47 |
| Msa0133820 | Msa1266810 | 0.810289 | 1.241002e-50 | -8.615850e-47 |
| Msa0138360 | Msa1266810 | 0.822124 | 2.801023e-53 | -8.615850e-47 |
| Msa0144360 | Msa1266810 | 0.844349 | 7.989390e-59 | -8.615850e-47 |
| Msa0147980 | Msa1266810 | 0.817282 | 3.575741e-52 | -8.615850e-47 |
| Msa0225480 | Msa1266810 | 0.800967 | 1.124215e-48 | -8.615850e-47 |
| Msa0237210 | Msa1266810 | 0.835274 | 1.845570e-56 | -8.615850e-47 |
| Msa1252850 | Msa1266810 | -0.801545 | 8.561214e-49 | -8.615850e-47 |
| Msa1258340 | Msa1266810 | 0.810139 | 1.336866e-50 | -8.615850e-47 |
| Msa1266810 | Msa1297970 | 0.814511 | 1.484229e-51 | -8.615850e-47 |
| Msa1266810 | Msa1320670 | 0.817786 | 2.752355e-52 | -8.615850e-47 |
| Msa1266810 | Msa1328640 | 0.821923 | 3.118959e-53 | -8.615850e-47 |
| Msa1266810 | Msa1332760 | 0.802778 | 4.772750e-49 | -8.615850e-47 |
| Msa1266810 | Msa1348090 | 0.818845 | 1.584890e-52 | -8.615850e-47 |
| Msa1266810 | Msa1359560 | 0.802890 | 4.526096e-49 | -8.615850e-47 |
| Msa1266810 | Msa1369150 | 0.828799 | 7.351965e-55 | -8.615850e-47 |
| Msa1266810 | Msa1371520 | 0.829357 | 5.384804e-55 | -8.615850e-47 |
| Msa1266810 | Msa1373820 | 0.825014 | 5.906027e-54 | -8.615850e-47 |
| Msa1266810 | Msa1393820 | 0.844929 | 5.573830e-59 | -8.615850e-47 |
| Msa1266810 | Msa1409330 | 0.923626 | 2.073313e-89 | -8.615850e-47 |
| Msa1266810 | Msa1412000 | 0.802788 | 4.751085e-49 | -8.615850e-47 |
| Msa1266810 | Msa1415150 | 0.915960 | 3.158951e-85 | -8.615850e-47 |
| Msa1266810 | Msa1418240 | 0.823735 | 1.180129e-53 | -8.615850e-47 |
| Msa1266810 | Msa1427110 | 0.826977 | 2.017155e-54 | -8.615850e-47 |
| Msa0378720 | Msa1266810 | 0.818836 | 1.591880e-52 | -8.615850e-47 |
| Msa0474730 | Msa1266810 | 0.816710 | 4.805253e-52 | -8.615850e-47 |
| Msa0479200 | Msa1266810 | 0.815830 | 7.562321e-52 | -8.615850e-47 |
| Msa0480780 | Msa1266810 | 0.806683 | 7.301072e-50 | -8.615850e-47 |
| Msa1027990 | Msa1266810 | 0.810497 | 1.119290e-50 | -8.615850e-47 |
| Msa1028280 | Msa1266810 | 0.807967 | 3.902505e-50 | -8.615850e-47 |
| Msa1034500 | Msa1266810 | 0.818826 | 1.600629e-52 | -8.615850e-47 |
| Msa1036280 | Msa1266810 | 0.815296 | 9.942517e-52 | -8.615850e-47 |
| Msa1050910 | Msa1266810 | 0.800527 | 1.382130e-48 | -8.615850e-47 |
| Msa1076560 | Msa1266810 | 0.833253 | 5.930620e-56 | -8.615850e-47 |
| Msa1085330 | Msa1266810 | 0.826112 | 3.244213e-54 | -8.615850e-47 |
| Msa0274980 | Msa1266810 | 0.807030 | 6.168378e-50 | -8.615850e-47 |
| Msa0315690 | Msa1266810 | 0.821182 | 4.624892e-53 | -8.615850e-47 |
| Msa0341690 | Msa1266810 | 0.830022 | 3.709764e-55 | -8.615850e-47 |
| Msa0342010 | Msa1266810 | 0.810486 | 1.125617e-50 | -8.615850e-47 |
| Msa1124950 | Msa1266810 | 0.806011 | 1.011896e-49 | -8.615850e-47 |
| Msa1127590 | Msa1266810 | 0.803978 | 2.692874e-49 | -8.615850e-47 |
| Msa1145810 | Msa1266810 | 0.803697 | 3.080033e-49 | -8.615850e-47 |
| Msa1206230 | Msa1266810 | 0.818725 | 1.686986e-52 | -8.615850e-47 |
| Msa1219000 | Msa1266810 | 0.804593 | 2.005124e-49 | -8.615850e-47 |
| Msa1219500 | Msa1266810 | 0.914326 | 2.184981e-84 | -8.615850e-47 |
| Msa0483100 | Msa1266810 | 0.807667 | 4.519938e-50 | -8.615850e-47 |
| Msa0485240 | Msa1266810 | 0.810934 | 9.003926e-51 | -8.615850e-47 |
| Msa0518030 | Msa1266810 | 0.823283 | 1.505501e-53 | -8.615850e-47 |
| Msa0519760 | Msa1266810 | 0.811787 | 5.879367e-51 | -8.615850e-47 |
| Msa0519840 | Msa1266810 | 0.812102 | 5.020402e-51 | -8.615850e-47 |
| Msa0527190 | Msa1266810 | 0.821228 | 4.514912e-53 | -8.615850e-47 |
| Msa0576680 | Msa1266810 | 0.802094 | 6.603702e-49 | -8.615850e-47 |
| Msa0581690 | Msa1266810 | 0.800209 | 1.604849e-48 | -8.615850e-47 |
| Msa0926470 | Msa1266810 | 0.805561 | 1.257742e-49 | -8.615850e-47 |
| Msa0945240 | Msa1266810 | 0.809790 | 1.589654e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1266810 | MtrunA17_Chr4g0069321 | 99.067 | 750 | 7 | 0 | 1 | 750 | 1 | 750 | 0.0 | 1559 |
| Msa1266810 | MtrunA17_Chr1g0193171 | 61.178 | 747 | 277 | 6 | 8 | 748 | 5 | 744 | 0.0 | 935 |
| Msa1266810 | MtrunA17_Chr4g0049281 | 39.442 | 573 | 329 | 7 | 186 | 748 | 8 | 572 | 2.95e-144 | 435 |
| Msa1266810 | MtrunA17_Chr1g0190521 | 39.168 | 577 | 328 | 7 | 186 | 747 | 196 | 764 | 9.12e-143 | 437 |
| Msa1266810 | MtrunA17_Chr1g0190511 | 38.821 | 577 | 330 | 7 | 186 | 747 | 91 | 659 | 2.33e-141 | 430 |
| Msa1266810 | MtrunA17_Chr7g0275141 | 35.579 | 579 | 351 | 6 | 186 | 749 | 22 | 593 | 2.11e-130 | 400 |
| Msa1266810 | MtrunA17_Chr2g0281381 | 29.561 | 592 | 362 | 13 | 196 | 749 | 375 | 949 | 2.81e-82 | 283 |
| Msa1266810 | MtrunA17_Chr6g0462901 | 28.995 | 607 | 377 | 15 | 178 | 749 | 405 | 992 | 8.41e-79 | 274 |
| Msa1266810 | MtrunA17_Chr6g0477881 | 26.846 | 596 | 380 | 13 | 190 | 748 | 324 | 900 | 2.80e-71 | 253 |
| Msa1266810 | MtrunA17_Chr6g0477921 | 26.846 | 596 | 380 | 13 | 190 | 748 | 324 | 900 | 3.20e-71 | 253 |
| Msa1266810 | MtrunA17_Chr8g0373261 | 27.692 | 585 | 377 | 14 | 188 | 747 | 323 | 886 | 8.23e-62 | 224 |
| Msa1266810 | MtrunA17_Chr3g0081981 | 26.335 | 562 | 359 | 14 | 225 | 748 | 3 | 547 | 1.98e-61 | 219 |
| Msa1266810 | MtrunA17_Chr6g0455001 | 28.469 | 418 | 253 | 11 | 363 | 748 | 1 | 404 | 1.26e-50 | 182 |
| Msa1266810 | MtrunA17_Chr1g0154181 | 25.556 | 630 | 413 | 18 | 155 | 747 | 46 | 656 | 3.75e-48 | 181 |
| Msa1266810 | MtrunA17_Chr8g0338961 | 32.231 | 242 | 148 | 4 | 188 | 421 | 276 | 509 | 7.89e-32 | 130 |
| Msa1266810 | MtrunA17_Chr4g0033901 | 28.431 | 306 | 187 | 8 | 135 | 425 | 9 | 297 | 9.13e-31 | 122 |
| Msa1266810 | MtrunA17_Chr7g0231781 | 30.000 | 230 | 150 | 3 | 294 | 518 | 3 | 226 | 8.04e-30 | 118 |
| Msa1266810 | MtrunA17_Chr2g0329971 | 32.057 | 209 | 120 | 6 | 271 | 459 | 5 | 211 | 2.24e-27 | 110 |
| Msa1266810 | MtrunA17_Chr2g0303051 | 34.711 | 121 | 79 | 0 | 356 | 476 | 24 | 144 | 4.77e-21 | 90.5 |
| Msa1266810 | MtrunA17_Chr5g0413371 | 33.333 | 156 | 101 | 2 | 190 | 344 | 390 | 543 | 1.29e-18 | 90.5 |
| Msa1266810 | MtrunA17_Chr1g0211111 | 29.592 | 196 | 121 | 4 | 566 | 748 | 1 | 192 | 6.85e-15 | 78.2 |
| Msa1266810 | MtrunA17_Chr2g0278781 | 28.676 | 136 | 82 | 3 | 624 | 748 | 44 | 175 | 5.54e-14 | 71.6 |
| Msa1266810 | MtrunA17_Chr5g0404701 | 23.563 | 174 | 128 | 3 | 504 | 672 | 4 | 177 | 9.82e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1266810 | AT3G05850.1 | 57.867 | 769 | 296 | 7 | 7 | 748 | 4 | 771 | 0.0 | 885 |
| Msa1266810 | AT1G06740.1 | 35.195 | 591 | 356 | 10 | 175 | 747 | 141 | 722 | 7.94e-123 | 384 |
| Msa1266810 | AT1G64260.2 | 22.598 | 739 | 520 | 18 | 4 | 715 | 5 | 718 | 2.71e-40 | 159 |
| Msa1266810 | AT1G64260.1 | 22.598 | 739 | 520 | 18 | 4 | 715 | 5 | 718 | 2.71e-40 | 159 |
| Msa1266810 | AT1G49920.2 | 23.218 | 547 | 354 | 14 | 190 | 690 | 186 | 712 | 3.97e-33 | 137 |
| Msa1266810 | AT1G49920.1 | 23.218 | 547 | 354 | 14 | 190 | 690 | 186 | 712 | 3.97e-33 | 137 |
| Msa1266810 | AT1G64255.1 | 24.691 | 486 | 335 | 12 | 224 | 690 | 232 | 705 | 8.25e-30 | 126 |
| Msa1266810 | AT5G15685.1 | 29.839 | 248 | 165 | 5 | 190 | 432 | 183 | 426 | 7.26e-29 | 121 |
| Msa1266810 | AT1G64253.1 | 23.145 | 337 | 235 | 8 | 392 | 715 | 2 | 327 | 1.74e-19 | 92.0 |
| Msa1266810 | AT1G64253.2 | 23.629 | 237 | 169 | 5 | 487 | 715 | 19 | 251 | 9.15e-11 | 64.3 |
Find 191 sgRNAs with CRISPR-Local
