AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1412730

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1412730 MtrunA17_Chr1g0193691 98.318 892 15 0 1 892 1 892 0.0 1825
Msa1412730 MtrunA17_Chr4g0054811 58.769 325 119 4 573 892 462 776 2.30e-114 367
Msa1412730 MtrunA17_Chr4g0054811 38.636 396 135 17 1 358 1 326 8.77e-53 197
Msa1412730 MtrunA17_Chr4g0031521 52.522 337 133 4 555 890 392 702 5.27e-109 351
Msa1412730 MtrunA17_Chr4g0031521 38.108 370 157 11 1 347 1 321 1.43e-56 207
Msa1412730 MtrunA17_Chr7g0238501 45.902 305 104 3 586 890 310 553 2.89e-79 267
Msa1412730 MtrunA17_Chr7g0238501 26.394 269 158 7 98 355 66 305 9.07e-17 84.7
Msa1412730 MtrunA17_Chr4g0039061 45.902 305 106 5 587 891 245 490 2.30e-74 252
Msa1412730 MtrunA17_Chr4g0039061 45.238 84 44 1 286 367 175 258 6.48e-18 87.8
Msa1412730 MtrunA17_Chr4g0067301 35.932 295 138 2 589 883 244 487 4.39e-56 201
Msa1412730 MtrunA17_Chr4g0067301 54.098 61 28 0 289 349 140 200 2.91e-12 70.1
Msa1412730 MtrunA17_Chr2g0295991 47.674 172 90 0 712 883 305 476 1.04e-47 177
Msa1412730 MtrunA17_Chr2g0295991 50.746 67 33 0 289 355 142 208 2.01e-13 73.9
Msa1412730 MtrunA17_Chr1g0213351 28.188 298 149 5 592 884 118 355 5.99e-33 131
Msa1412730 MtrunA17_Chr1g0207571 29.412 306 153 5 592 892 99 346 1.42e-31 127
Msa1412730 MtrunA17_Chr7g0263281 28.904 301 149 5 592 887 109 349 1.38e-29 121
Msa1412730 MtrunA17_Chr1g0181901 26.970 330 147 6 592 887 114 383 2.42e-29 121
Msa1412730 MtrunA17_Chr7g0250061 35.393 178 106 3 715 887 181 354 1.50e-26 112
Msa1412730 MtrunA17_Chr8g0371321 35.393 178 106 3 715 887 184 357 6.63e-26 111
Msa1412730 MtrunA17_Chr1g0211251 38.202 178 101 3 715 887 186 359 7.53e-26 110
Msa1412730 MtrunA17_Chr3g0089691 33.005 203 116 6 696 884 65 261 1.25e-22 99.8
Msa1412730 MtrunA17_Chr7g0223641 39.231 130 71 2 762 883 67 196 2.19e-22 96.3
Msa1412730 MtrunA17_Chr3g0089711 33.005 203 116 6 696 884 151 347 4.89e-22 99.0
Msa1412730 MtrunA17_Chr3g0089721 33.005 203 116 6 696 884 151 347 9.00e-22 98.2
Msa1412730 MtrunA17_Chr1g0175381 31.461 178 113 3 712 884 180 353 1.04e-21 98.6
Msa1412730 MtrunA17_Chr2g0294291 33.333 174 107 3 715 883 181 350 2.73e-21 97.1
Msa1412730 MtrunA17_Chr7g0256751 31.500 200 117 6 696 881 152 345 1.69e-17 86.3
Msa1412730 MtrunA17_Chr7g0256771 32.374 139 86 3 696 826 153 291 1.59e-13 72.8
Msa1412730 MtrunA17_Chr4g0063051 28.652 178 98 5 713 888 163 313 8.28e-13 70.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1412730 AT2G46920.3 62.959 899 271 16 1 892 1 844 0.0 1081
Msa1412730 AT2G46920.1 62.959 899 271 16 1 892 1 844 0.0 1081
Msa1412730 AT2G46920.2 62.959 899 271 16 1 892 1 844 0.0 1081
Msa1412730 AT2G46920.4 62.959 899 271 16 1 892 1 844 0.0 1081
Msa1412730 AT1G07630.1 53.824 340 126 6 555 890 348 660 3.73e-114 364
Msa1412730 AT1G07630.1 39.730 370 145 13 1 347 1 315 1.91e-62 224
Msa1412730 AT2G35350.1 50.131 383 168 8 517 892 414 780 9.17e-109 353
Msa1412730 AT2G35350.1 38.227 361 129 14 25 354 37 334 6.76e-47 180
Msa1412730 AT2G28890.1 55.960 302 110 3 589 890 374 652 8.76e-108 347
Msa1412730 AT2G28890.1 42.033 364 139 13 1 347 1 309 8.13e-64 228
Msa1412730 AT5G02400.1 55.844 308 110 5 584 891 392 673 7.13e-106 342
Msa1412730 AT5G02400.1 36.628 344 132 11 31 349 31 313 1.33e-47 181
Msa1412730 AT3G09400.1 56.209 306 101 5 586 891 377 649 5.69e-105 339
Msa1412730 AT3G09400.1 33.060 366 163 12 1 346 1 304 9.49e-39 154
Msa1412730 AT3G09400.2 52.222 270 96 5 586 855 377 613 4.45e-79 270
Msa1412730 AT3G09400.2 33.060 366 163 12 1 346 1 304 6.88e-39 154
Msa1412730 AT3G16560.1 43.023 172 98 0 712 883 309 480 3.11e-45 171
Msa1412730 AT3G16560.4 43.023 172 98 0 712 883 309 480 3.11e-45 171
Msa1412730 AT3G16560.2 43.023 172 98 0 712 883 309 480 3.11e-45 171
Msa1412730 AT3G16560.3 41.667 144 84 0 712 855 309 452 1.54e-33 135
Msa1412730 AT4G38520.2 29.831 295 142 5 592 881 119 353 8.57e-33 132
Msa1412730 AT4G38520.1 29.831 295 142 5 592 881 119 353 8.57e-33 132
Msa1412730 AT3G12620.2 28.165 316 161 6 577 887 107 361 6.24e-31 126
Msa1412730 AT3G12620.1 28.165 316 161 6 577 887 107 361 6.24e-31 126
Msa1412730 AT5G06750.2 26.578 301 159 4 592 887 38 281 8.86e-29 118
Msa1412730 AT5G06750.3 26.578 301 159 4 592 887 120 363 3.36e-28 118
Msa1412730 AT5G06750.1 26.578 301 159 4 592 887 120 363 3.36e-28 118
Msa1412730 AT3G55050.1 37.288 177 102 3 712 883 186 358 1.09e-27 116
Msa1412730 AT3G55050.2 37.288 177 102 3 712 883 186 358 1.09e-27 116
Msa1412730 AT3G51370.2 35.429 175 104 3 715 884 99 269 6.58e-27 112
Msa1412730 AT5G66080.2 37.079 178 103 3 712 884 80 253 1.31e-26 110
Msa1412730 AT3G17090.1 36.364 176 103 3 713 883 187 358 3.72e-26 112
Msa1412730 AT3G51370.1 35.429 175 104 3 715 884 184 354 5.38e-26 111
Msa1412730 AT3G51370.3 35.429 175 104 3 715 884 184 354 5.38e-26 111
Msa1412730 AT5G66080.1 37.079 178 103 3 712 884 184 357 1.34e-25 110
Msa1412730 AT5G02760.1 39.205 176 98 3 713 883 173 344 5.12e-24 105
Msa1412730 AT4G33920.3 34.286 175 106 3 715 884 56 226 3.78e-23 100
Msa1412730 AT4G33920.2 34.286 175 106 3 715 884 86 256 7.04e-23 100
Msa1412730 AT4G33920.1 34.286 175 106 3 715 884 169 339 2.98e-22 100
Msa1412730 AT3G17090.2 37.069 116 68 2 713 823 187 302 2.87e-17 84.3

Find 273 sgRNAs with CRISPR-Local

Find 524 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTAAGAGCTTTCTTATTTA+TGG 0.115163 tig0023943:+47015 None:intergenic
TCTCTTTCTTTCTTCTTTCT+TGG 0.148286 tig0023943:+53902 None:intergenic
TTTCAGGGACTTCGGGTTTA+AGG 0.173499 tig0023943:+52188 None:intergenic
ATCAAGACAATATGCAAATA+TGG 0.178352 tig0023943:+47149 None:intergenic
CTTCTTCATTGCTGAAATAT+TGG 0.212752 tig0023943:+49103 None:intergenic
CATGTTTGCTGGTGATTTCT+TGG 0.218670 tig0023943:-52884 Msa1412730:CDS
AAATCCAGAACTTGCTATAA+TGG 0.219054 tig0023943:-51411 Msa1412730:CDS
AATAATAATAATTGGAGATT+TGG 0.224260 tig0023943:+53826 None:intergenic
ACTACGTTTAAGACGATTTC+AGG 0.226435 tig0023943:-52964 Msa1412730:CDS
CAGCCAGTTCCACGCGGTTC+TGG 0.228026 tig0023943:-52811 Msa1412730:CDS
GATTGATCCTTGATTAATTC+AGG 0.235778 tig0023943:+52070 None:intergenic
GAACAAGGGTGGTTGTTTAT+TGG 0.236233 tig0023943:-52331 Msa1412730:CDS
GGGAGATAGTCGTGTGATTT+TGG 0.243703 tig0023943:-51333 Msa1412730:CDS
GATTTCTAAAATCAATTTAC+TGG 0.245549 tig0023943:+47109 None:intergenic
GAGTAATAATGGGGTGGTTA+TGG 0.255294 tig0023943:-53366 Msa1412730:five_prime_UTR
GAAAAGGTAAAAGAAGTTTA+AGG 0.257265 tig0023943:-51925 Msa1412730:CDS
ATCTGTCATGGTCGTTTCTT+TGG 0.260064 tig0023943:-47265 Msa1412730:CDS
AACAAGGGTGGTTGTTTATT+GGG 0.261849 tig0023943:-52330 Msa1412730:CDS
CTCTTTCTTTCTTCTTTCTT+GGG 0.265047 tig0023943:+53903 None:intergenic
GGGTAAATTCAAAACAAATT+AGG 0.279468 tig0023943:+47037 None:intergenic
CATGGTCAAGTGAGTAATAA+TGG 0.297271 tig0023943:-53377 Msa1412730:five_prime_UTR
ATCGTCTTAAACGTAGTTTC+AGG 0.297907 tig0023943:+52970 None:intergenic
ATGGAGCATTCTAATTCTTC+TGG 0.301105 tig0023943:-53018 Msa1412730:CDS
AGTAATAATGGGGTGGTTAT+GGG 0.306325 tig0023943:-53365 Msa1412730:five_prime_UTR
TTCTTCAAGTGACCGATTCT+TGG 0.307365 tig0023943:-49148 Msa1412730:CDS
GGGGTGGTTATGGGGTTTGA+TGG 0.308122 tig0023943:-53356 Msa1412730:five_prime_UTR
AATCCAGAACTTGCTATAAT+GGG 0.309261 tig0023943:-51410 Msa1412730:CDS
TTAACAGAGAAGCACTTAAA+AGG 0.310457 tig0023943:+47189 None:intergenic
TTAAGAGCTTTCTTATTTAT+GGG 0.310990 tig0023943:+47016 None:intergenic
AGAAGTGGTGGTTTCATGTC+TGG 0.317726 tig0023943:-52727 Msa1412730:CDS
TTAAAAGTTACCAGAGCATT+TGG 0.331448 tig0023943:-50328 Msa1412730:CDS
AGCTACTTCAAATGGAATCT+TGG 0.332616 tig0023943:-51895 Msa1412730:CDS
TATTGTGCAGGATCGCCTTC+TGG 0.333824 tig0023943:+49045 None:intergenic
ATTAAACAATAACCTTGAAA+TGG 0.336830 tig0023943:-53604 Msa1412730:five_prime_UTR
TCTTGATATTGAAACAATCT+TGG 0.339496 tig0023943:-47133 Msa1412730:three_prime_UTR
CGCGGTTCTGGACCTTTGAA+TGG 0.340155 tig0023943:-52799 Msa1412730:CDS
TTTCTTTGGAGGGAAGGATT+TGG 0.340333 tig0023943:-47251 Msa1412730:CDS
TTTCACTCGATCATTCAATA+TGG 0.340343 tig0023943:+50357 None:intergenic
AGGTTATTGTTTAATTTGAT+TGG 0.342556 tig0023943:+53612 None:intergenic
AGATGTTTATGTCATGAATC+TGG 0.343955 tig0023943:-51354 Msa1412730:CDS
GAGCCATTAGATGAAGGTTT+AGG 0.346607 tig0023943:-53174 Msa1412730:CDS
GACCCCATTATAGCAAGTTC+TGG 0.349623 tig0023943:+51407 None:intergenic
TCCTTTGATCTGACCCTTTG+AGG 0.354335 tig0023943:-53500 Msa1412730:five_prime_UTR
AGGGAAAGGCCGGTGAAGAT+AGG 0.358505 tig0023943:-52375 Msa1412730:CDS
GAAAATGGAAGCACTGGGTT+TGG 0.360276 tig0023943:-51746 Msa1412730:CDS
TCAAGACAATATGCAAATAT+GGG 0.366055 tig0023943:+47150 None:intergenic
