AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1416440

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1416440 MtrunA17_Chr1g0193691 98.318 892 15 0 1 892 1 892 0.0 1825
Msa1416440 MtrunA17_Chr4g0054811 58.769 325 119 4 573 892 462 776 2.30e-114 367
Msa1416440 MtrunA17_Chr4g0054811 38.636 396 135 17 1 358 1 326 8.77e-53 197
Msa1416440 MtrunA17_Chr4g0031521 52.522 337 133 4 555 890 392 702 5.27e-109 351
Msa1416440 MtrunA17_Chr4g0031521 38.108 370 157 11 1 347 1 321 1.43e-56 207
Msa1416440 MtrunA17_Chr7g0238501 45.902 305 104 3 586 890 310 553 2.89e-79 267
Msa1416440 MtrunA17_Chr7g0238501 26.394 269 158 7 98 355 66 305 9.07e-17 84.7
Msa1416440 MtrunA17_Chr4g0039061 45.902 305 106 5 587 891 245 490 2.30e-74 252
Msa1416440 MtrunA17_Chr4g0039061 45.238 84 44 1 286 367 175 258 6.48e-18 87.8
Msa1416440 MtrunA17_Chr4g0067301 35.932 295 138 2 589 883 244 487 4.39e-56 201
Msa1416440 MtrunA17_Chr4g0067301 54.098 61 28 0 289 349 140 200 2.91e-12 70.1
Msa1416440 MtrunA17_Chr2g0295991 47.674 172 90 0 712 883 305 476 1.04e-47 177
Msa1416440 MtrunA17_Chr2g0295991 50.746 67 33 0 289 355 142 208 2.01e-13 73.9
Msa1416440 MtrunA17_Chr1g0213351 28.188 298 149 5 592 884 118 355 5.99e-33 131
Msa1416440 MtrunA17_Chr1g0207571 29.412 306 153 5 592 892 99 346 1.42e-31 127
Msa1416440 MtrunA17_Chr7g0263281 28.904 301 149 5 592 887 109 349 1.38e-29 121
Msa1416440 MtrunA17_Chr1g0181901 26.970 330 147 6 592 887 114 383 2.42e-29 121
Msa1416440 MtrunA17_Chr7g0250061 35.393 178 106 3 715 887 181 354 1.50e-26 112
Msa1416440 MtrunA17_Chr8g0371321 35.393 178 106 3 715 887 184 357 6.63e-26 111
Msa1416440 MtrunA17_Chr1g0211251 38.202 178 101 3 715 887 186 359 7.53e-26 110
Msa1416440 MtrunA17_Chr3g0089691 33.005 203 116 6 696 884 65 261 1.25e-22 99.8
Msa1416440 MtrunA17_Chr7g0223641 39.231 130 71 2 762 883 67 196 2.19e-22 96.3
Msa1416440 MtrunA17_Chr3g0089711 33.005 203 116 6 696 884 151 347 4.89e-22 99.0
Msa1416440 MtrunA17_Chr3g0089721 33.005 203 116 6 696 884 151 347 9.00e-22 98.2
Msa1416440 MtrunA17_Chr1g0175381 31.461 178 113 3 712 884 180 353 1.04e-21 98.6
Msa1416440 MtrunA17_Chr2g0294291 33.333 174 107 3 715 883 181 350 2.73e-21 97.1
Msa1416440 MtrunA17_Chr7g0256751 31.500 200 117 6 696 881 152 345 1.69e-17 86.3
Msa1416440 MtrunA17_Chr7g0256771 32.374 139 86 3 696 826 153 291 1.59e-13 72.8
Msa1416440 MtrunA17_Chr4g0063051 28.652 178 98 5 713 888 163 313 8.28e-13 70.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1416440 AT2G46920.3 62.959 899 271 16 1 892 1 844 0.0 1081
Msa1416440 AT2G46920.1 62.959 899 271 16 1 892 1 844 0.0 1081
Msa1416440 AT2G46920.2 62.959 899 271 16 1 892 1 844 0.0 1081
Msa1416440 AT2G46920.4 62.959 899 271 16 1 892 1 844 0.0 1081
Msa1416440 AT1G07630.1 53.824 340 126 6 555 890 348 660 3.73e-114 364
Msa1416440 AT1G07630.1 39.730 370 145 13 1 347 1 315 1.91e-62 224
Msa1416440 AT2G35350.1 50.131 383 168 8 517 892 414 780 9.17e-109 353
Msa1416440 AT2G35350.1 38.227 361 129 14 25 354 37 334 6.76e-47 180
Msa1416440 AT2G28890.1 55.960 302 110 3 589 890 374 652 8.76e-108 347
Msa1416440 AT2G28890.1 42.033 364 139 13 1 347 1 309 8.13e-64 228
Msa1416440 AT5G02400.1 55.844 308 110 5 584 891 392 673 7.13e-106 342
Msa1416440 AT5G02400.1 36.628 344 132 11 31 349 31 313 1.33e-47 181
Msa1416440 AT3G09400.1 56.209 306 101 5 586 891 377 649 5.69e-105 339
Msa1416440 AT3G09400.1 33.060 366 163 12 1 346 1 304 9.49e-39 154
Msa1416440 AT3G09400.2 52.222 270 96 5 586 855 377 613 4.45e-79 270
Msa1416440 AT3G09400.2 33.060 366 163 12 1 346 1 304 6.88e-39 154
Msa1416440 AT3G16560.1 43.023 172 98 0 712 883 309 480 3.11e-45 171
Msa1416440 AT3G16560.4 43.023 172 98 0 712 883 309 480 3.11e-45 171
Msa1416440 AT3G16560.2 43.023 172 98 0 712 883 309 480 3.11e-45 171
Msa1416440 AT3G16560.3 41.667 144 84 0 712 855 309 452 1.54e-33 135
Msa1416440 AT4G38520.2 29.831 295 142 5 592 881 119 353 8.57e-33 132
Msa1416440 AT4G38520.1 29.831 295 142 5 592 881 119 353 8.57e-33 132
Msa1416440 AT3G12620.2 28.165 316 161 6 577 887 107 361 6.24e-31 126
Msa1416440 AT3G12620.1 28.165 316 161 6 577 887 107 361 6.24e-31 126
Msa1416440 AT5G06750.2 26.578 301 159 4 592 887 38 281 8.86e-29 118
Msa1416440 AT5G06750.3 26.578 301 159 4 592 887 120 363 3.36e-28 118
Msa1416440 AT5G06750.1 26.578 301 159 4 592 887 120 363 3.36e-28 118
Msa1416440 AT3G55050.1 37.288 177 102 3 712 883 186 358 1.09e-27 116
Msa1416440 AT3G55050.2 37.288 177 102 3 712 883 186 358 1.09e-27 116
Msa1416440 AT3G51370.2 35.429 175 104 3 715 884 99 269 6.58e-27 112
Msa1416440 AT5G66080.2 37.079 178 103 3 712 884 80 253 1.31e-26 110
Msa1416440 AT3G17090.1 36.364 176 103 3 713 883 187 358 3.72e-26 112
Msa1416440 AT3G51370.1 35.429 175 104 3 715 884 184 354 5.38e-26 111
Msa1416440 AT3G51370.3 35.429 175 104 3 715 884 184 354 5.38e-26 111
Msa1416440 AT5G66080.1 37.079 178 103 3 712 884 184 357 1.34e-25 110
Msa1416440 AT5G02760.1 39.205 176 98 3 713 883 173 344 5.12e-24 105
Msa1416440 AT4G33920.3 34.286 175 106 3 715 884 56 226 3.78e-23 100
Msa1416440 AT4G33920.2 34.286 175 106 3 715 884 86 256 7.04e-23 100
Msa1416440 AT4G33920.1 34.286 175 106 3 715 884 169 339 2.98e-22 100
Msa1416440 AT3G17090.2 37.069 116 68 2 713 823 187 302 2.87e-17 84.3

Find 273 sgRNAs with CRISPR-Local

Find 526 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTAAGAGCTTTCTTATTTA+TGG 0.115163 tig0024351:+36929 None:intergenic
TCTCTTTCTTTCTTCTTTCT+TGG 0.148286 tig0024351:+43821 None:intergenic
TTTCAGGGACTTCGGGTTTA+AGG 0.173499 tig0024351:+42098 None:intergenic
ATCAAGACAATATGCAAATA+TGG 0.178352 tig0024351:+37063 None:intergenic
CTTCTTCATTGCTGAAATAT+TGG 0.212752 tig0024351:+39015 None:intergenic
CATGTTTGCTGGTGATTTCT+TGG 0.218670 tig0024351:-42794 Msa1416440:CDS
AAATCCAGAACTTGCTATAA+TGG 0.219054 tig0024351:-41321 Msa1416440:CDS
ACTACGTTTAAGACGATTTC+AGG 0.226435 tig0024351:-42874 Msa1416440:CDS
CAGCCAGTTCCACGCGGTTC+TGG 0.228026 tig0024351:-42721 Msa1416440:CDS
AATAATAATAATGGGAGATT+TGG 0.232381 tig0024351:+43745 None:intergenic
GATTGATCCTTGATTAATTC+AGG 0.235778 tig0024351:+41980 None:intergenic
GAACAAGGGTGGTTGTTTAT+TGG 0.236233 tig0024351:-42241 Msa1416440:CDS
GGGAGATAGTCGTGTGATTT+TGG 0.243703 tig0024351:-41243 Msa1416440:CDS
GATTTCTAAAATCAATTTAC+TGG 0.245549 tig0024351:+37023 None:intergenic
GAGTAATAATGGGGTGGTTA+TGG 0.255294 tig0024351:-43276 Msa1416440:five_prime_UTR
GAAAAGGTAAAAGAAGTTTA+AGG 0.257265 tig0024351:-41835 Msa1416440:CDS
ATCTGTCATGGTCGTTTCTT+TGG 0.260064 tig0024351:-37179 Msa1416440:CDS
AACAAGGGTGGTTGTTTATT+GGG 0.261849 tig0024351:-42240 Msa1416440:CDS
CTCTTTCTTTCTTCTTTCTT+GGG 0.265047 tig0024351:+43822 None:intergenic
GGGTAAATTCAAAACAAATT+AGG 0.279468 tig0024351:+36951 None:intergenic
CATGGTCAAGTGAGTAATAA+TGG 0.297271 tig0024351:-43287 Msa1416440:five_prime_UTR
ATCGTCTTAAACGTAGTTTC+AGG 0.297907 tig0024351:+42880 None:intergenic
ATGGAGCATTCTAATTCTTC+TGG 0.301105 tig0024351:-42928 Msa1416440:CDS
AGTAATAATGGGGTGGTTAT+GGG 0.306325 tig0024351:-43275 Msa1416440:five_prime_UTR
TTCTTCAAGTGACCGATTCT+TGG 0.307365 tig0024351:-39060 Msa1416440:CDS
GGGGTGGTTATGGGGTTTGA+TGG 0.308122 tig0024351:-43266 Msa1416440:five_prime_UTR
AATCCAGAACTTGCTATAAT+GGG 0.309261 tig0024351:-41320 Msa1416440:CDS
TTAACAGAGAAGCACTTAAA+AGG 0.310457 tig0024351:+37103 None:intergenic
TTAAGAGCTTTCTTATTTAT+GGG 0.310990 tig0024351:+36930 None:intergenic
AGAAGTGGTGGTTTCATGTC+TGG 0.317726 tig0024351:-42637 Msa1416440:CDS
TTAAAAGTTACCAGAGCATT+TGG 0.331448 tig0024351:-40238 Msa1416440:CDS
AGCTACTTCAAATGGAATCT+TGG 0.332616 tig0024351:-41805 Msa1416440:CDS
TATTGTGCAGGATCGCCTTC+TGG 0.333824 tig0024351:+38957 None:intergenic
ATTAAACAATAACCTTGAAA+TGG 0.336830 tig0024351:-43514 Msa1416440:five_prime_UTR
TCTTGATATTGAAACAATCT+TGG 0.339496 tig0024351:-37047 Msa1416440:three_prime_UTR
CGCGGTTCTGGACCTTTGAA+TGG 0.340155 tig0024351:-42709 Msa1416440:CDS
TTTCTTTGGAGGGAAGGATT+TGG 0.340333 tig0024351:-37165 Msa1416440:CDS
TTTCACTCGATCATTCAATA+TGG 0.340343 tig0024351:+40267 None:intergenic
AGGTTATTGTTTAATTTGAT+TGG 0.342556 tig0024351:+43522 None:intergenic
AGATGTTTATGTCATGAATC+TGG 0.343955 tig0024351:-41264 Msa1416440:CDS
GAGCCATTAGATGAAGGTTT+AGG 0.346607 tig0024351:-43084 Msa1416440:CDS
GACCCCATTATAGCAAGTTC+TGG 0.349623 tig0024351:+41317 None:intergenic
TCCTTTGATCTGACCCTTTG+AGG 0.354335 tig0024351:-43410 Msa1416440:five_prime_UTR
AGGGAAAGGCCGGTGAAGAT+AGG 0.358505 tig0024351:-42285 Msa1416440:CDS
GAAAATGGAAGCACTGGGTT+TGG 0.360276 tig0024351:-41656 Msa1416440:CDS
TCAAGACAATATGCAAATAT+GGG 0.366055 tig0024351:+37064 None:intergenic
TTCAGGGACTTCGGGTTTAA+GGG 0.372236 tig0024351:+42099 None:intergenic