Find 386 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATCTTATGACATCAAATTT+TGG | 0.113475 | 8_2:-71841216 | Msa1266810:CDS |
| CCTGCACAATCTCTTTGTTC+TGG | 0.154930 | 8_2:-71842362 | Msa1266810:CDS |
| TCAATGGCTGCTACATTAAT+AGG | 0.174196 | 8_2:+71842434 | None:intergenic |
| GATTCAACCTGCTTTGATTT+TGG | 0.203125 | 8_2:+71840688 | None:intergenic |
| GATATCCTTTGGCCTGTAAT+TGG | 0.220676 | 8_2:+71841986 | None:intergenic |
| CAAACTGAACAAGGACTTAA+AGG | 0.227894 | 8_2:-71841427 | Msa1266810:CDS |
| CTGCACAATCTCTTTGTTCT+GGG | 0.229547 | 8_2:-71842361 | Msa1266810:CDS |
| TATCCTCCATTCTGCCCTTT+AGG | 0.244797 | 8_2:-71844400 | Msa1266810:intron |
| AAATTGTTGATATTGATAAT+TGG | 0.248753 | 8_2:-71840954 | Msa1266810:CDS |
| CGTAGTATTGAGAATATAAA+AGG | 0.273452 | 8_2:-71841321 | Msa1266810:CDS |
| ATTGAAGCTGACGTTTAATT+AGG | 0.286176 | 8_2:+71840659 | None:intergenic |
| TCTTTGACGCTTGTCATCAT+TGG | 0.287688 | 8_2:+71842337 | None:intergenic |
| AAGTAGGAAGCACGTGAATT+TGG | 0.292310 | 8_2:+71838917 | None:intergenic |
| CAACTGGCATTGGTTTCTTC+AGG | 0.296129 | 8_2:-71841580 | Msa1266810:CDS |
| CGCTAAAACTATTAAACCTT+TGG | 0.299997 | 8_2:+71842276 | None:intergenic |
| TCATTTCATGCCTCAATAAC+TGG | 0.305262 | 8_2:-71841753 | Msa1266810:CDS |
| TGAAAGCTTCACCCAATTAC+AGG | 0.306875 | 8_2:-71841998 | Msa1266810:CDS |
| AAAGTATCAAGGGGAATTAT+TGG | 0.307157 | 8_2:-71841676 | Msa1266810:CDS |
| TGACATTGATCCATCTATAT+TGG | 0.310445 | 8_2:+71843932 | None:intergenic |
| AATGAAGCAAGATGCAAATA+TGG | 0.313394 | 8_2:-71838984 | Msa1266810:three_prime_UTR |
| GACGACATAAAGCGCGAGTA+TGG | 0.321301 | 8_2:-71841960 | Msa1266810:CDS |
| AAATTTAAATAACTAGAAAA+TGG | 0.324116 | 8_2:+71838758 | None:intergenic |
| ATGCCTCAATAACTGGTTTC+CGG | 0.324519 | 8_2:-71841746 | Msa1266810:CDS |
| ACATCAATCATTTGAGTGAT+TGG | 0.329504 | 8_2:+71841153 | None:intergenic |
| ATGCCAGTTGTCTTCAGTTT+CGG | 0.342179 | 8_2:+71841593 | None:intergenic |
| GAGCGTCTGATGTTTCCTTT+TGG | 0.342716 | 8_2:+71841037 | None:intergenic |
| TACATTGCAATTGAAGGTTT+CGG | 0.348044 | 8_2:+71843836 | None:intergenic |
| ATGACCCAGTTGTATGCTTC+AGG | 0.348916 | 8_2:+71841291 | None:intergenic |
| AGTTATTTAAATTTATTGAT+TGG | 0.349918 | 8_2:-71838749 | Msa1266810:three_prime_UTR |
| CAACGGATGGTTAGTTTCCT+TGG | 0.350493 | 8_2:-71843738 | Msa1266810:CDS |
| TCATGAGGCCAGACGTTTCA+TGG | 0.355335 | 8_2:-71841394 | Msa1266810:CDS |
| AATTACTTCATCTGGCAAAC+TGG | 0.357816 | 8_2:-71838826 | Msa1266810:three_prime_UTR |
| CATTAATCTGGTCATGCAAT+TGG | 0.362200 | 8_2:+71838587 | None:intergenic |
| AGGCATGAAATGATACAAAA+AGG | 0.364107 | 8_2:+71841763 | None:intergenic |
| GGAGAGGGCGACAGGCTTGC+CGG | 0.366956 | 8_2:+71841727 | None:intergenic |
| TGCAAGGGATGGAAACTTAC+TGG | 0.367103 | 8_2:-71840922 | Msa1266810:CDS |
| AAGATAAAAGAGACTAATCC+TGG | 0.383049 | 8_2:-71841831 | Msa1266810:CDS |
| TGGACTGGTTTGTCAATATC+TGG | 0.384054 | 8_2:+71840775 | None:intergenic |
| AATTGTTGATATTGATAATT+GGG | 0.386007 | 8_2:-71840953 | Msa1266810:CDS |
| AACATCAAGTACTTCCTTCC+TGG | 0.387501 | 8_2:-71843804 | Msa1266810:CDS |
| AGAAGTTAGTTTCTCCTAGT+TGG | 0.388614 | 8_2:-71838673 | Msa1266810:three_prime_UTR |
| ATGTCGTCTGCGATATCCTT+TGG | 0.391266 | 8_2:+71841975 | None:intergenic |
| AGAGAACAAATTACTTCATC+TGG | 0.399393 | 8_2:-71838834 | Msa1266810:three_prime_UTR |
| GAGAAATTGAGCTCTTTCAT+TGG | 0.406468 | 8_2:-71844433 | Msa1266810:five_prime_UTR |
| ATCAGTTAGTTATTGTTATC+CGG | 0.408822 | 8_2:-71838858 | Msa1266810:three_prime_UTR |
| TTTATCTTCTCACAAAAGAA+TGG | 0.413555 | 8_2:+71841846 | None:intergenic |
| TTTCTCCTGAAGCATACAAC+TGG | 0.416731 | 8_2:-71841296 | Msa1266810:CDS |
| ATATCCTTTGGCCTGTAATT+GGG | 0.438933 | 8_2:+71841987 | None:intergenic |
| TGGATAATTTCCTCCTTGGA+TGG | 0.440016 | 8_2:+71841057 | None:intergenic |
| GAATTTGTAACCAATATAGA+TGG | 0.446033 | 8_2:-71843942 | Msa1266810:CDS |
| GTCAAAGAGCGGCACAGCAG+TGG | 0.447669 | 8_2:-71842322 | Msa1266810:CDS |
| CTTTGTAGCTGTAGCAGCCA+TGG | 0.451242 | 8_2:+71843995 | None:intergenic |
| TGCGGTAAATGCAAGGGACT+TGG | 0.451657 | 8_2:-71840637 | Msa1266810:CDS |
| GGTGCTTACATTGCAATTGA+AGG | 0.452249 | 8_2:+71843830 | None:intergenic |
| CAATGGCTGCTACATTAATA+GGG | 0.455291 | 8_2:+71842435 | None:intergenic |
| AATGCATTGGACCAGTGCTC+TGG | 0.455861 | 8_2:+71841258 | None:intergenic |
| AAAGAATACTGTCAAGGAAA+AGG | 0.457231 | 8_2:+71841706 | None:intergenic |
| GAAGGATCTGCTGTCAAAGC+TGG | 0.459403 | 8_2:-71842068 | Msa1266810:CDS |
| CATAAATACTCCATTGCTCA+TGG | 0.463415 | 8_2:-71842236 | Msa1266810:CDS |
| AAGCTAACTAATCTCTAAGT+AGG | 0.464644 | 8_2:+71838901 | None:intergenic |
| AAGAGAGAGAGAAACCTAAA+GGG | 0.464795 | 8_2:+71844386 | None:intergenic |
| AAGGAAGTACTTGATGTTCA+TGG | 0.465370 | 8_2:+71843809 | None:intergenic |
| ATGCCTCTTTATAAGAGCCT+TGG | 0.465522 | 8_2:+71841880 | None:intergenic |
| AATGCATTGCTCAGCATCAA+TGG | 0.471564 | 8_2:+71842418 | None:intergenic |
| CTGTCTTTGAATGTGTTGGT+AGG | 0.475394 | 8_2:-71840876 | Msa1266810:CDS |
| ATCATTAACCATGAAACGTC+TGG | 0.476096 | 8_2:+71841386 | None:intergenic |
| ATATCTGGCAGAGCGTGAAT+TGG | 0.476248 | 8_2:+71840790 | None:intergenic |
| GCAAGGGACTTGGCCACAAT+CGG | 0.477266 | 8_2:-71840627 | Msa1266810:CDS |
| TATTTAAATTTATTGATTGG+TGG | 0.479127 | 8_2:-71838746 | Msa1266810:three_prime_UTR |
| TGCAACATTCACGACAAAAG+AGG | 0.481312 | 8_2:-71841802 | Msa1266810:CDS |
| AAACTGAACAAGGACTTAAA+GGG | 0.481927 | 8_2:-71841426 | Msa1266810:CDS |
| ATAACAGAAACACATTAATC+TGG | 0.482266 | 8_2:+71838575 | None:intergenic |
| AAGGAAAAGGAGAGGGCGAC+AGG | 0.485747 | 8_2:+71841719 | None:intergenic |
| TGAAGTAATTTGTTCTCTAC+CGG | 0.486918 | 8_2:+71838839 | None:intergenic |
| GTAAATCTCAAGGCTGTCCC+TGG | 0.488941 | 8_2:-71842163 | Msa1266810:CDS |
| ATGCCGAAACTGAAGACAAC+TGG | 0.490063 | 8_2:-71841596 | Msa1266810:CDS |
| TCCTTCACAAGTATGATCTC+TGG | 0.490803 | 8_2:+71842085 | None:intergenic |
| CAAGGAGGAAATTATCCAAA+AGG | 0.490970 | 8_2:-71841052 | Msa1266810:CDS |
| AGTTAGTTTCTCCTAGTTGG+AGG | 0.492271 | 8_2:-71838670 | Msa1266810:three_prime_UTR |
| AATTCTCAACTGTGAAGTAT+CGG | 0.493598 | 8_2:+71840833 | None:intergenic |
| TTATGCAATTGACATTGATC+AGG | 0.494241 | 8_2:-71843892 | Msa1266810:CDS |
| CGACCAGGAGGACGCTTAGT+TGG | 0.496692 | 8_2:+71840712 | None:intergenic |
| TGGTCCAATGCATTCTTCAA+TGG | 0.497526 | 8_2:-71841249 | Msa1266810:CDS |
| ATTGCTGTCTTTGAATGTGT+TGG | 0.497680 | 8_2:-71840880 | Msa1266810:CDS |
| CTTTGACGCATATATTCTCC+AGG | 0.498153 | 8_2:+71842145 | None:intergenic |
| TGCTGCTTACGCATCCAAAC+CGG | 0.499342 | 8_2:-71841355 | Msa1266810:CDS |
| CATCCAACATGCCTGCTAGT+AGG | 0.501700 | 8_2:-71843659 | Msa1266810:intron |
| ATATTTGAAAACTGCTACCA+CGG | 0.502913 | 8_2:-71841474 | Msa1266810:CDS |
| CAAACCAGTCCAGGTTGAAT+CGG | 0.503060 | 8_2:-71840764 | Msa1266810:CDS |
| GTTTGCACGTCTTCCGATTG+TGG | 0.503969 | 8_2:+71840614 | None:intergenic |
| ATTCTCAACTGTGAAGTATC+GGG | 0.507704 | 8_2:+71840834 | None:intergenic |
| GGTATCGAGCGACTAGAGGT+TGG | 0.509333 | 8_2:-71842046 | Msa1266810:CDS |
| CTTCCATAGCCGATTCAACC+TGG | 0.511413 | 8_2:+71840755 | None:intergenic |
| ATCAGACGCTCGCTCACTAC+AGG | 0.514275 | 8_2:-71841025 | Msa1266810:CDS |
| CCAGAACAAAGAGATTGTGC+AGG | 0.515447 | 8_2:+71842362 | None:intergenic |