TTCAGGGACTTCGGGTTTAA+GGG 0.372236 tig0023943:+52189 None:intergenic
CCGTCTACATCAGGGGAAAA+TGG 0.373824 tig0023943:-51761 Msa1412730:CDS
TCTTTCCTTGGAGTTATGAT+TGG 0.374905 tig0023943:-51598 Msa1412730:CDS
ATTTCCGACCGACTGGATTC+TGG 0.375849 tig0023943:+52145 None:intergenic
TTTAAAGTTTCAGGGACTTC+GGG 0.377366 tig0023943:+52181 None:intergenic
TTTGTATTTGTATTTGTTGA+GGG 0.384181 tig0023943:-53309 Msa1412730:five_prime_UTR
TAGATTTCTAGACAAAGAAT+TGG 0.384327 tig0023943:-52251 Msa1412730:CDS
AACAGCTTCGTGCTCCTTGT+TGG 0.386048 tig0023943:+51718 None:intergenic
GTGTTTCAAGTTAAATATAT+CGG 0.387374 tig0023943:-49219 Msa1412730:CDS
GAACCTGCTGCTTCGTTTGA+GGG 0.388487 tig0023943:-52862 Msa1412730:CDS
TACTTCCACAATTAGATAAC+TGG 0.389161 tig0023943:+51993 None:intergenic
GGTCCAGAACCGCGTGGAAC+TGG 0.389417 tig0023943:+52808 None:intergenic
TTCTTCTGGTTTACACAAGC+AGG 0.391131 tig0023943:-53004 Msa1412730:CDS
AAACCTTGAGTGGTTCGTTT+AGG 0.394527 tig0023943:-53050 Msa1412730:CDS
TCCTTGACAGAGCTTGAATT+AGG 0.400913 tig0023943:+51284 None:intergenic
AGAAGAGAAGCTCTGCAATA+AGG 0.401305 tig0023943:+49022 None:intergenic
GGAACCTGCTGCTTCGTTTG+AGG 0.404499 tig0023943:-52863 Msa1412730:CDS
CATGAAAAGTTGACTGGAAA+AGG 0.405025 tig0023943:-51941 Msa1412730:CDS
TTGGAGAGAGGCTTTGCCTC+AGG 0.406640 tig0023943:-52760 Msa1412730:CDS
GCATAATCTGCAGTGGGCTC+AGG 0.409987 tig0023943:-52395 Msa1412730:CDS
AACGGCACTTCTCGTGTTGT+TGG 0.410651 tig0023943:-53246 Msa1412730:CDS
GGCCATGCCAACTGAGTAAC+CGG 0.412628 tig0023943:+52502 None:intergenic
TGTCCTAAACCTTCATCTAA+TGG 0.414208 tig0023943:+53171 None:intergenic
AAGAATTGGAAGGTTTACTT+TGG 0.414277 tig0023943:-52237 Msa1412730:CDS
GCAAAGGTTGTTCTTTCAAC+CGG 0.415006 tig0023943:-52521 Msa1412730:CDS
TCTTGATAACATGATTGTTA+TGG 0.415311 tig0023943:+51177 None:intergenic
CGGCCTACACTTAGTATCTC+TGG 0.415577 tig0023943:+52477 None:intergenic
GCTTTATGAGCTACTTCAAA+TGG 0.418404 tig0023943:-51903 Msa1412730:CDS
TGATTGTTATGGTTGTGAAT+TGG 0.419136 tig0023943:+51188 None:intergenic
GATGAAGGCCCGTCTACATC+AGG 0.424284 tig0023943:-51770 Msa1412730:CDS
GGGTGGTTATGGGGTTTGAT+GGG 0.424314 tig0023943:-53355 Msa1412730:five_prime_UTR
CTTGATATTGAAACAATCTT+GGG 0.428125 tig0023943:-47132 Msa1412730:three_prime_UTR
TTAAACAATAACCTTGAAAT+GGG 0.428739 tig0023943:-53603 Msa1412730:five_prime_UTR
AGAATTGGAAGGTTTACTTT+GGG 0.429016 tig0023943:-52236 Msa1412730:CDS
AAAACACTCTTTACCTCAAA+GGG 0.430978 tig0023943:+53487 None:intergenic
CAATGAGATAGTTGAGGAAA+AGG 0.433095 tig0023943:-52041 Msa1412730:CDS
TGTGTAAGAAACTCTTTCCT+TGG 0.434759 tig0023943:-51610 Msa1412730:CDS
CCTATTAGAAAATGCAGGTC+TGG 0.442699 tig0023943:-51527 Msa1412730:CDS
TTCGTTTAGGCATGATAGTA+TGG 0.443765 tig0023943:-53037 Msa1412730:CDS
CGCAAGTGGTGCCGAAAAGT+TGG 0.445340 tig0023943:+52654 None:intergenic
GCTACTTCAAATGGAATCTT+GGG 0.449531 tig0023943:-51894 Msa1412730:CDS
TTCTTGGTACTCTCCTCTGA+TGG 0.453141 tig0023943:-49132 Msa1412730:CDS
AATATGGCCTGACTATCATC+AGG 0.454667 tig0023943:+50373 None:intergenic
TGTCATGGTCGTTTCTTTGG+AGG 0.454997 tig0023943:-47262 Msa1412730:CDS
TTGTTTAATTTGATTGGTGA+TGG 0.456228 tig0023943:+53618 None:intergenic
GGAAACGGCGGAGAATAATC+TGG 0.457804 tig0023943:-51438 Msa1412730:CDS
AACCAGAGTGCCATGTTTGC+TGG 0.458335 tig0023943:-52895 Msa1412730:CDS
AAACACAAGGGCAGCAGTAA+AGG 0.460107 tig0023943:+46984 None:intergenic
AGGCTTTGCCTCAGGTCCAT+TGG 0.460532 tig0023943:-52752 Msa1412730:CDS
CATCTCATGAGAAGTGTTAG+TGG 0.460965 tig0023943:-52604 Msa1412730:CDS
TTCTGGTCCTGAATTAATCA+AGG 0.463926 tig0023943:-52077 Msa1412730:CDS
ATCAGACATTTCCGACCGAC+TGG 0.465386 tig0023943:+52138 None:intergenic
TTACCAGAGCATTTGGCGCC+GGG 0.466068 tig0023943:-50321 Msa1412730:CDS
CGAGAAAACGTGTTCTTCAC+CGG 0.469877 tig0023943:+52580 None:intergenic
CTTGGAGTTATGATTGGCAT+AGG 0.472134 tig0023943:-51592 Msa1412730:CDS
TGCCCATGTCACATGGTTCA+TGG 0.473613 tig0023943:-49076 Msa1412730:CDS
GTTTATGTCTCAATGATTCA+AGG 0.473669 tig0023943:-53671 Msa1412730:five_prime_UTR
GGAACATACCTCTTCAATAC+TGG 0.475850 tig0023943:+51082 None:intergenic
ACAAGTAGGTTGAAGGGGAC+AGG 0.476334 tig0023943:+53694 None:intergenic
CTACGTTTAAGACGATTTCA+GGG 0.478288 tig0023943:-52963 Msa1412730:CDS
TCAGGGGAAAATGGAAGCAC+TGG 0.478893 tig0023943:-51752 Msa1412730:CDS
AGAACACCCTGATGATAGTC+AGG 0.480584 tig0023943:-50380 Msa1412730:CDS
GTTTGTATTTGTATTTGTTG+AGG 0.480678 tig0023943:-53310 Msa1412730:five_prime_UTR
TTGTTTATTGGGATATATGA+CGG 0.481266 tig0023943:-52319 Msa1412730:CDS
AGTTTCTTACACAAGGACTT+TGG 0.483606 tig0023943:+51620 None:intergenic
ATGGTCAAGTGAGTAATAAT+GGG 0.484486 tig0023943:-53376 Msa1412730:five_prime_UTR
TCTTGGTACTCTCCTCTGAT+GGG 0.485583 tig0023943:-49131 Msa1412730:CDS
GAGAAAATATTAGAAGCCTC+TGG 0.488265 tig0023943:-51551 Msa1412730:CDS
GTTCAGCATGAAAAGTTGAC+TGG 0.489154 tig0023943:-51947 Msa1412730:CDS
AGAAGATGGCTCTAAACATC+AGG 0.492537 tig0023943:-51792 Msa1412730:CDS
TCGTCTTAAACGTAGTTTCA+GGG 0.494913 tig0023943:+52971 None:intergenic
GTACAGAAGGAGTGCAACTT+AGG 0.495852 tig0023943:+49184 None:intergenic
CATAAACACAAGTAGGTTGA+AGG 0.496059 tig0023943:+53687 None:intergenic
CCGCGTGGAACTGGCTGCAA+AGG 0.496825 tig0023943:+52817 None:intergenic
GGAAGGATTTGGAGATCATC+GGG 0.497013 tig0023943:-47240 Msa1412730:CDS
TTTAATTTGATTGGTGATGG+TGG 0.497367 tig0023943:+53621 None:intergenic
AAGAACAGAAGAGGCATACA+TGG 0.499922 tig0023943:-51459 Msa1412730:CDS
CTTTCAACCGGTTACTCAGT+TGG 0.503085 tig0023943:-52509 Msa1412730:CDS
GTCATGGTCGTTTCTTTGGA+GGG 0.503413 tig0023943:-47261 Msa1412730:CDS
GAAGTGGTGGTTTCATGTCT+GGG 0.504538 tig0023943:-52726 Msa1412730:CDS
ATGTCTGGTCCTTTGGAGAG+AGG 0.507990 tig0023943:-52772 Msa1412730:CDS
GAACCCGGCGCCAAATGCTC+TGG 0.508085 tig0023943:+50318 None:intergenic
AACATTCTCTAAGCACTCCA+TGG 0.508300 tig0023943:-52557 Msa1412730:CDS
ATCAAGAGTGCTTGAATCAA+CGG 0.509625 tig0023943:+53077 None:intergenic
GATGTTTATGTCATGAATCT+GGG 0.511586 tig0023943:-51353 Msa1412730:CDS
GTTACCAGAGCATTTGGCGC+CGG 0.513331 tig0023943:-50322 Msa1412730:CDS
TGGTCGTTTCTTTGGAGGGA+AGG 0.514079 tig0023943:-47257 Msa1412730:CDS
GTAATAATGGGGTGGTTATG+GGG 0.514967 tig0023943:-53364 Msa1412730:five_prime_UTR
AGCACTCCATGGGTGGAAGT+TGG 0.516622 tig0023943:-52546 Msa1412730:CDS
TGTCTAGAAATCTATAAAGA+TGG 0.517327 tig0023943:+52260 None:intergenic
TCGTCTACTGTAAGAGAAGA+TGG 0.519430 tig0023943:-51806 Msa1412730:CDS
TCGGGTTTAAGGGAATCTAC+AGG 0.519852 tig0023943:+52199 None:intergenic
GCAGGAGATTCAAACATAGT+TGG 0.520083 tig0023943:+53129 None:intergenic
AGTGTAGGCCGGACATCTCT+AGG 0.520773 tig0023943:-52465 Msa1412730:CDS
TTCTGCCTTGATACAGAAGC+AGG 0.522225 tig0023943:+51692 None:intergenic
TTGATATTCCTCATGGAGAT+CGG 0.526663 tig0023943:-47308 Msa1412730:CDS
TGGCGCCGGGTTCTTGAAGA+GGG 0.527058 tig0023943:-50308 Msa1412730:intron
TCAAAACAAATTAGGACTGG+TGG 0.527155 tig0023943:+47045 None:intergenic
GGGAAAGGCCGGTGAAGATA+GGG 0.528809 tig0023943:-52374 Msa1412730:CDS
GGTTGTTTAGTGCCATTCAA+TGG 0.531093 tig0023943:-53225 Msa1412730:CDS
CAGTGGGCTCAGGGAAAGGC+CGG 0.533471 tig0023943:-52385 Msa1412730:CDS
CTTGATTCTGAAACCTTGAG+TGG 0.534406 tig0023943:-53060 Msa1412730:CDS
ACCGTCCCGTGTCCTTTGAT+AGG 0.537516 tig0023943:-53880 Msa1412730:five_prime_UTR
TCTGCAGTGGGCTCAGGGAA+AGG 0.538895 tig0023943:-52389 Msa1412730:CDS
TTGGCGCCGGGTTCTTGAAG+AGG 0.539302 tig0023943:-50309 Msa1412730:CDS
TAGAGAGTCATTAGTACGCA+TGG 0.542192 tig0023943:-51237 Msa1412730:CDS
CAGAGGAGAGTACCAAGAAT+CGG 0.545943 tig0023943:+49136 None:intergenic
GGCTCTAAACATCAGGATGA+AGG 0.546035 tig0023943:-51785 Msa1412730:CDS
CCACAGTTCCTAGAGATGTC+CGG 0.547445 tig0023943:+52457 None:intergenic
GGGAAGGATTTGGAGATCAT+CGG 0.548516 tig0023943:-47241 Msa1412730:CDS
CATGTCTGGGCCGATAGAGA+AGG 0.548519 tig0023943:-52713 Msa1412730:CDS
GAATTCGATGGACTAATAGC+AGG 0.549082 tig0023943:+53111 None:intergenic
ACCTCAAAGGGTCAGATCAA+AGG 0.549244 tig0023943:+53499 None:intergenic
ATGTCTGGGCCGATAGAGAA+GGG 0.549805 tig0023943:-52712 Msa1412730:CDS
TCCTAATTCAAGCTCTGTCA+AGG 0.550425 tig0023943:-51285 Msa1412730:CDS
TTTCCATGAACCATGTGACA+TGG 0.550559 tig0023943:+49073 None:intergenic
CAAGAAATCACCAGCAAACA+TGG 0.551763 tig0023943:+52885 None:intergenic
GAACAAAGATTGAGACAAAG+AGG 0.551861 tig0023943:+53743 None:intergenic
GAACTGCTTGATATTCCTCA+TGG 0.552205 tig0023943:-47315 Msa1412730:CDS
TCTTCTGGTTTACACAAGCA+GGG 0.552435 tig0023943:-53003 Msa1412730:CDS
AACCGGTTACTCAGTTGGCA+TGG 0.552985 tig0023943:-52504 Msa1412730:CDS
CTCCTACGACCACGCGCAAG+TGG 0.552988 tig0023943:+52640 None:intergenic
AATGTTTCCACAGCAAGGAC+AGG 0.553085 tig0023943:-52925 Msa1412730:CDS
TACATGAACCCTATCTTCAC+CGG 0.553678 tig0023943:+52366 None:intergenic