CCGTCTACATCAGGGGAAAA+TGG 0.373824 tig0024351:-41671 Msa1416440:CDS
TCTTTCCTTGGAGTTATGAT+TGG 0.374905 tig0024351:-41508 Msa1416440:CDS
ATTTCCGACCGACTGGATTC+TGG 0.375849 tig0024351:+42055 None:intergenic
TTTAAAGTTTCAGGGACTTC+GGG 0.377366 tig0024351:+42091 None:intergenic
TTTGTATTTGTATTTGTTGA+GGG 0.384181 tig0024351:-43219 Msa1416440:five_prime_UTR
TAGATTTCTAGACAAAGAAT+TGG 0.384327 tig0024351:-42161 Msa1416440:CDS
AACAGCTTCGTGCTCCTTGT+TGG 0.386048 tig0024351:+41628 None:intergenic
GTGTTTCAAGTTAAATATAT+CGG 0.387374 tig0024351:-39131 Msa1416440:CDS
GAACCTGCTGCTTCGTTTGA+GGG 0.388487 tig0024351:-42772 Msa1416440:CDS
TACTTCCACAATTAGATAAC+TGG 0.389161 tig0024351:+41903 None:intergenic
GGTCCAGAACCGCGTGGAAC+TGG 0.389417 tig0024351:+42718 None:intergenic
TTCTTCTGGTTTACACAAGC+AGG 0.391131 tig0024351:-42914 Msa1416440:CDS
AAACCTTGAGTGGTTCGTTT+AGG 0.394527 tig0024351:-42960 Msa1416440:CDS
TCCTTGACAGAGCTTGAATT+AGG 0.400913 tig0024351:+41194 None:intergenic
AGAAGAGAAGCTCTGCAATA+AGG 0.401305 tig0024351:+38934 None:intergenic
GGAACCTGCTGCTTCGTTTG+AGG 0.404499 tig0024351:-42773 Msa1416440:CDS
CATGAAAAGTTGACTGGAAA+AGG 0.406487 tig0024351:-41851 Msa1416440:CDS
TTGGAGAGAGGCTTTGCCTC+AGG 0.406640 tig0024351:-42670 Msa1416440:CDS
GCATAATCTGCAGTGGGCTC+AGG 0.409987 tig0024351:-42305 Msa1416440:CDS
AACGGCACTTCTCGTGTTGT+TGG 0.410651 tig0024351:-43156 Msa1416440:CDS
GGCCATGCCAACTGAGTAAC+CGG 0.412628 tig0024351:+42412 None:intergenic
TGTCCTAAACCTTCATCTAA+TGG 0.414208 tig0024351:+43081 None:intergenic
AAGAATTGGAAGGTTTACTT+TGG 0.414277 tig0024351:-42147 Msa1416440:CDS
GCAAAGGTTGTTCTTTCAAC+CGG 0.415006 tig0024351:-42431 Msa1416440:CDS
TCTTGATAACATGATTGTTA+TGG 0.415311 tig0024351:+41087 None:intergenic
CGGCCTACACTTAGTATCTC+TGG 0.415577 tig0024351:+42387 None:intergenic
GCTTTATGAGCTACTTCAAA+TGG 0.418404 tig0024351:-41813 Msa1416440:CDS
TGATTGTTATGGTTGTGAAT+TGG 0.419136 tig0024351:+41098 None:intergenic
GATGAAGGCCCGTCTACATC+AGG 0.424284 tig0024351:-41680 Msa1416440:CDS
GGGTGGTTATGGGGTTTGAT+GGG 0.424314 tig0024351:-43265 Msa1416440:five_prime_UTR
CTTGATATTGAAACAATCTT+GGG 0.428125 tig0024351:-37046 Msa1416440:three_prime_UTR
TTAAACAATAACCTTGAAAT+GGG 0.428739 tig0024351:-43513 Msa1416440:five_prime_UTR
AGAATTGGAAGGTTTACTTT+GGG 0.429016 tig0024351:-42146 Msa1416440:CDS
AAAACACTCTTTACCTCAAA+GGG 0.430978 tig0024351:+43397 None:intergenic
CAATGAGATAGTTGAGGAAA+AGG 0.433095 tig0024351:-41951 Msa1416440:CDS
TGTGTAAGAAACTCTTTCCT+TGG 0.434759 tig0024351:-41520 Msa1416440:CDS
CCTATTAGAAAATGCAGGTC+TGG 0.442699 tig0024351:-41437 Msa1416440:CDS
TTCGTTTAGGCATGATAGTA+TGG 0.443765 tig0024351:-42947 Msa1416440:CDS
CGCAAGTGGTGCCGAAAAGT+TGG 0.445340 tig0024351:+42564 None:intergenic
GCTACTTCAAATGGAATCTT+GGG 0.449531 tig0024351:-41804 Msa1416440:CDS
TTCTTGGTACTCTCCTCTGA+TGG 0.453141 tig0024351:-39044 Msa1416440:CDS
AATATGGCCTGACTATCATC+AGG 0.454667 tig0024351:+40283 None:intergenic
TGTCATGGTCGTTTCTTTGG+AGG 0.454997 tig0024351:-37176 Msa1416440:CDS
TTGTTTAATTTGATTGGTGA+TGG 0.456228 tig0024351:+43528 None:intergenic
GGAAACGGCGGAGAATAATC+TGG 0.457804 tig0024351:-41348 Msa1416440:CDS
AACCAGAGTGCCATGTTTGC+TGG 0.458335 tig0024351:-42805 Msa1416440:CDS
AAACACAAGGGCAGCAGTAA+AGG 0.460107 tig0024351:+36898 None:intergenic
AGGCTTTGCCTCAGGTCCAT+TGG 0.460532 tig0024351:-42662 Msa1416440:CDS
CATCTCATGAGAAGTGTTAG+TGG 0.460965 tig0024351:-42514 Msa1416440:CDS
TTCTGGTCCTGAATTAATCA+AGG 0.463926 tig0024351:-41987 Msa1416440:CDS
ATCAGACATTTCCGACCGAC+TGG 0.465386 tig0024351:+42048 None:intergenic
TTACCAGAGCATTTGGCGCC+GGG 0.466068 tig0024351:-40231 Msa1416440:CDS
CGAGAAAACGTGTTCTTCAC+CGG 0.469877 tig0024351:+42490 None:intergenic
GTTCAACATGAAAAGTTGAC+TGG 0.470671 tig0024351:-41857 Msa1416440:CDS
CTTGGAGTTATGATTGGCAT+AGG 0.472134 tig0024351:-41502 Msa1416440:CDS
TGCCCATGTCACATGGTTCA+TGG 0.473613 tig0024351:-38988 Msa1416440:CDS
GTTTATGTCTCAATGATTCA+AGG 0.473669 tig0024351:-43581 Msa1416440:five_prime_UTR
GGAACATACCTCTTCAATAC+TGG 0.475850 tig0024351:+40992 None:intergenic
ACAAGTAGGTTGAAGGGGAC+AGG 0.476334 tig0024351:+43604 None:intergenic
CTACGTTTAAGACGATTTCA+GGG 0.478288 tig0024351:-42873 Msa1416440:CDS
TCAGGGGAAAATGGAAGCAC+TGG 0.478893 tig0024351:-41662 Msa1416440:CDS
AGAACACCCTGATGATAGTC+AGG 0.480584 tig0024351:-40290 Msa1416440:CDS
GTTTGTATTTGTATTTGTTG+AGG 0.480678 tig0024351:-43220 Msa1416440:five_prime_UTR
TTGTTTATTGGGATATATGA+CGG 0.481266 tig0024351:-42229 Msa1416440:CDS
AGTTTCTTACACAAGGACTT+TGG 0.483606 tig0024351:+41530 None:intergenic
ATGGTCAAGTGAGTAATAAT+GGG 0.484486 tig0024351:-43286 Msa1416440:five_prime_UTR
TCTTGGTACTCTCCTCTGAT+GGG 0.485583 tig0024351:-39043 Msa1416440:CDS
GAGAAAATATTAGAAGCCTC+TGG 0.488265 tig0024351:-41461 Msa1416440:CDS
AGAAGATGGCTCTAAACATC+AGG 0.492537 tig0024351:-41702 Msa1416440:CDS
TCGTCTTAAACGTAGTTTCA+GGG 0.494913 tig0024351:+42881 None:intergenic
GTACAGAAGGAGTGCAACTT+AGG 0.495852 tig0024351:+39096 None:intergenic
CATAAACACAAGTAGGTTGA+AGG 0.496059 tig0024351:+43597 None:intergenic
CCGCGTGGAACTGGCTGCAA+AGG 0.496825 tig0024351:+42727 None:intergenic
GGAAGGATTTGGAGATCATC+GGG 0.497013 tig0024351:-37154 Msa1416440:CDS
TTTAATTTGATTGGTGATGG+TGG 0.497367 tig0024351:+43531 None:intergenic
AAGAACAGAAGAGGCATACA+TGG 0.499922 tig0024351:-41369 Msa1416440:CDS
CTTTCAACCGGTTACTCAGT+TGG 0.503085 tig0024351:-42419 Msa1416440:CDS
GTCATGGTCGTTTCTTTGGA+GGG 0.503413 tig0024351:-37175 Msa1416440:CDS
GAAGTGGTGGTTTCATGTCT+GGG 0.504538 tig0024351:-42636 Msa1416440:CDS
ATGTCTGGTCCTTTGGAGAG+AGG 0.507990 tig0024351:-42682 Msa1416440:CDS
GAACCCGGCGCCAAATGCTC+TGG 0.508085 tig0024351:+40228 None:intergenic
AACATTCTCTAAGCACTCCA+TGG 0.508300 tig0024351:-42467 Msa1416440:CDS
ATCAAGAGTGCTTGAATCAA+CGG 0.509625 tig0024351:+42987 None:intergenic
GATGTTTATGTCATGAATCT+GGG 0.511586 tig0024351:-41263 Msa1416440:CDS
GTTACCAGAGCATTTGGCGC+CGG 0.513331 tig0024351:-40232 Msa1416440:CDS
TGGTCGTTTCTTTGGAGGGA+AGG 0.514079 tig0024351:-37171 Msa1416440:CDS
GTAATAATGGGGTGGTTATG+GGG 0.514967 tig0024351:-43274 Msa1416440:five_prime_UTR
AGCACTCCATGGGTGGAAGT+TGG 0.516622 tig0024351:-42456 Msa1416440:CDS
TGTCTAGAAATCTATAAAGA+TGG 0.517327 tig0024351:+42170 None:intergenic
TCGTCTACTGTAAGAGAAGA+TGG 0.519430 tig0024351:-41716 Msa1416440:CDS
TCGGGTTTAAGGGAATCTAC+AGG 0.519852 tig0024351:+42109 None:intergenic
GCAGGAGATTCAAACATAGT+TGG 0.520083 tig0024351:+43039 None:intergenic
AGTGTAGGCCGGACATCTCT+AGG 0.520773 tig0024351:-42375 Msa1416440:CDS
TTCTGCCTTGATACAGAAGC+AGG 0.522225 tig0024351:+41602 None:intergenic
TTGATATTCCTCATGGAGAT+CGG 0.526663 tig0024351:-37222 Msa1416440:CDS
TGGCGCCGGGTTCTTGAAGA+GGG 0.527058 tig0024351:-40218 Msa1416440:intron
TCAAAACAAATTAGGACTGG+TGG 0.527155 tig0024351:+36959 None:intergenic
GGGAAAGGCCGGTGAAGATA+GGG 0.528809 tig0024351:-42284 Msa1416440:CDS
GGTTGTTTAGTGCCATTCAA+TGG 0.531093 tig0024351:-43135 Msa1416440:CDS
CAGTGGGCTCAGGGAAAGGC+CGG 0.533471 tig0024351:-42295 Msa1416440:CDS
CTTGATTCTGAAACCTTGAG+TGG 0.534406 tig0024351:-42970 Msa1416440:CDS
ACCGTCCCGTGTCCTTTGAT+AGG 0.537516 tig0024351:-43799 Msa1416440:five_prime_UTR
TCTGCAGTGGGCTCAGGGAA+AGG 0.538895 tig0024351:-42299 Msa1416440:CDS
TTGGCGCCGGGTTCTTGAAG+AGG 0.539302 tig0024351:-40219 Msa1416440:CDS
TAGAGAGTCATTAGTACGCA+TGG 0.542192 tig0024351:-41147 Msa1416440:CDS
CAGAGGAGAGTACCAAGAAT+CGG 0.545943 tig0024351:+39048 None:intergenic
GGCTCTAAACATCAGGATGA+AGG 0.546035 tig0024351:-41695 Msa1416440:CDS
CCACAGTTCCTAGAGATGTC+CGG 0.547445 tig0024351:+42367 None:intergenic
GGGAAGGATTTGGAGATCAT+CGG 0.548516 tig0024351:-37155 Msa1416440:CDS
CATGTCTGGGCCGATAGAGA+AGG 0.548519 tig0024351:-42623 Msa1416440:CDS
GAATTCGATGGACTAATAGC+AGG 0.549082 tig0024351:+43021 None:intergenic
ACCTCAAAGGGTCAGATCAA+AGG 0.549244 tig0024351:+43409 None:intergenic
ATGTCTGGGCCGATAGAGAA+GGG 0.549805 tig0024351:-42622 Msa1416440:CDS
TCCTAATTCAAGCTCTGTCA+AGG 0.550425 tig0024351:-41195 Msa1416440:CDS
TTTCCATGAACCATGTGACA+TGG 0.550559 tig0024351:+38985 None:intergenic
CAAGAAATCACCAGCAAACA+TGG 0.551763 tig0024351:+42795 None:intergenic
GAACAAAGATTGAGACAAAG+AGG 0.551861 tig0024351:+43653 None:intergenic
GAACTGCTTGATATTCCTCA+TGG 0.552205 tig0024351:-37229 Msa1416440:CDS
TCTTCTGGTTTACACAAGCA+GGG 0.552435 tig0024351:-42913 Msa1416440:CDS
AACCGGTTACTCAGTTGGCA+TGG 0.552985 tig0024351:-42414 Msa1416440:CDS
CTCCTACGACCACGCGCAAG+TGG 0.552988 tig0024351:+42550 None:intergenic
AATGTTTCCACAGCAAGGAC+AGG 0.553085 tig0024351:-42835 Msa1416440:CDS
TACATGAACCCTATCTTCAC+CGG 0.553678 tig0024351:+42276 None:intergenic
CATAATCTGCAGTGGGCTCA+GGG 0.555002 tig0024351:-42304 Msa1416440:CDS