| TACGTTGTCGTGGTCATCGT+AGG | 0.516513 | 8_2:-71844474 | Msa1266810:five_prime_UTR |
| CATTACAGTGTCGAAAGATA+AGG | 0.518292 | 8_2:-71843766 | Msa1266810:CDS |
| TCAAAGAGCGGCACAGCAGT+GGG | 0.518340 | 8_2:-71842321 | Msa1266810:CDS |
| CCTTGTTCAGTTTGTCAGCA+AGG | 0.518369 | 8_2:+71841436 | None:intergenic |
| ATCGGGAACAATAATCATAT+AGG | 0.518434 | 8_2:+71840851 | None:intergenic |
| GTATCGAGCGACTAGAGGTT+GGG | 0.520425 | 8_2:-71842045 | Msa1266810:CDS |
| TGCTCCATTGAAGAATGCAT+TGG | 0.520736 | 8_2:+71841245 | None:intergenic |
| TGCACAATCTCTTTGTTCTG+GGG | 0.521328 | 8_2:-71842360 | Msa1266810:CDS |
| TTGAGCTCTTTCATTGGTGA+CGG | 0.521692 | 8_2:-71844427 | Msa1266810:five_prime_UTR |
| TCTACAACAGCAAAGGCTAC+AGG | 0.521980 | 8_2:+71841618 | None:intergenic |
| AAACTGAAGACAACTGGCAT+TGG | 0.522078 | 8_2:-71841590 | Msa1266810:CDS |
| AGTTAAATTATTCTCAAGCA+TGG | 0.524598 | 8_2:-71841932 | Msa1266810:CDS |
| CCAGGAGGACGCTTAGTTGG+TGG | 0.525231 | 8_2:+71840715 | None:intergenic |
| GAGAAACCTAAAGGGCAGAA+TGG | 0.530957 | 8_2:+71844394 | None:intergenic |
| ACGACATAAAGCGCGAGTAT+GGG | 0.531442 | 8_2:-71841959 | Msa1266810:CDS |
| TGTCTTTGAATGTGTTGGTA+GGG | 0.532718 | 8_2:-71840875 | Msa1266810:CDS |
| AACAATTAGCACACGACGAG+AGG | 0.534057 | 8_2:-71841109 | Msa1266810:CDS |
| GTGAATAACTACCTACTAGC+AGG | 0.540396 | 8_2:+71843648 | None:intergenic |
| TTGCCGGAAACCAGTTATTG+AGG | 0.542162 | 8_2:+71841743 | None:intergenic |
| TTGGCTGCAACTTCTGTCGA+TGG | 0.542172 | 8_2:-71841657 | Msa1266810:CDS |
| CCACCAACTAAGCGTCCTCC+TGG | 0.542401 | 8_2:-71840715 | Msa1266810:CDS |
| AGATAAGGATTTGCAACGGA+TGG | 0.544534 | 8_2:-71843751 | Msa1266810:CDS |
| CAGTGGGAAAATACCATCAC+TGG | 0.547435 | 8_2:-71842305 | Msa1266810:CDS |
| ACATTAATAGGGATAACAAC+AGG | 0.549105 | 8_2:+71842446 | None:intergenic |
| AGTCCAGGTTGAATCGGCTA+TGG | 0.549247 | 8_2:-71840758 | Msa1266810:CDS |
| ATAGCCGATTCAACCTGGAC+TGG | 0.549788 | 8_2:+71840760 | None:intergenic |
| GAGGACGCTTAGTTGGTGGA+GGG | 0.559572 | 8_2:+71840719 | None:intergenic |
| GCTTCAATGCGGTAAATGCA+AGG | 0.559948 | 8_2:-71840644 | Msa1266810:CDS |
| CCTTGCTGACAAACTGAACA+AGG | 0.563477 | 8_2:-71841436 | Msa1266810:CDS |
| AGATATTGACAAACCAGTCC+AGG | 0.565631 | 8_2:-71840773 | Msa1266810:CDS |
| ACTCCAAGGCTCTTATAAAG+AGG | 0.566265 | 8_2:-71841883 | Msa1266810:CDS |
| ACCAGAGATCATACTTGTGA+AGG | 0.566536 | 8_2:-71842086 | Msa1266810:CDS |
| GTGAATGTTGCAAAACTCCC+AGG | 0.568807 | 8_2:+71841813 | None:intergenic |
| TACATCTGGTGCCTCCAACT+AGG | 0.572112 | 8_2:+71838659 | None:intergenic |
| CAATAGCATGGCAGCAAGGA+AGG | 0.574571 | 8_2:+71840899 | None:intergenic |
| ACTTCTGTCGATGGAAATGA+TGG | 0.575330 | 8_2:-71841648 | Msa1266810:CDS |
| GGAGGACGCTTAGTTGGTGG+AGG | 0.576697 | 8_2:+71840718 | None:intergenic |
| TACAAAGTGAGCCAGAGCAC+TGG | 0.579145 | 8_2:-71841269 | Msa1266810:CDS |
| CTACAGGTGTTGCTTTCACA+AGG | 0.581162 | 8_2:-71841009 | Msa1266810:CDS |
| AACAAAATTGACACCATCCA+AGG | 0.581806 | 8_2:-71841070 | Msa1266810:CDS |
| TAATTGGGATTGTAGCTGCA+AGG | 0.582427 | 8_2:-71840938 | Msa1266810:CDS |
| AGTATTTATGCAATGCCTCT+CGG | 0.582480 | 8_2:+71842249 | None:intergenic |
| TGGTCGGCCAAAATCAAAGC+AGG | 0.582545 | 8_2:-71840695 | Msa1266810:CDS |
| TAAATGAGGAAGTGGTGGCT+CGG | 0.583268 | 8_2:-71843686 | Msa1266810:CDS |
| AGTTTAAAAGAATACTGTCA+AGG | 0.583589 | 8_2:+71841700 | None:intergenic |
| GTTTGTTATAAATGAGGAAG+TGG | 0.583832 | 8_2:-71843694 | Msa1266810:CDS |
| TTTAAACTCAAAGTATCAAG+GGG | 0.584199 | 8_2:-71841685 | Msa1266810:CDS |
| ACGTTGTCGTGGTCATCGTA+GGG | 0.588435 | 8_2:-71844473 | Msa1266810:five_prime_UTR |
| AGATAAAAGAGACTAATCCT+GGG | 0.595650 | 8_2:-71841830 | Msa1266810:CDS |
| CGAGCGACTAGAGGTTGGGT+GGG | 0.595820 | 8_2:-71842041 | Msa1266810:CDS |
| GACGAGAGGAGTCTAATCAA+TGG | 0.596180 | 8_2:-71841095 | Msa1266810:CDS |
| TGATGTGTTTGTTATAAATG+AGG | 0.598386 | 8_2:-71843700 | Msa1266810:CDS |
| GTAAGCAAAACCATGAGCAA+TGG | 0.599165 | 8_2:+71842226 | None:intergenic |
| ACGGTCAAATGTAAATCTCA+AGG | 0.600516 | 8_2:-71842173 | Msa1266810:CDS |
| CCTTTGGTCTACACCAGTGA+TGG | 0.601976 | 8_2:+71842292 | None:intergenic |
| AAATGATAGTCATCGGGTCA+CGG | 0.602533 | 8_2:-71842192 | Msa1266810:CDS |
| TCGAGCGACTAGAGGTTGGG+TGG | 0.606801 | 8_2:-71842042 | Msa1266810:CDS |
| CAGAACAAAGAGATTGTGCA+GGG | 0.608579 | 8_2:+71842363 | None:intergenic |
| AAGGATCTGCTGTCAAAGCT+GGG | 0.609887 | 8_2:-71842067 | Msa1266810:CDS |
| GGGATTGTAGCTGCAAGGGA+TGG | 0.612068 | 8_2:-71840933 | Msa1266810:CDS |
| CTACCTACTAGCAGGCATGT+TGG | 0.612141 | 8_2:+71843656 | None:intergenic |
| TACTGTCAAGGAAAAGGAGA+GGG | 0.612619 | 8_2:+71841712 | None:intergenic |
| CAACTAAGCGTCCTCCTGGT+CGG | 0.615992 | 8_2:-71840711 | Msa1266810:CDS |
| TTCGGCATCTACAACAGCAA+AGG | 0.618419 | 8_2:+71841611 | None:intergenic |
| ATAGCTATATGTCAATCAAG+AGG | 0.619889 | 8_2:-71843966 | Msa1266810:CDS |
| GGTACCACATTTGAAGTCTG+TGG | 0.619906 | 8_2:-71840988 | Msa1266810:CDS |
| TTCACCCAATTACAGGCCAA+AGG | 0.626468 | 8_2:-71841991 | Msa1266810:CDS |
| CTTCAATGCGGTAAATGCAA+GGG | 0.629621 | 8_2:-71840643 | Msa1266810:CDS |
| GATGGATCAATGTCATACAA+TGG | 0.629781 | 8_2:-71843924 | Msa1266810:CDS |
| AATTGGGATTGTAGCTGCAA+GGG | 0.630644 | 8_2:-71840937 | Msa1266810:CDS |
| CAACAGTGCTAGCATCTCCA+AGG | 0.632215 | 8_2:+71843721 | None:intergenic |
| ACAGCAATAGCATGGCAGCA+AGG | 0.633671 | 8_2:+71840895 | None:intergenic |
| CCATCACTGGTGTAGACCAA+AGG | 0.634322 | 8_2:-71842292 | Msa1266810:CDS |
| TTCTCCTGAAGCATACAACT+GGG | 0.635931 | 8_2:-71841295 | Msa1266810:CDS |
| TGTATTACGAGGTAACATGA+TGG | 0.636401 | 8_2:-71841133 | Msa1266810:CDS |
| AAAGGGACAATTATCTCATG+AGG | 0.640743 | 8_2:-71841409 | Msa1266810:CDS |
| AAACCTAAAGGGCAGAATGG+AGG | 0.643442 | 8_2:+71844397 | None:intergenic |
| ATTGCTAGAGAGCAACTCCA+AGG | 0.645401 | 8_2:-71841897 | Msa1266810:CDS |
| ATGCATTCTTCAATGGAGCA+AGG | 0.649814 | 8_2:-71841242 | Msa1266810:CDS |
| ATTCAAAGACAGCAATAGCA+TGG | 0.650011 | 8_2:+71840887 | None:intergenic |
| TGTTATAAATGAGGAAGTGG+TGG | 0.650228 | 8_2:-71843691 | Msa1266810:CDS |
| AGACAGGAAATACGTTGTCG+TGG | 0.657358 | 8_2:-71844484 | Msa1266810:five_prime_UTR |
| CTTGATGCAAATCAACTGAG+TGG | 0.664605 | 8_2:+71842115 | None:intergenic |
| AGGACGCTTAGTTGGTGGAG+GGG | 0.666771 | 8_2:+71840720 | None:intergenic |
| TTGTCCACAGACTTCAAATG+TGG | 0.667756 | 8_2:+71840984 | None:intergenic |
| TGATGACAAGCGTCAAAGAG+CGG | 0.668148 | 8_2:-71842333 | Msa1266810:CDS |
| CGAAAGATAAGGATTTGCAA+CGG | 0.672160 | 8_2:-71843755 | Msa1266810:CDS |
| CAAATGATTGATGTATTACG+AGG | 0.686709 | 8_2:-71841144 | Msa1266810:CDS |
| TTTGACGCATATATTCTCCA+GGG | 0.695094 | 8_2:+71842146 | None:intergenic |
| ATACTGTCAAGGAAAAGGAG+AGG | 0.711175 | 8_2:+71841711 | None:intergenic |
| AAAATTGACACCATCCAAGG+AGG | 0.714232 | 8_2:-71841067 | Msa1266810:CDS |
| GGTGACGTAAACAATAGCCG+TGG | 0.719816 | 8_2:+71841457 | None:intergenic |
| GGATCAATGTCATACAATGG+TGG | 0.721707 | 8_2:-71843921 | Msa1266810:CDS |
| ATTAAACGTCAGCTTCAATG+CGG | 0.724013 | 8_2:-71840655 | Msa1266810:CDS |
| AGAACAAAGAGATTGTGCAG+GGG | 0.737676 | 8_2:+71842364 | None:intergenic |
| TATTGATTGGTGGATCACTG+CGG | 0.741849 | 8_2:-71838736 | Msa1266810:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAAGTTTTTATCAAAAATA+GGG | + | chr8_2:71840310-71840329 | None:intergenic | 10.0% |