CATAATCTGCAGTGGGCTCA+GGG 0.555002 tig0023943:-52394 Msa1412730:CDS
TAAGAGCTTTCTTATTTATG+GGG 0.555187 tig0023943:+47017 None:intergenic
TTTCTAGACAAAGAATTGGA+AGG 0.556075 tig0023943:-52247 Msa1412730:CDS
TTGGAGTTATGATTGGCATA+GGG 0.556902 tig0023943:-51591 Msa1412730:CDS
GAACACCAGTTATCTAATTG+TGG 0.557159 tig0023943:-51998 Msa1412730:CDS
TGACAGAGCTTGAATTAGGA+TGG 0.557579 tig0023943:+51288 None:intergenic
TGTCCTTGCTGTGGAAACAT+TGG 0.558283 tig0023943:+52927 None:intergenic
ATTGAGACATAAACACAAGT+AGG 0.558791 tig0023943:+53680 None:intergenic
CATGAGAAGTGTTAGTGGAC+CGG 0.559099 tig0023943:-52599 Msa1412730:CDS
GAAGGAGTGCAACTTAGGTA+AGG 0.559882 tig0023943:+49189 None:intergenic
TGTTTATACTCAGCTTCATA+CGG 0.562140 tig0023943:+52421 None:intergenic
CAAGACAATATGCAAATATG+GGG 0.562381 tig0023943:+47151 None:intergenic
CCTCTTCAATACTGGTGCTG+TGG 0.563096 tig0023943:+51090 None:intergenic
GTTCCCTCAAACGAAGCAGC+AGG 0.565776 tig0023943:+52859 None:intergenic
TTCTCTAAGCACTCCATGGG+TGG 0.568004 tig0023943:-52553 Msa1412730:CDS
TTGCATCCAACTTCCACCCA+TGG 0.569523 tig0023943:+52540 None:intergenic
AATTCAAAACAAATTAGGAC+TGG 0.569768 tig0023943:+47042 None:intergenic
TAATGATTCCTCAGTTCCGA+TGG 0.572372 tig0023943:-51861 Msa1412730:CDS
AGCTCTTGAAAGAACAGAAG+AGG 0.572536 tig0023943:-51468 Msa1412730:CDS
TAGTACGCATGGAGCTCGAT+AGG 0.574316 tig0023943:-51226 Msa1412730:CDS
AGTCGATGGTGAAGTACAGA+AGG 0.575455 tig0023943:+49171 None:intergenic
TTCCATGAACCATGTGACAT+GGG 0.576524 tig0023943:+49074 None:intergenic
ATATTTCAGCAATGAAGAAG+TGG 0.576694 tig0023943:-49100 Msa1412730:CDS
CTGGACCTATTAGAAAATGC+AGG 0.576782 tig0023943:-51532 Msa1412730:CDS
CACCACTTGCGCGTGGTCGT+AGG 0.578737 tig0023943:-52642 Msa1412730:CDS
AGAAGAGGCATACATGGAAA+CGG 0.579428 tig0023943:-51453 Msa1412730:CDS
TCACGATGATGTATCTGTCA+TGG 0.582123 tig0023943:-47277 Msa1412730:CDS
CACTTGCGCGTGGTCGTAGG+AGG 0.582141 tig0023943:-52639 Msa1412730:CDS
CACCAGCAAACATGGCACTC+TGG 0.582390 tig0023943:+52893 None:intergenic
ATAAACACAAGTAGGTTGAA+GGG 0.583940 tig0023943:+53688 None:intergenic
AAACCACCACTTCTATCCAA+TGG 0.584898 tig0023943:+52736 None:intergenic
ATATTGAATGATCGAGTGAA+AGG 0.587589 tig0023943:-50355 Msa1412730:CDS
GTGCCAATGTTTCCACAGCA+AGG 0.588563 tig0023943:-52930 Msa1412730:CDS
ATGCCTAAACGAACCACTCA+AGG 0.588964 tig0023943:+53047 None:intergenic
CAGAGATACTAAGTGTAGGC+CGG 0.591967 tig0023943:-52476 Msa1412730:CDS
ATGAAGGCCCGTCTACATCA+GGG 0.593568 tig0023943:-51769 Msa1412730:CDS
ACCGCCACCTGTCCTTGCTG+TGG 0.597591 tig0023943:+52918 None:intergenic
TCCACAGCAAGGACAGGTGG+CGG 0.597778 tig0023943:-52919 Msa1412730:CDS
CCACAGCACCAGTATTGAAG+AGG 0.599719 tig0023943:-51090 Msa1412730:intron
GAGGCAAAGCCTCTCTCCAA+AGG 0.600093 tig0023943:+52763 None:intergenic
CTATGCCAATCATAACTCCA+AGG 0.602658 tig0023943:+51593 None:intergenic
CAGGGGAAAATGGAAGCACT+GGG 0.604592 tig0023943:-51751 Msa1412730:CDS
TGCTCCAGAATCCAGTCGGT+CGG 0.605509 tig0023943:-52149 Msa1412730:CDS
CAAGTAGGTTGAAGGGGACA+GGG 0.605511 tig0023943:+53695 None:intergenic
ATTTAACAATGAGATAGTTG+AGG 0.605777 tig0023943:-52047 Msa1412730:CDS
TCCTATCAAAGGACACGGGA+CGG 0.605839 tig0023943:+53879 None:intergenic
TCTGCAATAAGGTATTGTGC+AGG 0.607567 tig0023943:+49033 None:intergenic
GATTTATCAGTGTCATCAAG+AGG 0.609649 tig0023943:+52676 None:intergenic
TTCTTTCTGAAGAACAAGGG+TGG 0.610228 tig0023943:-52342 Msa1412730:CDS
AAGTGGTTGCCCATGTCACA+TGG 0.611403 tig0023943:-49083 Msa1412730:CDS
GTAGTTCTTTCTGAAGAACA+AGG 0.612578 tig0023943:-52346 Msa1412730:CDS
AGGAAAGAGTTTCTTACACA+AGG 0.612990 tig0023943:+51613 None:intergenic
GGTCCATTGGATAGAAGTGG+TGG 0.613640 tig0023943:-52739 Msa1412730:CDS
TGGGTTTGGTTCAACCAACA+AGG 0.615592 tig0023943:-51732 Msa1412730:CDS
TGTTCTAGTGATGTTGATGA+AGG 0.616258 tig0023943:-51381 Msa1412730:CDS
GTAAACCTCTCAGAATTCGA+TGG 0.616459 tig0023943:+53099 None:intergenic
CAGCGTTGAGATCCTATCAA+AGG 0.617080 tig0023943:+53868 None:intergenic
TAAACACAAGTAGGTTGAAG+GGG 0.620622 tig0023943:+53689 None:intergenic
ACATTCTCTAAGCACTCCAT+GGG 0.625166 tig0023943:-52556 Msa1412730:CDS
TCAGGTCCATTGGATAGAAG+TGG 0.629020 tig0023943:-52742 Msa1412730:CDS
ATCCAGAACTTGCTATAATG+GGG 0.629741 tig0023943:-51409 Msa1412730:CDS
CTCATGAGATGTTGTAGACG+CGG 0.630558 tig0023943:+52616 None:intergenic
AGTAGAGCTTCGTTAAAAGA+CGG 0.635257 tig0023943:+49246 None:intergenic
CCGACTGGATTCTGGAGCAA+CGG 0.636821 tig0023943:+52153 None:intergenic
TGGGTGGAAGTTGGATGCAA+AGG 0.637203 tig0023943:-52537 Msa1412730:CDS
AACACACGCATAATCTGCAG+TGG 0.639874 tig0023943:-52402 Msa1412730:CDS
GGGAATTTGATGATGATGCA+TGG 0.640341 tig0023943:-53395 Msa1412730:five_prime_UTR
GTTTCCACAGCAAGGACAGG+TGG 0.641159 tig0023943:-52922 Msa1412730:CDS
TATTGACTCCATCGGAACTG+AGG 0.647628 tig0023943:+51853 None:intergenic
TTCATGGAAAATGTTCCAGA+AGG 0.647918 tig0023943:-49060 Msa1412730:CDS
TCTCTTACAGTAGACGAGCA+AGG 0.648174 tig0023943:+51812 None:intergenic
ATTTGCAAAATGATATCTCG+CGG 0.648758 tig0023943:+51144 None:intergenic
GGTCACTTGAAGAAAGTCGA+TGG 0.652423 tig0023943:+49157 None:intergenic
TGAGATCCTATCAAAGGACA+CGG 0.653123 tig0023943:+53874 None:intergenic
TAGTTCTTTCTGAAGAACAA+GGG 0.654250 tig0023943:-52345 Msa1412730:CDS
GTCTGGGCCGATAGAGAAGG+GGG 0.654295 tig0023943:-52710 Msa1412730:CDS
CCAGACATAAAACCATTCAA+AGG 0.654611 tig0023943:+52787 None:intergenic
TCATCTAGTATTGACTCCAT+CGG 0.655797 tig0023943:+51845 None:intergenic
CTACACTTAGTATCTCTGGA+AGG 0.659028 tig0023943:+52481 None:intergenic
CTTCCAGAGATACTAAGTGT+AGG 0.659308 tig0023943:-52480 Msa1412730:CDS
TGTCTGGGCCGATAGAGAAG+GGG 0.661460 tig0023943:-52711 Msa1412730:CDS
CCGTTGCTCCAGAATCCAGT+CGG 0.662617 tig0023943:-52153 Msa1412730:CDS
TACGTTTAAGACGATTTCAG+GGG 0.663223 tig0023943:-52962 Msa1412730:CDS
TTAGTCCATCGAATTCTGAG+AGG 0.663493 tig0023943:-53104 Msa1412730:CDS
GGAGCTCGATAGGATTTCAG+AGG 0.668955 tig0023943:-51216 Msa1412730:CDS
TCAAGTGAGTAATAATGGGG+TGG 0.669097 tig0023943:-53372 Msa1412730:five_prime_UTR
ACTTCTATCCAATGGACCTG+AGG 0.670903 tig0023943:+52744 None:intergenic
TGAAGGCCCGTCTACATCAG+GGG 0.674161 tig0023943:-51768 Msa1412730:CDS
ACACACGCATAATCTGCAGT+GGG 0.674769 tig0023943:-52401 Msa1412730:CDS
CCGGACATCTCTAGGAACTG+TGG 0.684188 tig0023943:-52457 Msa1412730:CDS
ATATTGGTAAAGCCCATCAG+AGG 0.686480 tig0023943:+49119 None:intergenic
AGAGGCATACATGGAAACGG+CGG 0.688502 tig0023943:-51450 Msa1412730:CDS
GCTCTGTCAAGGATGACATG+AGG 0.690355 tig0023943:-51274 Msa1412730:CDS
GAATCTACAGATGAAACACA+AGG 0.690442 tig0023943:+46971 None:intergenic
ATATGGCCTGACTATCATCA+GGG 0.691171 tig0023943:+50374 None:intergenic
AAGACAATATGCAAATATGG+GGG 0.695027 tig0023943:+47152 None:intergenic
ACTGACCCTCTTCAAGAACC+CGG 0.698335 tig0023943:+50303 None:intergenic
GAGATCCTATCAAAGGACAC+GGG 0.711438 tig0023943:+53875 None:intergenic
CCTTTGCAGCCAGTTCCACG+CGG 0.712203 tig0023943:-52817 Msa1412730:CDS
TATTTACGCCGATCTCCATG+AGG 0.738087 tig0023943:+47300 None:intergenic
AATCTACAGATGAAACACAA+GGG 0.746562 tig0023943:+46972 None:intergenic
TGGTCAAGTGAGTAATAATG+GGG 0.749924 tig0023943:-53375 Msa1412730:five_prime_UTR
TTCAAAGGTCCAGAACCGCG+TGG 0.762211 tig0023943:+52802 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATAATAATAATAATAAT+TGG + tig0023943:47072-47091 None:intergenic 0.0%
!! CTATATTTAAAAAGAAAAAA+AGG + tig0023943:47095-47114 None:intergenic 10.0%
!!! AATATTCTATATCTAAAATT+TGG - tig0023943:49900-49919 Msa1412730:intron 10.0%
!!! TTTTTTTATATAATCATCAA+AGG + tig0023943:51103-51122 None:intergenic 10.0%
!!! AGTAAATTTTAATTTTAACT+TGG - tig0023943:51970-51989 Msa1412730:CDS 10.0%
!! AATAATAATAATTGGAGATT+TGG + tig0023943:47064-47083 None:intergenic 15.0%
!!! ATTTTGTGCAATAATAAAAA+TGG - tig0023943:47616-47635 Msa1412730:intron 15.0%
!!! TTTTGTGCAATAATAAAAAT+GGG - tig0023943:47617-47636 Msa1412730:intron 15.0%
!! AATTCAAAAAAGTCATTTAT+CGG - tig0023943:49216-49235 Msa1412730:CDS 15.0%
!! CAAAAATTAAAAAAATGTAC+AGG - tig0023943:49241-49260 Msa1412730:CDS 15.0%
!!! ATTTTGCAAATTAAAAATGA+GGG - tig0023943:49755-49774 Msa1412730:intron 15.0%
!! TTATATAAACTATAGACAAA+GGG + tig0023943:50654-50673 None:intergenic 15.0%
!!! TTAAAGATTTTCTTATATCT+AGG + tig0023943:51035-51054 None:intergenic 15.0%
!! TGTTTACATTATGAATTAAA+TGG - tig0023943:51527-51546 Msa1412730:CDS 15.0%
!! AAAAAAATTAGGGTTAAAAA+AGG + tig0023943:51612-51631 None:intergenic 15.0%
!! AAATTATGAAAAACTTGAAA+GGG + tig0023943:51999-52018 None:intergenic 15.0%
!! AAAATTATGAAAAACTTGAA+AGG + tig0023943:52000-52019 None:intergenic 15.0%
!!! TTTCTATTCTAAAATTAAGT+TGG - tig0023943:52122-52141 Msa1412730:CDS 15.0%
!! ACATAATATCAATACTAATA+AGG - tig0023943:53411-53430 Msa1412730:five_prime_UTR 15.0%