TAAGAGCTTTCTTATTTATG+GGG 0.555187 tig0024351:+36931 None:intergenic
TTTCTAGACAAAGAATTGGA+AGG 0.556075 tig0024351:-42157 Msa1416440:CDS
TTGGAGTTATGATTGGCATA+GGG 0.556902 tig0024351:-41501 Msa1416440:CDS
GAACACCAGTTATCTAATTG+TGG 0.557159 tig0024351:-41908 Msa1416440:CDS
TGACAGAGCTTGAATTAGGA+TGG 0.557579 tig0024351:+41198 None:intergenic
TGTCCTTGCTGTGGAAACAT+TGG 0.558283 tig0024351:+42837 None:intergenic
ATTGAGACATAAACACAAGT+AGG 0.558791 tig0024351:+43590 None:intergenic
CATGAGAAGTGTTAGTGGAC+CGG 0.559099 tig0024351:-42509 Msa1416440:CDS
GAAGGAGTGCAACTTAGGTA+AGG 0.559882 tig0024351:+39101 None:intergenic
TGTTTATACTCAGCTTCATA+CGG 0.562140 tig0024351:+42331 None:intergenic
CAAGACAATATGCAAATATG+GGG 0.562381 tig0024351:+37065 None:intergenic
CCTCTTCAATACTGGTGCTG+TGG 0.563096 tig0024351:+41000 None:intergenic
GTTCCCTCAAACGAAGCAGC+AGG 0.565776 tig0024351:+42769 None:intergenic
TTCTCTAAGCACTCCATGGG+TGG 0.568004 tig0024351:-42463 Msa1416440:CDS
TTGCATCCAACTTCCACCCA+TGG 0.569523 tig0024351:+42450 None:intergenic
AATTCAAAACAAATTAGGAC+TGG 0.569768 tig0024351:+36956 None:intergenic
TAATGATTCCTCAGTTCCGA+TGG 0.572372 tig0024351:-41771 Msa1416440:CDS
AGCTCTTGAAAGAACAGAAG+AGG 0.572536 tig0024351:-41378 Msa1416440:CDS
TAGTACGCATGGAGCTCGAT+AGG 0.574316 tig0024351:-41136 Msa1416440:CDS
AGTCGATGGTGAAGTACAGA+AGG 0.575455 tig0024351:+39083 None:intergenic
TTCCATGAACCATGTGACAT+GGG 0.576524 tig0024351:+38986 None:intergenic
ATATTTCAGCAATGAAGAAG+TGG 0.576694 tig0024351:-39012 Msa1416440:CDS
CTGGACCTATTAGAAAATGC+AGG 0.576782 tig0024351:-41442 Msa1416440:CDS
CACCACTTGCGCGTGGTCGT+AGG 0.578737 tig0024351:-42552 Msa1416440:CDS
AGAAGAGGCATACATGGAAA+CGG 0.579428 tig0024351:-41363 Msa1416440:CDS
TCACGATGATGTATCTGTCA+TGG 0.582123 tig0024351:-37191 Msa1416440:CDS
CACTTGCGCGTGGTCGTAGG+AGG 0.582141 tig0024351:-42549 Msa1416440:CDS
CACCAGCAAACATGGCACTC+TGG 0.582390 tig0024351:+42803 None:intergenic
ATAAACACAAGTAGGTTGAA+GGG 0.583940 tig0024351:+43598 None:intergenic
AAACCACCACTTCTATCCAA+TGG 0.584898 tig0024351:+42646 None:intergenic
ATATTGAATGATCGAGTGAA+AGG 0.587589 tig0024351:-40265 Msa1416440:CDS
GTGCCAATGTTTCCACAGCA+AGG 0.588563 tig0024351:-42840 Msa1416440:CDS
ATGCCTAAACGAACCACTCA+AGG 0.588964 tig0024351:+42957 None:intergenic
CAGAGATACTAAGTGTAGGC+CGG 0.591967 tig0024351:-42386 Msa1416440:CDS
ATGAAGGCCCGTCTACATCA+GGG 0.593568 tig0024351:-41679 Msa1416440:CDS
ACCGCCACCTGTCCTTGCTG+TGG 0.597591 tig0024351:+42828 None:intergenic
TCCACAGCAAGGACAGGTGG+CGG 0.597778 tig0024351:-42829 Msa1416440:CDS
CCACAGCACCAGTATTGAAG+AGG 0.599719 tig0024351:-41000 Msa1416440:intron
GAGGCAAAGCCTCTCTCCAA+AGG 0.600093 tig0024351:+42673 None:intergenic
CTATGCCAATCATAACTCCA+AGG 0.602658 tig0024351:+41503 None:intergenic
CAGGGGAAAATGGAAGCACT+GGG 0.604592 tig0024351:-41661 Msa1416440:CDS
TGCTCCAGAATCCAGTCGGT+CGG 0.605509 tig0024351:-42059 Msa1416440:CDS
CAAGTAGGTTGAAGGGGACA+GGG 0.605511 tig0024351:+43605 None:intergenic
ATTTAACAATGAGATAGTTG+AGG 0.605777 tig0024351:-41957 Msa1416440:CDS
TCCTATCAAAGGACACGGGA+CGG 0.605839 tig0024351:+43798 None:intergenic
TCTGCAATAAGGTATTGTGC+AGG 0.607567 tig0024351:+38945 None:intergenic
GATTTATCAGTGTCATCAAG+AGG 0.609649 tig0024351:+42586 None:intergenic
TTCTTTCTGAAGAACAAGGG+TGG 0.610228 tig0024351:-42252 Msa1416440:CDS
AAGTGGTTGCCCATGTCACA+TGG 0.611403 tig0024351:-38995 Msa1416440:CDS
GTAGTTCTTTCTGAAGAACA+AGG 0.612578 tig0024351:-42256 Msa1416440:CDS
AGGAAAGAGTTTCTTACACA+AGG 0.612990 tig0024351:+41523 None:intergenic
GGTCCATTGGATAGAAGTGG+TGG 0.613640 tig0024351:-42649 Msa1416440:CDS
TGGGTTTGGTTCAACCAACA+AGG 0.615592 tig0024351:-41642 Msa1416440:CDS
TGTTCTAGTGATGTTGATGA+AGG 0.616258 tig0024351:-41291 Msa1416440:CDS
GTAAACCTCTCAGAATTCGA+TGG 0.616459 tig0024351:+43009 None:intergenic
CAGCGTTGAGATCCTATCAA+AGG 0.617080 tig0024351:+43787 None:intergenic
TAAACACAAGTAGGTTGAAG+GGG 0.620622 tig0024351:+43599 None:intergenic
ACATTCTCTAAGCACTCCAT+GGG 0.625166 tig0024351:-42466 Msa1416440:CDS
TCAGGTCCATTGGATAGAAG+TGG 0.629020 tig0024351:-42652 Msa1416440:CDS
ATCCAGAACTTGCTATAATG+GGG 0.629741 tig0024351:-41319 Msa1416440:CDS
CTCATGAGATGTTGTAGACG+CGG 0.630558 tig0024351:+42526 None:intergenic
AGTAGAGCTTCGTTAAAAGA+CGG 0.635257 tig0024351:+39158 None:intergenic
CCGACTGGATTCTGGAGCAA+CGG 0.636821 tig0024351:+42063 None:intergenic
TGGGTGGAAGTTGGATGCAA+AGG 0.637203 tig0024351:-42447 Msa1416440:CDS
AACACACGCATAATCTGCAG+TGG 0.639874 tig0024351:-42312 Msa1416440:CDS
GGGAATTTGATGATGATGCA+TGG 0.640341 tig0024351:-43305 Msa1416440:five_prime_UTR
GTTTCCACAGCAAGGACAGG+TGG 0.641159 tig0024351:-42832 Msa1416440:CDS
TATTGACTCCATCGGAACTG+AGG 0.647628 tig0024351:+41763 None:intergenic
TTCATGGAAAATGTTCCAGA+AGG 0.647918 tig0024351:-38972 Msa1416440:CDS
TCTCTTACAGTAGACGAGCA+AGG 0.648174 tig0024351:+41722 None:intergenic
ATTTGCAAAATGATATCTCG+CGG 0.648758 tig0024351:+41054 None:intergenic
GGTCACTTGAAGAAAGTCGA+TGG 0.652423 tig0024351:+39069 None:intergenic
TGAGATCCTATCAAAGGACA+CGG 0.653123 tig0024351:+43793 None:intergenic
TAGTTCTTTCTGAAGAACAA+GGG 0.654250 tig0024351:-42255 Msa1416440:CDS
GTCTGGGCCGATAGAGAAGG+GGG 0.654295 tig0024351:-42620 Msa1416440:CDS
CCAGACATAAAACCATTCAA+AGG 0.654611 tig0024351:+42697 None:intergenic
TCATCTAGTATTGACTCCAT+CGG 0.655797 tig0024351:+41755 None:intergenic
CTACACTTAGTATCTCTGGA+AGG 0.659028 tig0024351:+42391 None:intergenic
CTTCCAGAGATACTAAGTGT+AGG 0.659308 tig0024351:-42390 Msa1416440:CDS
TGTCTGGGCCGATAGAGAAG+GGG 0.661460 tig0024351:-42621 Msa1416440:CDS
CCGTTGCTCCAGAATCCAGT+CGG 0.662617 tig0024351:-42063 Msa1416440:CDS
TACGTTTAAGACGATTTCAG+GGG 0.663223 tig0024351:-42872 Msa1416440:CDS
TTAGTCCATCGAATTCTGAG+AGG 0.663493 tig0024351:-43014 Msa1416440:CDS
GGAGCTCGATAGGATTTCAG+AGG 0.668955 tig0024351:-41126 Msa1416440:CDS
TCAAGTGAGTAATAATGGGG+TGG 0.669097 tig0024351:-43282 Msa1416440:five_prime_UTR
ACTTCTATCCAATGGACCTG+AGG 0.670903 tig0024351:+42654 None:intergenic
TGAAGGCCCGTCTACATCAG+GGG 0.674161 tig0024351:-41678 Msa1416440:CDS
ACACACGCATAATCTGCAGT+GGG 0.674769 tig0024351:-42311 Msa1416440:CDS
CCGGACATCTCTAGGAACTG+TGG 0.684188 tig0024351:-42367 Msa1416440:CDS
ATATTGGTAAAGCCCATCAG+AGG 0.686480 tig0024351:+39031 None:intergenic
AGAGGCATACATGGAAACGG+CGG 0.688502 tig0024351:-41360 Msa1416440:CDS
GCTCTGTCAAGGATGACATG+AGG 0.690355 tig0024351:-41184 Msa1416440:CDS
GAATCTACAGATGAAACACA+AGG 0.690442 tig0024351:+36885 None:intergenic
ATATGGCCTGACTATCATCA+GGG 0.691171 tig0024351:+40284 None:intergenic
AAGACAATATGCAAATATGG+GGG 0.695027 tig0024351:+37066 None:intergenic
ACTGACCCTCTTCAAGAACC+CGG 0.698335 tig0024351:+40213 None:intergenic
GAGATCCTATCAAAGGACAC+GGG 0.711438 tig0024351:+43794 None:intergenic
CCTTTGCAGCCAGTTCCACG+CGG 0.712203 tig0024351:-42727 Msa1416440:CDS
TATTTACGCCGATCTCCATG+AGG 0.738087 tig0024351:+37214 None:intergenic
AATCTACAGATGAAACACAA+GGG 0.746562 tig0024351:+36886 None:intergenic
TGGTCAAGTGAGTAATAATG+GGG 0.749924 tig0024351:-43285 Msa1416440:five_prime_UTR
TTCAAAGGTCCAGAACCGCG+TGG 0.762211 tig0024351:+42712 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATAATAATAATAATAAT+GGG + tig0024351:36986-37005 None:intergenic 0.0%
!! AATAATAATAATAATAATAA+TGG + tig0024351:36987-37006 None:intergenic 0.0%
!! CTATATTTAAAAAGAAAAAA+AGG + tig0024351:37018-37037 None:intergenic 10.0%
!!! AATATTCTATATCTAAAATT+TGG - tig0024351:39823-39842 Msa1416440:intron 10.0%
!!! TTTTTTTATATAATCATCAA+AGG + tig0024351:41026-41045 None:intergenic 10.0%
!!! ATTTTGTGCAATAATAAAAA+TGG - tig0024351:37539-37558 Msa1416440:intron 15.0%
!!! TTTTGTGCAATAATAAAAAT+GGG - tig0024351:37540-37559 Msa1416440:intron 15.0%
!! AATTCAAAAAAGTCATTTAT+CGG - tig0024351:39139-39158 Msa1416440:CDS 15.0%
!! CAAAAATTAAAAAAATGTAC+AGG - tig0024351:39164-39183 Msa1416440:intron 15.0%
!!! ATTTTGCAAATTAAAAATGA+GGG - tig0024351:39678-39697 Msa1416440:intron 15.0%
!! TTATATAAACTATAGACAAA+GGG + tig0024351:40577-40596 None:intergenic 15.0%
!!! TTAAAGATTTTCTTATATCT+AGG + tig0024351:40958-40977 None:intergenic 15.0%
!! TTAGTGATCAAAAAAATAAA+AGG + tig0024351:41051-41070 None:intergenic 15.0%
!! AAAAAAATTAGGGTTAAAAA+AGG + tig0024351:41533-41552 None:intergenic 15.0%
!!! GAGTAAATTTTAATTTTACT+TGG - tig0024351:41890-41909 Msa1416440:CDS 15.0%
!! AAATTATGAAAAACTTGAAA+GGG + tig0024351:41919-41938 None:intergenic 15.0%
!! AAAATTATGAAAAACTTGAA+AGG + tig0024351:41920-41939 None:intergenic 15.0%
!!! TTTCTATTCTAAAATTAAGT+TGG - tig0024351:42042-42061 Msa1416440:CDS 15.0%
!! ACATAATATCAATACTAATA+AGG - tig0024351:43332-43351 Msa1416440:five_prime_UTR 15.0%
!! CATAATATCAATACTAATAA+GGG - tig0024351:43333-43352 Msa1416440:five_prime_UTR 15.0%
