Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1157860 | XP_003588923.3 | 97.406 | 347 | 9 | 0 | 1 | 347 | 1 | 347 | 0.0 | 704 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1157860 | sp|Q9S7X6|ACL5_ARATH | 69.322 | 339 | 99 | 2 | 11 | 346 | 1 | 337 | 1.01e-176 | 496 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1157860 | B7FII8 | 97.406 | 347 | 9 | 0 | 1 | 347 | 1 | 347 | 0.0 | 704 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0029520 | Msa1157860 | 0.800260 | 1.566488e-48 | -8.615850e-47 |
| Msa0035050 | Msa1157860 | 0.849470 | 3.168456e-60 | -8.615850e-47 |
| Msa0081270 | Msa1157860 | -0.811402 | 7.127212e-51 | -8.615850e-47 |
| Msa0093950 | Msa1157860 | 0.840635 | 7.723708e-58 | -8.615850e-47 |
| Msa0094170 | Msa1157860 | 0.836264 | 1.035962e-56 | -8.615850e-47 |
| Msa0099530 | Msa1157860 | 0.902796 | 6.716031e-79 | -8.615850e-47 |
| Msa0622480 | Msa1157860 | 0.807287 | 5.442048e-50 | -8.615850e-47 |
| Msa0638010 | Msa1157860 | 0.812704 | 3.708770e-51 | -8.615850e-47 |
| Msa0644760 | Msa1157860 | 0.811394 | 7.157358e-51 | -8.615850e-47 |
| Msa0646410 | Msa1157860 | 0.822496 | 2.296526e-53 | -8.615850e-47 |
| Msa0707170 | Msa1157860 | 0.807835 | 4.163610e-50 | -8.615850e-47 |
| Msa0833950 | Msa1157860 | 0.811359 | 7.284656e-51 | -8.615850e-47 |
| Msa0136870 | Msa1157860 | 0.830078 | 3.596079e-55 | -8.615850e-47 |
| Msa0138990 | Msa1157860 | 0.800153 | 1.647050e-48 | -8.615850e-47 |
| Msa0148140 | Msa1157860 | 0.901086 | 3.822183e-78 | -8.615850e-47 |
| Msa0178840 | Msa1157860 | 0.816770 | 4.658411e-52 | -8.615850e-47 |
| Msa0187590 | Msa1157860 | 0.850781 | 1.360145e-60 | -8.615850e-47 |
| Msa0194190 | Msa1157860 | 0.802508 | 5.425932e-49 | -8.615850e-47 |
| Msa0220400 | Msa1157860 | 0.831970 | 1.234396e-55 | -8.615850e-47 |
| Msa0225790 | Msa1157860 | 0.838218 | 3.277358e-57 | -8.615850e-47 |
| Msa0383870 | Msa1157860 | 0.848477 | 5.977697e-60 | -8.615850e-47 |
| Msa0397420 | Msa1157860 | 0.804143 | 2.488289e-49 | -8.615850e-47 |
| Msa0403470 | Msa1157860 | 0.812571 | 3.964226e-51 | -8.615850e-47 |
| Msa0480090 | Msa1157860 | 0.813910 | 2.014775e-51 | -8.615850e-47 |
| Msa1028860 | Msa1157860 | 0.815328 | 9.778530e-52 | -8.615850e-47 |
| Msa1067980 | Msa1157860 | 0.831772 | 1.381226e-55 | -8.615850e-47 |
| Msa1079720 | Msa1157860 | 0.818650 | 1.755175e-52 | -8.615850e-47 |
| Msa1080610 | Msa1157860 | 0.823238 | 1.542656e-53 | -8.615850e-47 |
| Msa1080680 | Msa1157860 | 0.822006 | 2.983705e-53 | -8.615850e-47 |
| Msa1085610 | Msa1157860 | 0.807433 | 5.067428e-50 | -8.615850e-47 |
| Msa0260580 | Msa1157860 | 0.845402 | 4.154210e-59 | -8.615850e-47 |
| Msa0260640 | Msa1157860 | 0.839174 | 1.855669e-57 | -8.615850e-47 |
| Msa0261660 | Msa1157860 | 0.822075 | 2.875434e-53 | -8.615850e-47 |