| !!! | ATTAAGTTTTTATCAAAAAT+AGG | + | chr8_2:71840311-71840330 | None:intergenic | 10.0% |
| !! | ATATATATATATATATAGGA+AGG | - | chr8_2:71842514-71842533 | Msa1266810:intron | 10.0% |
| !!! | TTATTAATTGTTTTGTTATT+TGG | + | chr8_2:71842876-71842895 | None:intergenic | 10.0% |
| !!! | TTTTTTTAATTTCATATAAG+TGG | + | chr8_2:71843154-71843173 | None:intergenic | 10.0% |
| !! | TTGAATAATAATAATTGTTA+GGG | + | chr8_2:71843406-71843425 | None:intergenic | 10.0% |
| !! | ATTGAATAATAATAATTGTT+AGG | + | chr8_2:71843407-71843426 | None:intergenic | 10.0% |
| !! | AAATTTAAATAACTAGAAAA+TGG | + | chr8_2:71844308-71844327 | None:intergenic | 10.0% |
| !! | AGTTATTTAAATTTATTGAT+TGG | - | chr8_2:71844314-71844333 | Msa1266810:intron | 10.0% |
| !! | AGATATCATATAGTTTAAAT+TGG | - | chr8_2:71839497-71839516 | Msa1266810:intron | 15.0% |
| !!! | GATATTTTTACAATTATACA+GGG | + | chr8_2:71839955-71839974 | None:intergenic | 15.0% |
| !!! | AGATATTTTTACAATTATAC+AGG | + | chr8_2:71839956-71839975 | None:intergenic | 15.0% |
| !!! | TTTATTTTATCTTTTGTTGA+AGG | + | chr8_2:71840357-71840376 | None:intergenic | 15.0% |
| !! | AAAAGATATGAATCTAAATT+GGG | + | chr8_2:71840517-71840536 | None:intergenic | 15.0% |
| !! | TAAAAGATATGAATCTAAAT+TGG | + | chr8_2:71840518-71840537 | None:intergenic | 15.0% |
| !! | ATAAAAAAAATGATAGTCAT+CGG | - | chr8_2:71840864-71840883 | Msa1266810:CDS | 15.0% |
| !!! | AAATTGTTGATATTGATAAT+TGG | - | chr8_2:71842109-71842128 | Msa1266810:CDS | 15.0% |
| !!! | AATTGTTGATATTGATAATT+GGG | - | chr8_2:71842110-71842129 | Msa1266810:CDS | 15.0% |
| !! | TTGATTGATATTAGAATTAA+TGG | + | chr8_2:71842587-71842606 | None:intergenic | 15.0% |
| !! | TTAATTCTAATATCAATCAA+TGG | - | chr8_2:71842587-71842606 | Msa1266810:intron | 15.0% |
| !!! | TTAAAAAGGAAATTTTATCT+TGG | - | chr8_2:71842670-71842689 | Msa1266810:intron | 15.0% |
| !!! | TAAAAAGGAAATTTTATCTT+GGG | - | chr8_2:71842671-71842690 | Msa1266810:intron | 15.0% |
| !! | CCATATCAATTATTAATAAT+GGG | + | chr8_2:71842810-71842829 | None:intergenic | 15.0% |
| !! | ACCATATCAATTATTAATAA+TGG | + | chr8_2:71842811-71842830 | None:intergenic | 15.0% |
| !! | TTAATTGATATTGGAATTAA+AGG | - | chr8_2:71843435-71843454 | Msa1266810:intron | 15.0% |
| !!! | TATTTAAATTTATTGATTGG+TGG | - | chr8_2:71844317-71844336 | Msa1266810:intron | 15.0% |
| !!! | CATATCATGAATATTTTTTT+GGG | + | chr8_2:71844444-71844463 | None:intergenic | 15.0% |
| !! | TAGAACAAATAGAACATAAT+GGG | + | chr8_2:71838861-71838880 | None:intergenic | 20.0% |
| !! | ATAGAACAAATAGAACATAA+TGG | + | chr8_2:71838862-71838881 | None:intergenic | 20.0% |
| !! | TCAGAAGTGAAATATAAAAT+GGG | + | chr8_2:71838977-71838996 | None:intergenic | 20.0% |
| !! | ATCAGAAGTGAAATATAAAA+TGG | + | chr8_2:71838978-71838997 | None:intergenic | 20.0% |
| !!! | TTTTTGTACTATTACTTGAT+AGG | - | chr8_2:71839045-71839064 | Msa1266810:intron | 20.0% |
| !!! | TCCTTATGTTCATTTTAATA+TGG | - | chr8_2:71839891-71839910 | Msa1266810:intron | 20.0% |
| !! | ACCATATTAAAATGAACATA+AGG | + | chr8_2:71839895-71839914 | None:intergenic | 20.0% |
| !!! | GGAAAATTTTATAGAACATT+TGG | - | chr8_2:71840552-71840571 | Msa1266810:intron | 20.0% |
| !! | TAAAAAAAATGATAGTCATC+GGG | - | chr8_2:71840865-71840884 | Msa1266810:CDS | 20.0% |
| !!! | TTTTAAACTCAAAGTATCAA+GGG | - | chr8_2:71841377-71841396 | Msa1266810:CDS | 20.0% |
| !!! | AATCTTATGACATCAAATTT+TGG | - | chr8_2:71841847-71841866 | Msa1266810:CDS | 20.0% |
| !!! | ATCTTATGACATCAAATTTT+GGG | - | chr8_2:71841848-71841867 | Msa1266810:CDS | 20.0% |
| !! | TAGAATTAATGGTTAAGATT+TGG | + | chr8_2:71842576-71842595 | None:intergenic | 20.0% |
| !!! | ACTTGTTAAGAAGTTTAAAA+AGG | - | chr8_2:71842656-71842675 | Msa1266810:intron | 20.0% |
| !! | CCCATTATTAATAATTGATA+TGG | - | chr8_2:71842807-71842826 | Msa1266810:intron | 20.0% |
| !!! | TTAATTGTTTTGTTATTTGG+TGG | + | chr8_2:71842873-71842892 | None:intergenic | 20.0% |
| !! | AAATTGTTGTGATAAAAAAG+TGG | + | chr8_2:71842975-71842994 | None:intergenic | 20.0% |
| !!! | ATTTTTCAGATCTTTCTTTA+CGG | - | chr8_2:71842991-71843010 | Msa1266810:intron | 20.0% |
| !!! | TTTTCAGATTTTTCAATTCT+TGG | - | chr8_2:71843041-71843060 | Msa1266810:intron | 20.0% |
| !!! | TTGACGAAATAAAATCTTTT+TGG | - | chr8_2:71843107-71843126 | Msa1266810:intron | 20.0% |
| !!! | TGACGAAATAAAATCTTTTT+GGG | - | chr8_2:71843108-71843127 | Msa1266810:intron | 20.0% |
| !! | ATAACACATCAAAATTGAAA+AGG | + | chr8_2:71843349-71843368 | None:intergenic | 20.0% |
| !!! | GCATATCATGAATATTTTTT+TGG | + | chr8_2:71844445-71844464 | None:intergenic | 20.0% |
| ! | ATAACGAATGAAAGAAGAAA+GGG | + | chr8_2:71838709-71838728 | None:intergenic | 25.0% |
| ! | AATAACGAATGAAAGAAGAA+AGG | + | chr8_2:71838710-71838729 | None:intergenic | 25.0% |
| ! | AAAGAGAGGGAAAAAAAAAA+AGG | + | chr8_2:71838765-71838784 | None:intergenic | 25.0% |
| !!! | ATTAAGCGATTTTAAAGAGA+GGG | + | chr8_2:71838778-71838797 | None:intergenic | 25.0% |
| !!! | AATTAAGCGATTTTAAAGAG+AGG | + | chr8_2:71838779-71838798 | None:intergenic | 25.0% |
| ! | GAATTTGTAACCAATATAGA+TGG | - | chr8_2:71839121-71839140 | Msa1266810:intron | 25.0% |
| !!! | TGATGTGTTTGTTATAAATG+AGG | - | chr8_2:71839363-71839382 | Msa1266810:intron | 25.0% |
| ! | ATGATATCTATCAATAGCAA+AGG | + | chr8_2:71839486-71839505 | None:intergenic | 25.0% |
| ! | AATAGTCATAATATATGCCA+TGG | + | chr8_2:71839836-71839855 | None:intergenic | 25.0% |
| ! | TGGCATATATTATGACTATT+CGG | - | chr8_2:71839836-71839855 | Msa1266810:intron | 25.0% |
| ! | TTATGATGAGATTCACAATT+TGG | - | chr8_2:71840141-71840160 | Msa1266810:intron | 25.0% |
| ! | TATGATGAGATTCACAATTT+GGG | - | chr8_2:71840142-71840161 | Msa1266810:intron | 25.0% |
| !! | AATAAGTTGAAAACAGCTTA+TGG | - | chr8_2:71840437-71840456 | Msa1266810:intron | 25.0% |
| ! | ACTTATTTGATCTTATTGAC+CGG | + | chr8_2:71840481-71840500 | None:intergenic | 25.0% |
| !! | TCTTTTACATGTGAATTGTT+TGG | - | chr8_2:71840531-71840550 | Msa1266810:intron | 25.0% |
| ! | AGTTAAATTATTCTCAAGCA+TGG | - | chr8_2:71841131-71841150 | Msa1266810:CDS | 25.0% |
| ! | TTTATCTTCTCACAAAAGAA+TGG | + | chr8_2:71841220-71841239 | None:intergenic | 25.0% |
| ! | AGTTTAAAAGAATACTGTCA+AGG | + | chr8_2:71841366-71841385 | None:intergenic | 25.0% |
| !!! | CTTTTAAACTCAAAGTATCA+AGG | - | chr8_2:71841376-71841395 | Msa1266810:CDS | 25.0% |
| !! | TTTAAACTCAAAGTATCAAG+GGG | - | chr8_2:71841378-71841397 | Msa1266810:CDS | 25.0% |
| !! | CGTAGTATTGAGAATATAAA+AGG | - | chr8_2:71841742-71841761 | Msa1266810:CDS | 25.0% |
| ! | CTAATATCAATCAATGGTTT+AGG | - | chr8_2:71842593-71842612 | Msa1266810:intron | 25.0% |
| !!! | TGGTTTAGGTTGATTATTAA+TGG | - | chr8_2:71842607-71842626 | Msa1266810:intron | 25.0% |
| !!! | GGTTTAGGTTGATTATTAAT+GGG | - | chr8_2:71842608-71842627 | Msa1266810:intron | 25.0% |
| ! | ATTATATGTGTCAATTGAAG+AGG | + | chr8_2:71843076-71843095 | None:intergenic | 25.0% |
| ! | AATAATAATTGTTAGGGTGA+GGG | + | chr8_2:71843400-71843419 | None:intergenic | 25.0% |
| ! | TAATAATAATTGTTAGGGTG+AGG | + | chr8_2:71843401-71843420 | None:intergenic | 25.0% |
| ! | TCCTAGTCATTAATTGATAT+TGG | - | chr8_2:71843426-71843445 | Msa1266810:intron | 25.0% |
| ! | TCCAATATCAATTAATGACT+AGG | + | chr8_2:71843430-71843449 | None:intergenic | 25.0% |
| ! | TATATATATATATGCGCACT+AGG | - | chr8_2:71843542-71843561 | Msa1266810:intron | 25.0% |