!!! AAATATTTAATTTAGGATTG+AGG + tig0024351:43411-43430 None:intergenic 15.0%
!! AATCCTAAATTAAATATTTG+AGG - tig0024351:43412-43431 Msa1416440:five_prime_UTR 15.0%
!!! AAACCTCAAATATTTAATTT+AGG + tig0024351:43418-43437 None:intergenic 15.0%
!! GATGAAAGAAAAAAAAAATA+AGG + tig0024351:43598-43617 None:intergenic 15.0%
!!! AATAATAATAATGGGAGATT+TGG + tig0024351:36978-36997 None:intergenic 20.0%
!!! AGAAAAAAATGTGATGTTTT+TGG + tig0024351:37044-37063 None:intergenic 20.0%
!!! AGGTTATTGTTTAATTTGAT+TGG + tig0024351:37201-37220 None:intergenic 20.0%
!! ATTAAACAATAACCTTGAAA+TGG - tig0024351:37206-37225 Msa1416440:CDS 20.0%
!! TTAAACAATAACCTTGAAAT+GGG - tig0024351:37207-37226 Msa1416440:CDS 20.0%
!! TACTGTTGAAAAATTCATAT+GGG - tig0024351:37366-37385 Msa1416440:intron 20.0%
!!! TTTGTATTTGTATTTGTTGA+GGG - tig0024351:37501-37520 Msa1416440:intron 20.0%
!!! CATTTTGCAAATTAAAAATG+AGG - tig0024351:39677-39696 Msa1416440:intron 20.0%
!!! TGAAGATCTGAAAATTTTTA+TGG - tig0024351:39858-39877 Msa1416440:intron 20.0%
!! CTTATATAAACTATAGACAA+AGG + tig0024351:40578-40597 None:intergenic 20.0%
!! TGTCTATAGTTTATATAAGT+AGG - tig0024351:40579-40598 Msa1416440:intron 20.0%
!! GTCTATAGTTTATATAAGTA+GGG - tig0024351:40580-40599 Msa1416440:intron 20.0%
!!! TTCTTTCTAAAGAAGAAATT+AGG - tig0024351:40873-40892 Msa1416440:intron 20.0%
!!! AAAAAAAAGCTAAACTTGTT+TGG + tig0024351:41096-41115 None:intergenic 20.0%
!! TGTTTACATTGTGAATTAAA+TGG - tig0024351:41448-41467 Msa1416440:CDS 20.0%
!! AAAAACAATACAAGTTTAGT+GGG + tig0024351:41484-41503 None:intergenic 20.0%
!! AAAAAACAATACAAGTTTAG+TGG + tig0024351:41485-41504 None:intergenic 20.0%
!!! TTTTAACCCTAATTTTTTTG+TGG - tig0024351:41534-41553 Msa1416440:CDS 20.0%
!!! GTGTTTCAAGTTAAATATAT+CGG - tig0024351:41589-41608 Msa1416440:CDS 20.0%
!!! TTTTCATAATTTTCTGTACT+TGG - tig0024351:41927-41946 Msa1416440:CDS 20.0%
!!! TTGATGATATAACTCAATTT+TGG + tig0024351:42267-42286 None:intergenic 20.0%
!!! TATTAGAATTCCATTTTTAC+TGG - tig0024351:42513-42532 Msa1416440:CDS 20.0%
!!! CTTTATCTTTTATCCTATTA+AGG + tig0024351:42876-42895 None:intergenic 20.0%
!! CTTAATAGGATAAAAGATAA+AGG - tig0024351:42874-42893 Msa1416440:CDS 20.0%
!! AAATCAGAAAGAAAAAAAGA+AGG + tig0024351:43008-43027 None:intergenic 20.0%
!!! TTAGTATTGATATTATGTCA+TGG + tig0024351:43330-43349 None:intergenic 20.0%
!!! GATTTCTAAAATCAATTTAC+TGG + tig0024351:43700-43719 None:intergenic 20.0%
!!! TTAAGAGCTTTCTTATTTAT+GGG + tig0024351:43793-43812 None:intergenic 20.0%
!!! TTGTTTAATTTGATTGGTGA+TGG + tig0024351:37195-37214 None:intergenic 25.0%
! CTACTGTTGAAAAATTCATA+TGG - tig0024351:37365-37384 Msa1416440:intron 25.0%
!! GTTTGTATTTGTATTTGTTG+AGG - tig0024351:37500-37519 Msa1416440:intron 25.0%
! GCAATAATAAAAATGGGTAA+CGG - tig0024351:37546-37565 Msa1416440:intron 25.0%
! TTGTTTATTGGGATATATGA+CGG - tig0024351:38491-38510 Msa1416440:intron 25.0%
! TGTCTAGAAATCTATAAAGA+TGG + tig0024351:38553-38572 None:intergenic 25.0%
!! TAGATTTCTAGACAAAGAAT+TGG - tig0024351:38559-38578 Msa1416440:intron 25.0%
! ATTTAACAATGAGATAGTTG+AGG - tig0024351:38763-38782 Msa1416440:intron 25.0%
! GAAAAGGTAAAAGAAGTTTA+AGG - tig0024351:38885-38904 Msa1416440:intron 25.0%
!! TCTTGATAACATGATTGTTA+TGG + tig0024351:39636-39655 None:intergenic 25.0%
! ATAGAATATTTGACCATAAC+TGG + tig0024351:39813-39832 None:intergenic 25.0%
!!! GTCTGATAAAATTTTAGAAC+AGG + tig0024351:39898-39917 None:intergenic 25.0%
!! CAGACTTGAATTTTTGTATT+TGG - tig0024351:39913-39932 Msa1416440:intron 25.0%
! CATAAAATAGCAGAAATCTT+TGG + tig0024351:40228-40247 None:intergenic 25.0%
!!! CAAAGATTTCTGCTATTTTA+TGG - tig0024351:40226-40245 Msa1416440:CDS 25.0%
!!! CAAACATAATTTTGCTATTG+AGG - tig0024351:40812-40831 Msa1416440:intron 25.0%
!!! CTAAAATAAGAGCTTTAGAA+AGG + tig0024351:41120-41139 None:intergenic 25.0%
!! TTTTAATGCCAAAATAAGTC+AGG - tig0024351:41157-41176 Msa1416440:CDS 25.0%
! ATCACTATTAGTAGTTGTAT+AGG - tig0024351:41349-41368 Msa1416440:CDS 25.0%
! TCATGATTGTATATGATTCT+TGG - tig0024351:41382-41401 Msa1416440:CDS 25.0%
! CATGATTGTATATGATTCTT+GGG - tig0024351:41383-41402 Msa1416440:CDS 25.0%
!!! TTGTTTTTTGTTGCCTAATT+TGG - tig0024351:41496-41515 Msa1416440:CDS 25.0%
! GCTATACCACAAAAAAATTA+GGG + tig0024351:41543-41562 None:intergenic 25.0%
! CTGTTACAATAATATCTGAT+GGG + tig0024351:41853-41872 None:intergenic 25.0%
! ACTGTTACAATAATATCTGA+TGG + tig0024351:41854-41873 None:intergenic 25.0%
! TCTGCTATAATTGAATTTAG+AGG - tig0024351:42000-42019 Msa1416440:CDS 25.0%
! CTGCTATAATTGAATTTAGA+GGG - tig0024351:42001-42020 Msa1416440:CDS 25.0%
!!! CTTTTAGTTAAACTGAAGTT+TGG - tig0024351:42129-42148 Msa1416440:CDS 25.0%
!! TAAATCTTTGGTTTCGATTT+CGG - tig0024351:42155-42174 Msa1416440:CDS 25.0%
!!! TAACTCAATTTTGGAAACAA+AGG + tig0024351:42258-42277 None:intergenic 25.0%
! GGAATTCTAATAAAGATGTT+CGG + tig0024351:42505-42524 None:intergenic 25.0%
!! GCTTTTAATATTCATGGAAA+GGG + tig0024351:42587-42606 None:intergenic 25.0%
!! AGCTTTTAATATTCATGGAA+AGG + tig0024351:42588-42607 None:intergenic 25.0%
!!! ACATATAGTTTGTTTTCAAC+CGG - tig0024351:42702-42721 Msa1416440:CDS 25.0%
! AAATCAGTTGCCAATTATTT+GGG + tig0024351:42983-43002 None:intergenic 25.0%
! AAAATCAGTTGCCAATTATT+TGG + tig0024351:42984-43003 None:intergenic 25.0%
! CTATTTGTAACAACAAACAT+AGG - tig0024351:43250-43269 Msa1416440:five_prime_UTR 25.0%
! AGAAACACAAGAATCATAAA+TGG + tig0024351:43279-43298 None:intergenic 25.0%
! TCAAGACAATATGCAAATAT+GGG + tig0024351:43659-43678 None:intergenic 25.0%
! ATCAAGACAATATGCAAATA+TGG + tig0024351:43660-43679 None:intergenic 25.0%
! TCTTGATATTGAAACAATCT+TGG - tig0024351:43673-43692 Msa1416440:five_prime_UTR 25.0%
! CTTGATATTGAAACAATCTT+GGG - tig0024351:43674-43693 Msa1416440:five_prime_UTR 25.0%
! AATTCAAAACAAATTAGGAC+TGG + tig0024351:43767-43786 None:intergenic 25.0%
! GGGTAAATTCAAAACAAATT+AGG + tig0024351:43772-43791 None:intergenic 25.0%
!! TAAGAGCTTTCTTATTTATG+GGG + tig0024351:43792-43811 None:intergenic 25.0%
!! GTTAAGAGCTTTCTTATTTA+TGG + tig0024351:43794-43813 None:intergenic 25.0%
CTCTTTCTTTCTTCTTTCTT+GGG + tig0024351:36901-36920 None:intergenic 30.0%
TCTCTTTCTTTCTTCTTTCT+TGG + tig0024351:36902-36921 None:intergenic 30.0%
! ATAAACACAAGTAGGTTGAA+GGG + tig0024351:37125-37144 None:intergenic 30.0%
ATTGAGACATAAACACAAGT+AGG + tig0024351:37133-37152 None:intergenic 30.0%
GTTTATGTCTCAATGATTCA+AGG - tig0024351:37139-37158 Msa1416440:exon 30.0%
!! TTTAATTTGATTGGTGATGG+TGG + tig0024351:37192-37211 None:intergenic 30.0%
AAACACAAAAACCCATTTCA+AGG + tig0024351:37221-37240 None:intergenic 30.0%
AAAACACTCTTTACCTCAAA+GGG + tig0024351:37326-37345 None:intergenic 30.0%
AAAAACACTCTTTACCTCAA+AGG + tig0024351:37327-37346 None:intergenic 30.0%
!!! GGTTGTTTTGTGTTTTTTTG+AGG - tig0024351:37387-37406 Msa1416440:intron 30.0%
!!! TTGTGTTTTTTTGAGGTTGT+TGG - tig0024351:37394-37413 Msa1416440:intron 30.0%
!!! TGTGTTTTTTTGAGGTTGTT+GGG - tig0024351:37395-37414 Msa1416440:intron 30.0%
ATGGTCAAGTGAGTAATAAT+GGG - tig0024351:37434-37453 Msa1416440:intron 30.0%
!!! TTGATGGGTTTTTAGCTAAT+TGG - tig0024351:37470-37489 Msa1416440:intron 30.0%
!!! TGATGGGTTTTTAGCTAATT+GGG - tig0024351:37471-37490 Msa1416440:intron 30.0%
!! ACACCATTTTTACCATTGAA+TGG + tig0024351:37600-37619 None:intergenic 30.0%
!! TGGTAAAAATGGTGTTGATT+TGG - tig0024351:37605-37624 Msa1416440:intron 30.0%
!!! TTTTTAGAGCCATTAGATGA+AGG - tig0024351:37630-37649 Msa1416440:intron 30.0%
! CACTGATAAATCCAACTTTT+CGG - tig0024351:38145-38164 Msa1416440:intron 30.0%
TGTTTATACTCAGCTTCATA+CGG + tig0024351:38392-38411 None:intergenic 30.0%
! TAGTTCTTTCTGAAGAACAA+GGG - tig0024351:38465-38484 Msa1416440:intron 30.0%
TTTCTAGACAAAGAATTGGA+AGG - tig0024351:38563-38582 Msa1416440:intron 30.0%
AAGAATTGGAAGGTTTACTT+TGG - tig0024351:38573-38592 Msa1416440:intron 30.0%
AGAATTGGAAGGTTTACTTT+GGG - tig0024351:38574-38593 Msa1416440:intron 30.0%
!!! TTTTAAAGTTTCAGGGACTT+CGG + tig0024351:38633-38652 None:intergenic 30.0%
GATTGATCCTTGATTAATTC+AGG + tig0024351:38743-38762 None:intergenic 30.0%
TACTTCCACAATTAGATAAC+TGG + tig0024351:38820-38839 None:intergenic 30.0%
!! AAATCCAGAACTTGCTATAA+TGG - tig0024351:39399-39418 Msa1416440:intron 30.0%
!! AATCCAGAACTTGCTATAAT+GGG - tig0024351:39400-39419 Msa1416440:intron 30.0%
AGATGTTTATGTCATGAATC+TGG - tig0024351:39456-39475 Msa1416440:intron 30.0%
GATGTTTATGTCATGAATCT+GGG - tig0024351:39457-39476 Msa1416440:intron 30.0%
TGATTGTTATGGTTGTGAAT+TGG + tig0024351:39625-39644 None:intergenic 30.0%
ATTTGCAAAATGATATCTCG+CGG + tig0024351:39669-39688 None:intergenic 30.0%
ATTTGATTCACCAATACACA+GGG + tig0024351:39761-39780 None:intergenic 30.0%