| Msa0299530 | Msa1157860 | 0.832715 | 8.069226e-56 | -8.615850e-47 |
| Msa1124530 | Msa1157860 | 0.824428 | 8.115719e-54 | -8.615850e-47 |
| Msa1126320 | Msa1157860 | 0.806313 | 8.739713e-50 | -8.615850e-47 |
| Msa1129300 | Msa1157860 | 0.856126 | 3.971709e-62 | -8.615850e-47 |
| Msa1157860 | Msa1167150 | 0.824158 | 9.390290e-54 | -8.615850e-47 |
| Msa1157860 | Msa1168050 | 0.807612 | 4.643379e-50 | -8.615850e-47 |
| Msa1157860 | Msa1208450 | 0.820792 | 5.688332e-53 | -8.615850e-47 |
| Msa1157860 | Msa1258030 | 0.821225 | 4.520954e-53 | -8.615850e-47 |
| Msa1157860 | Msa1298390 | 0.829486 | 5.011447e-55 | -8.615850e-47 |
| Msa1157860 | Msa1325560 | 0.808308 | 3.301026e-50 | -8.615850e-47 |
| Msa1157860 | Msa1364350 | 0.833873 | 4.153537e-56 | -8.615850e-47 |
| Msa1157860 | Msa1375970 | 0.800123 | 1.670528e-48 | -8.615850e-47 |
| Msa1157860 | Msa1384760 | 0.820209 | 7.741471e-53 | -8.615850e-47 |
| Msa1157860 | Msa1388030 | 0.801415 | 9.101629e-49 | -8.615850e-47 |
| Msa1157860 | Msa1412730 | -0.807015 | 6.213967e-50 | -8.615850e-47 |
| Msa1157860 | Msa1416440 | -0.813574 | 2.389340e-51 | -8.615850e-47 |
| Msa0500610 | Msa1157860 | 0.829121 | 6.146389e-55 | -8.615850e-47 |
| Msa0500700 | Msa1157860 | 0.815739 | 7.922689e-52 | -8.615850e-47 |
| Msa0512950 | Msa1157860 | 0.806230 | 9.099321e-50 | -8.615850e-47 |
| Msa0548650 | Msa1157860 | 0.818224 | 2.191718e-52 | -8.615850e-47 |
| Msa0559450 | Msa1157860 | 0.822981 | 1.770967e-53 | -8.615850e-47 |
| Msa0576080 | Msa1157860 | 0.806049 | 9.935442e-50 | -8.615850e-47 |
| Msa0576120 | Msa1157860 | 0.805830 | 1.104754e-49 | -8.615850e-47 |
| Msa0968470 | Msa1157860 | 0.827187 | 1.796441e-54 | -8.615850e-47 |
| Msa0979020 | Msa1157860 | 0.808294 | 3.323552e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1157860 | MtrunA17_Chr1g0150851 | 97.406 | 347 | 9 | 0 | 1 | 347 | 1 | 347 | 0.0 | 704 |
| Msa1157860 | MtrunA17_Chr5g0394371 | 68.106 | 301 | 96 | 0 | 42 | 342 | 25 | 325 | 1.53e-156 | 442 |
| Msa1157860 | MtrunA17_Chr3g0136181 | 79.293 | 198 | 41 | 0 | 149 | 346 | 30 | 227 | 5.78e-119 | 343 |
| Msa1157860 | MtrunA17_Chr5g0413701 | 33.212 | 274 | 164 | 10 | 21 | 285 | 33 | 296 | 1.42e-38 | 140 |
| Msa1157860 | MtrunA17_Chr8g0365071 | 31.200 | 250 | 156 | 8 | 44 | 285 | 54 | 295 | 3.16e-35 | 131 |
| Msa1157860 | MtrunA17_Chr3g0117881 | 32.203 | 177 | 116 | 3 | 57 | 232 | 59 | 232 | 5.38e-25 | 103 |
| Msa1157860 | MtrunA17_Chr3g0126551 | 28.723 | 282 | 190 | 8 | 56 | 332 | 83 | 358 | 1.96e-23 | 99.4 |
| Msa1157860 | MtrunA17_Chr1g0158851 | 29.885 | 261 | 175 | 6 | 56 | 314 | 88 | 342 | 1.44e-21 | 94.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1157860 | AT5G19530.1 | 69.322 | 339 | 99 | 2 | 11 | 346 | 1 | 337 | 1.03e-177 | 496 |