!! CATAATATCAATACTAATAA+GGG - tig0023943:53412-53431 Msa1412730:five_prime_UTR 15.0%
!!! AAATATTTAATTTAGGATTG+AGG + tig0023943:53492-53511 None:intergenic 15.0%
!! AATCCTAAATTAAATATTTG+AGG - tig0023943:53493-53512 Msa1412730:five_prime_UTR 15.0%
!!! AAACCTCAAATATTTAATTT+AGG + tig0023943:53499-53518 None:intergenic 15.0%
!! GATGAAAGAAAAAAAAAATA+AGG + tig0023943:53679-53698 None:intergenic 15.0%
!!! AGAAAAAAATGTGATGTTTT+TGG + tig0023943:47121-47140 None:intergenic 20.0%
!!! AGGTTATTGTTTAATTTGAT+TGG + tig0023943:47278-47297 None:intergenic 20.0%
!! ATTAAACAATAACCTTGAAA+TGG - tig0023943:47283-47302 Msa1412730:CDS 20.0%
!! TTAAACAATAACCTTGAAAT+GGG - tig0023943:47284-47303 Msa1412730:CDS 20.0%
!! TACTGTTGAAAAATTCATAT+GGG - tig0023943:47443-47462 Msa1412730:intron 20.0%
!!! TTTGTATTTGTATTTGTTGA+GGG - tig0023943:47578-47597 Msa1412730:intron 20.0%
!!! CATTTTGCAAATTAAAAATG+AGG - tig0023943:49754-49773 Msa1412730:intron 20.0%
!!! TGAAGATCTGAAAATTTTTA+TGG - tig0023943:49935-49954 Msa1412730:intron 20.0%
!! CTTATATAAACTATAGACAA+AGG + tig0023943:50655-50674 None:intergenic 20.0%
!! TGTCTATAGTTTATATAAGT+AGG - tig0023943:50656-50675 Msa1412730:intron 20.0%
!! GTCTATAGTTTATATAAGTA+GGG - tig0023943:50657-50676 Msa1412730:intron 20.0%
!!! TTCTTTCTAAAGAAGAAATT+AGG - tig0023943:50950-50969 Msa1412730:intron 20.0%
!! CTAGTGATCAAAAAAATAAA+AGG + tig0023943:51128-51147 None:intergenic 20.0%
!!! AAAAAAAAGCTAAACTTGTT+TGG + tig0023943:51173-51192 None:intergenic 20.0%
!! AAAAACAATACAAGTTTAGT+GGG + tig0023943:51563-51582 None:intergenic 20.0%
!! AAAAAACAATACAAGTTTAG+TGG + tig0023943:51564-51583 None:intergenic 20.0%
!!! TTTTAACCCTAATTTTTTTG+TGG - tig0023943:51613-51632 Msa1412730:CDS 20.0%
!!! GTGTTTCAAGTTAAATATAT+CGG - tig0023943:51668-51687 Msa1412730:CDS 20.0%
!!! TTTTCATAATTTTCTGTACT+TGG - tig0023943:52007-52026 Msa1412730:CDS 20.0%
!!! TTGATGATATAACTCAATTT+TGG + tig0023943:52346-52365 None:intergenic 20.0%
!!! TATTAGAATTCCATTTTTAC+TGG - tig0023943:52592-52611 Msa1412730:CDS 20.0%
!!! CTTTATCTTTTATCCTATTA+AGG + tig0023943:52955-52974 None:intergenic 20.0%
!! CTTAATAGGATAAAAGATAA+AGG - tig0023943:52953-52972 Msa1412730:CDS 20.0%
!! AAATCAGAAAGAAAAAAAGA+AGG + tig0023943:53087-53106 None:intergenic 20.0%
!!! TTAGTATTGATATTATGTCA+TGG + tig0023943:53409-53428 None:intergenic 20.0%
!!! GATTTCTAAAATCAATTTAC+TGG + tig0023943:53781-53800 None:intergenic 20.0%
!!! TTAAGAGCTTTCTTATTTAT+GGG + tig0023943:53874-53893 None:intergenic 20.0%
!!! TTGTTTAATTTGATTGGTGA+TGG + tig0023943:47272-47291 None:intergenic 25.0%
! CTACTGTTGAAAAATTCATA+TGG - tig0023943:47442-47461 Msa1412730:intron 25.0%
!! GTTTGTATTTGTATTTGTTG+AGG - tig0023943:47577-47596 Msa1412730:intron 25.0%
! GCAATAATAAAAATGGGTAA+CGG - tig0023943:47623-47642 Msa1412730:intron 25.0%
! TTGTTTATTGGGATATATGA+CGG - tig0023943:48568-48587 Msa1412730:intron 25.0%
! TGTCTAGAAATCTATAAAGA+TGG + tig0023943:48630-48649 None:intergenic 25.0%
!! TAGATTTCTAGACAAAGAAT+TGG - tig0023943:48636-48655 Msa1412730:intron 25.0%
! ATTTAACAATGAGATAGTTG+AGG - tig0023943:48840-48859 Msa1412730:intron 25.0%
! GAAAAGGTAAAAGAAGTTTA+AGG - tig0023943:48962-48981 Msa1412730:intron 25.0%
!! TCTTGATAACATGATTGTTA+TGG + tig0023943:49713-49732 None:intergenic 25.0%
! ATAGAATATTTGACCATAAC+TGG + tig0023943:49890-49909 None:intergenic 25.0%
!!! GTCTGATAAAATTTTAGAAC+AGG + tig0023943:49975-49994 None:intergenic 25.0%
!! CAGACTTGAATTTTTGTATT+TGG - tig0023943:49990-50009 Msa1412730:intron 25.0%
! CATAAAATAGCAGAAATCTT+TGG + tig0023943:50305-50324 None:intergenic 25.0%
!!! CAAAGATTTCTGCTATTTTA+TGG - tig0023943:50303-50322 Msa1412730:intron 25.0%
!!! CAAACATAATTTTGCTATTG+AGG - tig0023943:50889-50908 Msa1412730:intron 25.0%
!! TTTTAATGCCAAAATAAGTC+AGG - tig0023943:51236-51255 Msa1412730:CDS 25.0%
! ATCACTATTAGTAGTTGTAT+AGG - tig0023943:51428-51447 Msa1412730:CDS 25.0%
! TCATGATTGTATATGATTCT+TGG - tig0023943:51461-51480 Msa1412730:CDS 25.0%
! CATGATTGTATATGATTCTT+GGG - tig0023943:51462-51481 Msa1412730:CDS 25.0%
!!! TTGTTTTTTGTTGCCTAATT+TGG - tig0023943:51575-51594 Msa1412730:CDS 25.0%
! GCTATACCACAAAAAAATTA+GGG + tig0023943:51622-51641 None:intergenic 25.0%
! CTGTTACAATAATATCTGAT+GGG + tig0023943:51932-51951 None:intergenic 25.0%
! ACTGTTACAATAATATCTGA+TGG + tig0023943:51933-51952 None:intergenic 25.0%
! TCTGCTATAATTGAATTTAG+AGG - tig0023943:52080-52099 Msa1412730:CDS 25.0%
! CTGCTATAATTGAATTTAGA+GGG - tig0023943:52081-52100 Msa1412730:CDS 25.0%
!!! CTTTTAGTTAAACTGAAGTT+TGG - tig0023943:52208-52227 Msa1412730:CDS 25.0%
!! TAAATCTTTGGTTTCGATTT+CGG - tig0023943:52234-52253 Msa1412730:CDS 25.0%
!!! TAACTCAATTTTGGAAACAA+AGG + tig0023943:52337-52356 None:intergenic 25.0%
! GGAATTCTAATAAAGATGTT+CGG + tig0023943:52584-52603 None:intergenic 25.0%
!! GCTTTTAATATTCATGGAAA+GGG + tig0023943:52666-52685 None:intergenic 25.0%
!! AGCTTTTAATATTCATGGAA+AGG + tig0023943:52667-52686 None:intergenic 25.0%
!!! ACATATAGTTTGTTTTCAAC+CGG - tig0023943:52781-52800 Msa1412730:CDS 25.0%
! AAATCAGTTGCCAATTATTT+GGG + tig0023943:53062-53081 None:intergenic 25.0%
! AAAATCAGTTGCCAATTATT+TGG + tig0023943:53063-53082 None:intergenic 25.0%
! CTATTTGTAACAACAAACAT+AGG - tig0023943:53329-53348 Msa1412730:five_prime_UTR 25.0%
! AGAAACACAAGAATCATAAA+TGG + tig0023943:53358-53377 None:intergenic 25.0%
! TCAAGACAATATGCAAATAT+GGG + tig0023943:53740-53759 None:intergenic 25.0%
! ATCAAGACAATATGCAAATA+TGG + tig0023943:53741-53760 None:intergenic 25.0%
! TCTTGATATTGAAACAATCT+TGG - tig0023943:53754-53773 Msa1412730:five_prime_UTR 25.0%
! CTTGATATTGAAACAATCTT+GGG - tig0023943:53755-53774 Msa1412730:five_prime_UTR 25.0%
! AATTCAAAACAAATTAGGAC+TGG + tig0023943:53848-53867 None:intergenic 25.0%
! GGGTAAATTCAAAACAAATT+AGG + tig0023943:53853-53872 None:intergenic 25.0%
!! TAAGAGCTTTCTTATTTATG+GGG + tig0023943:53873-53892 None:intergenic 25.0%
!! GTTAAGAGCTTTCTTATTTA+TGG + tig0023943:53875-53894 None:intergenic 25.0%
CTCTTTCTTTCTTCTTTCTT+GGG + tig0023943:46987-47006 None:intergenic 30.0%
TCTCTTTCTTTCTTCTTTCT+TGG + tig0023943:46988-47007 None:intergenic 30.0%
! ATAAACACAAGTAGGTTGAA+GGG + tig0023943:47202-47221 None:intergenic 30.0%
ATTGAGACATAAACACAAGT+AGG + tig0023943:47210-47229 None:intergenic 30.0%
GTTTATGTCTCAATGATTCA+AGG - tig0023943:47216-47235 Msa1412730:three_prime_UTR 30.0%
!! TTTAATTTGATTGGTGATGG+TGG + tig0023943:47269-47288 None:intergenic 30.0%
AAACACAAAAACCCATTTCA+AGG + tig0023943:47298-47317 None:intergenic 30.0%
AAAACACTCTTTACCTCAAA+GGG + tig0023943:47403-47422 None:intergenic 30.0%
AAAAACACTCTTTACCTCAA+AGG + tig0023943:47404-47423 None:intergenic 30.0%
!!! GGTTGTTTTGTGTTTTTTTG+AGG - tig0023943:47464-47483 Msa1412730:intron 30.0%
!!! TTGTGTTTTTTTGAGGTTGT+TGG - tig0023943:47471-47490 Msa1412730:intron 30.0%
!!! TGTGTTTTTTTGAGGTTGTT+GGG - tig0023943:47472-47491 Msa1412730:intron 30.0%
ATGGTCAAGTGAGTAATAAT+GGG - tig0023943:47511-47530 Msa1412730:intron 30.0%
!!! TTGATGGGTTTTTAGCTAAT+TGG - tig0023943:47547-47566 Msa1412730:intron 30.0%
!!! TGATGGGTTTTTAGCTAATT+GGG - tig0023943:47548-47567 Msa1412730:intron 30.0%
!! ACACCATTTTTACCATTGAA+TGG + tig0023943:47677-47696 None:intergenic 30.0%
!! TGGTAAAAATGGTGTTGATT+TGG - tig0023943:47682-47701 Msa1412730:intron 30.0%
!!! TTTTTAGAGCCATTAGATGA+AGG - tig0023943:47707-47726 Msa1412730:intron 30.0%
! CACTGATAAATCCAACTTTT+CGG - tig0023943:48222-48241 Msa1412730:intron 30.0%
TGTTTATACTCAGCTTCATA+CGG + tig0023943:48469-48488 None:intergenic 30.0%
! TAGTTCTTTCTGAAGAACAA+GGG - tig0023943:48542-48561 Msa1412730:intron 30.0%
TTTCTAGACAAAGAATTGGA+AGG - tig0023943:48640-48659 Msa1412730:intron 30.0%
AAGAATTGGAAGGTTTACTT+TGG - tig0023943:48650-48669 Msa1412730:intron 30.0%
AGAATTGGAAGGTTTACTTT+GGG - tig0023943:48651-48670 Msa1412730:intron 30.0%
!!! TTTTAAAGTTTCAGGGACTT+CGG + tig0023943:48710-48729 None:intergenic 30.0%
GATTGATCCTTGATTAATTC+AGG + tig0023943:48820-48839 None:intergenic 30.0%
TACTTCCACAATTAGATAAC+TGG + tig0023943:48897-48916 None:intergenic 30.0%
!! AAATCCAGAACTTGCTATAA+TGG - tig0023943:49476-49495 Msa1412730:intron 30.0%
!! AATCCAGAACTTGCTATAAT+GGG - tig0023943:49477-49496 Msa1412730:intron 30.0%
AGATGTTTATGTCATGAATC+TGG - tig0023943:49533-49552 Msa1412730:intron 30.0%
GATGTTTATGTCATGAATCT+GGG - tig0023943:49534-49553 Msa1412730:intron 30.0%
TGATTGTTATGGTTGTGAAT+TGG + tig0023943:49702-49721 None:intergenic 30.0%
ATTTGCAAAATGATATCTCG+CGG + tig0023943:49746-49765 None:intergenic 30.0%
ATTTGATTCACCAATACACA+GGG + tig0023943:49838-49857 None:intergenic 30.0%
TATTTGATTCACCAATACAC+AGG + tig0023943:49839-49858 None:intergenic 30.0%