TATTTGATTCACCAATACAC+AGG + tig0024351:39762-39781 None:intergenic 30.0%
TTGAAGATCTAAACCAGTTA+TGG - tig0024351:39797-39816 Msa1416440:intron 30.0%
GATCAGAAAAGTTCAATGAT+CGG + tig0024351:40020-40039 None:intergenic 30.0%
CACTTAGTAATTCAGTGTAT+AGG + tig0024351:40056-40075 None:intergenic 30.0%
AAAAAACATTTGACACTCGA+CGG + tig0024351:40285-40304 None:intergenic 30.0%
TTTCACTCGATCATTCAATA+TGG + tig0024351:40456-40475 None:intergenic 30.0%
ATATTGAATGATCGAGTGAA+AGG - tig0024351:40455-40474 Msa1416440:intron 30.0%
! TTAAAAGTTACCAGAGCATT+TGG - tig0024351:40482-40501 Msa1416440:intron 30.0%
CATCAAACTGAATTTCAGAT+GGG + tig0024351:40550-40569 None:intergenic 30.0%
! CCTAAGTTTTCTGTATGTTA+TGG + tig0024351:40629-40648 None:intergenic 30.0%
CCATAACATACAGAAAACTT+AGG - tig0024351:40626-40645 Msa1416440:intron 30.0%
ACAGAAAACTTAGGAAGAAA+AGG - tig0024351:40635-40654 Msa1416440:intron 30.0%
! CGTTAAATTTTTCGCCAAAA+TGG - tig0024351:40681-40700 Msa1416440:intron 30.0%
! AAATTTTTCGCCAAAATGGT+AGG - tig0024351:40685-40704 Msa1416440:intron 30.0%
TAGCTAAACTATATCTCTTG+TGG - tig0024351:40755-40774 Msa1416440:intron 30.0%
AGCTAAACTATATCTCTTGT+GGG - tig0024351:40756-40775 Msa1416440:intron 30.0%
! TAACGGATGAAATAGTCAAT+GGG - tig0024351:40786-40805 Msa1416440:intron 30.0%
!!! TAATTTTGCTATTGAGGTCT+AGG - tig0024351:40818-40837 Msa1416440:intron 30.0%
CAAAAATAAGTCAGACCAAA+TGG + tig0024351:40846-40865 None:intergenic 30.0%
! TTCTTCTTTAGAAAGAAGAG+AGG + tig0024351:40870-40889 None:intergenic 30.0%
AAAAGTAGTTGAGATTTGAG+AGG - tig0024351:40977-40996 Msa1416440:intron 30.0%
! CTTGTTTGGTAGTTGTTAAA+AGG + tig0024351:41082-41101 None:intergenic 30.0%
CCAAAATAAGTCAGGTTAAA+CGG - tig0024351:41165-41184 Msa1416440:CDS 30.0%
CAAAATAAGTCAGGTTAAAC+GGG - tig0024351:41166-41185 Msa1416440:CDS 30.0%
CTTCCCTTTAAACTAGAATA+GGG + tig0024351:41193-41212 None:intergenic 30.0%
CTTTATACAAACAAGCTTCT+AGG - tig0024351:41272-41291 Msa1416440:CDS 30.0%
AGTAGTTGTATAGGTTCATA+TGG - tig0024351:41358-41377 Msa1416440:CDS 30.0%
! TGTATATGATTCTTGGGTTT+TGG - tig0024351:41389-41408 Msa1416440:CDS 30.0%
GGCTATACCACAAAAAAATT+AGG + tig0024351:41544-41563 None:intergenic 30.0%
CTTCTTCATTGCTGAAATAT+TGG + tig0024351:41708-41727 None:intergenic 30.0%
ATATTTCAGCAATGAAGAAG+TGG - tig0024351:41708-41727 Msa1416440:CDS 30.0%
CAATAATATCTGATGGGAAT+AGG + tig0024351:41847-41866 None:intergenic 30.0%
! GAAGTTTGGAACTAAATCTT+TGG - tig0024351:42143-42162 Msa1416440:CDS 30.0%
! AAATCTTTGGTTTCGATTTC+GGG - tig0024351:42156-42175 Msa1416440:CDS 30.0%
! ATGGCAGCTTTTAATATTCA+TGG + tig0024351:42593-42612 None:intergenic 30.0%
AATATTAAAAGCTGCCATGT+AGG - tig0024351:42595-42614 Msa1416440:CDS 30.0%
ATATTAAAAGCTGCCATGTA+GGG - tig0024351:42596-42615 Msa1416440:CDS 30.0%
AACAATAAGTCTCTTGTAGA+GGG + tig0024351:42648-42667 None:intergenic 30.0%
AAACAATAAGTCTCTTGTAG+AGG + tig0024351:42649-42668 None:intergenic 30.0%
!!! CATATAGTTTGTTTTCAACC+GGG - tig0024351:42703-42722 Msa1416440:CDS 30.0%
TAATTTATTACTTTGCCCTC+TGG - tig0024351:42772-42791 Msa1416440:CDS 30.0%
AATCAGTTGCCAATTATTTG+GGG + tig0024351:42982-43001 None:intergenic 30.0%
! TTTCCTTCTGTTTTCAAAAC+CGG - tig0024351:43027-43046 Msa1416440:CDS 30.0%
AGCACTGCTCTTATATTATT+AGG + tig0024351:43130-43149 None:intergenic 30.0%
GACAATGTTTATTGTTACGA+AGG + tig0024351:43308-43327 None:intergenic 30.0%
!! TTAACAGAGAAGCACTTAAA+AGG + tig0024351:43620-43639 None:intergenic 30.0%
! AGTGCTTCTCTGTTAATTTT+TGG - tig0024351:43624-43643 Msa1416440:five_prime_UTR 30.0%
!!! TTCTCTGTTAATTTTTGGCT+AGG - tig0024351:43629-43648 Msa1416440:five_prime_UTR 30.0%
AAGACAATATGCAAATATGG+GGG + tig0024351:43657-43676 None:intergenic 30.0%
CAAGACAATATGCAAATATG+GGG + tig0024351:43658-43677 None:intergenic 30.0%
GAACAAAGATTGAGACAAAG+AGG + tig0024351:37070-37089 None:intergenic 35.0%
! TAAACACAAGTAGGTTGAAG+GGG + tig0024351:37124-37143 None:intergenic 35.0%
! CATAAACACAAGTAGGTTGA+AGG + tig0024351:37126-37145 None:intergenic 35.0%
CATGGTCAAGTGAGTAATAA+TGG - tig0024351:37433-37452 Msa1416440:intron 35.0%
TGGTCAAGTGAGTAATAATG+GGG - tig0024351:37435-37454 Msa1416440:intron 35.0%
! AGTAATAATGGGGTGGTTAT+GGG - tig0024351:37445-37464 Msa1416440:intron 35.0%
!! TGTATTTGTTGAGGGTTTTG+AGG - tig0024351:37509-37528 Msa1416440:intron 35.0%
! GTGCCATTCAATGGTAAAAA+TGG - tig0024351:37594-37613 Msa1416440:intron 35.0%
TGTCCTAAACCTTCATCTAA+TGG + tig0024351:37642-37661 None:intergenic 35.0%
!! ATCAAGAGTGCTTGAATCAA+CGG + tig0024351:37736-37755 None:intergenic 35.0%
TTCGTTTAGGCATGATAGTA+TGG - tig0024351:37773-37792 Msa1416440:intron 35.0%
! ATGGAGCATTCTAATTCTTC+TGG - tig0024351:37792-37811 Msa1416440:intron 35.0%
TCGTCTTAAACGTAGTTTCA+GGG + tig0024351:37842-37861 None:intergenic 35.0%
ATCGTCTTAAACGTAGTTTC+AGG + tig0024351:37843-37862 None:intergenic 35.0%
! ACTACGTTTAAGACGATTTC+AGG - tig0024351:37846-37865 Msa1416440:intron 35.0%
! CTACGTTTAAGACGATTTCA+GGG - tig0024351:37847-37866 Msa1416440:intron 35.0%
! TACGTTTAAGACGATTTCAG+GGG - tig0024351:37848-37867 Msa1416440:intron 35.0%
CCAGACATAAAACCATTCAA+AGG + tig0024351:38026-38045 None:intergenic 35.0%
!!! CCTTTGAATGGTTTTATGTC+TGG - tig0024351:38023-38042 Msa1416440:intron 35.0%
GATTTATCAGTGTCATCAAG+AGG + tig0024351:38137-38156 None:intergenic 35.0%
! GTAGTTCTTTCTGAAGAACA+AGG - tig0024351:38464-38483 Msa1416440:intron 35.0%
AACAAGGGTGGTTGTTTATT+GGG - tig0024351:38480-38499 Msa1416440:intron 35.0%
ATCAAAAAATCAGGTGCATC+TGG + tig0024351:38527-38546 None:intergenic 35.0%
AGATGGCTCATCAAAAAATC+AGG + tig0024351:38536-38555 None:intergenic 35.0%
! TTTAAAGTTTCAGGGACTTC+GGG + tig0024351:38632-38651 None:intergenic 35.0%
!!! CGGTAGCTTTTAAAGTTTCA+GGG + tig0024351:38640-38659 None:intergenic 35.0%
!!! ACGGTAGCTTTTAAAGTTTC+AGG + tig0024351:38641-38660 None:intergenic 35.0%
!!! GAATGTTTTGAAGCTTGTTC+TGG - tig0024351:38716-38735 Msa1416440:intron 35.0%
TTCTGGTCCTGAATTAATCA+AGG - tig0024351:38733-38752 Msa1416440:intron 35.0%
CAATGAGATAGTTGAGGAAA+AGG - tig0024351:38769-38788 Msa1416440:intron 35.0%
GAACACCAGTTATCTAATTG+TGG - tig0024351:38812-38831 Msa1416440:intron 35.0%
GTTCAACATGAAAAGTTGAC+TGG - tig0024351:38863-38882 Msa1416440:intron 35.0%
CATGAAAAGTTGACTGGAAA+AGG - tig0024351:38869-38888 Msa1416440:intron 35.0%
GCTTTATGAGCTACTTCAAA+TGG - tig0024351:38907-38926 Msa1416440:intron 35.0%
AGCTACTTCAAATGGAATCT+TGG - tig0024351:38915-38934 Msa1416440:intron 35.0%
GCTACTTCAAATGGAATCTT+GGG - tig0024351:38916-38935 Msa1416440:CDS 35.0%
!! TCATCTAGTATTGACTCCAT+CGG + tig0024351:38968-38987 None:intergenic 35.0%
! TTTTTCCTGCTTCTGTATCA+AGG - tig0024351:39113-39132 Msa1416440:CDS 35.0%
AGTTTCTTACACAAGGACTT+TGG + tig0024351:39193-39212 None:intergenic 35.0%
AGGAAAGAGTTTCTTACACA+AGG + tig0024351:39200-39219 None:intergenic 35.0%
TGTGTAAGAAACTCTTTCCT+TGG - tig0024351:39200-39219 Msa1416440:intron 35.0%
TCTTTCCTTGGAGTTATGAT+TGG - tig0024351:39212-39231 Msa1416440:intron 35.0%
TTGGAGTTATGATTGGCATA+GGG - tig0024351:39219-39238 Msa1416440:intron 35.0%
GAGAAAATATTAGAAGCCTC+TGG - tig0024351:39259-39278 Msa1416440:intron 35.0%
!! TAACGCAGTTTTAACAGCAA+TGG - tig0024351:39315-39334 Msa1416440:intron 35.0%
!! ATCCAGAACTTGCTATAATG+GGG - tig0024351:39401-39420 Msa1416440:intron 35.0%
! TGTTCTAGTGATGTTGATGA+AGG - tig0024351:39429-39448 Msa1416440:intron 35.0%
!! TTGTATTTGGTTCTGCTTCT+TGG - tig0024351:39926-39945 Msa1416440:intron 35.0%
!! TTGGTGATTTTGCATTCATC+AGG - tig0024351:40153-40172 Msa1416440:intron 35.0%
AAAAACATTTGACACTCGAC+GGG + tig0024351:40284-40303 None:intergenic 35.0%
TTTCAATTTCTGTTTCCTGC+AGG - tig0024351:40388-40407 Msa1416440:intron 35.0%
TTATTCTTGAAACTTCCTGC+AGG + tig0024351:40406-40425 None:intergenic 35.0%
GCATCAAACTGAATTTCAGA+TGG + tig0024351:40551-40570 None:intergenic 35.0%
! CCAGTGATTTGTATGATTCA+AGG + tig0024351:40718-40737 None:intergenic 35.0%
CCTTGAATCATACAAATCAC+TGG - tig0024351:40715-40734 Msa1416440:intron 35.0%
!! GTAACGGATGAAATAGTCAA+TGG - tig0024351:40785-40804 Msa1416440:intron 35.0%
AACGGATGAAATAGTCAATG+GGG - tig0024351:40787-40806 Msa1416440:intron 35.0%
! AGGAGCTTTTCAAAACAAGT+AGG - tig0024351:40997-41016 Msa1416440:intron 35.0%
! CCGTTTAACCTGACTTATTT+TGG + tig0024351:41168-41187 None:intergenic 35.0%
!! GGACCCTATTCTAGTTTAAA+GGG - tig0024351:41187-41206 Msa1416440:CDS 35.0%
CCTTCCCTTTAAACTAGAAT+AGG + tig0024351:41194-41213 None:intergenic 35.0%
!! CCTATTCTAGTTTAAAGGGA+AGG - tig0024351:41191-41210 Msa1416440:CDS 35.0%
TCGATTATAGCGTAGATCAT+TGG - tig0024351:41218-41237 Msa1416440:CDS 35.0%
!!! TGATTCTTGGGTTTTGGAAT+AGG - tig0024351:41395-41414 Msa1416440:CDS 35.0%
AGTAGAGCTTCGTTAAAAGA+CGG + tig0024351:41565-41584 None:intergenic 35.0%