| Msa1157860 | AT5G19530.2 | 70.769 | 325 | 93 | 1 | 22 | 346 | 8 | 330 | 1.11e-174 | 488 |
| Msa1157860 | AT1G23820.2 | 34.667 | 225 | 139 | 6 | 56 | 277 | 105 | 324 | 6.44e-40 | 144 |
| Msa1157860 | AT1G23820.1 | 34.419 | 215 | 134 | 5 | 56 | 268 | 61 | 270 | 3.25e-37 | 137 |
| Msa1157860 | AT1G70310.1 | 31.600 | 250 | 155 | 8 | 44 | 285 | 51 | 292 | 1.43e-35 | 132 |
| Msa1157860 | AT5G53120.1 | 31.128 | 257 | 162 | 6 | 56 | 310 | 84 | 327 | 1.84e-23 | 100 |
| Msa1157860 | AT5G53120.4 | 31.128 | 257 | 162 | 6 | 56 | 310 | 84 | 327 | 1.84e-23 | 100 |
| Msa1157860 | AT5G53120.2 | 31.128 | 257 | 162 | 6 | 56 | 310 | 84 | 327 | 1.84e-23 | 100 |
| Msa1157860 | AT5G53120.5 | 31.128 | 257 | 162 | 6 | 56 | 310 | 84 | 327 | 1.84e-23 | 100 |
| Msa1157860 | AT5G53120.3 | 31.128 | 257 | 162 | 6 | 56 | 310 | 84 | 327 | 1.84e-23 | 100 |
| Msa1157860 | AT5G53120.7 | 31.128 | 257 | 162 | 6 | 56 | 310 | 101 | 344 | 2.33e-23 | 100 |
| Msa1157860 | AT5G53120.6 | 28.169 | 284 | 162 | 8 | 56 | 310 | 84 | 354 | 9.33e-20 | 89.7 |
Find 144 sgRNAs with CRISPR-Local
Find 316 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAACGTTTAAAATTGATTT+AGG | 0.111366 | 7_4:+46902397 | None:intergenic |
| CTGAAGCCATTATTGATTAT+TGG | 0.166298 | 7_4:-46901884 | Msa1157860:three_prime_UTR |
| AACGAACCTGTTGAGTTTAA+AGG | 0.204551 | 7_4:+46907013 | None:intergenic |
| TCATTAACGTAAAACATTTC+TGG | 0.211926 | 7_4:+46907137 | None:intergenic |
| GAGTCATTTCCTTTCCTTTA+GGG | 0.233373 | 7_4:+46902945 | None:intergenic |
| AAAATACCTGGTTGCAAATA+AGG | 0.242099 | 7_4:-46904437 | Msa1157860:CDS |
| GCCAAGTTGATGAAACAATT+TGG | 0.248516 | 7_4:+46902534 | None:intergenic |
| TTGTGGGTGGCTTGGGTTAG+TGG | 0.257951 | 7_4:-46901927 | Msa1157860:three_prime_UTR |
| TTAGTCCAGATTTGACTTTA+AGG | 0.259268 | 7_4:-46902885 | Msa1157860:three_prime_UTR |
| ACATGGTTTGGTTGAACTTC+AGG | 0.282517 | 7_4:+46907098 | None:intergenic |
| AGAATTGAAGCAAGAATAAA+AGG | 0.285461 | 7_4:-46903212 | Msa1157860:CDS |
| TTTAACTAAGTTCTCTTAAC+AGG | 0.285839 | 7_4:-46902257 | Msa1157860:three_prime_UTR |
| TCCACAGCATCAATCAATAT+TGG | 0.287518 | 7_4:+46903245 | None:intergenic |
| TGTTGTTCTTACAGCTATAT+TGG | 0.300493 | 7_4:+46902205 | None:intergenic |
| CCCCAAGACGGTGTTTATAA+TGG | 0.300655 | 7_4:-46905495 | Msa1157860:CDS |
| CCCATTATAAACACCGTCTT+GGG | 0.300710 | 7_4:+46905494 | None:intergenic |
| GCCATTATTGATTATTGGTT+TGG | 0.302420 | 7_4:-46901879 | Msa1157860:three_prime_UTR |
| CTCTTGGATACAAAGCGTTT+TGG | 0.309876 | 7_4:-46906752 | Msa1157860:CDS |
| AGAGTCATTTCCTTTCCTTT+AGG | 0.310534 | 7_4:+46902944 | None:intergenic |
| GAACGTTTAAAATTGATTTA+GGG | 0.321829 | 7_4:+46902398 | None:intergenic |
| TGATTCATGGGGATGGGTTA+TGG | 0.329159 | 7_4:-46903364 | Msa1157860:intron |