TTGAAGATCTAAACCAGTTA+TGG - tig0023943:49874-49893 Msa1412730:intron 30.0%
GATCAGAAAAGTTCAATGAT+CGG + tig0023943:50097-50116 None:intergenic 30.0%
CACTTAGTAATTCAGTGTAT+AGG + tig0023943:50133-50152 None:intergenic 30.0%
AAAAAACATTTGACACTCGA+CGG + tig0023943:50362-50381 None:intergenic 30.0%
TTTCACTCGATCATTCAATA+TGG + tig0023943:50533-50552 None:intergenic 30.0%
ATATTGAATGATCGAGTGAA+AGG - tig0023943:50532-50551 Msa1412730:intron 30.0%
! TTAAAAGTTACCAGAGCATT+TGG - tig0023943:50559-50578 Msa1412730:intron 30.0%
CATCAAACTGAATTTCAGAT+GGG + tig0023943:50627-50646 None:intergenic 30.0%
! CCTAAGTTTTCTGTATGTTA+TGG + tig0023943:50706-50725 None:intergenic 30.0%
CCATAACATACAGAAAACTT+AGG - tig0023943:50703-50722 Msa1412730:intron 30.0%
ACAGAAAACTTAGGAAGAAA+AGG - tig0023943:50712-50731 Msa1412730:intron 30.0%
! CGTTAAATTTTTCGCCAAAA+TGG - tig0023943:50758-50777 Msa1412730:intron 30.0%
! AAATTTTTCGCCAAAATGGT+AGG - tig0023943:50762-50781 Msa1412730:intron 30.0%
TAGCTAAACTATATCTCTTG+TGG - tig0023943:50832-50851 Msa1412730:intron 30.0%
AGCTAAACTATATCTCTTGT+GGG - tig0023943:50833-50852 Msa1412730:intron 30.0%
! TAACGGATGAAATAGTCAAT+GGG - tig0023943:50863-50882 Msa1412730:intron 30.0%
!!! TAATTTTGCTATTGAGGTCT+AGG - tig0023943:50895-50914 Msa1412730:intron 30.0%
CAAAAATAAGTCAGACCAAA+TGG + tig0023943:50923-50942 None:intergenic 30.0%
! TTCTTCTTTAGAAAGAAGAG+AGG + tig0023943:50947-50966 None:intergenic 30.0%
AAAAGTAGTTGAGATTTGAG+AGG - tig0023943:51054-51073 Msa1412730:intron 30.0%
! CTTGTTTGGTAGTTGTTAAA+AGG + tig0023943:51159-51178 None:intergenic 30.0%
CCAAAATAAGTCAGGTTAAA+CGG - tig0023943:51244-51263 Msa1412730:CDS 30.0%
CAAAATAAGTCAGGTTAAAC+GGG - tig0023943:51245-51264 Msa1412730:CDS 30.0%
CTTCCCTTTAAACTAGAATA+GGG + tig0023943:51272-51291 None:intergenic 30.0%
TTGATTATAGCGTAGATCAT+TGG - tig0023943:51297-51316 Msa1412730:CDS 30.0%
CTTTATACAAACAAGCTTCT+AGG - tig0023943:51351-51370 Msa1412730:CDS 30.0%
AGTAGTTGTATAGGTTCATA+TGG - tig0023943:51437-51456 Msa1412730:CDS 30.0%
! TGTATATGATTCTTGGGTTT+TGG - tig0023943:51468-51487 Msa1412730:CDS 30.0%
GGCTATACCACAAAAAAATT+AGG + tig0023943:51623-51642 None:intergenic 30.0%
CTTCTTCATTGCTGAAATAT+TGG + tig0023943:51787-51806 None:intergenic 30.0%
ATATTTCAGCAATGAAGAAG+TGG - tig0023943:51787-51806 Msa1412730:CDS 30.0%
CAATAATATCTGATGGGAAT+AGG + tig0023943:51926-51945 None:intergenic 30.0%
! GAAGTTTGGAACTAAATCTT+TGG - tig0023943:52222-52241 Msa1412730:CDS 30.0%
! AAATCTTTGGTTTCGATTTC+GGG - tig0023943:52235-52254 Msa1412730:CDS 30.0%
! ATGGCAGCTTTTAATATTCA+TGG + tig0023943:52672-52691 None:intergenic 30.0%
AATATTAAAAGCTGCCATGT+AGG - tig0023943:52674-52693 Msa1412730:CDS 30.0%
ATATTAAAAGCTGCCATGTA+GGG - tig0023943:52675-52694 Msa1412730:CDS 30.0%
AACAATAAGTCTCTTGTAGA+GGG + tig0023943:52727-52746 None:intergenic 30.0%
AAACAATAAGTCTCTTGTAG+AGG + tig0023943:52728-52747 None:intergenic 30.0%
!!! CATATAGTTTGTTTTCAACC+GGG - tig0023943:52782-52801 Msa1412730:CDS 30.0%
TAATTTATTACTTTGCCCTC+TGG - tig0023943:52851-52870 Msa1412730:CDS 30.0%
AATCAGTTGCCAATTATTTG+GGG + tig0023943:53061-53080 None:intergenic 30.0%
! TTTCCTTCTGTTTTCAAAAC+CGG - tig0023943:53106-53125 Msa1412730:CDS 30.0%
AGCACTGCTCTTATATTATT+AGG + tig0023943:53209-53228 None:intergenic 30.0%
GACAATGTTTATTGTTACGA+AGG + tig0023943:53387-53406 None:intergenic 30.0%
!! TTAACAGAGAAGCACTTAAA+AGG + tig0023943:53701-53720 None:intergenic 30.0%
! AGTGCTTCTCTGTTAATTTT+TGG - tig0023943:53705-53724 Msa1412730:five_prime_UTR 30.0%
!!! TTCTCTGTTAATTTTTGGCT+AGG - tig0023943:53710-53729 Msa1412730:five_prime_UTR 30.0%
AAGACAATATGCAAATATGG+GGG + tig0023943:53738-53757 None:intergenic 30.0%
CAAGACAATATGCAAATATG+GGG + tig0023943:53739-53758 None:intergenic 30.0%
GAACAAAGATTGAGACAAAG+AGG + tig0023943:47147-47166 None:intergenic 35.0%
! TAAACACAAGTAGGTTGAAG+GGG + tig0023943:47201-47220 None:intergenic 35.0%
! CATAAACACAAGTAGGTTGA+AGG + tig0023943:47203-47222 None:intergenic 35.0%
CATGGTCAAGTGAGTAATAA+TGG - tig0023943:47510-47529 Msa1412730:intron 35.0%
TGGTCAAGTGAGTAATAATG+GGG - tig0023943:47512-47531 Msa1412730:intron 35.0%
! AGTAATAATGGGGTGGTTAT+GGG - tig0023943:47522-47541 Msa1412730:intron 35.0%
!! TGTATTTGTTGAGGGTTTTG+AGG - tig0023943:47586-47605 Msa1412730:intron 35.0%
! GTGCCATTCAATGGTAAAAA+TGG - tig0023943:47671-47690 Msa1412730:intron 35.0%
TGTCCTAAACCTTCATCTAA+TGG + tig0023943:47719-47738 None:intergenic 35.0%
!! ATCAAGAGTGCTTGAATCAA+CGG + tig0023943:47813-47832 None:intergenic 35.0%
TTCGTTTAGGCATGATAGTA+TGG - tig0023943:47850-47869 Msa1412730:intron 35.0%
! ATGGAGCATTCTAATTCTTC+TGG - tig0023943:47869-47888 Msa1412730:intron 35.0%
TCGTCTTAAACGTAGTTTCA+GGG + tig0023943:47919-47938 None:intergenic 35.0%
ATCGTCTTAAACGTAGTTTC+AGG + tig0023943:47920-47939 None:intergenic 35.0%
! ACTACGTTTAAGACGATTTC+AGG - tig0023943:47923-47942 Msa1412730:intron 35.0%
! CTACGTTTAAGACGATTTCA+GGG - tig0023943:47924-47943 Msa1412730:intron 35.0%
! TACGTTTAAGACGATTTCAG+GGG - tig0023943:47925-47944 Msa1412730:intron 35.0%
CCAGACATAAAACCATTCAA+AGG + tig0023943:48103-48122 None:intergenic 35.0%
!!! CCTTTGAATGGTTTTATGTC+TGG - tig0023943:48100-48119 Msa1412730:intron 35.0%
GATTTATCAGTGTCATCAAG+AGG + tig0023943:48214-48233 None:intergenic 35.0%
! GTAGTTCTTTCTGAAGAACA+AGG - tig0023943:48541-48560 Msa1412730:intron 35.0%
AACAAGGGTGGTTGTTTATT+GGG - tig0023943:48557-48576 Msa1412730:intron 35.0%
ATCAAAAAATCAGGTGCATC+TGG + tig0023943:48604-48623 None:intergenic 35.0%
AGATGGCTCATCAAAAAATC+AGG + tig0023943:48613-48632 None:intergenic 35.0%
! TTTAAAGTTTCAGGGACTTC+GGG + tig0023943:48709-48728 None:intergenic 35.0%
!!! CGGTAGCTTTTAAAGTTTCA+GGG + tig0023943:48717-48736 None:intergenic 35.0%
!!! ACGGTAGCTTTTAAAGTTTC+AGG + tig0023943:48718-48737 None:intergenic 35.0%
!!! GAATGTTTTGAAGCTTGTTC+TGG - tig0023943:48793-48812 Msa1412730:intron 35.0%
TTCTGGTCCTGAATTAATCA+AGG - tig0023943:48810-48829 Msa1412730:intron 35.0%
CAATGAGATAGTTGAGGAAA+AGG - tig0023943:48846-48865 Msa1412730:intron 35.0%
GAACACCAGTTATCTAATTG+TGG - tig0023943:48889-48908 Msa1412730:intron 35.0%
CATGAAAAGTTGACTGGAAA+AGG - tig0023943:48946-48965 Msa1412730:intron 35.0%
GCTTTATGAGCTACTTCAAA+TGG - tig0023943:48984-49003 Msa1412730:intron 35.0%
AGCTACTTCAAATGGAATCT+TGG - tig0023943:48992-49011 Msa1412730:intron 35.0%
GCTACTTCAAATGGAATCTT+GGG - tig0023943:48993-49012 Msa1412730:intron 35.0%
!! TCATCTAGTATTGACTCCAT+CGG + tig0023943:49045-49064 None:intergenic 35.0%
! TTTTTCCTGCTTCTGTATCA+AGG - tig0023943:49190-49209 Msa1412730:CDS 35.0%
AGTTTCTTACACAAGGACTT+TGG + tig0023943:49270-49289 None:intergenic 35.0%
AGGAAAGAGTTTCTTACACA+AGG + tig0023943:49277-49296 None:intergenic 35.0%
TGTGTAAGAAACTCTTTCCT+TGG - tig0023943:49277-49296 Msa1412730:intron 35.0%
TCTTTCCTTGGAGTTATGAT+TGG - tig0023943:49289-49308 Msa1412730:intron 35.0%
TTGGAGTTATGATTGGCATA+GGG - tig0023943:49296-49315 Msa1412730:intron 35.0%
GAGAAAATATTAGAAGCCTC+TGG - tig0023943:49336-49355 Msa1412730:intron 35.0%
!! TAACGCAGTTTTAACAGCAA+TGG - tig0023943:49392-49411 Msa1412730:intron 35.0%
!! ATCCAGAACTTGCTATAATG+GGG - tig0023943:49478-49497 Msa1412730:intron 35.0%
! TGTTCTAGTGATGTTGATGA+AGG - tig0023943:49506-49525 Msa1412730:intron 35.0%
!! TTGTATTTGGTTCTGCTTCT+TGG - tig0023943:50003-50022 Msa1412730:intron 35.0%
!! TTGGTGATTTTGCATTCATC+AGG - tig0023943:50230-50249 Msa1412730:intron 35.0%
AAAAACATTTGACACTCGAC+GGG + tig0023943:50361-50380 None:intergenic 35.0%
TTTCAATTTCTGTTTCCTGC+AGG - tig0023943:50465-50484 Msa1412730:intron 35.0%
TTATTCTTGAAACTTCCTGC+AGG + tig0023943:50483-50502 None:intergenic 35.0%
GCATCAAACTGAATTTCAGA+TGG + tig0023943:50628-50647 None:intergenic 35.0%
! CCAGTGATTTGTATGATTCA+AGG + tig0023943:50795-50814 None:intergenic 35.0%
CCTTGAATCATACAAATCAC+TGG - tig0023943:50792-50811 Msa1412730:intron 35.0%
!! GTAACGGATGAAATAGTCAA+TGG - tig0023943:50862-50881 Msa1412730:intron 35.0%
AACGGATGAAATAGTCAATG+GGG - tig0023943:50864-50883 Msa1412730:intron 35.0%
! AGGAGCTTTTCAAAACAAGT+AGG - tig0023943:51074-51093 Msa1412730:intron 35.0%
! CCGTTTAACCTGACTTATTT+TGG + tig0023943:51247-51266 None:intergenic 35.0%
!! GGACCCTATTCTAGTTTAAA+GGG - tig0023943:51266-51285 Msa1412730:CDS 35.0%
CCTTCCCTTTAAACTAGAAT+AGG + tig0023943:51273-51292 None:intergenic 35.0%
!! CCTATTCTAGTTTAAAGGGA+AGG - tig0023943:51270-51289 Msa1412730:CDS 35.0%
!!! TGATTCTTGGGTTTTGGAAT+AGG - tig0023943:51474-51493 Msa1412730:CDS 35.0%
AGTAGAGCTTCGTTAAAAGA+CGG + tig0023943:51644-51663 None:intergenic 35.0%
TTCATGGAAAATGTTCCAGA+AGG - tig0023943:51827-51846 Msa1412730:CDS 35.0%
AATATCTGATGGGAATAGGA+AGG + tig0023943:51922-51941 None:intergenic 35.0%