TTCATGGAAAATGTTCCAGA+AGG - tig0024351:41748-41767 Msa1416440:CDS 35.0%
AATATCTGATGGGAATAGGA+AGG + tig0024351:41843-41862 None:intergenic 35.0%
!!! GTGTATGTTTAGTTTTGCAG+TGG + tig0024351:42408-42427 None:intergenic 35.0%
CAAAGTTAGCTGTCTTCTAT+TGG + tig0024351:42430-42449 None:intergenic 35.0%
TTCTGAATTTGTCACGACAT+AGG - tig0024351:42672-42691 Msa1416440:CDS 35.0%
TCTGAATTTGTCACGACATA+GGG - tig0024351:42673-42692 Msa1416440:CDS 35.0%
GTAGTAGAAACTGGTATCTA+TGG - tig0024351:42733-42752 Msa1416440:CDS 35.0%
GATGATGATTCTCAAAACAG+AGG - tig0024351:42797-42816 Msa1416440:CDS 35.0%
CTATTAAGGAACTACCATTG+TGG + tig0024351:42862-42881 None:intergenic 35.0%
CACAATGGTAGTTCCTTAAT+AGG - tig0024351:42860-42879 Msa1416440:CDS 35.0%
ATATCCACTCCCCAAATAAT+TGG - tig0024351:42970-42989 Msa1416440:CDS 35.0%
CAACCAGCAGTTATGTTATT+AGG + tig0024351:43053-43072 None:intergenic 35.0%
! ATAACATAACTGCTGGTTGT+TGG - tig0024351:43054-43073 Msa1416440:CDS 35.0%
! GGTTGTTGGCTAATAACATA+AGG - tig0024351:43068-43087 Msa1416440:CDS 35.0%
AGAGAAGAATGCATACAGTT+AGG - tig0024351:43177-43196 Msa1416440:exon 35.0%
! AGATTTGACCAATCAAGTTG+TGG - tig0024351:43200-43219 Msa1416440:five_prime_UTR 35.0%
CAAATAGTAACTACCTACTC+CGG + tig0024351:43237-43256 None:intergenic 35.0%
GAAAATCCATTCCTGCATAT+TGG + tig0024351:43469-43488 None:intergenic 35.0%
TTGATATTCCTCATGGAGAT+CGG - tig0024351:43498-43517 Msa1416440:five_prime_UTR 35.0%
TCAAAACAAATTAGGACTGG+TGG + tig0024351:43764-43783 None:intergenic 35.0%
TGAGATCCTATCAAAGGACA+CGG + tig0024351:36930-36949 None:intergenic 40.0%
!! GGGAATTTGATGATGATGCA+TGG - tig0024351:37415-37434 Msa1416440:intron 40.0%
! TCAAGTGAGTAATAATGGGG+TGG - tig0024351:37438-37457 Msa1416440:intron 40.0%
! GAGTAATAATGGGGTGGTTA+TGG - tig0024351:37444-37463 Msa1416440:intron 40.0%
! GTAATAATGGGGTGGTTATG+GGG - tig0024351:37446-37465 Msa1416440:intron 40.0%
!!! TGTTGAGGGTTTTGAGGTTT+AGG - tig0024351:37515-37534 Msa1416440:intron 40.0%
! GGTTGTTTAGTGCCATTCAA+TGG - tig0024351:37585-37604 Msa1416440:intron 40.0%
GAGCCATTAGATGAAGGTTT+AGG - tig0024351:37636-37655 Msa1416440:intron 40.0%
GCAGGAGATTCAAACATAGT+TGG + tig0024351:37684-37703 None:intergenic 40.0%
!! GAATTCGATGGACTAATAGC+AGG + tig0024351:37702-37721 None:intergenic 40.0%
TTAGTCCATCGAATTCTGAG+AGG - tig0024351:37706-37725 Msa1416440:intron 40.0%
GTAAACCTCTCAGAATTCGA+TGG + tig0024351:37714-37733 None:intergenic 40.0%
!! CTTGATTCTGAAACCTTGAG+TGG - tig0024351:37750-37769 Msa1416440:intron 40.0%
AAACCTTGAGTGGTTCGTTT+AGG - tig0024351:37760-37779 Msa1416440:intron 40.0%
!! TTCTTCTGGTTTACACAAGC+AGG - tig0024351:37806-37825 Msa1416440:intron 40.0%
!! TCTTCTGGTTTACACAAGCA+GGG - tig0024351:37807-37826 Msa1416440:intron 40.0%
CAAGAAATCACCAGCAAACA+TGG + tig0024351:37928-37947 None:intergenic 40.0%
! CATGTTTGCTGGTGATTTCT+TGG - tig0024351:37926-37945 Msa1416440:intron 40.0%
!!! TGGTTTTATGTCTGGTCCTT+TGG - tig0024351:38031-38050 Msa1416440:intron 40.0%
AAACCACCACTTCTATCCAA+TGG + tig0024351:38077-38096 None:intergenic 40.0%
!! CATCTCATGAGAAGTGTTAG+TGG - tig0024351:38206-38225 Msa1416440:intron 40.0%
AACATTCTCTAAGCACTCCA+TGG - tig0024351:38253-38272 Msa1416440:intron 40.0%
ACATTCTCTAAGCACTCCAT+GGG - tig0024351:38254-38273 Msa1416440:intron 40.0%
GCAAAGGTTGTTCTTTCAAC+CGG - tig0024351:38289-38308 Msa1416440:intron 40.0%
CTACACTTAGTATCTCTGGA+AGG + tig0024351:38332-38351 None:intergenic 40.0%
CTTCCAGAGATACTAAGTGT+AGG - tig0024351:38330-38349 Msa1416440:intron 40.0%
TACATGAACCCTATCTTCAC+CGG + tig0024351:38447-38466 None:intergenic 40.0%
! TTCTTTCTGAAGAACAAGGG+TGG - tig0024351:38468-38487 Msa1416440:intron 40.0%
GAACAAGGGTGGTTGTTTAT+TGG - tig0024351:38479-38498 Msa1416440:intron 40.0%
!! GGGATATATGACGGTTTTAG+TGG - tig0024351:38500-38519 Msa1416440:intron 40.0%
TAATGATTCCTCAGTTCCGA+TGG - tig0024351:38949-38968 Msa1416440:CDS 40.0%
TCGTCTACTGTAAGAGAAGA+TGG - tig0024351:39004-39023 Msa1416440:CDS 40.0%
!! AGAAGATGGCTCTAAACATC+AGG - tig0024351:39018-39037 Msa1416440:CDS 40.0%
CTATGCCAATCATAACTCCA+AGG + tig0024351:39220-39239 None:intergenic 40.0%
CTTGGAGTTATGATTGGCAT+AGG - tig0024351:39218-39237 Msa1416440:intron 40.0%
! GCATTTTCTAATAGGTCCAG+AGG + tig0024351:39278-39297 None:intergenic 40.0%
CTGGACCTATTAGAAAATGC+AGG - tig0024351:39278-39297 Msa1416440:intron 40.0%
! CCAGACCTGCATTTTCTAAT+AGG + tig0024351:39286-39305 None:intergenic 40.0%
CCTATTAGAAAATGCAGGTC+TGG - tig0024351:39283-39302 Msa1416440:intron 40.0%
AGCTCTTGAAAGAACAGAAG+AGG - tig0024351:39342-39361 Msa1416440:intron 40.0%
! AAGAACAGAAGAGGCATACA+TGG - tig0024351:39351-39370 Msa1416440:intron 40.0%
! AGAAGAGGCATACATGGAAA+CGG - tig0024351:39357-39376 Msa1416440:intron 40.0%
TGACAGAGCTTGAATTAGGA+TGG + tig0024351:39525-39544 None:intergenic 40.0%
TCCTAATTCAAGCTCTGTCA+AGG - tig0024351:39525-39544 Msa1416440:intron 40.0%
TCCTTGACAGAGCTTGAATT+AGG + tig0024351:39529-39548 None:intergenic 40.0%
TAGAGAGTCATTAGTACGCA+TGG - tig0024351:39573-39592 Msa1416440:intron 40.0%
GGAACATACCTCTTCAATAC+TGG + tig0024351:39731-39750 None:intergenic 40.0%
TGCACAACAGAATGATCTGT+TGG - tig0024351:40134-40153 Msa1416440:intron 40.0%
ATATGGCCTGACTATCATCA+GGG + tig0024351:40439-40458 None:intergenic 40.0%
AATATGGCCTGACTATCATC+AGG + tig0024351:40440-40459 None:intergenic 40.0%
ATCATACAAATCACTGGTCC+TGG - tig0024351:40721-40740 Msa1416440:intron 40.0%
TCATACAAATCACTGGTCCT+GGG - tig0024351:40722-40741 Msa1416440:intron 40.0%
!! GGGACCCTATTCTAGTTTAA+AGG - tig0024351:41186-41205 Msa1416440:CDS 40.0%
AGCGTAGATCATTGGATTTG+CGG - tig0024351:41226-41245 Msa1416440:CDS 40.0%
TGCCTAATTTGGAAACACTG+AGG - tig0024351:41507-41526 Msa1416440:CDS 40.0%
! TTTTAACGAAGCTCTACTCG+AGG - tig0024351:41567-41586 Msa1416440:CDS 40.0%
! TTCTTCAAGTGACCGATTCT+TGG - tig0024351:41660-41679 Msa1416440:CDS 40.0%
ATATTGGTAAAGCCCATCAG+AGG + tig0024351:41692-41711 None:intergenic 40.0%
TTCCATGAACCATGTGACAT+GGG + tig0024351:41737-41756 None:intergenic 40.0%
TTTCCATGAACCATGTGACA+TGG + tig0024351:41738-41757 None:intergenic 40.0%
!! TCTGCAATAAGGTATTGTGC+AGG + tig0024351:41778-41797 None:intergenic 40.0%
AGAAGAGAAGCTCTGCAATA+AGG + tig0024351:41789-41808 None:intergenic 40.0%
TTCTGCGCTGCTAAAAAGAA+TGG - tig0024351:41805-41824 Msa1416440:CDS 40.0%
! AACCGATTCTAACCTGAAGT+TGG - tig0024351:42223-42242 Msa1416440:CDS 40.0%
! ACCGATTCTAACCTGAAGTT+GGG - tig0024351:42224-42243 Msa1416440:CDS 40.0%
! TCCCAACTTCAGGTTAGAAT+CGG + tig0024351:42228-42247 None:intergenic 40.0%
AATTACTGGATGACCCTACA+TGG + tig0024351:42612-42631 None:intergenic 40.0%
TAAGTCTCTTGTAGAGGGAT+TGG + tig0024351:42643-42662 None:intergenic 40.0%
!! GTTTGTTTTCAACCGGGTTA+TGG - tig0024351:42709-42728 Msa1416440:CDS 40.0%
GTTTCTACTACACCATAACC+CGG + tig0024351:42724-42743 None:intergenic 40.0%
GGTTATGGTGTAGTAGAAAC+TGG - tig0024351:42724-42743 Msa1416440:CDS 40.0%
GAGAATCATCATCATCCAGA+GGG + tig0024351:42790-42809 None:intergenic 40.0%
TGAGAATCATCATCATCCAG+AGG + tig0024351:42791-42810 None:intergenic 40.0%
!! GACTCTTGAACTTCTAGGAT+AGG + tig0024351:42903-42922 None:intergenic 40.0%
TCCTAGAAGTTCAAGAGTCT+TGG - tig0024351:42904-42923 Msa1416440:CDS 40.0%
ACCAAGACTCTTGAACTTCT+AGG + tig0024351:42908-42927 None:intergenic 40.0%
! GAGTGGATATTGATTGAGAG+AGG + tig0024351:42960-42979 None:intergenic 40.0%
CAGCAGTTATGTTATTAGGC+CGG + tig0024351:43049-43068 None:intergenic 40.0%
AAATGCTAACAAGTGCCCTT+AGG - tig0024351:43092-43111 Msa1416440:CDS 40.0%
ATCCATTCCTGCATATTGGA+GGG + tig0024351:43465-43484 None:intergenic 40.0%
AATCCATTCCTGCATATTGG+AGG + tig0024351:43466-43485 None:intergenic 40.0%
GAACTGCTTGATATTCCTCA+TGG - tig0024351:43491-43510 Msa1416440:five_prime_UTR 40.0%
TCACGATGATGTATCTGTCA+TGG - tig0024351:43529-43548 Msa1416440:five_prime_UTR 40.0%
ATCTGTCATGGTCGTTTCTT+TGG - tig0024351:43541-43560 Msa1416440:five_prime_UTR 40.0%
! TTTCTTTGGAGGGAAGGATT+TGG - tig0024351:43555-43574 Msa1416440:five_prime_UTR 40.0%
! GGCAGCAGTAAAGGATTTTA+GGG + tig0024351:43816-43835 None:intergenic 40.0%
GAGATCCTATCAAAGGACAC+GGG + tig0024351:36929-36948 None:intergenic 45.0%
! CAGCGTTGAGATCCTATCAA+AGG + tig0024351:36936-36955 None:intergenic 45.0%
TCCTTTGATCTGACCCTTTG+AGG - tig0024351:37310-37329 Msa1416440:intron 45.0%
ACCTCAAAGGGTCAGATCAA+AGG + tig0024351:37314-37333 None:intergenic 45.0%
ATGCCTAAACGAACCACTCA+AGG + tig0024351:37766-37785 None:intergenic 45.0%
! TGTCCTTGCTGTGGAAACAT+TGG + tig0024351:37886-37905 None:intergenic 45.0%
AATGTTTCCACAGCAAGGAC+AGG - tig0024351:37885-37904 Msa1416440:intron 45.0%
ACTTCTATCCAATGGACCTG+AGG + tig0024351:38069-38088 None:intergenic 45.0%
TCAGGTCCATTGGATAGAAG+TGG - tig0024351:38068-38087 Msa1416440:intron 45.0%