| TGATATCATTGTTGGAGATT+TGG | 0.339425 | 7_4:-46904203 | Msa1157860:CDS |
| GTTGTTCTTACAGCTATATT+GGG | 0.346937 | 7_4:+46902206 | None:intergenic |
| GTCTTCTTTGCTTGTGGAAA+GGG | 0.349407 | 7_4:-46901993 | Msa1157860:three_prime_UTR |
| ATTGGATGTGAGATGGAAAA+TGG | 0.349509 | 7_4:-46901772 | Msa1157860:three_prime_UTR |
| CTTCACAACTTTCTCATAGA+AGG | 0.351490 | 7_4:+46904135 | None:intergenic |
| TACCATCATTTGCTGATTCA+TGG | 0.351693 | 7_4:-46903377 | Msa1157860:CDS |
| ATGCCATTGTCAGTGAGTTT+AGG | 0.356612 | 7_4:+46904112 | None:intergenic |
| ACCGTTCAATCTTAAATAAA+TGG | 0.363219 | 7_4:+46902435 | None:intergenic |
| GAGAAGTTTGATATCATTGT+TGG | 0.364473 | 7_4:-46904211 | Msa1157860:CDS |
| ACCAAACCAATAATCAATAA+TGG | 0.366810 | 7_4:+46901878 | None:intergenic |
| ATAGTTACCTAGATAAAATA+AGG | 0.367155 | 7_4:-46902744 | Msa1157860:three_prime_UTR |
| GCTATATTGGGTGCTGTTGT+TGG | 0.379016 | 7_4:+46902218 | None:intergenic |
| ATCAACTTGGCTTGAGTAGT+AGG | 0.380131 | 7_4:-46902522 | Msa1157860:three_prime_UTR |
| ACTTCAAAATCCAACCTTGT+TGG | 0.385727 | 7_4:+46902032 | None:intergenic |
| GTTGAAGAAATGTGTGGAAT+TGG | 0.387818 | 7_4:-46901790 | Msa1157860:three_prime_UTR |
| TTCTTATAGGCTGGACCAGC+AGG | 0.390978 | 7_4:-46903817 | Msa1157860:intron |
| AACCTGATGAATTGTGTCTA+AGG | 0.394713 | 7_4:-46902604 | Msa1157860:three_prime_UTR |
| AATGGTCCTTTAAACTCAAC+AGG | 0.400428 | 7_4:-46907019 | Msa1157860:intron |
| ATACTTAGGTAAAGTTCTAT+AGG | 0.406545 | 7_4:-46902718 | Msa1157860:three_prime_UTR |
| ATACCAGGACATTGCTCTCT+TGG | 0.416640 | 7_4:-46906768 | Msa1157860:CDS |
| TGCTCTATCTAGACGGTGCT+TGG | 0.419252 | 7_4:-46903184 | Msa1157860:CDS |
| AATAATATAGCGCAATACTT+TGG | 0.419360 | 7_4:+46902906 | None:intergenic |
| ATTGACCTTAAAGTCAAATC+TGG | 0.420822 | 7_4:+46902880 | None:intergenic |
| CCCAAGACGGTGTTTATAAT+GGG | 0.420987 | 7_4:-46905494 | Msa1157860:CDS |
| TCCAAATTGTTTCATCAACT+TGG | 0.421237 | 7_4:-46902535 | Msa1157860:three_prime_UTR |
| ATTGATTGATGCTGTGGAAA+TGG | 0.421971 | 7_4:-46903240 | Msa1157860:CDS |
| ACTAGTGTCTTCTTTGCTTG+TGG | 0.430477 | 7_4:-46901999 | Msa1157860:three_prime_UTR |
| CATTTGCTGATTCATGGGGA+TGG | 0.430597 | 7_4:-46903371 | Msa1157860:CDS |
| ATATGAGGGTTGGATATTAG+TGG | 0.433123 | 7_4:-46901812 | Msa1157860:three_prime_UTR |
| GATAATGCTAGATTTATTCC+TGG | 0.440598 | 7_4:-46902987 | Msa1157860:CDS |
| CATGGTTTGGTTGAACTTCA+GGG | 0.443362 | 7_4:+46907099 | None:intergenic |
| TGATTCTTCCACATGGTATG+AGG | 0.443438 | 7_4:-46907063 | Msa1157860:CDS |
| TGCCTTAGACACAATTCATC+AGG | 0.445100 | 7_4:+46902602 | None:intergenic |
| CCAGATGTTGCTCATGCAGC+TGG | 0.445643 | 7_4:+46902128 | None:intergenic |
| TATACACAACACCATAAAAC+AGG | 0.448583 | 7_4:-46903764 | Msa1157860:CDS |
| TCAACGTTGTTGACATGGTT+TGG | 0.458692 | 7_4:+46907086 | None:intergenic |