| ! | TCAATTGTGCATTAAATAAC+TGG | - | chr8_2:71843614-71843633 | Msa1266810:intron | 25.0% |
| ! | TGCTACATAGTTAGTTATAT+AGG | - | chr8_2:71843754-71843773 | Msa1266810:CDS | 25.0% |
| !! | AAATATGGAGAAACGTTTTA+GGG | - | chr8_2:71844094-71844113 | Msa1266810:intron | 25.0% |
| ! | ATCAGTTAGTTATTGTTATC+CGG | - | chr8_2:71844205-71844224 | Msa1266810:intron | 25.0% |
| !! | TTTAGATAGATTTTGTGTGT+AGG | - | chr8_2:71844273-71844292 | Msa1266810:intron | 25.0% |
| ! | ATAACAGAAACACATTAATC+TGG | + | chr8_2:71844491-71844510 | None:intergenic | 25.0% |
| CTAAACGTGAATAAAAGAGA+GGG | + | chr8_2:71838735-71838754 | None:intergenic | 30.0% | |
| ! | CTCTCTTTTATTCACGTTTA+GGG | - | chr8_2:71838734-71838753 | Msa1266810:three_prime_UTR | 30.0% |
| AAAATCGCTTAATTCTCATG+TGG | - | chr8_2:71838785-71838804 | Msa1266810:three_prime_UTR | 30.0% | |
| AAATCGCTTAATTCTCATGT+GGG | - | chr8_2:71838786-71838805 | Msa1266810:three_prime_UTR | 30.0% | |
| ATAGCTATATGTCAATCAAG+AGG | - | chr8_2:71839097-71839116 | Msa1266810:intron | 30.0% | |
| TGACATTGATCCATCTATAT+TGG | + | chr8_2:71839134-71839153 | None:intergenic | 30.0% | |
| TTATGCAATTGACATTGATC+AGG | - | chr8_2:71839171-71839190 | Msa1266810:intron | 30.0% | |
| TACATTGCAATTGAAGGTTT+CGG | + | chr8_2:71839230-71839249 | None:intergenic | 30.0% | |
| !! | GTTTGTTATAAATGAGGAAG+TGG | - | chr8_2:71839369-71839388 | Msa1266810:intron | 30.0% |
| ! | TTGAACCATATTTTACAGCA+TGG | - | chr8_2:71839585-71839604 | Msa1266810:intron | 30.0% |
| GTTAACCATGCTGTAAAATA+TGG | + | chr8_2:71839593-71839612 | None:intergenic | 30.0% | |
| CAATCGATACAAATATCTAG+TGG | - | chr8_2:71839627-71839646 | Msa1266810:intron | 30.0% | |
| ATGGAAACAAACGTAAAACA+TGG | + | chr8_2:71840210-71840229 | None:intergenic | 30.0% | |
| AAGTTATTCTGTAGAGCTTA+TGG | - | chr8_2:71840413-71840432 | Msa1266810:intron | 30.0% | |
| ATCAAATAAGTCAATCCAAC+TGG | - | chr8_2:71840490-71840509 | Msa1266810:intron | 30.0% | |
| TCAAATAAGTCAATCCAACT+GGG | - | chr8_2:71840491-71840510 | Msa1266810:intron | 30.0% | |
| !! | TATAGAACATTTGGTAATGC+AGG | - | chr8_2:71840561-71840580 | Msa1266810:intron | 30.0% |
| ACATTAATAGGGATAACAAC+AGG | + | chr8_2:71840620-71840639 | None:intergenic | 30.0% | |
| CGCTAAAACTATTAAACCTT+TGG | + | chr8_2:71840790-71840809 | None:intergenic | 30.0% | |
| AAGATAAAAGAGACTAATCC+TGG | - | chr8_2:71841232-71841251 | Msa1266810:CDS | 30.0% | |
| AGATAAAAGAGACTAATCCT+GGG | - | chr8_2:71841233-71841252 | Msa1266810:CDS | 30.0% | |
| AGGCATGAAATGATACAAAA+AGG | + | chr8_2:71841303-71841322 | None:intergenic | 30.0% | |
| AAAGAATACTGTCAAGGAAA+AGG | + | chr8_2:71841360-71841379 | None:intergenic | 30.0% | |
| ! | AAAGTATCAAGGGGAATTAT+TGG | - | chr8_2:71841387-71841406 | Msa1266810:CDS | 30.0% |
| ! | TTTGTTGCAGATTTTCAGAA+TGG | - | chr8_2:71841544-71841563 | Msa1266810:CDS | 30.0% |
| ! | TTGTTGCAGATTTTCAGAAT+GGG | - | chr8_2:71841545-71841564 | Msa1266810:CDS | 30.0% |
| ! | GTTTTCAAATATCTCAGACA+AGG | + | chr8_2:71841581-71841600 | None:intergenic | 30.0% |
| ATATTTGAAAACTGCTACCA+CGG | - | chr8_2:71841589-71841608 | Msa1266810:CDS | 30.0% | |
| AAACTGAACAAGGACTTAAA+GGG | - | chr8_2:71841637-71841656 | Msa1266810:CDS | 30.0% | |
| ATACTACGTTCAAAAATCTC+CGG | + | chr8_2:71841730-71841749 | None:intergenic | 30.0% | |
| ACATCAATCATTTGAGTGAT+TGG | + | chr8_2:71841913-71841932 | None:intergenic | 30.0% | |
| CAAATGATTGATGTATTACG+AGG | - | chr8_2:71841919-71841938 | Msa1266810:CDS | 30.0% | |
| ATCGGGAACAATAATCATAT+AGG | + | chr8_2:71842215-71842234 | None:intergenic | 30.0% | |
| AATTCTCAACTGTGAAGTAT+CGG | + | chr8_2:71842233-71842252 | None:intergenic | 30.0% | |
| ATTGAAGCTGACGTTTAATT+AGG | + | chr8_2:71842407-71842426 | None:intergenic | 30.0% | |
| ! | AGGGATAAATTTTGCAAAAG+AGG | + | chr8_2:71842927-71842946 | None:intergenic | 30.0% |
| AATAGTCCAAGAATTGAACA+AGG | + | chr8_2:71842951-71842970 | None:intergenic | 30.0% | |
| ! | CATCCAAAAAAGTTGATTTC+CGG | - | chr8_2:71843232-71843251 | Msa1266810:intron | 30.0% |
| !!! | ATTCCGGAAATCAACTTTTT+TGG | + | chr8_2:71843238-71843257 | None:intergenic | 30.0% |
| ! | AAAAAAGTTGATTTCCGGAA+TGG | - | chr8_2:71843237-71843256 | Msa1266810:intron | 30.0% |
| ! | AGATGCATAATACTGGTTAT+TGG | - | chr8_2:71843973-71843992 | Msa1266810:CDS | 30.0% |
| ! | GATGCATAATACTGGTTATT+GGG | - | chr8_2:71843974-71843993 | Msa1266810:CDS | 30.0% |
| AATGAAGCAAGATGCAAATA+TGG | - | chr8_2:71844079-71844098 | Msa1266810:intron | 30.0% | |
| ! | CAAATATGGAGAAACGTTTT+AGG | - | chr8_2:71844093-71844112 | Msa1266810:intron | 30.0% |
| ! | AATATGGAGAAACGTTTTAG+GGG | - | chr8_2:71844095-71844114 | Msa1266810:intron | 30.0% |
| AAGCTAACTAATCTCTAAGT+AGG | + | chr8_2:71844165-71844184 | None:intergenic | 30.0% | |
| !! | TGAAGTAATTTGTTCTCTAC+CGG | + | chr8_2:71844227-71844246 | None:intergenic | 30.0% |
| AGAGAACAAATTACTTCATC+TGG | - | chr8_2:71844229-71844248 | Msa1266810:intron | 30.0% | |
| GAGAAATTGAGCTCTTTCAT+TGG | - | chr8_2:71838630-71838649 | Msa1266810:three_prime_UTR | 35.0% | |
| AAGAGAGAGAGAAACCTAAA+GGG | + | chr8_2:71838680-71838699 | None:intergenic | 35.0% | |
| CCTAAACGTGAATAAAAGAG+AGG | + | chr8_2:71838736-71838755 | None:intergenic | 35.0% | |
| ! | CCTCTCTTTTATTCACGTTT+AGG | - | chr8_2:71838733-71838752 | Msa1266810:three_prime_UTR | 35.0% |
| ! | TCAACCACACTTCACAATTT+TGG | - | chr8_2:71838909-71838928 | Msa1266810:three_prime_UTR | 35.0% |
| ! | CAACCACACTTCACAATTTT+GGG | - | chr8_2:71838910-71838929 | Msa1266810:three_prime_UTR | 35.0% |
| TACTATTACTTGATAGGCCA+TGG | - | chr8_2:71839051-71839070 | Msa1266810:intron | 35.0% | |
| GATGGATCAATGTCATACAA+TGG | - | chr8_2:71839139-71839158 | Msa1266810:intron | 35.0% | |
| !! | AAGGAAGTACTTGATGTTCA+TGG | + | chr8_2:71839257-71839276 | None:intergenic | 35.0% |
| ! | CATTACAGTGTCGAAAGATA+AGG | - | chr8_2:71839297-71839316 | Msa1266810:intron | 35.0% |
| CGAAAGATAAGGATTTGCAA+CGG | - | chr8_2:71839308-71839327 | Msa1266810:intron | 35.0% | |
| TGTTATAAATGAGGAAGTGG+TGG | - | chr8_2:71839372-71839391 | Msa1266810:intron | 35.0% | |
| CAGGGATTCATCTTCAAAAT+AGG | + | chr8_2:71839659-71839678 | None:intergenic | 35.0% | |
| AATGAACCAAGACTCAAACA+GGG | + | chr8_2:71839677-71839696 | None:intergenic | 35.0% | |
| TAATGAACCAAGACTCAAAC+AGG | + | chr8_2:71839678-71839697 | None:intergenic | 35.0% | |
| CTGTGATGTGATTCACAATT+CGG | - | chr8_2:71839715-71839734 | Msa1266810:intron | 35.0% | |
| TGATTCACAATTCGGAAAGT+AGG | - | chr8_2:71839723-71839742 | Msa1266810:intron | 35.0% | |
| ! | CATGTTTTACAGTTGTCATC+CGG | - | chr8_2:71839782-71839801 | Msa1266810:intron | 35.0% |
| ATGGTTGTGACCAAAATGAA+TGG | - | chr8_2:71839810-71839829 | Msa1266810:intron | 35.0% | |
| ATGATGTCTATCGATAGCAA+AGG | + | chr8_2:71839919-71839938 | None:intergenic | 35.0% | |
| ! | TCTAACCACATTTTACAGCA+TGG | - | chr8_2:71840015-71840034 | Msa1266810:intron | 35.0% |
| ATGAACCATGCTGTAAAATG+TGG | + | chr8_2:71840023-71840042 | None:intergenic | 35.0% | |
| AGATTCACAATTTGGGAAGT+AGG | - | chr8_2:71840149-71840168 | Msa1266810:intron | 35.0% | |
| ! | ACGTAGGTCGGATTTTTATA+TGG | + | chr8_2:71840229-71840248 | None:intergenic | 35.0% |
| ! | TATGCTATGGCCATTCATTT+TGG | + | chr8_2:71840274-71840293 | None:intergenic | 35.0% |