AGAAGTGGTGGTTTCATGTC+TGG - tig0024351:38083-38102 Msa1416440:intron 45.0%
GAAGTGGTGGTTTCATGTCT+GGG - tig0024351:38084-38103 Msa1416440:intron 45.0%
GACATAACCCCCTTCTCTAT+CGG + tig0024351:38110-38129 None:intergenic 45.0%
ATAGAGAAGGGGGTTATGTC+AGG - tig0024351:38110-38129 Msa1416440:intron 45.0%
CTCATGAGATGTTGTAGACG+CGG + tig0024351:38197-38216 None:intergenic 45.0%
!! CATGAGAAGTGTTAGTGGAC+CGG - tig0024351:38211-38230 Msa1416440:intron 45.0%
CGAGAAAACGTGTTCTTCAC+CGG + tig0024351:38233-38252 None:intergenic 45.0%
CTTTCAACCGGTTACTCAGT+TGG - tig0024351:38301-38320 Msa1416440:intron 45.0%
CAGAGATACTAAGTGTAGGC+CGG - tig0024351:38334-38353 Msa1416440:intron 45.0%
AACACACGCATAATCTGCAG+TGG - tig0024351:38408-38427 Msa1416440:intron 45.0%
ACACACGCATAATCTGCAGT+GGG - tig0024351:38409-38428 Msa1416440:intron 45.0%
TCGGGTTTAAGGGAATCTAC+AGG + tig0024351:38614-38633 None:intergenic 45.0%
! TTCAGGGACTTCGGGTTTAA+GGG + tig0024351:38624-38643 None:intergenic 45.0%
! TTTCAGGGACTTCGGGTTTA+AGG + tig0024351:38625-38644 None:intergenic 45.0%
!! TATTGACTCCATCGGAACTG+AGG + tig0024351:38960-38979 None:intergenic 45.0%
TCTCTTACAGTAGACGAGCA+AGG + tig0024351:39001-39020 None:intergenic 45.0%
!! GGCTCTAAACATCAGGATGA+AGG - tig0024351:39025-39044 Msa1416440:CDS 45.0%
! CATTTTCCCCTGATGTAGAC+GGG + tig0024351:39051-39070 None:intergenic 45.0%
! CCATTTTCCCCTGATGTAGA+CGG + tig0024351:39052-39071 None:intergenic 45.0%
!! GAAAATGGAAGCACTGGGTT+TGG - tig0024351:39064-39083 Msa1416440:CDS 45.0%
! TGGGTTTGGTTCAACCAACA+AGG - tig0024351:39078-39097 Msa1416440:CDS 45.0%
TTCTGCCTTGATACAGAAGC+AGG + tig0024351:39121-39140 None:intergenic 45.0%
GACCCCATTATAGCAAGTTC+TGG + tig0024351:39406-39425 None:intergenic 45.0%
! GGGAGATAGTCGTGTGATTT+TGG - tig0024351:39477-39496 Msa1416440:intron 45.0%
TGATTCACCAATACACAGGG+AGG + tig0024351:39758-39777 None:intergenic 45.0%
AGAACACCCTGATGATAGTC+AGG - tig0024351:40430-40449 Msa1416440:intron 45.0%
! AGGTGCACTTCCTACCATTT+TGG + tig0024351:40698-40717 None:intergenic 45.0%
TTAGCTATCACACATGACCC+AGG + tig0024351:40742-40761 None:intergenic 45.0%
CTCTTGTGGGTGTGTAGTAA+CGG - tig0024351:40769-40788 Msa1416440:intron 45.0%
ATTGAGGTCTAGGCTCCATT+TGG - tig0024351:40828-40847 Msa1416440:intron 45.0%
GCGTAGATCATTGGATTTGC+GGG - tig0024351:41227-41246 Msa1416440:CDS 45.0%
GGCCTCAGTGTTTCCAAATT+AGG + tig0024351:41512-41531 None:intergenic 45.0%
! GAAGGAGTGCAACTTAGGTA+AGG + tig0024351:41622-41641 None:intergenic 45.0%
! GTACAGAAGGAGTGCAACTT+AGG + tig0024351:41627-41646 None:intergenic 45.0%
AGTCGATGGTGAAGTACAGA+AGG + tig0024351:41640-41659 None:intergenic 45.0%
GGTCACTTGAAGAAAGTCGA+TGG + tig0024351:41654-41673 None:intergenic 45.0%
!! CAGAGGAGAGTACCAAGAAT+CGG + tig0024351:41675-41694 None:intergenic 45.0%
TTCTTGGTACTCTCCTCTGA+TGG - tig0024351:41676-41695 Msa1416440:CDS 45.0%
TCTTGGTACTCTCCTCTGAT+GGG - tig0024351:41677-41696 Msa1416440:CDS 45.0%
! TCTTTGGTTTCGATTTCGGG+AGG - tig0024351:42159-42178 Msa1416440:CDS 45.0%
! CTTTGGTTTCGATTTCGGGA+GGG - tig0024351:42160-42179 Msa1416440:CDS 45.0%
! TTTGGTTTCGATTTCGGGAG+GGG - tig0024351:42161-42180 Msa1416440:CDS 45.0%
! CTTCAGGTTAGAATCGGTTC+TGG + tig0024351:42222-42241 None:intergenic 45.0%
!! AGGCTCTAAATCCCAACTTC+AGG + tig0024351:42238-42257 None:intergenic 45.0%
CACGCACACACCAGTAAAAA+TGG + tig0024351:42526-42545 None:intergenic 45.0%
GATTGGACGGGATGAATTAC+TGG + tig0024351:42626-42645 None:intergenic 45.0%
TCTCTTGTAGAGGGATTGGA+CGG + tig0024351:42639-42658 None:intergenic 45.0%
! AGCACTTAGAGCATCCACAA+TGG - tig0024351:42845-42864 Msa1416440:CDS 45.0%
TCTTCCCCCCAAGAATTAGA+GGG - tig0024351:42929-42948 Msa1416440:CDS 45.0%
GTTGCCAATTATTTGGGGAG+TGG + tig0024351:42977-42996 None:intergenic 45.0%
!!! AGGCCGGTTTTGAAAACAGA+AGG + tig0024351:43033-43052 None:intergenic 45.0%
CGGCCTAATAACATAACTGC+TGG - tig0024351:43047-43066 Msa1416440:CDS 45.0%
AGGCAGCAGTAACTACCTAA+GGG + tig0024351:43110-43129 None:intergenic 45.0%
TAGGCAGCAGTAACTACCTA+AGG + tig0024351:43111-43130 None:intergenic 45.0%
ATGGTCAGCCACAACTTGAT+TGG + tig0024351:43211-43230 None:intergenic 45.0%
TAACTACCTACTCCGGTGTA+TGG + tig0024351:43230-43249 None:intergenic 45.0%
TGACTTTCCCTCCAATATGC+AGG - tig0024351:43455-43474 Msa1416440:five_prime_UTR 45.0%
TTCCCTCCAATATGCAGGAA+TGG - tig0024351:43460-43479 Msa1416440:five_prime_UTR 45.0%
TATTTACGCCGATCTCCATG+AGG + tig0024351:43509-43528 None:intergenic 45.0%
TGTCATGGTCGTTTCTTTGG+AGG - tig0024351:43544-43563 Msa1416440:five_prime_UTR 45.0%
GTCATGGTCGTTTCTTTGGA+GGG - tig0024351:43545-43564 Msa1416440:five_prime_UTR 45.0%
GGGAAGGATTTGGAGATCAT+CGG - tig0024351:43565-43584 Msa1416440:five_prime_UTR 45.0%
GGAAGGATTTGGAGATCATC+GGG - tig0024351:43566-43585 Msa1416440:five_prime_UTR 45.0%
! GGGCAGCAGTAAAGGATTTT+AGG + tig0024351:43817-43836 None:intergenic 45.0%
AAACACAAGGGCAGCAGTAA+AGG + tig0024351:43825-43844 None:intergenic 45.0%
TCCTATCAAAGGACACGGGA+CGG + tig0024351:36925-36944 None:intergenic 50.0%
! CAAGTAGGTTGAAGGGGACA+GGG + tig0024351:37118-37137 None:intergenic 50.0%
! ACAAGTAGGTTGAAGGGGAC+AGG + tig0024351:37119-37138 None:intergenic 50.0%
GGGTGGTTATGGGGTTTGAT+GGG - tig0024351:37455-37474 Msa1416440:intron 50.0%
AACGGCACTTCTCGTGTTGT+TGG - tig0024351:37564-37583 Msa1416440:intron 50.0%
GTGCCAATGTTTCCACAGCA+AGG - tig0024351:37880-37899 Msa1416440:intron 50.0%
! AACCAGAGTGCCATGTTTGC+TGG - tig0024351:37915-37934 Msa1416440:intron 50.0%
! GAACCTGCTGCTTCGTTTGA+GGG - tig0024351:37948-37967 Msa1416440:intron 50.0%
! ATGTCTGGTCCTTTGGAGAG+AGG - tig0024351:38038-38057 Msa1416440:intron 50.0%
GGTCCATTGGATAGAAGTGG+TGG - tig0024351:38071-38090 Msa1416440:intron 50.0%
ATGTCTGGGCCGATAGAGAA+GGG - tig0024351:38098-38117 Msa1416440:intron 50.0%
TTCTCTAAGCACTCCATGGG+TGG - tig0024351:38257-38276 Msa1416440:intron 50.0%
TTGCATCCAACTTCCACCCA+TGG + tig0024351:38273-38292 None:intergenic 50.0%
TGGGTGGAAGTTGGATGCAA+AGG - tig0024351:38273-38292 Msa1416440:intron 50.0%
AACCGGTTACTCAGTTGGCA+TGG - tig0024351:38306-38325 Msa1416440:intron 50.0%
CGGCCTACACTTAGTATCTC+TGG + tig0024351:38336-38355 None:intergenic 50.0%
CCACAGTTCCTAGAGATGTC+CGG + tig0024351:38356-38375 None:intergenic 50.0%
! CATAATCTGCAGTGGGCTCA+GGG - tig0024351:38416-38435 Msa1416440:intron 50.0%
ATTTCCGACCGACTGGATTC+TGG + tig0024351:38668-38687 None:intergenic 50.0%
ATCAGACATTTCCGACCGAC+TGG + tig0024351:38675-38694 None:intergenic 50.0%
ATGAAGGCCCGTCTACATCA+GGG - tig0024351:39041-39060 Msa1416440:CDS 50.0%
CCGTCTACATCAGGGGAAAA+TGG - tig0024351:39049-39068 Msa1416440:CDS 50.0%
! TCAGGGGAAAATGGAAGCAC+TGG - tig0024351:39058-39077 Msa1416440:CDS 50.0%
!! CAGGGGAAAATGGAAGCACT+GGG - tig0024351:39059-39078 Msa1416440:CDS 50.0%
AACAGCTTCGTGCTCCTTGT+TGG + tig0024351:39095-39114 None:intergenic 50.0%
! AGAGGCATACATGGAAACGG+CGG - tig0024351:39360-39379 Msa1416440:intron 50.0%
GGAAACGGCGGAGAATAATC+TGG - tig0024351:39372-39391 Msa1416440:intron 50.0%
GCTCTGTCAAGGATGACATG+AGG - tig0024351:39536-39555 Msa1416440:intron 50.0%
TAGTACGCATGGAGCTCGAT+AGG - tig0024351:39584-39603 Msa1416440:intron 50.0%
GGAGCTCGATAGGATTTCAG+AGG - tig0024351:39594-39613 Msa1416440:intron 50.0%
! CCTCTTCAATACTGGTGCTG+TGG + tig0024351:39723-39742 None:intergenic 50.0%
! CCACAGCACCAGTATTGAAG+AGG - tig0024351:39720-39739 Msa1416440:intron 50.0%
TCACCAATACACAGGGAGGA+GGG + tig0024351:39754-39773 None:intergenic 50.0%
TTCACCAATACACAGGGAGG+AGG + tig0024351:39755-39774 None:intergenic 50.0%
ACTGACCCTCTTCAAGAACC+CGG + tig0024351:40510-40529 None:intergenic 50.0%
AAGTGGTTGCCCATGTCACA+TGG - tig0024351:41725-41744 Msa1416440:CDS 50.0%
TGCCCATGTCACATGGTTCA+TGG - tig0024351:41732-41751 Msa1416440:CDS 50.0%
TATTGTGCAGGATCGCCTTC+TGG + tig0024351:41766-41785 None:intergenic 50.0%
! CAGGTTAGAATCGGTTCTGG+AGG + tig0024351:42219-42238 None:intergenic 50.0%
CTCTTGTAGAGGGATTGGAC+GGG + tig0024351:42638-42657 None:intergenic 50.0%
CTCTTCCCCCCAAGAATTAG+AGG - tig0024351:42928-42947 Msa1416440:CDS 50.0%
CAAGCCCTCTAATTCTTGGG+GGG + tig0024351:42936-42955 None:intergenic 50.0%
CCAAGCCCTCTAATTCTTGG+GGG + tig0024351:42937-42956 None:intergenic 50.0%
GCCAAGCCCTCTAATTCTTG+GGG + tig0024351:42938-42957 None:intergenic 50.0%
GGCCAAGCCCTCTAATTCTT+GGG + tig0024351:42939-42958 None:intergenic 50.0%
AGGCCAAGCCCTCTAATTCT+TGG + tig0024351:42940-42959 None:intergenic 50.0%
AGTTGTGGCTGACCATACAC+CGG - tig0024351:43215-43234 Msa1416440:five_prime_UTR 50.0%
! TGGTCGTTTCTTTGGAGGGA+AGG - tig0024351:43549-43568 Msa1416440:five_prime_UTR 50.0%
ACCGTCCCGTGTCCTTTGAT+AGG - tig0024351:36921-36940 Msa1416440:three_prime_UTR 55.0%