| GATGCATGGTTGGATATATG+AGG | 0.459338 | 7_4:-46901827 | Msa1157860:three_prime_UTR |
| TGTCTTCTTTGCTTGTGGAA+AGG | 0.459779 | 7_4:-46901994 | Msa1157860:three_prime_UTR |
| TTTGCTTGTGGAAAGGGCAA+TGG | 0.463285 | 7_4:-46901987 | Msa1157860:three_prime_UTR |
| AATATTCCTGCAGGAGGTGG+TGG | 0.466008 | 7_4:-46904470 | Msa1157860:intron |
| TCTCTTAACAGGATCAAAGT+TGG | 0.467747 | 7_4:-46902246 | Msa1157860:three_prime_UTR |
| ATATAGGCGTTGATGCTTGA+TGG | 0.475521 | 7_4:-46906392 | Msa1157860:intron |
| TGCTTGAATTCCAACAAGGT+TGG | 0.477724 | 7_4:-46902042 | Msa1157860:three_prime_UTR |
| GACTTTAAGGTCAATCTGTA+GGG | 0.481181 | 7_4:-46902872 | Msa1157860:three_prime_UTR |
| TTCAAGAAGGGTGTGGTGGA+AGG | 0.483812 | 7_4:-46901963 | Msa1157860:three_prime_UTR |
| TGACTTTAAGGTCAATCTGT+AGG | 0.485191 | 7_4:-46902873 | Msa1157860:three_prime_UTR |
| ACCATCATTTGCTGATTCAT+GGG | 0.486333 | 7_4:-46903376 | Msa1157860:CDS |
| ATAAAATAAGGAAAATACTT+AGG | 0.486942 | 7_4:-46902732 | Msa1157860:three_prime_UTR |
| TGGTGAAGGTTCAGCAGCTA+GGG | 0.487536 | 7_4:-46905468 | Msa1157860:CDS |
| TCCCATTATAAACACCGTCT+TGG | 0.488858 | 7_4:+46905493 | None:intergenic |
| TTGCAATTGTTTCTAATACA+AGG | 0.489713 | 7_4:+46902351 | None:intergenic |
| CCAGCTGCATGAGCAACATC+TGG | 0.490868 | 7_4:-46902128 | Msa1157860:three_prime_UTR |
| ACAATTGCAAACAAATCAAA+AGG | 0.493565 | 7_4:-46902338 | Msa1157860:three_prime_UTR |
| CATTTCTGGTGCCTCTCCCA+TGG | 0.496543 | 7_4:+46907151 | None:intergenic |
| TAAACGTTCTCGGTAATTGT+TGG | 0.498330 | 7_4:-46902384 | Msa1157860:three_prime_UTR |
| TTTATAATGGGAGGTGGTGA+AGG | 0.498635 | 7_4:-46905482 | Msa1157860:CDS |
| TATTCATGATGGTAGATGAA+TGG | 0.501719 | 7_4:+46903159 | None:intergenic |
| CCCATTTGGTGCAGATGTGG+TGG | 0.502068 | 7_4:-46903415 | Msa1157860:intron |
| GGCTGAATTAGAGAAAAGAA+AGG | 0.510493 | 7_4:-46904233 | Msa1157860:CDS |
| GCTAGATTTATTCCTGGTCA+TGG | 0.513206 | 7_4:-46902981 | Msa1157860:CDS |
| ATTTGCTGATTCATGGGGAT+GGG | 0.513753 | 7_4:-46903370 | Msa1157860:CDS |
| ACCATTTATTTAAGATTGAA+CGG | 0.515483 | 7_4:-46902436 | Msa1157860:three_prime_UTR |
| TTGGCTGACCCACTTGAAGA+TGG | 0.518779 | 7_4:-46904184 | Msa1157860:CDS |
| AGCTCTCAAGCACAAGTCAA+TGG | 0.518812 | 7_4:-46905444 | Msa1157860:CDS |
| TCATTGATGATGATCTCAAA+TGG | 0.521281 | 7_4:-46907037 | Msa1157860:CDS |
| GCATAGCATGTCGTCCCTAA+AGG | 0.523854 | 7_4:-46902959 | Msa1157860:exon |
| GTGGTGAAGGTTCAGCAGCT+AGG | 0.528642 | 7_4:-46905469 | Msa1157860:CDS |
| AATCATCAACGTTGTTGACA+TGG | 0.529958 | 7_4:+46907081 | None:intergenic |
| ACCAATATTGATTGATGCTG+TGG | 0.532194 | 7_4:-46903246 | Msa1157860:CDS |
| AGATAAGTGTTTGTGATGCA+TGG | 0.534589 | 7_4:-46901841 | Msa1157860:three_prime_UTR |
| CCCCATGAATCAGCAAATGA+TGG | 0.540394 | 7_4:+46903375 | None:intergenic |