| CCAATGTCTAACATATGCTA+TGG | + | chr8_2:71840287-71840306 | None:intergenic | 35.0% | |
| CCATAGCATATGTTAGACAT+TGG | - | chr8_2:71840284-71840303 | Msa1266810:intron | 35.0% | |
| CAATGGCTGCTACATTAATA+GGG | + | chr8_2:71840631-71840650 | None:intergenic | 35.0% | |
| TCAATGGCTGCTACATTAAT+AGG | + | chr8_2:71840632-71840651 | None:intergenic | 35.0% | |
| AGTATTTATGCAATGCCTCT+CGG | + | chr8_2:71840817-71840836 | None:intergenic | 35.0% | |
| CATAAATACTCCATTGCTCA+TGG | - | chr8_2:71840827-71840846 | Msa1266810:CDS | 35.0% | |
| ACGGTCAAATGTAAATCTCA+AGG | - | chr8_2:71840890-71840909 | Msa1266810:CDS | 35.0% | |
| TTTGACGCATATATTCTCCA+GGG | + | chr8_2:71840920-71840939 | None:intergenic | 35.0% | |
| ATATCCTTTGGCCTGTAATT+GGG | + | chr8_2:71841079-71841098 | None:intergenic | 35.0% | |
| GAAATGATACAAAAAGGCGA+TGG | + | chr8_2:71841297-71841316 | None:intergenic | 35.0% | |
| TCATTTCATGCCTCAATAAC+TGG | - | chr8_2:71841310-71841329 | Msa1266810:CDS | 35.0% | |
| CAAACTGAACAAGGACTTAA+AGG | - | chr8_2:71841636-71841655 | Msa1266810:CDS | 35.0% | |
| AAAGGGACAATTATCTCATG+AGG | - | chr8_2:71841654-71841673 | Msa1266810:CDS | 35.0% | |
| ATCATTAACCATGAAACGTC+TGG | + | chr8_2:71841680-71841699 | None:intergenic | 35.0% | |
| ! | TTGGGCAGCAATTTTATTGT+TGG | - | chr8_2:71841866-71841885 | Msa1266810:CDS | 35.0% |
| ! | TGGGCAGCAATTTTATTGTT+GGG | - | chr8_2:71841867-71841886 | Msa1266810:CDS | 35.0% |
| ! | ATTTTATTGTTGGGTGTCAG+AGG | - | chr8_2:71841876-71841895 | Msa1266810:CDS | 35.0% |
| TGTATTACGAGGTAACATGA+TGG | - | chr8_2:71841930-71841949 | Msa1266810:CDS | 35.0% | |
| AACAAAATTGACACCATCCA+AGG | - | chr8_2:71841993-71842012 | Msa1266810:CDS | 35.0% | |
| ! | CTTTTGGATAATTTCCTCCT+TGG | + | chr8_2:71842013-71842032 | None:intergenic | 35.0% |
| CAAGGAGGAAATTATCCAAA+AGG | - | chr8_2:71842011-71842030 | Msa1266810:CDS | 35.0% | |
| ATTCAAAGACAGCAATAGCA+TGG | + | chr8_2:71842179-71842198 | None:intergenic | 35.0% | |
| ATTGCTGTCTTTGAATGTGT+TGG | - | chr8_2:71842183-71842202 | Msa1266810:CDS | 35.0% | |
| ! | TGTCTTTGAATGTGTTGGTA+GGG | - | chr8_2:71842188-71842207 | Msa1266810:CDS | 35.0% |
| ! | ATTCTCAACTGTGAAGTATC+GGG | + | chr8_2:71842232-71842251 | None:intergenic | 35.0% |
| !! | GATTCAACCTGCTTTGATTT+TGG | + | chr8_2:71842378-71842397 | None:intergenic | 35.0% |
| ATTAAACGTCAGCTTCAATG+CGG | - | chr8_2:71842408-71842427 | Msa1266810:CDS | 35.0% | |
| AAATGTTAACAAGTGCCCTT+GGG | - | chr8_2:71842631-71842650 | Msa1266810:intron | 35.0% | |
| TCCAAGAATTGAACAAGGAA+GGG | + | chr8_2:71842946-71842965 | None:intergenic | 35.0% | |
| ! | GATGATGATGATGATGATGA+TGG | - | chr8_2:71843291-71843310 | Msa1266810:intron | 35.0% |
| ! | GGTTAAATCGTTTTCTCTAC+TGG | + | chr8_2:71843379-71843398 | None:intergenic | 35.0% |
| CAAGAGTAAGTCTATAGACT+AGG | + | chr8_2:71843483-71843502 | None:intergenic | 35.0% | |
| CTAGTCTATAGACTTACTCT+TGG | - | chr8_2:71843481-71843500 | Msa1266810:intron | 35.0% | |
| TGAAAATATGCACACACAAC+TGG | + | chr8_2:71843591-71843610 | None:intergenic | 35.0% | |
| TATCCTCACTAGAGTTCAAA+TGG | + | chr8_2:71843784-71843803 | None:intergenic | 35.0% | |
| GAATGTCTTATACGAAGACA+TGG | + | chr8_2:71843860-71843879 | None:intergenic | 35.0% | |
| TTATGCATCTACAGACTACA+TGG | + | chr8_2:71843963-71843982 | None:intergenic | 35.0% | |
| AGTCTGTAGATGCATAATAC+TGG | - | chr8_2:71843966-71843985 | Msa1266810:CDS | 35.0% | |
| AATTACTTCATCTGGCAAAC+TGG | - | chr8_2:71844237-71844256 | Msa1266810:intron | 35.0% | |
| ! | AGAAGTTAGTTTCTCCTAGT+TGG | - | chr8_2:71844390-71844409 | Msa1266810:intron | 35.0% |
| CCTAAAAACAAAGCTACATC+TGG | + | chr8_2:71844421-71844440 | None:intergenic | 35.0% | |
| !!! | CCAGATGTAGCTTTGTTTTT+AGG | - | chr8_2:71844418-71844437 | Msa1266810:five_prime_UTR | 35.0% |
| CATTAATCTGGTCATGCAAT+TGG | + | chr8_2:71844479-71844498 | None:intergenic | 35.0% | |
| TTGAGCTCTTTCATTGGTGA+CGG | - | chr8_2:71838636-71838655 | Msa1266810:three_prime_UTR | 40.0% | |
| GAAGAGAGAGAGAAACCTAA+AGG | + | chr8_2:71838681-71838700 | None:intergenic | 40.0% | |
| ATGCCCAAAATTGTGAAGTG+TGG | + | chr8_2:71838916-71838935 | None:intergenic | 40.0% | |
| GGATCAATGTCATACAATGG+TGG | - | chr8_2:71839142-71839161 | Msa1266810:intron | 40.0% | |
| GGTGCTTACATTGCAATTGA+AGG | + | chr8_2:71839236-71839255 | None:intergenic | 40.0% | |
| AACATCAAGTACTTCCTTCC+TGG | - | chr8_2:71839259-71839278 | Msa1266810:intron | 40.0% | |
| ! | ATGAGCGTTTTCTTATTGCC+AGG | + | chr8_2:71839280-71839299 | None:intergenic | 40.0% |
| AGATAAGGATTTGCAACGGA+TGG | - | chr8_2:71839312-71839331 | Msa1266810:intron | 40.0% | |
| GTGAATAACTACCTACTAGC+AGG | + | chr8_2:71839418-71839437 | None:intergenic | 40.0% | |
| ATGAATCCCTGTTTGAGTCT+TGG | - | chr8_2:71839668-71839687 | Msa1266810:intron | 40.0% | |
| GAATCACATCACAGTGAATC+AGG | + | chr8_2:71839709-71839728 | None:intergenic | 40.0% | |
| CGGATGACAACTGTAAAACA+TGG | + | chr8_2:71839784-71839803 | None:intergenic | 40.0% | |
| TTGGTCACAACCATGATATC+CGG | + | chr8_2:71839804-71839823 | None:intergenic | 40.0% | |
| ! | TATGCCATGGCCATTCATTT+TGG | + | chr8_2:71839823-71839842 | None:intergenic | 40.0% |
| GTGGATGTGACCAAAATGAA+TGG | - | chr8_2:71840261-71840280 | Msa1266810:intron | 40.0% | |
| GATATGTCAAGTGCTTATGC+CGG | - | chr8_2:71840459-71840478 | Msa1266810:intron | 40.0% | |
| AATGCATTGCTCAGCATCAA+TGG | + | chr8_2:71840648-71840667 | None:intergenic | 40.0% | |
| AGAACAAAGAGATTGTGCAG+GGG | + | chr8_2:71840702-71840721 | None:intergenic | 40.0% | |
| CAGAACAAAGAGATTGTGCA+GGG | + | chr8_2:71840703-71840722 | None:intergenic | 40.0% | |
| CTGCACAATCTCTTTGTTCT+GGG | - | chr8_2:71840702-71840721 | Msa1266810:CDS | 40.0% | |
| TGCACAATCTCTTTGTTCTG+GGG | - | chr8_2:71840703-71840722 | Msa1266810:CDS | 40.0% | |
| TCTTTGACGCTTGTCATCAT+TGG | + | chr8_2:71840729-71840748 | None:intergenic | 40.0% | |
| !!! | TAGTTTTAGCGAATTCCGAG+AGG | - | chr8_2:71840799-71840818 | Msa1266810:CDS | 40.0% |
| GTAAGCAAAACCATGAGCAA+TGG | + | chr8_2:71840840-71840859 | None:intergenic | 40.0% | |
| AAATGATAGTCATCGGGTCA+CGG | - | chr8_2:71840871-71840890 | Msa1266810:CDS | 40.0% | |
| CTTTGACGCATATATTCTCC+AGG | + | chr8_2:71840921-71840940 | None:intergenic | 40.0% | |
| CTTGATGCAAATCAACTGAG+TGG | + | chr8_2:71840951-71840970 | None:intergenic | 40.0% | |
| ACCAGAGATCATACTTGTGA+AGG | - | chr8_2:71840977-71840996 | Msa1266810:CDS | 40.0% | |
| TCCTTCACAAGTATGATCTC+TGG | + | chr8_2:71840981-71841000 | None:intergenic | 40.0% | |
| TGAAAGCTTCACCCAATTAC+AGG | - | chr8_2:71841065-71841084 | Msa1266810:CDS | 40.0% | |
| GATATCCTTTGGCCTGTAAT+TGG | + | chr8_2:71841080-71841099 | None:intergenic | 40.0% | |
| ACTCCAAGGCTCTTATAAAG+AGG | - | chr8_2:71841180-71841199 | Msa1266810:CDS | 40.0% | |
| ATGCCTCTTTATAAGAGCCT+TGG | + | chr8_2:71841186-71841205 | None:intergenic | 40.0% | |
| TGCAACATTCACGACAAAAG+AGG | - | chr8_2:71841261-71841280 | Msa1266810:CDS | 40.0% | |
| ! | ATGCCTCAATAACTGGTTTC+CGG | - | chr8_2:71841317-71841336 | Msa1266810:CDS | 40.0% |
| TACTGTCAAGGAAAAGGAGA+GGG | + | chr8_2:71841354-71841373 | None:intergenic | 40.0% | |
| ATACTGTCAAGGAAAAGGAG+AGG | + | chr8_2:71841355-71841374 | None:intergenic | 40.0% | |
| ACTTCTGTCGATGGAAATGA+TGG | - | chr8_2:71841415-71841434 | Msa1266810:CDS | 40.0% | |