GGGGTGGTTATGGGGTTTGA+TGG - tig0024351:37454-37473 Msa1416440:intron 55.0%
GTTTCCACAGCAAGGACAGG+TGG - tig0024351:37888-37907 Msa1416440:intron 55.0%
CACCAGCAAACATGGCACTC+TGG + tig0024351:37920-37939 None:intergenic 55.0%
! GGAACCTGCTGCTTCGTTTG+AGG - tig0024351:37947-37966 Msa1416440:intron 55.0%
GTTCCCTCAAACGAAGCAGC+AGG + tig0024351:37954-37973 None:intergenic 55.0%
TTCAAAGGTCCAGAACCGCG+TGG + tig0024351:38011-38030 None:intergenic 55.0%
!! CGCGGTTCTGGACCTTTGAA+TGG - tig0024351:38011-38030 Msa1416440:intron 55.0%
GAGGCAAAGCCTCTCTCCAA+AGG + tig0024351:38050-38069 None:intergenic 55.0%
TTGGAGAGAGGCTTTGCCTC+AGG - tig0024351:38050-38069 Msa1416440:intron 55.0%
AGGCTTTGCCTCAGGTCCAT+TGG - tig0024351:38058-38077 Msa1416440:intron 55.0%
CATGTCTGGGCCGATAGAGA+AGG - tig0024351:38097-38116 Msa1416440:intron 55.0%
TGTCTGGGCCGATAGAGAAG+GGG - tig0024351:38099-38118 Msa1416440:intron 55.0%
! CGCAAGTGGTGCCGAAAAGT+TGG + tig0024351:38159-38178 None:intergenic 55.0%
AGCACTCCATGGGTGGAAGT+TGG - tig0024351:38264-38283 Msa1416440:intron 55.0%
GGCCATGCCAACTGAGTAAC+CGG + tig0024351:38311-38330 None:intergenic 55.0%
AGTGTAGGCCGGACATCTCT+AGG - tig0024351:38345-38364 Msa1416440:intron 55.0%
! CCGGACATCTCTAGGAACTG+TGG - tig0024351:38353-38372 Msa1416440:intron 55.0%
! GCATAATCTGCAGTGGGCTC+AGG - tig0024351:38415-38434 Msa1416440:intron 55.0%
AGGGAAAGGCCGGTGAAGAT+AGG - tig0024351:38435-38454 Msa1416440:intron 55.0%
GGGAAAGGCCGGTGAAGATA+GGG - tig0024351:38436-38455 Msa1416440:intron 55.0%
!! CCGACTGGATTCTGGAGCAA+CGG + tig0024351:38660-38679 None:intergenic 55.0%
CCGTTGCTCCAGAATCCAGT+CGG - tig0024351:38657-38676 Msa1416440:intron 55.0%
TGCTCCAGAATCCAGTCGGT+CGG - tig0024351:38661-38680 Msa1416440:intron 55.0%
GATGAAGGCCCGTCTACATC+AGG - tig0024351:39040-39059 Msa1416440:CDS 55.0%
TGAAGGCCCGTCTACATCAG+GGG - tig0024351:39042-39061 Msa1416440:CDS 55.0%
ACCAATACACAGGGAGGAGG+GGG + tig0024351:39752-39771 None:intergenic 55.0%
CACCAATACACAGGGAGGAG+GGG + tig0024351:39753-39772 None:intergenic 55.0%
! GTTACCAGAGCATTTGGCGC+CGG - tig0024351:40488-40507 Msa1416440:intron 55.0%
! TTACCAGAGCATTTGGCGCC+GGG - tig0024351:40489-40508 Msa1416440:intron 55.0%
ACTGGTGTGTGCGTGCAATC+TGG - tig0024351:42531-42550 Msa1416440:CDS 55.0%
CCCCCAAGAATTAGAGGGCT+TGG - tig0024351:42934-42953 Msa1416440:CDS 55.0%
TCCACAGCAAGGACAGGTGG+CGG - tig0024351:37891-37910 Msa1416440:intron 60.0%
CCTTTGCAGCCAGTTCCACG+CGG - tig0024351:37993-38012 Msa1416440:intron 60.0%
GTCTGGGCCGATAGAGAAGG+GGG - tig0024351:38100-38119 Msa1416440:intron 60.0%
! TTTTCGGCACCACTTGCGCG+TGG - tig0024351:38161-38180 Msa1416440:intron 60.0%
! TCTGCAGTGGGCTCAGGGAA+AGG - tig0024351:38421-38440 Msa1416440:intron 60.0%
TCCCCCTCCTCCCTGTGTAT+TGG - tig0024351:39748-39767 Msa1416440:intron 60.0%
! TTGGCGCCGGGTTCTTGAAG+AGG - tig0024351:40501-40520 Msa1416440:intron 60.0%
! TGGCGCCGGGTTCTTGAAGA+GGG - tig0024351:40502-40521 Msa1416440:intron 60.0%
GGCTGACCATACACCGGAGT+AGG - tig0024351:43221-43240 Msa1416440:five_prime_UTR 60.0%
ACCGCCACCTGTCCTTGCTG+TGG + tig0024351:37895-37914 None:intergenic 65.0%
CCGCGTGGAACTGGCTGCAA+AGG + tig0024351:37996-38015 None:intergenic 65.0%
CAGCCAGTTCCACGCGGTTC+TGG - tig0024351:37999-38018 Msa1416440:intron 65.0%
GGTCCAGAACCGCGTGGAAC+TGG + tig0024351:38005-38024 None:intergenic 65.0%
CACCACTTGCGCGTGGTCGT+AGG - tig0024351:38168-38187 Msa1416440:intron 65.0%
CTCCTACGACCACGCGCAAG+TGG + tig0024351:38173-38192 None:intergenic 65.0%
CACTTGCGCGTGGTCGTAGG+AGG - tig0024351:38171-38190 Msa1416440:intron 65.0%
! CAGTGGGCTCAGGGAAAGGC+CGG - tig0024351:38425-38444 Msa1416440:intron 65.0%
GAACCCGGCGCCAAATGCTC+TGG + tig0024351:40495-40514 None:intergenic 65.0%
TGTGAGTATGCGCGCGCGTG+TGG + tig0024351:42471-42490 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
tig0024351 gene 36897 43845 36897 ID=Msa1416440;Name=Msa1416440
tig0024351 mRNA 36897 43845 36897 ID=Msa1416440-mRNA-1;Parent=Msa1416440;Name=Msa1416440-mRNA-1;_AED=0.04;_eAED=0.04;_QI=661|1|1|1|1|1|4|253|892
tig0024351 exon 36897 37265 36897 ID=Msa1416440-mRNA-1:exon:22944;Parent=Msa1416440-mRNA-1
tig0024351 exon 38916 39180 38916 ID=Msa1416440-mRNA-1:exon:22943;Parent=Msa1416440-mRNA-1
tig0024351 exon 40219 40332 40219 ID=Msa1416440-mRNA-1:exon:22942;Parent=Msa1416440-mRNA-1
tig0024351 exon 41001 43845 41001 ID=Msa1416440-mRNA-1:exon:22941;Parent=Msa1416440-mRNA-1
tig0024351 five_prime_UTR 43185 43845 43185 ID=Msa1416440-mRNA-1:five_prime_utr;Parent=Msa1416440-mRNA-1
tig0024351 CDS 41001 43184 41001 ID=Msa1416440-mRNA-1:cds;Parent=Msa1416440-mRNA-1
tig0024351 CDS 40219 40332 40219 ID=Msa1416440-mRNA-1:cds;Parent=Msa1416440-mRNA-1
tig0024351 CDS 38916 39180 38916 ID=Msa1416440-mRNA-1:cds;Parent=Msa1416440-mRNA-1
tig0024351 CDS 37150 37265 37150 ID=Msa1416440-mRNA-1:cds;Parent=Msa1416440-mRNA-1
tig0024351 three_prime_UTR 36897 37149 36897 ID=Msa1416440-mRNA-1:three_prime_utr;Parent=Msa1416440-mRNA-1
Gene Sequence

>Msa1416440

ATGGGTAACGGCACTTCTCGTGTTGTTGGTTGTTTAGTGCCATTCAATGGTAAAAATGGTGTTGATTTGGAGTTTTTAGAGCCATTAGATGAAGGTTTAGGACATTCTTTTTGTTATGTGAGACCAACTATGTTTGAATCTCCTGCTATTAGTCCATCGAATTCTGAGAGGTTTACCGTTGATTCAAGCACTCTTGATTCTGAAACCTTGAGTGGTTCGTTTAGGCATGATAGTATGGAGCATTCTAATTCTTCTGGTTTACACAAGCAGGGTAAGAATTTCCCTGAAACTACGTTTAAGACGATTTCAGGGGCTTCTGTTAGTGCCAATGTTTCCACAGCAAGGACAGGTGGCGGTAACCAGAGTGCCATGTTTGCTGGTGATTTCTTGGAACCTGCTGCTTCGTTTGAGGGAACTGCTTCGTTTGCTGCAATTCCTTTGCAGCCAGTTCCACGCGGTTCTGGACCTTTGAATGGTTTTATGTCTGGTCCTTTGGAGAGAGGCTTTGCCTCAGGTCCATTGGATAGAAGTGGTGGTTTCATGTCTGGGCCGATAGAGAAGGGGGTTATGTCAGGTCCTCTTGATGACACTGATAAATCCAACTTTTCGGCACCACTTGCGCGTGGTCGTAGGAGGCCGCGTCTACAACATCTCATGAGAAGTGTTAGTGGACCGGTGAAGAACACGTTTTCTCGAACATTCTCTAAGCACTCCATGGGTGGAAGTTGGATGCAAAGGTTGTTCTTTCAACCGGTTACTCAGTTGGCATGGCCTTCCAGAGATACTAAGTGTAGGCCGGACATCTCTAGGAACTGTGGTATTGATGTTGTACCGTATGAAGCTGAGTATAAACACACGCATAATCTGCAGTGGGCTCAGGGAAAGGCCGGTGAAGATAGGGTTCATGTAGTTCTTTCTGAAGAACAAGGGTGGTTGTTTATTGGGATATATGACGGTTTTAGTGGACCAGATGCACCTGATTTTTTGATGAGCCATCTTTATAGATTTCTAGACAAAGAATTGGAAGGTTTACTTTGGGATTATGAAGATAATCCTGTAGATTCCCTTAAACCCGAAGTCCCTGAAACTTTAAAAGCTACCGTTGCTCCAGAATCCAGTCGGTCGGAAATGTCTGATACTCATACTAATTCTAATCAAGAATGTTTTGAAGCTTGTTCTGGTCCTGAATTAATCAAGGATCAATCATTTAACAATGAGATAGTTGAGGAAAAGGCTGAAGTTAATGTAAATGTTGAACACCAGTTATCTAATTGTGGAAGTAGCTTGTCTACTGTTTCTAATTCTGTTCAACATGAAAAGTTGACTGGAAAAGGTAAAAGAAGTTTAAGGCTTTATGAGCTACTTCAAATGGAATCTTGGGATGATCAATGTAATGATTCCTCAGTTCCGATGGAGTCAATACTAGATGAGCATACAAGACCTTGCTCGTCTACTGTAAGAGAAGATGGCTCTAAACATCAGGATGAAGGCCCGTCTACATCAGGGGAAAATGGAAGCACTGGGTTTGGTTCAACCAACAAGGAGCACGAAGCTGTTTTTCCTGCTTCTGTATCAAGGCAGAATTCAAAAAAGTCATTTATCGGTGCAAAAATTAAAAAAATGTACAGGAAGCCAAAGTCCTTGTGTAAGAAACTCTTTCCTTGGAGTTATGATTGGCATAGGGAAGAAAGTAGTGTTGATGAGAAAATATTAGAAGCCTCTGGACCTATTAGAAAATGCAGGTCTGGAGTAGATCATAACGCAGTTTTAACAGCAATGGCTCGAGCTCTTGAAAGAACAGAAGAGGCATACATGGAAACGGCGGAGAATAATCTGGACAAAAATCCAGAACTTGCTATAATGGGGTCATGTGTTCTAGTGATGTTGATGAAGGATCAAGATGTTTATGTCATGAATCTGGGAGATAGTCGTGTGATTTTGGCTCAAGAAAGATCAAACGATCGCCATCCTAATTCAAGCTCTGTCAAGGATGACATGAGGCATAGAAATAGATCTAGAGAGTCATTAGTACGCATGGAGCTCGATAGGATTTCAGAGGAGTCTCCAATTCACAACCATAACAATCATGTTATCAAGATGAATAAAAACCGCGAGATATCATTTTGCAAATTAAAAATGAGGGCTCTGCAGCTTTCTACAGACCACAGCACCAGTATTGAAGAGGAAGTTTCAAGAATAAGAGCAGAACACCCTGATGATAGTCAGGCCATATTGAATGATCGAGTGAAAGGAAATTTAAAAGTTACCAGAGCATTTGGCGCCGGGTTCTTGAAGAGGCCGTCTTTTAACGAAGCTCTACTCGAGGTGTTTCAAGTTAAATATATCGGCTCTGCTCCTTACCTAAGTTGCACTCCTTCTGTACTTCACCATCGACTTTCTTCAAGTGACCGATTCTTGGTACTCTCCTCTGATGGGCTTTACCAATATTTCAGCAATGAAGAAGTGGTTGCCCATGTCACATGGTTCATGGAAAATGTTCCAGAAGGCGATCCTGCACAATACCTTATTGCAGAGCTTCTCTTCTGCGCTGCTAAAAAGAATGGAATGGATTTTCATGAACTGCTTGATATTCCTCATGGAGATCGGCGTAAATATCACGATGATGTATCTGTCATGGTCGTTTCTTTGGAGGGAAGGATTTGGAGATCATCGGGATAA
Protein sequence

>Msa1416440

MGNGTSRVVGCLVPFNGKNGVDLEFLEPLDEGLGHSFCYVRPTMFESPAISPSNSERFTVDSSTLDSETLSGSFRHDSMEHSNSSGLHKQGKNFPETTFKTISGASVSANVSTARTGGGNQSAMFAGDFLEPAASFEGTASFAAIPLQPVPRGSGPLNGFMSGPLERGFASGPLDRSGGFMSGPIEKGVMSGPLDDTDKSNFSAPLARGRRRPRLQHLMRSVSGPVKNTFSRTFSKHSMGGSWMQRLFFQPVTQLAWPSRDTKCRPDISRNCGIDVVPYEAEYKHTHNLQWAQGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYRFLDKELEGLLWDYEDNPVDSLKPEVPETLKATVAPESSRSEMSDTHTNSNQECFEACSGPELIKDQSFNNEIVEEKAEVNVNVEHQLSNCGSSLSTVSNSVQHEKLTGKGKRSLRLYELLQMESWDDQCNDSSVPMESILDEHTRPCSSTVREDGSKHQDEGPSTSGENGSTGFGSTNKEHEAVFPASVSRQNSKKSFIGAKIKKMYRKPKSLCKKLFPWSYDWHREESSVDEKILEASGPIRKCRSGVDHNAVLTAMARALERTEEAYMETAENNLDKNPELAIMGSCVLVMLMKDQDVYVMNLGDSRVILAQERSNDRHPNSSSVKDDMRHRNRSRESLVRMELDRISEESPIHNHNNHVIKMNKNREISFCKLKMRALQLSTDHSTSIEEEVSRIRAEHPDDSQAILNDRVKGNLKVTRAFGAGFLKRPSFNEALLEVFQVKYIGSAPYLSCTPSVLHHRLSSSDRFLVLSSDGLYQYFSNEEVVAHVTWFMENVPEGDPAQYLIAELLFCAAKKNGMDFHELLDIPHGDRRKYHDDVSVMVVSLEGRIWRSSG*