| CTATGTTGTCACAATCTCAA+AGG | 0.546360 | 7_4:+46902280 | None:intergenic |
| AATATAGCGCAATACTTTGG+AGG | 0.553311 | 7_4:+46902909 | None:intergenic |
| AACAAATAAAACCATGGGAG+AGG | 0.560741 | 7_4:-46907162 | Msa1157860:CDS |
| TTGCTTAGCATTGCTGCTGG+TGG | 0.565122 | 7_4:+46902182 | None:intergenic |
| CGACATGCTATGCCATGACC+AGG | 0.567260 | 7_4:+46902969 | None:intergenic |
| ATTGAAAGACAAAACAGTGA+AGG | 0.569072 | 7_4:+46902067 | None:intergenic |
| TATCCAAGAGAGCAATGTCC+TGG | 0.569197 | 7_4:+46906765 | None:intergenic |
| GGACACGGTCTTATTCATGA+TGG | 0.571306 | 7_4:+46903148 | None:intergenic |
| TTACGTTAATGAGTTTGCAA+AGG | 0.578372 | 7_4:-46907126 | Msa1157860:CDS |
| TTGTGTGAAAAGATACCTGC+TGG | 0.579877 | 7_4:+46903802 | None:intergenic |
| TTGAAAGACAAAACAGTGAA+GGG | 0.580339 | 7_4:+46902068 | None:intergenic |
| ATGCCTCCTTATTTGCAACC+AGG | 0.583465 | 7_4:+46904431 | None:intergenic |
| AAGTGTTTGTGATGCATGGT+TGG | 0.583517 | 7_4:-46901837 | Msa1157860:three_prime_UTR |
| AAGGGCAATGGTTTCAAGAA+GGG | 0.584655 | 7_4:-46901975 | Msa1157860:three_prime_UTR |
| CAGCATCAATCAATATTGGT+TGG | 0.586960 | 7_4:+46903249 | None:intergenic |
| GTGTGGAATTGGATGTGAGA+TGG | 0.594217 | 7_4:-46901779 | Msa1157860:three_prime_UTR |
| AAAGGGCAATGGTTTCAAGA+AGG | 0.598373 | 7_4:-46901976 | Msa1157860:three_prime_UTR |
| TTTGGATGACATAAAAGAGA+GGG | 0.601046 | 7_4:+46906314 | None:intergenic |
| AAGAAACAAGTGACAATGGT+GGG | 0.602709 | 7_4:+46907208 | None:intergenic |
| GCATGTCGTCCCTAAAGGAA+AGG | 0.605693 | 7_4:-46902954 | Msa1157860:exon |
| CAATGGTTTCAAGAAGGGTG+TGG | 0.606722 | 7_4:-46901970 | Msa1157860:three_prime_UTR |
| GGATTTCTGCAGAAAATACC+TGG | 0.607431 | 7_4:-46904449 | Msa1157860:CDS |
| AACAAAGAAACAAGTGACAA+TGG | 0.608931 | 7_4:+46907204 | None:intergenic |
| GGAAAATTGCTCTATCTAGA+CGG | 0.609264 | 7_4:-46903191 | Msa1157860:CDS |
| TGGTTTCAAGAAGGGTGTGG+TGG | 0.610036 | 7_4:-46901967 | Msa1157860:three_prime_UTR |
| AAGCCTAAACTCACTGACAA+TGG | 0.615534 | 7_4:-46904115 | Msa1157860:CDS |
| CCATTATAAACACCGTCTTG+GGG | 0.615981 | 7_4:+46905495 | None:intergenic |
| TAAAGCGATTAGTGAATACC+AGG | 0.616434 | 7_4:-46906783 | Msa1157860:CDS |
| GTGTGGTGGAAGGATTGTGA+AGG | 0.617280 | 7_4:-46901953 | Msa1157860:three_prime_UTR |
| ACGGTGTTTATAATGGGAGG+TGG | 0.620093 | 7_4:-46905488 | Msa1157860:CDS |
| ATGGTTGGATATATGAGGGT+TGG | 0.622028 | 7_4:-46901822 | Msa1157860:three_prime_UTR |
| ATTGCAAACAAATCAAAAGG+TGG | 0.622598 | 7_4:-46902335 | Msa1157860:three_prime_UTR |
| TTAGTGTAGAGCTGATAGCA+AGG | 0.624227 | 7_4:+46904160 | None:intergenic |
| AACATCTGGTAACACCATAG+AGG | 0.635135 | 7_4:-46902114 | Msa1157860:three_prime_UTR |
| ACTTTGCACAGTTGATGACA+AGG | 0.637400 | 7_4:+46904389 | None:intergenic |
| TAGCAAGGACCATCTTCAAG+TGG | 0.638054 | 7_4:+46904175 | None:intergenic |