!!! GTGTATGTTTAGTTTTGCAG+TGG + tig0023943:52487-52506 None:intergenic 35.0%
CAAAGTTAGCTGTCTTCTAT+TGG + tig0023943:52509-52528 None:intergenic 35.0%
TTCTGAATTTGTCACGACAT+AGG - tig0023943:52751-52770 Msa1412730:CDS 35.0%
TCTGAATTTGTCACGACATA+GGG - tig0023943:52752-52771 Msa1412730:CDS 35.0%
GTAGTAGAAACTGGTATCTA+TGG - tig0023943:52812-52831 Msa1412730:CDS 35.0%
GATGATGATTCTCAAAACAG+AGG - tig0023943:52876-52895 Msa1412730:CDS 35.0%
CTATTAAGGAACTACCATTG+TGG + tig0023943:52941-52960 None:intergenic 35.0%
CACAATGGTAGTTCCTTAAT+AGG - tig0023943:52939-52958 Msa1412730:CDS 35.0%
ATATCCACTCCCCAAATAAT+TGG - tig0023943:53049-53068 Msa1412730:CDS 35.0%
CAACCAGCAGTTATGTTATT+AGG + tig0023943:53132-53151 None:intergenic 35.0%
! ATAACATAACTGCTGGTTGT+TGG - tig0023943:53133-53152 Msa1412730:CDS 35.0%
! GGTTGTTGGCTAATAACATA+AGG - tig0023943:53147-53166 Msa1412730:CDS 35.0%
AGAGAAGAATGCATACAGTT+AGG - tig0023943:53256-53275 Msa1412730:exon 35.0%
! AGATTTGACCAATCAAGTTG+TGG - tig0023943:53279-53298 Msa1412730:five_prime_UTR 35.0%
CAAATAGTAACTACCTACTC+CGG + tig0023943:53316-53335 None:intergenic 35.0%
GAAAATCCATTCCTGCATAT+TGG + tig0023943:53550-53569 None:intergenic 35.0%
TTGATATTCCTCATGGAGAT+CGG - tig0023943:53579-53598 Msa1412730:five_prime_UTR 35.0%
TCAAAACAAATTAGGACTGG+TGG + tig0023943:53845-53864 None:intergenic 35.0%
TGAGATCCTATCAAAGGACA+CGG + tig0023943:47016-47035 None:intergenic 40.0%
!! GGGAATTTGATGATGATGCA+TGG - tig0023943:47492-47511 Msa1412730:intron 40.0%
! TCAAGTGAGTAATAATGGGG+TGG - tig0023943:47515-47534 Msa1412730:intron 40.0%
! GAGTAATAATGGGGTGGTTA+TGG - tig0023943:47521-47540 Msa1412730:intron 40.0%
! GTAATAATGGGGTGGTTATG+GGG - tig0023943:47523-47542 Msa1412730:intron 40.0%
!!! TGTTGAGGGTTTTGAGGTTT+AGG - tig0023943:47592-47611 Msa1412730:intron 40.0%
! GGTTGTTTAGTGCCATTCAA+TGG - tig0023943:47662-47681 Msa1412730:intron 40.0%
GAGCCATTAGATGAAGGTTT+AGG - tig0023943:47713-47732 Msa1412730:intron 40.0%
GCAGGAGATTCAAACATAGT+TGG + tig0023943:47761-47780 None:intergenic 40.0%
!! GAATTCGATGGACTAATAGC+AGG + tig0023943:47779-47798 None:intergenic 40.0%
TTAGTCCATCGAATTCTGAG+AGG - tig0023943:47783-47802 Msa1412730:intron 40.0%
GTAAACCTCTCAGAATTCGA+TGG + tig0023943:47791-47810 None:intergenic 40.0%
!! CTTGATTCTGAAACCTTGAG+TGG - tig0023943:47827-47846 Msa1412730:intron 40.0%
AAACCTTGAGTGGTTCGTTT+AGG - tig0023943:47837-47856 Msa1412730:intron 40.0%
!! TTCTTCTGGTTTACACAAGC+AGG - tig0023943:47883-47902 Msa1412730:intron 40.0%
!! TCTTCTGGTTTACACAAGCA+GGG - tig0023943:47884-47903 Msa1412730:intron 40.0%
CAAGAAATCACCAGCAAACA+TGG + tig0023943:48005-48024 None:intergenic 40.0%
! CATGTTTGCTGGTGATTTCT+TGG - tig0023943:48003-48022 Msa1412730:intron 40.0%
!!! TGGTTTTATGTCTGGTCCTT+TGG - tig0023943:48108-48127 Msa1412730:intron 40.0%
AAACCACCACTTCTATCCAA+TGG + tig0023943:48154-48173 None:intergenic 40.0%
!! CATCTCATGAGAAGTGTTAG+TGG - tig0023943:48283-48302 Msa1412730:intron 40.0%
AACATTCTCTAAGCACTCCA+TGG - tig0023943:48330-48349 Msa1412730:intron 40.0%
ACATTCTCTAAGCACTCCAT+GGG - tig0023943:48331-48350 Msa1412730:intron 40.0%
GCAAAGGTTGTTCTTTCAAC+CGG - tig0023943:48366-48385 Msa1412730:intron 40.0%
CTACACTTAGTATCTCTGGA+AGG + tig0023943:48409-48428 None:intergenic 40.0%
CTTCCAGAGATACTAAGTGT+AGG - tig0023943:48407-48426 Msa1412730:intron 40.0%
TACATGAACCCTATCTTCAC+CGG + tig0023943:48524-48543 None:intergenic 40.0%
! TTCTTTCTGAAGAACAAGGG+TGG - tig0023943:48545-48564 Msa1412730:intron 40.0%
GAACAAGGGTGGTTGTTTAT+TGG - tig0023943:48556-48575 Msa1412730:intron 40.0%
!! GGGATATATGACGGTTTTAG+TGG - tig0023943:48577-48596 Msa1412730:intron 40.0%
GTTCAGCATGAAAAGTTGAC+TGG - tig0023943:48940-48959 Msa1412730:intron 40.0%
TAATGATTCCTCAGTTCCGA+TGG - tig0023943:49026-49045 Msa1412730:CDS 40.0%
TCGTCTACTGTAAGAGAAGA+TGG - tig0023943:49081-49100 Msa1412730:CDS 40.0%
!! AGAAGATGGCTCTAAACATC+AGG - tig0023943:49095-49114 Msa1412730:CDS 40.0%
CTATGCCAATCATAACTCCA+AGG + tig0023943:49297-49316 None:intergenic 40.0%
CTTGGAGTTATGATTGGCAT+AGG - tig0023943:49295-49314 Msa1412730:intron 40.0%
! GCATTTTCTAATAGGTCCAG+AGG + tig0023943:49355-49374 None:intergenic 40.0%
CTGGACCTATTAGAAAATGC+AGG - tig0023943:49355-49374 Msa1412730:intron 40.0%
! CCAGACCTGCATTTTCTAAT+AGG + tig0023943:49363-49382 None:intergenic 40.0%
CCTATTAGAAAATGCAGGTC+TGG - tig0023943:49360-49379 Msa1412730:intron 40.0%
AGCTCTTGAAAGAACAGAAG+AGG - tig0023943:49419-49438 Msa1412730:intron 40.0%
! AAGAACAGAAGAGGCATACA+TGG - tig0023943:49428-49447 Msa1412730:intron 40.0%
! AGAAGAGGCATACATGGAAA+CGG - tig0023943:49434-49453 Msa1412730:intron 40.0%
TGACAGAGCTTGAATTAGGA+TGG + tig0023943:49602-49621 None:intergenic 40.0%
TCCTAATTCAAGCTCTGTCA+AGG - tig0023943:49602-49621 Msa1412730:intron 40.0%
TCCTTGACAGAGCTTGAATT+AGG + tig0023943:49606-49625 None:intergenic 40.0%
TAGAGAGTCATTAGTACGCA+TGG - tig0023943:49650-49669 Msa1412730:intron 40.0%
GGAACATACCTCTTCAATAC+TGG + tig0023943:49808-49827 None:intergenic 40.0%
TGCACAACAGAATGATCTGT+TGG - tig0023943:50211-50230 Msa1412730:intron 40.0%
ATATGGCCTGACTATCATCA+GGG + tig0023943:50516-50535 None:intergenic 40.0%
AATATGGCCTGACTATCATC+AGG + tig0023943:50517-50536 None:intergenic 40.0%
ATCATACAAATCACTGGTCC+TGG - tig0023943:50798-50817 Msa1412730:intron 40.0%
TCATACAAATCACTGGTCCT+GGG - tig0023943:50799-50818 Msa1412730:intron 40.0%
!! GGGACCCTATTCTAGTTTAA+AGG - tig0023943:51265-51284 Msa1412730:CDS 40.0%
AGCGTAGATCATTGGATTTG+CGG - tig0023943:51305-51324 Msa1412730:CDS 40.0%
TGCCTAATTTGGAAACACTG+AGG - tig0023943:51586-51605 Msa1412730:CDS 40.0%
! TTTTAACGAAGCTCTACTCG+AGG - tig0023943:51646-51665 Msa1412730:CDS 40.0%
! TTCTTCAAGTGACCGATTCT+TGG - tig0023943:51739-51758 Msa1412730:CDS 40.0%
ATATTGGTAAAGCCCATCAG+AGG + tig0023943:51771-51790 None:intergenic 40.0%
TTCCATGAACCATGTGACAT+GGG + tig0023943:51816-51835 None:intergenic 40.0%
TTTCCATGAACCATGTGACA+TGG + tig0023943:51817-51836 None:intergenic 40.0%
!! TCTGCAATAAGGTATTGTGC+AGG + tig0023943:51857-51876 None:intergenic 40.0%
AGAAGAGAAGCTCTGCAATA+AGG + tig0023943:51868-51887 None:intergenic 40.0%
TTCTGCGCTGCTAAAAAGAA+TGG - tig0023943:51884-51903 Msa1412730:CDS 40.0%
! AACCGATTCTAACCTGAAGT+TGG - tig0023943:52302-52321 Msa1412730:CDS 40.0%
! ACCGATTCTAACCTGAAGTT+GGG - tig0023943:52303-52322 Msa1412730:CDS 40.0%
! TCCCAACTTCAGGTTAGAAT+CGG + tig0023943:52307-52326 None:intergenic 40.0%
AATTACTGGATGACCCTACA+TGG + tig0023943:52691-52710 None:intergenic 40.0%
TAAGTCTCTTGTAGAGGGAT+TGG + tig0023943:52722-52741 None:intergenic 40.0%
!! GTTTGTTTTCAACCGGGTTA+TGG - tig0023943:52788-52807 Msa1412730:CDS 40.0%
GTTTCTACTACACCATAACC+CGG + tig0023943:52803-52822 None:intergenic 40.0%
GGTTATGGTGTAGTAGAAAC+TGG - tig0023943:52803-52822 Msa1412730:CDS 40.0%
GAGAATCATCATCATCCAGA+GGG + tig0023943:52869-52888 None:intergenic 40.0%
TGAGAATCATCATCATCCAG+AGG + tig0023943:52870-52889 None:intergenic 40.0%
!! GACTCTTGAACTTCTAGGAT+AGG + tig0023943:52982-53001 None:intergenic 40.0%
TCCTAGAAGTTCAAGAGTCT+TGG - tig0023943:52983-53002 Msa1412730:CDS 40.0%
ACCAAGACTCTTGAACTTCT+AGG + tig0023943:52987-53006 None:intergenic 40.0%
! GAGTGGATATTGATTGAGAG+AGG + tig0023943:53039-53058 None:intergenic 40.0%
CAGCAGTTATGTTATTAGGC+CGG + tig0023943:53128-53147 None:intergenic 40.0%
AAATGCTAACAAGTGCCCTT+AGG - tig0023943:53171-53190 Msa1412730:CDS 40.0%
ATCCATTCCTGCATATTGGA+GGG + tig0023943:53546-53565 None:intergenic 40.0%
AATCCATTCCTGCATATTGG+AGG + tig0023943:53547-53566 None:intergenic 40.0%
GAACTGCTTGATATTCCTCA+TGG - tig0023943:53572-53591 Msa1412730:five_prime_UTR 40.0%
TCACGATGATGTATCTGTCA+TGG - tig0023943:53610-53629 Msa1412730:five_prime_UTR 40.0%
ATCTGTCATGGTCGTTTCTT+TGG - tig0023943:53622-53641 Msa1412730:five_prime_UTR 40.0%
! TTTCTTTGGAGGGAAGGATT+TGG - tig0023943:53636-53655 Msa1412730:five_prime_UTR 40.0%
! GGCAGCAGTAAAGGATTTTA+GGG + tig0023943:53897-53916 None:intergenic 40.0%
GAGATCCTATCAAAGGACAC+GGG + tig0023943:47015-47034 None:intergenic 45.0%
! CAGCGTTGAGATCCTATCAA+AGG + tig0023943:47022-47041 None:intergenic 45.0%
TCCTTTGATCTGACCCTTTG+AGG - tig0023943:47387-47406 Msa1412730:intron 45.0%
ACCTCAAAGGGTCAGATCAA+AGG + tig0023943:47391-47410 None:intergenic 45.0%
ATGCCTAAACGAACCACTCA+AGG + tig0023943:47843-47862 None:intergenic 45.0%
! TGTCCTTGCTGTGGAAACAT+TGG + tig0023943:47963-47982 None:intergenic 45.0%
AATGTTTCCACAGCAAGGAC+AGG - tig0023943:47962-47981 Msa1412730:intron 45.0%
ACTTCTATCCAATGGACCTG+AGG + tig0023943:48146-48165 None:intergenic 45.0%
TCAGGTCCATTGGATAGAAG+TGG - tig0023943:48145-48164 Msa1412730:intron 45.0%