| ATGCCAGTTGTCTTCAGTTT+CGG | + | chr8_2:71841473-71841492 | None:intergenic | 40.0% | |
| AAACTGAAGACAACTGGCAT+TGG | - | chr8_2:71841473-71841492 | Msa1266810:CDS | 40.0% | |
| ACGTTCAAAAATCTCCGGTT+TGG | + | chr8_2:71841725-71841744 | None:intergenic | 40.0% | |
| TTTCTCCTGAAGCATACAAC+TGG | - | chr8_2:71841767-71841786 | Msa1266810:CDS | 40.0% | |
| TTCTCCTGAAGCATACAACT+GGG | - | chr8_2:71841768-71841787 | Msa1266810:CDS | 40.0% | |
| TGGTCCAATGCATTCTTCAA+TGG | - | chr8_2:71841814-71841833 | Msa1266810:CDS | 40.0% | |
| TGCTCCATTGAAGAATGCAT+TGG | + | chr8_2:71841821-71841840 | None:intergenic | 40.0% | |
| ATGCATTCTTCAATGGAGCA+AGG | - | chr8_2:71841821-71841840 | Msa1266810:CDS | 40.0% | |
| AAAATTGACACCATCCAAGG+AGG | - | chr8_2:71841996-71842015 | Msa1266810:CDS | 40.0% | |
| TGGATAATTTCCTCCTTGGA+TGG | + | chr8_2:71842009-71842028 | None:intergenic | 40.0% | |
| TTGTCCACAGACTTCAAATG+TGG | + | chr8_2:71842082-71842101 | None:intergenic | 40.0% | |
| TAATTGGGATTGTAGCTGCA+AGG | - | chr8_2:71842125-71842144 | Msa1266810:CDS | 40.0% | |
| AATTGGGATTGTAGCTGCAA+GGG | - | chr8_2:71842126-71842145 | Msa1266810:CDS | 40.0% | |
| ! | CTGTCTTTGAATGTGTTGGT+AGG | - | chr8_2:71842187-71842206 | Msa1266810:CDS | 40.0% |
| !! | TGGACTGGTTTGTCAATATC+TGG | + | chr8_2:71842291-71842310 | None:intergenic | 40.0% |
| AGATATTGACAAACCAGTCC+AGG | - | chr8_2:71842290-71842309 | Msa1266810:CDS | 40.0% | |
| CTTCAATGCGGTAAATGCAA+GGG | - | chr8_2:71842420-71842439 | Msa1266810:CDS | 40.0% | |
| GAAATGTTAACAAGTGCCCT+TGG | - | chr8_2:71842630-71842649 | Msa1266810:intron | 40.0% | |
| AATGTTAACAAGTGCCCTTG+GGG | - | chr8_2:71842632-71842651 | Msa1266810:intron | 40.0% | |
| AATCCTTAACTAGTGCCCTA+AGG | - | chr8_2:71842768-71842787 | Msa1266810:intron | 40.0% | |
| ATCCTTAACTAGTGCCCTAA+GGG | - | chr8_2:71842769-71842788 | Msa1266810:intron | 40.0% | |
| CTTGTTAACCAATGCCCTTA+GGG | + | chr8_2:71842786-71842805 | None:intergenic | 40.0% | |
| TCTTGTTAACCAATGCCCTT+AGG | + | chr8_2:71842787-71842806 | None:intergenic | 40.0% | |
| TCCCTTCCTTGTTCAATTCT+TGG | - | chr8_2:71842942-71842961 | Msa1266810:intron | 40.0% | |
| GTCCAAGAATTGAACAAGGA+AGG | + | chr8_2:71842947-71842966 | None:intergenic | 40.0% | |
| ! | AAAGTTGATTTCCGGAATGG+AGG | - | chr8_2:71843240-71843259 | Msa1266810:intron | 40.0% |
| GCACTAACACTTCAGATTGA+AGG | + | chr8_2:71843737-71843756 | None:intergenic | 40.0% | |
| CTCACTAGAGTTCAAATGGA+TGG | + | chr8_2:71843780-71843799 | None:intergenic | 40.0% | |
| CATCCATTTGAACTCTAGTG+AGG | - | chr8_2:71843778-71843797 | Msa1266810:CDS | 40.0% | |
| TTGAACTCTAGTGAGGATAC+TGG | - | chr8_2:71843785-71843804 | Msa1266810:CDS | 40.0% | |
| AGACAGTAGCTACAAACTAC+TGG | + | chr8_2:71843925-71843944 | None:intergenic | 40.0% | |
| ! | ACTTTGTCATTGTTGCTTGC+TGG | + | chr8_2:71844019-71844038 | None:intergenic | 40.0% |
| ! | TGAAACATTTTGCCTGACAC+AGG | - | chr8_2:71844048-71844067 | Msa1266810:intron | 40.0% |
| ! | GAAACATTTTGCCTGACACA+GGG | - | chr8_2:71844049-71844068 | Msa1266810:intron | 40.0% |
| !!! | GAAACGTTTTAGGGGTTGTA+TGG | - | chr8_2:71844103-71844122 | Msa1266810:intron | 40.0% |
| ! | AAGTAGGAAGCACGTGAATT+TGG | + | chr8_2:71844149-71844168 | None:intergenic | 40.0% |
| ! | TATTGATTGGTGGATCACTG+CGG | - | chr8_2:71844327-71844346 | Msa1266810:intron | 40.0% |
| ! | AGTTAGTTTCTCCTAGTTGG+AGG | - | chr8_2:71844393-71844412 | Msa1266810:intron | 40.0% |
| AGACAGGAAATACGTTGTCG+TGG | - | chr8_2:71838579-71838598 | Msa1266810:three_prime_UTR | 45.0% | |
| TATCCTCCATTCTGCCCTTT+AGG | - | chr8_2:71838663-71838682 | Msa1266810:three_prime_UTR | 45.0% | |
| AAACCTAAAGGGCAGAATGG+AGG | + | chr8_2:71838669-71838688 | None:intergenic | 45.0% | |
| GAGAAACCTAAAGGGCAGAA+TGG | + | chr8_2:71838672-71838691 | None:intergenic | 45.0% | |
| ! | GCGTTTTCTTATTGCCAGGA+AGG | + | chr8_2:71839276-71839295 | None:intergenic | 45.0% |
| !! | CAACGGATGGTTAGTTTCCT+TGG | - | chr8_2:71839325-71839344 | Msa1266810:intron | 45.0% |
| TAAATGAGGAAGTGGTGGCT+CGG | - | chr8_2:71839377-71839396 | Msa1266810:intron | 45.0% | |
| CAGTTGTCATCCGGATATCA+TGG | - | chr8_2:71839791-71839810 | Msa1266810:intron | 45.0% | |
| GTGACCAAAATGAATGGCCA+TGG | - | chr8_2:71839816-71839835 | Msa1266810:intron | 45.0% | |
| GACATCGCAATTACGTAGGT+CGG | + | chr8_2:71840241-71840260 | None:intergenic | 45.0% | |
| GAATCTAAATTGGGCCCAGT+TGG | + | chr8_2:71840508-71840527 | None:intergenic | 45.0% | |
| CCAGAACAAAGAGATTGTGC+AGG | + | chr8_2:71840704-71840723 | None:intergenic | 45.0% | |
| CCTGCACAATCTCTTTGTTC+TGG | - | chr8_2:71840701-71840720 | Msa1266810:CDS | 45.0% | |
| TGATGACAAGCGTCAAAGAG+CGG | - | chr8_2:71840730-71840749 | Msa1266810:CDS | 45.0% | |
| CAGTGGGAAAATACCATCAC+TGG | - | chr8_2:71840758-71840777 | Msa1266810:CDS | 45.0% | |
| AAGGATCTGCTGTCAAAGCT+GGG | - | chr8_2:71840996-71841015 | Msa1266810:CDS | 45.0% | |
| TTCACCCAATTACAGGCCAA+AGG | - | chr8_2:71841072-71841091 | Msa1266810:CDS | 45.0% | |
| ATGTCGTCTGCGATATCCTT+TGG | + | chr8_2:71841091-71841110 | None:intergenic | 45.0% | |
| ACGACATAAAGCGCGAGTAT+GGG | - | chr8_2:71841104-71841123 | Msa1266810:CDS | 45.0% | |
| ATTGCTAGAGAGCAACTCCA+AGG | - | chr8_2:71841166-71841185 | Msa1266810:CDS | 45.0% | |
| GTGAATGTTGCAAAACTCCC+AGG | + | chr8_2:71841253-71841272 | None:intergenic | 45.0% | |
| TTGCCGGAAACCAGTTATTG+AGG | + | chr8_2:71841323-71841342 | None:intergenic | 45.0% | |
| TCTACAACAGCAAAGGCTAC+AGG | + | chr8_2:71841448-71841467 | None:intergenic | 45.0% | |
| TTCGGCATCTACAACAGCAA+AGG | + | chr8_2:71841455-71841474 | None:intergenic | 45.0% | |
| ATGCCGAAACTGAAGACAAC+TGG | - | chr8_2:71841467-71841486 | Msa1266810:CDS | 45.0% | |
| !! | CAACTGGCATTGGTTTCTTC+AGG | - | chr8_2:71841483-71841502 | Msa1266810:CDS | 45.0% |
| CCTTGTTCAGTTTGTCAGCA+AGG | + | chr8_2:71841630-71841649 | None:intergenic | 45.0% | |
| CCTTGCTGACAAACTGAACA+AGG | - | chr8_2:71841627-71841646 | Msa1266810:CDS | 45.0% | |
| ATGACCCAGTTGTATGCTTC+AGG | + | chr8_2:71841775-71841794 | None:intergenic | 45.0% | |
| AACAATTAGCACACGACGAG+AGG | - | chr8_2:71841954-71841973 | Msa1266810:CDS | 45.0% | |
| GACGAGAGGAGTCTAATCAA+TGG | - | chr8_2:71841968-71841987 | Msa1266810:CDS | 45.0% | |
| ! | GAGCGTCTGATGTTTCCTTT+TGG | + | chr8_2:71842029-71842048 | None:intergenic | 45.0% |
| !! | CTACAGGTGTTGCTTTCACA+AGG | - | chr8_2:71842054-71842073 | Msa1266810:CDS | 45.0% |
| ! | GGTACCACATTTGAAGTCTG+TGG | - | chr8_2:71842075-71842094 | Msa1266810:CDS | 45.0% |
| TGCAAGGGATGGAAACTTAC+TGG | - | chr8_2:71842141-71842160 | Msa1266810:CDS | 45.0% | |
| ATATCTGGCAGAGCGTGAAT+TGG | + | chr8_2:71842276-71842295 | None:intergenic | 45.0% | |
| ! | CAAACCAGTCCAGGTTGAAT+CGG | - | chr8_2:71842299-71842318 | Msa1266810:CDS | 45.0% |
| GCTTCAATGCGGTAAATGCA+AGG | - | chr8_2:71842419-71842438 | Msa1266810:CDS | 45.0% | |
| CTTCTTAACAAGTGCCCCAA+GGG | + | chr8_2:71842649-71842668 | None:intergenic | 45.0% | |
| ACTTCTTAACAAGTGCCCCA+AGG | + | chr8_2:71842650-71842669 | None:intergenic | 45.0% | |
| TATATATGCGCACTAGGTCG+AGG | - | chr8_2:71843548-71843567 | Msa1266810:intron | 45.0% | |
| GTCTTATACGAAGACATGGC+AGG | + | chr8_2:71843856-71843875 | None:intergenic | 45.0% | |
| GCATCTACAGACTACATGGA+TGG | + | chr8_2:71843959-71843978 | None:intergenic | 45.0% | |