| AGCAAGGACCATCTTCAAGT+GGG | 0.640286 | 7_4:+46904176 | None:intergenic |
| ATGATGCTTGAATTCCAACA+AGG | 0.644146 | 7_4:-46902046 | Msa1157860:three_prime_UTR |
| CTTTGGATGACATAAAAGAG+AGG | 0.645177 | 7_4:+46906313 | None:intergenic |
| GTACACTTACGATTTGGACA+CGG | 0.645390 | 7_4:+46903133 | None:intergenic |
| CCATCATTTGCTGATTCATG+GGG | 0.648783 | 7_4:-46903375 | Msa1157860:CDS |
| ATACCTGGTTGCAAATAAGG+AGG | 0.651779 | 7_4:-46904434 | Msa1157860:CDS |
| GATGAATTGTGTCTAAGGCA+CGG | 0.652625 | 7_4:-46902599 | Msa1157860:three_prime_UTR |
| AGTTATGTGCGATATTGACA+AGG | 0.654516 | 7_4:-46905414 | Msa1157860:intron |
| ATATATTGGCAGCCCCAAGA+CGG | 0.656927 | 7_4:-46905507 | Msa1157860:intron |
| AAGACGGTGTTTATAATGGG+AGG | 0.658751 | 7_4:-46905491 | Msa1157860:CDS |
| ATGCATGGTTGGATATATGA+GGG | 0.660309 | 7_4:-46901826 | Msa1157860:three_prime_UTR |
| AAAGAAACAAGTGACAATGG+TGG | 0.679920 | 7_4:+46907207 | None:intergenic |
| AATGATTTCCTCATACCATG+TGG | 0.685776 | 7_4:+46907055 | None:intergenic |
| ACGTTGATGATTCTTCCACA+TGG | 0.698888 | 7_4:-46907070 | Msa1157860:CDS |
| GGTGGGTGCAAAGTGCAATG+TGG | 0.721477 | 7_4:+46907225 | None:intergenic |
| TTAGTGGTTGAAGAAATGTG+TGG | 0.736065 | 7_4:-46901796 | Msa1157860:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATATGAATTTTTTTCTTTT+TGG | - | chr7_4:46902748-46902767 | Msa1157860:three_prime_UTR | 10.0% |
| !!! | TTTTTTCATTTTAATATACA+TGG | + | chr7_4:46902794-46902813 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAACTAGTAAT+TGG | - | chr7_4:46903156-46903175 | Msa1157860:CDS | 10.0% |
| !!! | ATTTTAGAAGTTTATAAAAA+TGG | - | chr7_4:46903839-46903858 | Msa1157860:intron | 10.0% |
| !!! | TTTTAGAAGTTTATAAAAAT+GGG | - | chr7_4:46903840-46903859 | Msa1157860:intron | 10.0% |
| !! | ATAAAATTATATACTGATAA+TGG | - | chr7_4:46904207-46904226 | Msa1157860:CDS | 10.0% |
| !!! | CAAGTTTTTTTTTTTTTTTT+AGG | - | chr7_4:46904231-46904250 | Msa1157860:CDS | 10.0% |
| !!! | TTTTTTTAAAACAATAGTAA+TGG | - | chr7_4:46904270-46904289 | Msa1157860:intron | 10.0% |
| !! | AACAAAATTTAGTATATGTT+TGG | - | chr7_4:46902305-46902324 | Msa1157860:three_prime_UTR | 15.0% |
| !! | ATTATAAAACAAACTTACTT+TGG | + | chr7_4:46902678-46902697 | None:intergenic | 15.0% |
| !!! | TAAGTTTGTTTTATAATATC+AGG | - | chr7_4:46902681-46902700 | Msa1157860:three_prime_UTR | 15.0% |
| !!! | AAGTTTGTTTTATAATATCA+GGG | - | chr7_4:46902682-46902701 | Msa1157860:three_prime_UTR | 15.0% |
| !!! | AAGTCATATTCTTATTTTTT+TGG | - | chr7_4:46903589-46903608 | Msa1157860:intron | 15.0% |
| !!! | AGTCATATTCTTATTTTTTT+GGG | - | chr7_4:46903590-46903609 | Msa1157860:intron | 15.0% |
| !!! | TTATTAAGTTTTCAATTTGA+GGG | + | chr7_4:46903698-46903717 | None:intergenic | 15.0% |
| !!! | ATTATTAAGTTTTCAATTTG+AGG | + | chr7_4:46903699-46903718 | None:intergenic | 15.0% |