AGAAGTGGTGGTTTCATGTC+TGG - tig0023943:48160-48179 Msa1412730:intron 45.0%
GAAGTGGTGGTTTCATGTCT+GGG - tig0023943:48161-48180 Msa1412730:intron 45.0%
GACATAACCCCCTTCTCTAT+CGG + tig0023943:48187-48206 None:intergenic 45.0%
ATAGAGAAGGGGGTTATGTC+AGG - tig0023943:48187-48206 Msa1412730:intron 45.0%
CTCATGAGATGTTGTAGACG+CGG + tig0023943:48274-48293 None:intergenic 45.0%
!! CATGAGAAGTGTTAGTGGAC+CGG - tig0023943:48288-48307 Msa1412730:intron 45.0%
CGAGAAAACGTGTTCTTCAC+CGG + tig0023943:48310-48329 None:intergenic 45.0%
CTTTCAACCGGTTACTCAGT+TGG - tig0023943:48378-48397 Msa1412730:intron 45.0%
CAGAGATACTAAGTGTAGGC+CGG - tig0023943:48411-48430 Msa1412730:intron 45.0%
AACACACGCATAATCTGCAG+TGG - tig0023943:48485-48504 Msa1412730:intron 45.0%
ACACACGCATAATCTGCAGT+GGG - tig0023943:48486-48505 Msa1412730:intron 45.0%
TCGGGTTTAAGGGAATCTAC+AGG + tig0023943:48691-48710 None:intergenic 45.0%
! TTCAGGGACTTCGGGTTTAA+GGG + tig0023943:48701-48720 None:intergenic 45.0%
! TTTCAGGGACTTCGGGTTTA+AGG + tig0023943:48702-48721 None:intergenic 45.0%
!! TATTGACTCCATCGGAACTG+AGG + tig0023943:49037-49056 None:intergenic 45.0%
TCTCTTACAGTAGACGAGCA+AGG + tig0023943:49078-49097 None:intergenic 45.0%
!! GGCTCTAAACATCAGGATGA+AGG - tig0023943:49102-49121 Msa1412730:CDS 45.0%
! CATTTTCCCCTGATGTAGAC+GGG + tig0023943:49128-49147 None:intergenic 45.0%
! CCATTTTCCCCTGATGTAGA+CGG + tig0023943:49129-49148 None:intergenic 45.0%
!! GAAAATGGAAGCACTGGGTT+TGG - tig0023943:49141-49160 Msa1412730:CDS 45.0%
! TGGGTTTGGTTCAACCAACA+AGG - tig0023943:49155-49174 Msa1412730:CDS 45.0%
TTCTGCCTTGATACAGAAGC+AGG + tig0023943:49198-49217 None:intergenic 45.0%
GACCCCATTATAGCAAGTTC+TGG + tig0023943:49483-49502 None:intergenic 45.0%
! GGGAGATAGTCGTGTGATTT+TGG - tig0023943:49554-49573 Msa1412730:intron 45.0%
TGATTCACCAATACACAGGG+AGG + tig0023943:49835-49854 None:intergenic 45.0%
AGAACACCCTGATGATAGTC+AGG - tig0023943:50507-50526 Msa1412730:intron 45.0%
! AGGTGCACTTCCTACCATTT+TGG + tig0023943:50775-50794 None:intergenic 45.0%
TTAGCTATCACACATGACCC+AGG + tig0023943:50819-50838 None:intergenic 45.0%
CTCTTGTGGGTGTGTAGTAA+CGG - tig0023943:50846-50865 Msa1412730:intron 45.0%
ATTGAGGTCTAGGCTCCATT+TGG - tig0023943:50905-50924 Msa1412730:intron 45.0%
GCGTAGATCATTGGATTTGC+GGG - tig0023943:51306-51325 Msa1412730:CDS 45.0%
GGCCTCAGTGTTTCCAAATT+AGG + tig0023943:51591-51610 None:intergenic 45.0%
! GAAGGAGTGCAACTTAGGTA+AGG + tig0023943:51701-51720 None:intergenic 45.0%
! GTACAGAAGGAGTGCAACTT+AGG + tig0023943:51706-51725 None:intergenic 45.0%
AGTCGATGGTGAAGTACAGA+AGG + tig0023943:51719-51738 None:intergenic 45.0%
GGTCACTTGAAGAAAGTCGA+TGG + tig0023943:51733-51752 None:intergenic 45.0%
!! CAGAGGAGAGTACCAAGAAT+CGG + tig0023943:51754-51773 None:intergenic 45.0%
TTCTTGGTACTCTCCTCTGA+TGG - tig0023943:51755-51774 Msa1412730:CDS 45.0%
TCTTGGTACTCTCCTCTGAT+GGG - tig0023943:51756-51775 Msa1412730:CDS 45.0%
! TCTTTGGTTTCGATTTCGGG+AGG - tig0023943:52238-52257 Msa1412730:CDS 45.0%
! CTTTGGTTTCGATTTCGGGA+GGG - tig0023943:52239-52258 Msa1412730:CDS 45.0%
! TTTGGTTTCGATTTCGGGAG+GGG - tig0023943:52240-52259 Msa1412730:CDS 45.0%
! CTTCAGGTTAGAATCGGTTC+TGG + tig0023943:52301-52320 None:intergenic 45.0%
!! AGGCTCTAAATCCCAACTTC+AGG + tig0023943:52317-52336 None:intergenic 45.0%
CACGCACACACCAGTAAAAA+TGG + tig0023943:52605-52624 None:intergenic 45.0%
GATTGGACGGGATGAATTAC+TGG + tig0023943:52705-52724 None:intergenic 45.0%
TCTCTTGTAGAGGGATTGGA+CGG + tig0023943:52718-52737 None:intergenic 45.0%
! AGCACTTAGAGCATCCACAA+TGG - tig0023943:52924-52943 Msa1412730:CDS 45.0%
TCTTCCCCCCAAGAATTAGA+GGG - tig0023943:53008-53027 Msa1412730:CDS 45.0%
GTTGCCAATTATTTGGGGAG+TGG + tig0023943:53056-53075 None:intergenic 45.0%
!!! AGGCCGGTTTTGAAAACAGA+AGG + tig0023943:53112-53131 None:intergenic 45.0%
CGGCCTAATAACATAACTGC+TGG - tig0023943:53126-53145 Msa1412730:CDS 45.0%
AGGCAGCAGTAACTACCTAA+GGG + tig0023943:53189-53208 None:intergenic 45.0%
TAGGCAGCAGTAACTACCTA+AGG + tig0023943:53190-53209 None:intergenic 45.0%
ATGGTCAGCCACAACTTGAT+TGG + tig0023943:53290-53309 None:intergenic 45.0%
TAACTACCTACTCCGGTGTA+TGG + tig0023943:53309-53328 None:intergenic 45.0%
TGACTTTCCCTCCAATATGC+AGG - tig0023943:53536-53555 Msa1412730:five_prime_UTR 45.0%
TTCCCTCCAATATGCAGGAA+TGG - tig0023943:53541-53560 Msa1412730:five_prime_UTR 45.0%
TATTTACGCCGATCTCCATG+AGG + tig0023943:53590-53609 None:intergenic 45.0%
TGTCATGGTCGTTTCTTTGG+AGG - tig0023943:53625-53644 Msa1412730:five_prime_UTR 45.0%
GTCATGGTCGTTTCTTTGGA+GGG - tig0023943:53626-53645 Msa1412730:five_prime_UTR 45.0%
GGGAAGGATTTGGAGATCAT+CGG - tig0023943:53646-53665 Msa1412730:five_prime_UTR 45.0%
GGAAGGATTTGGAGATCATC+GGG - tig0023943:53647-53666 Msa1412730:five_prime_UTR 45.0%
! GGGCAGCAGTAAAGGATTTT+AGG + tig0023943:53898-53917 None:intergenic 45.0%
AAACACAAGGGCAGCAGTAA+AGG + tig0023943:53906-53925 None:intergenic 45.0%
TCCTATCAAAGGACACGGGA+CGG + tig0023943:47011-47030 None:intergenic 50.0%
! CAAGTAGGTTGAAGGGGACA+GGG + tig0023943:47195-47214 None:intergenic 50.0%
! ACAAGTAGGTTGAAGGGGAC+AGG + tig0023943:47196-47215 None:intergenic 50.0%
GGGTGGTTATGGGGTTTGAT+GGG - tig0023943:47532-47551 Msa1412730:intron 50.0%
AACGGCACTTCTCGTGTTGT+TGG - tig0023943:47641-47660 Msa1412730:intron 50.0%
GTGCCAATGTTTCCACAGCA+AGG - tig0023943:47957-47976 Msa1412730:intron 50.0%
! AACCAGAGTGCCATGTTTGC+TGG - tig0023943:47992-48011 Msa1412730:intron 50.0%
! GAACCTGCTGCTTCGTTTGA+GGG - tig0023943:48025-48044 Msa1412730:intron 50.0%
! ATGTCTGGTCCTTTGGAGAG+AGG - tig0023943:48115-48134 Msa1412730:intron 50.0%
GGTCCATTGGATAGAAGTGG+TGG - tig0023943:48148-48167 Msa1412730:intron 50.0%
ATGTCTGGGCCGATAGAGAA+GGG - tig0023943:48175-48194 Msa1412730:intron 50.0%
TTCTCTAAGCACTCCATGGG+TGG - tig0023943:48334-48353 Msa1412730:intron 50.0%
TTGCATCCAACTTCCACCCA+TGG + tig0023943:48350-48369 None:intergenic 50.0%
TGGGTGGAAGTTGGATGCAA+AGG - tig0023943:48350-48369 Msa1412730:intron 50.0%
AACCGGTTACTCAGTTGGCA+TGG - tig0023943:48383-48402 Msa1412730:intron 50.0%
CGGCCTACACTTAGTATCTC+TGG + tig0023943:48413-48432 None:intergenic 50.0%
CCACAGTTCCTAGAGATGTC+CGG + tig0023943:48433-48452 None:intergenic 50.0%
! CATAATCTGCAGTGGGCTCA+GGG - tig0023943:48493-48512 Msa1412730:intron 50.0%
ATTTCCGACCGACTGGATTC+TGG + tig0023943:48745-48764 None:intergenic 50.0%
ATCAGACATTTCCGACCGAC+TGG + tig0023943:48752-48771 None:intergenic 50.0%
ATGAAGGCCCGTCTACATCA+GGG - tig0023943:49118-49137 Msa1412730:CDS 50.0%
CCGTCTACATCAGGGGAAAA+TGG - tig0023943:49126-49145 Msa1412730:CDS 50.0%
! TCAGGGGAAAATGGAAGCAC+TGG - tig0023943:49135-49154 Msa1412730:CDS 50.0%
!! CAGGGGAAAATGGAAGCACT+GGG - tig0023943:49136-49155 Msa1412730:CDS 50.0%
AACAGCTTCGTGCTCCTTGT+TGG + tig0023943:49172-49191 None:intergenic 50.0%
! AGAGGCATACATGGAAACGG+CGG - tig0023943:49437-49456 Msa1412730:intron 50.0%
GGAAACGGCGGAGAATAATC+TGG - tig0023943:49449-49468 Msa1412730:intron 50.0%
GCTCTGTCAAGGATGACATG+AGG - tig0023943:49613-49632 Msa1412730:intron 50.0%
TAGTACGCATGGAGCTCGAT+AGG - tig0023943:49661-49680 Msa1412730:intron 50.0%
GGAGCTCGATAGGATTTCAG+AGG - tig0023943:49671-49690 Msa1412730:intron 50.0%
! CCTCTTCAATACTGGTGCTG+TGG + tig0023943:49800-49819 None:intergenic 50.0%
! CCACAGCACCAGTATTGAAG+AGG - tig0023943:49797-49816 Msa1412730:intron 50.0%
TCACCAATACACAGGGAGGA+GGG + tig0023943:49831-49850 None:intergenic 50.0%
TTCACCAATACACAGGGAGG+AGG + tig0023943:49832-49851 None:intergenic 50.0%
ACTGACCCTCTTCAAGAACC+CGG + tig0023943:50587-50606 None:intergenic 50.0%
AAGTGGTTGCCCATGTCACA+TGG - tig0023943:51804-51823 Msa1412730:CDS 50.0%
TGCCCATGTCACATGGTTCA+TGG - tig0023943:51811-51830 Msa1412730:CDS 50.0%
TATTGTGCAGGATCGCCTTC+TGG + tig0023943:51845-51864 None:intergenic 50.0%
! CAGGTTAGAATCGGTTCTGG+AGG + tig0023943:52298-52317 None:intergenic 50.0%
CTCTTGTAGAGGGATTGGAC+GGG + tig0023943:52717-52736 None:intergenic 50.0%
CTCTTCCCCCCAAGAATTAG+AGG - tig0023943:53007-53026 Msa1412730:CDS 50.0%
CAAGCCCTCTAATTCTTGGG+GGG + tig0023943:53015-53034 None:intergenic 50.0%
CCAAGCCCTCTAATTCTTGG+GGG + tig0023943:53016-53035 None:intergenic 50.0%
GCCAAGCCCTCTAATTCTTG+GGG + tig0023943:53017-53036 None:intergenic 50.0%
GGCCAAGCCCTCTAATTCTT+GGG + tig0023943:53018-53037 None:intergenic 50.0%
AGGCCAAGCCCTCTAATTCT+TGG + tig0023943:53019-53038 None:intergenic 50.0%
AGTTGTGGCTGACCATACAC+CGG - tig0023943:53294-53313 Msa1412730:five_prime_UTR 50.0%
! TGGTCGTTTCTTTGGAGGGA+AGG - tig0023943:53630-53649 Msa1412730:five_prime_UTR 50.0%
ACCGTCCCGTGTCCTTTGAT+AGG - tig0023943:47007-47026 Msa1412730:three_prime_UTR 55.0%
GGGGTGGTTATGGGGTTTGA+TGG - tig0023943:47531-47550 Msa1412730:intron 55.0%