| CATTGAAGATTCCCTGTGTC+AGG | + | chr8_2:71844063-71844082 | None:intergenic | 45.0% | |
| !! | TATATATATATATATATTGA+GGG | + | chr8_2:71842509-71842528 | None:intergenic | 5.0% |
| !! | ATATATATATATATATATTG+AGG | + | chr8_2:71842510-71842529 | None:intergenic | 5.0% |
| !! | CAATATATATATATATATAT+AGG | - | chr8_2:71842510-71842529 | Msa1266810:intron | 5.0% |
| !! | TATATATATATATATATATG+AGG | + | chr8_2:71843536-71843555 | None:intergenic | 5.0% |
| TACGTTGTCGTGGTCATCGT+AGG | - | chr8_2:71838589-71838608 | Msa1266810:three_prime_UTR | 50.0% | |
| ACGTTGTCGTGGTCATCGTA+GGG | - | chr8_2:71838590-71838609 | Msa1266810:three_prime_UTR | 50.0% | |
| CTTTGTAGCTGTAGCAGCCA+TGG | + | chr8_2:71839071-71839090 | None:intergenic | 50.0% | |
| CAACAGTGCTAGCATCTCCA+AGG | + | chr8_2:71839345-71839364 | None:intergenic | 50.0% | |
| CATCCAACATGCCTGCTAGT+AGG | - | chr8_2:71839404-71839423 | Msa1266810:intron | 50.0% | |
| CTACCTACTAGCAGGCATGT+TGG | + | chr8_2:71839410-71839429 | None:intergenic | 50.0% | |
| CCACGACATCGCAATTACGT+AGG | + | chr8_2:71840245-71840264 | None:intergenic | 50.0% | |
| CCTACGTAATTGCGATGTCG+TGG | - | chr8_2:71840242-71840261 | Msa1266810:intron | 50.0% | |
| CCTTTGGTCTACACCAGTGA+TGG | + | chr8_2:71840774-71840793 | None:intergenic | 50.0% | |
| CCATCACTGGTGTAGACCAA+AGG | - | chr8_2:71840771-71840790 | Msa1266810:CDS | 50.0% | |
| GTAAATCTCAAGGCTGTCCC+TGG | - | chr8_2:71840900-71840919 | Msa1266810:CDS | 50.0% | |
| GAAGGATCTGCTGTCAAAGC+TGG | - | chr8_2:71840995-71841014 | Msa1266810:CDS | 50.0% | |
| GTATCGAGCGACTAGAGGTT+GGG | - | chr8_2:71841018-71841037 | Msa1266810:CDS | 50.0% | |
| GACGACATAAAGCGCGAGTA+TGG | - | chr8_2:71841103-71841122 | Msa1266810:CDS | 50.0% | |
| TTGGCTGCAACTTCTGTCGA+TGG | - | chr8_2:71841406-71841425 | Msa1266810:CDS | 50.0% | |
| GGTGACGTAAACAATAGCCG+TGG | + | chr8_2:71841609-71841628 | None:intergenic | 50.0% | |
| TCATGAGGCCAGACGTTTCA+TGG | - | chr8_2:71841669-71841688 | Msa1266810:CDS | 50.0% | |
| ! | TGCTGCTTACGCATCCAAAC+CGG | - | chr8_2:71841708-71841727 | Msa1266810:CDS | 50.0% |
| TACAAAGTGAGCCAGAGCAC+TGG | - | chr8_2:71841794-71841813 | Msa1266810:CDS | 50.0% | |
| AATGCATTGGACCAGTGCTC+TGG | + | chr8_2:71841808-71841827 | None:intergenic | 50.0% | |
| CAATAGCATGGCAGCAAGGA+AGG | + | chr8_2:71842167-71842186 | None:intergenic | 50.0% | |
| ACAGCAATAGCATGGCAGCA+AGG | + | chr8_2:71842171-71842190 | None:intergenic | 50.0% | |
| ! | ATAGCCGATTCAACCTGGAC+TGG | + | chr8_2:71842306-71842325 | None:intergenic | 50.0% |
| ! | AGTCCAGGTTGAATCGGCTA+TGG | - | chr8_2:71842305-71842324 | Msa1266810:CDS | 50.0% |
| ! | CTTCCATAGCCGATTCAACC+TGG | + | chr8_2:71842311-71842330 | None:intergenic | 50.0% |
| !! | TTTGATTTTGGCCGACCAGG+AGG | + | chr8_2:71842366-71842385 | None:intergenic | 50.0% |
| !! | TGCTTTGATTTTGGCCGACC+AGG | + | chr8_2:71842369-71842388 | None:intergenic | 50.0% |
| TGGTCGGCCAAAATCAAAGC+AGG | - | chr8_2:71842368-71842387 | Msa1266810:CDS | 50.0% | |
| TGCGGTAAATGCAAGGGACT+TGG | - | chr8_2:71842426-71842445 | Msa1266810:CDS | 50.0% | |
| GTTTGCACGTCTTCCGATTG+TGG | + | chr8_2:71842452-71842471 | None:intergenic | 50.0% | |
| ! | TGCCCTTAGGGCACTAGTTA+AGG | + | chr8_2:71842774-71842793 | None:intergenic | 50.0% |
| ! | AACTAGTGCCCTAAGGGCAT+TGG | - | chr8_2:71842775-71842794 | Msa1266810:intron | 50.0% |
| TCTCAGACTCTCCTCCATTC+CGG | + | chr8_2:71843254-71843273 | None:intergenic | 50.0% | |
| ATGGCAGGTACAACGGCTAA+TGG | + | chr8_2:71843841-71843860 | None:intergenic | 50.0% | |
| CGAAGACATGGCAGGTACAA+CGG | + | chr8_2:71843848-71843867 | None:intergenic | 50.0% | |
| TACATCTGGTGCCTCCAACT+AGG | + | chr8_2:71844407-71844426 | None:intergenic | 50.0% | |
| TCAAAGAGCGGCACAGCAGT+GGG | - | chr8_2:71840742-71840761 | Msa1266810:CDS | 55.0% | |
| ! | GGTATCGAGCGACTAGAGGT+TGG | - | chr8_2:71841017-71841036 | Msa1266810:CDS | 55.0% |
| AAGGAAAAGGAGAGGGCGAC+AGG | + | chr8_2:71841347-71841366 | None:intergenic | 55.0% | |
| ATCAGACGCTCGCTCACTAC+AGG | - | chr8_2:71842038-71842057 | Msa1266810:CDS | 55.0% | |
| GGGATTGTAGCTGCAAGGGA+TGG | - | chr8_2:71842130-71842149 | Msa1266810:CDS | 55.0% | |
| !! | AGGACGCTTAGTTGGTGGAG+GGG | + | chr8_2:71842346-71842365 | None:intergenic | 55.0% |
| !! | GAGGACGCTTAGTTGGTGGA+GGG | + | chr8_2:71842347-71842366 | None:intergenic | 55.0% |
| CAACTAAGCGTCCTCCTGGT+CGG | - | chr8_2:71842352-71842371 | Msa1266810:CDS | 55.0% | |
| GCAAGGGACTTGGCCACAAT+CGG | - | chr8_2:71842436-71842455 | Msa1266810:CDS | 55.0% | |
| TAACTACGCACCAGCCCAGT+CGG | - | chr8_2:71843676-71843695 | Msa1266810:CDS | 55.0% | |
| ! | ATCACTGTCAGCCACCGACT+GGG | + | chr8_2:71843693-71843712 | None:intergenic | 55.0% |
| TATCACTGTCAGCCACCGAC+TGG | + | chr8_2:71843694-71843713 | None:intergenic | 55.0% | |
| ! | GAAGGCGTGTCTAGTGTACG+AGG | + | chr8_2:71843719-71843738 | None:intergenic | 55.0% |
| GTCAAAGAGCGGCACAGCAG+TGG | - | chr8_2:71840741-71840760 | Msa1266810:CDS | 60.0% | |
| !! | GCTGGGTATCGAGCGACTAG+AGG | - | chr8_2:71841013-71841032 | Msa1266810:CDS | 60.0% |
| TCGAGCGACTAGAGGTTGGG+TGG | - | chr8_2:71841021-71841040 | Msa1266810:CDS | 60.0% | |
| CGAGCGACTAGAGGTTGGGT+GGG | - | chr8_2:71841022-71841041 | Msa1266810:CDS | 60.0% | |
| !! | GGAGGACGCTTAGTTGGTGG+AGG | + | chr8_2:71842348-71842367 | None:intergenic | 60.0% |
| CCAGGAGGACGCTTAGTTGG+TGG | + | chr8_2:71842351-71842370 | None:intergenic | 60.0% | |
| CCACCAACTAAGCGTCCTCC+TGG | - | chr8_2:71842348-71842367 | Msa1266810:CDS | 60.0% | |
| CGACCAGGAGGACGCTTAGT+TGG | + | chr8_2:71842354-71842373 | None:intergenic | 60.0% | |
| GGAGAGGGCGACAGGCTTGC+CGG | + | chr8_2:71841339-71841358 | None:intergenic | 70.0% | |
| CTACGCACCAGCCCAGTCGG+TGG | - | chr8_2:71843679-71843698 | Msa1266810:CDS | 70.0% | |
| ! | CTGTCAGCCACCGACTGGGC+TGG | + | chr8_2:71843689-71843708 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 71838572 | 71844513 | 71838572 | ID=Msa1266810;Name=Msa1266810 |
| chr8_2 | mRNA | 71838572 | 71844513 | 71838572 | ID=Msa1266810-mRNA-1;Parent=Msa1266810;Name=Msa1266810-mRNA-1;_AED=0.01;_eAED=0.01;_QI=116|1|1|1|0.33|0.25|4|456|750 |
| chr8_2 | exon | 71838572 | 71839015 | 71838572 | ID=Msa1266810-mRNA-1:exon:24113;Parent=Msa1266810-mRNA-1 |
| chr8_2 | exon | 71840594 | 71842502 | 71840594 | ID=Msa1266810-mRNA-1:exon:24112;Parent=Msa1266810-mRNA-1 |
| chr8_2 | exon | 71843660 | 71844018 | 71843660 | ID=Msa1266810-mRNA-1:exon:24111;Parent=Msa1266810-mRNA-1 |
| chr8_2 | exon | 71844401 | 71844513 | 71844401 | ID=Msa1266810-mRNA-1:exon:24110;Parent=Msa1266810-mRNA-1 |
| chr8_2 | five_prime_UTR | 71844401 | 71844513 | 71844401 | ID=Msa1266810-mRNA-1:five_prime_utr;Parent=Msa1266810-mRNA-1 |
| chr8_2 | five_prime_UTR | 71844016 | 71844018 | 71844016 | ID=Msa1266810-mRNA-1:five_prime_utr;Parent=Msa1266810-mRNA-1 |
| chr8_2 | CDS | 71843660 | 71844015 | 71843660 | ID=Msa1266810-mRNA-1:cds;Parent=Msa1266810-mRNA-1 |
| chr8_2 | CDS | 71840606 | 71842502 | 71840606 | ID=Msa1266810-mRNA-1:cds;Parent=Msa1266810-mRNA-1 |
| chr8_2 | three_prime_UTR | 71840594 | 71840605 | 71840594 | ID=Msa1266810-mRNA-1:three_prime_utr;Parent=Msa1266810-mRNA-1 |
| chr8_2 | three_prime_UTR | 71838572 | 71839015 | 71838572 | ID=Msa1266810-mRNA-1:three_prime_utr;Parent=Msa1266810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