GTTTCCACAGCAAGGACAGG+TGG - tig0023943:47965-47984 Msa1412730:intron 55.0%
CACCAGCAAACATGGCACTC+TGG + tig0023943:47997-48016 None:intergenic 55.0%
! GGAACCTGCTGCTTCGTTTG+AGG - tig0023943:48024-48043 Msa1412730:intron 55.0%
GTTCCCTCAAACGAAGCAGC+AGG + tig0023943:48031-48050 None:intergenic 55.0%
TTCAAAGGTCCAGAACCGCG+TGG + tig0023943:48088-48107 None:intergenic 55.0%
!! CGCGGTTCTGGACCTTTGAA+TGG - tig0023943:48088-48107 Msa1412730:intron 55.0%
GAGGCAAAGCCTCTCTCCAA+AGG + tig0023943:48127-48146 None:intergenic 55.0%
TTGGAGAGAGGCTTTGCCTC+AGG - tig0023943:48127-48146 Msa1412730:intron 55.0%
AGGCTTTGCCTCAGGTCCAT+TGG - tig0023943:48135-48154 Msa1412730:intron 55.0%
CATGTCTGGGCCGATAGAGA+AGG - tig0023943:48174-48193 Msa1412730:intron 55.0%
TGTCTGGGCCGATAGAGAAG+GGG - tig0023943:48176-48195 Msa1412730:intron 55.0%
! CGCAAGTGGTGCCGAAAAGT+TGG + tig0023943:48236-48255 None:intergenic 55.0%
AGCACTCCATGGGTGGAAGT+TGG - tig0023943:48341-48360 Msa1412730:intron 55.0%
GGCCATGCCAACTGAGTAAC+CGG + tig0023943:48388-48407 None:intergenic 55.0%
AGTGTAGGCCGGACATCTCT+AGG - tig0023943:48422-48441 Msa1412730:intron 55.0%
! CCGGACATCTCTAGGAACTG+TGG - tig0023943:48430-48449 Msa1412730:intron 55.0%
! GCATAATCTGCAGTGGGCTC+AGG - tig0023943:48492-48511 Msa1412730:intron 55.0%
AGGGAAAGGCCGGTGAAGAT+AGG - tig0023943:48512-48531 Msa1412730:intron 55.0%
GGGAAAGGCCGGTGAAGATA+GGG - tig0023943:48513-48532 Msa1412730:intron 55.0%
!! CCGACTGGATTCTGGAGCAA+CGG + tig0023943:48737-48756 None:intergenic 55.0%
CCGTTGCTCCAGAATCCAGT+CGG - tig0023943:48734-48753 Msa1412730:intron 55.0%
TGCTCCAGAATCCAGTCGGT+CGG - tig0023943:48738-48757 Msa1412730:intron 55.0%
GATGAAGGCCCGTCTACATC+AGG - tig0023943:49117-49136 Msa1412730:CDS 55.0%
TGAAGGCCCGTCTACATCAG+GGG - tig0023943:49119-49138 Msa1412730:CDS 55.0%
ACCAATACACAGGGAGGAGG+GGG + tig0023943:49829-49848 None:intergenic 55.0%
CACCAATACACAGGGAGGAG+GGG + tig0023943:49830-49849 None:intergenic 55.0%
! GTTACCAGAGCATTTGGCGC+CGG - tig0023943:50565-50584 Msa1412730:intron 55.0%
! TTACCAGAGCATTTGGCGCC+GGG - tig0023943:50566-50585 Msa1412730:intron 55.0%
ACTGGTGTGTGCGTGCAATC+TGG - tig0023943:52610-52629 Msa1412730:CDS 55.0%
CCCCCAAGAATTAGAGGGCT+TGG - tig0023943:53013-53032 Msa1412730:CDS 55.0%
TCCACAGCAAGGACAGGTGG+CGG - tig0023943:47968-47987 Msa1412730:intron 60.0%
CCTTTGCAGCCAGTTCCACG+CGG - tig0023943:48070-48089 Msa1412730:intron 60.0%
GTCTGGGCCGATAGAGAAGG+GGG - tig0023943:48177-48196 Msa1412730:intron 60.0%
! TTTTCGGCACCACTTGCGCG+TGG - tig0023943:48238-48257 Msa1412730:intron 60.0%
! TCTGCAGTGGGCTCAGGGAA+AGG - tig0023943:48498-48517 Msa1412730:intron 60.0%
TCCCCCTCCTCCCTGTGTAT+TGG - tig0023943:49825-49844 Msa1412730:intron 60.0%
! TTGGCGCCGGGTTCTTGAAG+AGG - tig0023943:50578-50597 Msa1412730:intron 60.0%
! TGGCGCCGGGTTCTTGAAGA+GGG - tig0023943:50579-50598 Msa1412730:intron 60.0%
GGCTGACCATACACCGGAGT+AGG - tig0023943:53300-53319 Msa1412730:five_prime_UTR 60.0%
ACCGCCACCTGTCCTTGCTG+TGG + tig0023943:47972-47991 None:intergenic 65.0%
CCGCGTGGAACTGGCTGCAA+AGG + tig0023943:48073-48092 None:intergenic 65.0%
CAGCCAGTTCCACGCGGTTC+TGG - tig0023943:48076-48095 Msa1412730:intron 65.0%
GGTCCAGAACCGCGTGGAAC+TGG + tig0023943:48082-48101 None:intergenic 65.0%
CACCACTTGCGCGTGGTCGT+AGG - tig0023943:48245-48264 Msa1412730:intron 65.0%
CTCCTACGACCACGCGCAAG+TGG + tig0023943:48250-48269 None:intergenic 65.0%
CACTTGCGCGTGGTCGTAGG+AGG - tig0023943:48248-48267 Msa1412730:intron 65.0%
! CAGTGGGCTCAGGGAAAGGC+CGG - tig0023943:48502-48521 Msa1412730:intron 65.0%
GAACCCGGCGCCAAATGCTC+TGG + tig0023943:50572-50591 None:intergenic 65.0%
TGTGAGTATGCGCGCGCGTG+TGG + tig0023943:52550-52569 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
tig0023943 gene 46983 53926 46983 ID=Msa1412730;Name=Msa1412730
tig0023943 mRNA 46983 53926 46983 ID=Msa1412730-mRNA-1;Parent=Msa1412730;Name=Msa1412730-mRNA-1;_AED=0.04;_eAED=0.04;_QI=652|1|1|1|1|1|4|253|892
tig0023943 exon 46983 47351 46983 ID=Msa1412730-mRNA-1:exon:20760;Parent=Msa1412730-mRNA-1
tig0023943 exon 49004 49268 49004 ID=Msa1412730-mRNA-1:exon:20759;Parent=Msa1412730-mRNA-1
tig0023943 exon 50309 50422 50309 ID=Msa1412730-mRNA-1:exon:20758;Parent=Msa1412730-mRNA-1
tig0023943 exon 51091 53926 51091 ID=Msa1412730-mRNA-1:exon:20757;Parent=Msa1412730-mRNA-1
tig0023943 five_prime_UTR 53275 53926 53275 ID=Msa1412730-mRNA-1:five_prime_utr;Parent=Msa1412730-mRNA-1
tig0023943 CDS 51091 53274 51091 ID=Msa1412730-mRNA-1:cds;Parent=Msa1412730-mRNA-1
tig0023943 CDS 50309 50422 50309 ID=Msa1412730-mRNA-1:cds;Parent=Msa1412730-mRNA-1
tig0023943 CDS 49004 49268 49004 ID=Msa1412730-mRNA-1:cds;Parent=Msa1412730-mRNA-1
tig0023943 CDS 47236 47351 47236 ID=Msa1412730-mRNA-1:cds;Parent=Msa1412730-mRNA-1
tig0023943 three_prime_UTR 46983 47235 46983 ID=Msa1412730-mRNA-1:three_prime_utr;Parent=Msa1412730-mRNA-1
Gene Sequence

>Msa1412730

ATGGGTAACGGCACTTCTCGTGTTGTTGGTTGTTTAGTGCCATTCAATGGTAAAAATGGTGTTGATTTGGAGTTTTTAGAGCCATTAGATGAAGGTTTAGGACATTCTTTTTGTTATGTGAGACCAACTATGTTTGAATCTCCTGCTATTAGTCCATCGAATTCTGAGAGGTTTACCGTTGATTCAAGCACTCTTGATTCTGAAACCTTGAGTGGTTCGTTTAGGCATGATAGTATGGAGCATTCTAATTCTTCTGGTTTACACAAGCAGGGTAAGAATTTCCCTGAAACTACGTTTAAGACGATTTCAGGGGCTTCTGTTAGTGCCAATGTTTCCACAGCAAGGACAGGTGGCGGTAACCAGAGTGCCATGTTTGCTGGTGATTTCTTGGAACCTGCTGCTTCGTTTGAGGGAACTGCTTCGTTTGCTGCAATTCCTTTGCAGCCAGTTCCACGCGGTTCTGGACCTTTGAATGGTTTTATGTCTGGTCCTTTGGAGAGAGGCTTTGCCTCAGGTCCATTGGATAGAAGTGGTGGTTTCATGTCTGGGCCGATAGAGAAGGGGGTTATGTCAGGTCCTCTTGATGACACTGATAAATCCAACTTTTCGGCACCACTTGCGCGTGGTCGTAGGAGGCCGCGTCTACAACATCTCATGAGAAGTGTTAGTGGACCGGTGAAGAACACGTTTTCTCGAACATTCTCTAAGCACTCCATGGGTGGAAGTTGGATGCAAAGGTTGTTCTTTCAACCGGTTACTCAGTTGGCATGGCCTTCCAGAGATACTAAGTGTAGGCCGGACATCTCTAGGAACTGTGGTATTGATGTTGTACCGTATGAAGCTGAGTATAAACACACGCATAATCTGCAGTGGGCTCAGGGAAAGGCCGGTGAAGATAGGGTTCATGTAGTTCTTTCTGAAGAACAAGGGTGGTTGTTTATTGGGATATATGACGGTTTTAGTGGACCAGATGCACCTGATTTTTTGATGAGCCATCTTTATAGATTTCTAGACAAAGAATTGGAAGGTTTACTTTGGGATTATGAAGATAATCCTGTAGATTCCCTTAAACCCGAAGTCCCTGAAACTTTAAAAGCTACCGTTGCTCCAGAATCCAGTCGGTCGGAAATGTCTGATACTCATACTAATTCTAATCAAGAATGTTTTGAAGCTTGTTCTGGTCCTGAATTAATCAAGGATCAATCATTTAACAATGAGATAGTTGAGGAAAAGGCTGAAGTTAATGTAAATGTTGAACACCAGTTATCTAATTGTGGAAGTAGCTTGTCTACTGTTTCTAATTCTGTTCAGCATGAAAAGTTGACTGGAAAAGGTAAAAGAAGTTTAAGGCTTTATGAGCTACTTCAAATGGAATCTTGGGATGATCAATGTAATGATTCCTCAGTTCCGATGGAGTCAATACTAGATGAGCATACAAGACCTTGCTCGTCTACTGTAAGAGAAGATGGCTCTAAACATCAGGATGAAGGCCCGTCTACATCAGGGGAAAATGGAAGCACTGGGTTTGGTTCAACCAACAAGGAGCACGAAGCTGTTTTTCCTGCTTCTGTATCAAGGCAGAATTCAAAAAAGTCATTTATCGGTGCAAAAATTAAAAAAATGTACAGGAAGCCAAAGTCCTTGTGTAAGAAACTCTTTCCTTGGAGTTATGATTGGCATAGGGAAGAAAGTAGTGTTGATGAGAAAATATTAGAAGCCTCTGGACCTATTAGAAAATGCAGGTCTGGAGTAGATCATAACGCAGTTTTAACAGCAATGGCTCGAGCTCTTGAAAGAACAGAAGAGGCATACATGGAAACGGCGGAGAATAATCTGGACAAAAATCCAGAACTTGCTATAATGGGGTCATGTGTTCTAGTGATGTTGATGAAGGATCAAGATGTTTATGTCATGAATCTGGGAGATAGTCGTGTGATTTTGGCTCAAGAAAGATCAAACGATCGCCATCCTAATTCAAGCTCTGTCAAGGATGACATGAGGCATAGAAATAGATCTAGAGAGTCATTAGTACGCATGGAGCTCGATAGGATTTCAGAGGAGTCTCCAATTCACAACCATAACAATCATGTTATCAAGATGAATAAAAACCGCGAGATATCATTTTGCAAATTAAAAATGAGGGCTCTGCAGCTTTCTACAGACCACAGCACCAGTATTGAAGAGGAAGTTTCAAGAATAAGAGCAGAACACCCTGATGATAGTCAGGCCATATTGAATGATCGAGTGAAAGGAAATTTAAAAGTTACCAGAGCATTTGGCGCCGGGTTCTTGAAGAGGCCGTCTTTTAACGAAGCTCTACTCGAGGTGTTTCAAGTTAAATATATCGGCTCTGCTCCTTACCTAAGTTGCACTCCTTCTGTACTTCACCATCGACTTTCTTCAAGTGACCGATTCTTGGTACTCTCCTCTGATGGGCTTTACCAATATTTCAGCAATGAAGAAGTGGTTGCCCATGTCACATGGTTCATGGAAAATGTTCCAGAAGGCGATCCTGCACAATACCTTATTGCAGAGCTTCTCTTCTGCGCTGCTAAAAAGAATGGAATGGATTTTCATGAACTGCTTGATATTCCTCATGGAGATCGGCGTAAATATCACGATGATGTATCTGTCATGGTCGTTTCTTTGGAGGGAAGGATTTGGAGATCATCGGGATAA
Protein sequence

>Msa1412730

MGNGTSRVVGCLVPFNGKNGVDLEFLEPLDEGLGHSFCYVRPTMFESPAISPSNSERFTVDSSTLDSETLSGSFRHDSMEHSNSSGLHKQGKNFPETTFKTISGASVSANVSTARTGGGNQSAMFAGDFLEPAASFEGTASFAAIPLQPVPRGSGPLNGFMSGPLERGFASGPLDRSGGFMSGPIEKGVMSGPLDDTDKSNFSAPLARGRRRPRLQHLMRSVSGPVKNTFSRTFSKHSMGGSWMQRLFFQPVTQLAWPSRDTKCRPDISRNCGIDVVPYEAEYKHTHNLQWAQGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYRFLDKELEGLLWDYEDNPVDSLKPEVPETLKATVAPESSRSEMSDTHTNSNQECFEACSGPELIKDQSFNNEIVEEKAEVNVNVEHQLSNCGSSLSTVSNSVQHEKLTGKGKRSLRLYELLQMESWDDQCNDSSVPMESILDEHTRPCSSTVREDGSKHQDEGPSTSGENGSTGFGSTNKEHEAVFPASVSRQNSKKSFIGAKIKKMYRKPKSLCKKLFPWSYDWHREESSVDEKILEASGPIRKCRSGVDHNAVLTAMARALERTEEAYMETAENNLDKNPELAIMGSCVLVMLMKDQDVYVMNLGDSRVILAQERSNDRHPNSSSVKDDMRHRNRSRESLVRMELDRISEESPIHNHNNHVIKMNKNREISFCKLKMRALQLSTDHSTSIEEEVSRIRAEHPDDSQAILNDRVKGNLKVTRAFGAGFLKRPSFNEALLEVFQVKYIGSAPYLSCTPSVLHHRLSSSDRFLVLSSDGLYQYFSNEEVVAHVTWFMENVPEGDPAQYLIAELLFCAAKKNGMDFHELLDIPHGDRRKYHDDVSVMVVSLEGRIWRSSG*