| !! | TCATAAAAAGTTACTATTTA+CGG | + | chr7_4:46903903-46903922 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTTTTTAGGGA+AGG | - | chr7_4:46904236-46904255 | Msa1157860:CDS | 15.0% |
| !!! | AACAAAAATATTTTGCTAAA+AGG | - | chr7_4:46904351-46904370 | Msa1157860:intron | 15.0% |
| !! | ATAAAATAAGGAAAATACTT+AGG | - | chr7_4:46906239-46906258 | Msa1157860:intron | 15.0% |
| !!! | ATTTTCAACAAATAAAACCA+TGG | - | chr7_4:46901803-46901822 | Msa1157860:three_prime_UTR | 20.0% |
| !!! | TTTTCAACAAATAAAACCAT+GGG | - | chr7_4:46901804-46901823 | Msa1157860:three_prime_UTR | 20.0% |
| !! | TAAAACAGAGGAAATTAAAA+AGG | + | chr7_4:46901990-46902009 | None:intergenic | 20.0% |
| !! | TACTATATCATATAAAACAG+AGG | + | chr7_4:46902002-46902021 | None:intergenic | 20.0% |
| !!! | AATCACATACTTTTTTTTAG+AGG | + | chr7_4:46902537-46902556 | None:intergenic | 20.0% |
| !!! | AGTTTGTTTTATAATATCAG+GGG | - | chr7_4:46902683-46902702 | Msa1157860:three_prime_UTR | 20.0% |
| !! | AATAAGAGAATATTACATCA+AGG | + | chr7_4:46902886-46902905 | None:intergenic | 20.0% |
| !! | GATATAAACATTGTATACAT+AGG | + | chr7_4:46903071-46903090 | None:intergenic | 20.0% |
| !!! | TTTTCTTTTTAAAATGACGA+TGG | + | chr7_4:46903138-46903157 | None:intergenic | 20.0% |
| !!! | GTAATTGGATATTTTTACAA+AGG | - | chr7_4:46903171-46903190 | Msa1157860:CDS | 20.0% |
| !! | TTTACAAAGGAAAAAACTTA+TGG | - | chr7_4:46903184-46903203 | Msa1157860:CDS | 20.0% |
| !! | TTGTAAAAGGATAAAAACAT+AGG | + | chr7_4:46903354-46903373 | None:intergenic | 20.0% |
| !!! | AAGTCTATAAAAAAGCATAA+TGG | + | chr7_4:46903389-46903408 | None:intergenic | 20.0% |
| !!! | GTCATATTCTTATTTTTTTG+GGG | - | chr7_4:46903591-46903610 | Msa1157860:intron | 20.0% |
| !!! | TCATATTCTTATTTTTTTGG+GGG | - | chr7_4:46903592-46903611 | Msa1157860:intron | 20.0% |
| !! | TAATAATATCCATATTGATG+TGG | - | chr7_4:46903715-46903734 | Msa1157860:intron | 20.0% |
| !! | AATAATATCCATATTGATGT+GGG | - | chr7_4:46903716-46903735 | Msa1157860:intron | 20.0% |
| !!! | TCCTTATTTTTCTTAAACAA+GGG | + | chr7_4:46903748-46903767 | None:intergenic | 20.0% |
| !!! | TGAAAACTTTGACATTTTTA+TGG | - | chr7_4:46903952-46903971 | Msa1157860:intron | 20.0% |
| !! | ACAAATAAATTGAGACAAAA+TGG | + | chr7_4:46904064-46904083 | None:intergenic | 20.0% |
| !! | AATAAAAAAAATATTCCTGC+AGG | - | chr7_4:46904492-46904511 | Msa1157860:intron | 20.0% |
| !! | ATGTTAAATAGTGATTAGAT+GGG | + | chr7_4:46905110-46905129 | None:intergenic | 20.0% |
| !! | AATGTTAAATAGTGATTAGA+TGG | + | chr7_4:46905111-46905130 | None:intergenic | 20.0% |
| !! | CTATAAGAAAACATACAAAA+AGG | + | chr7_4:46905143-46905162 | None:intergenic | 20.0% |
| !!! | CTTTTTGTATGTTTTCTTAT+AGG | - | chr7_4:46905141-46905160 | Msa1157860:intron | 20.0% |
| !! | AAGTCTAATTATGTTCAATT+GGG | + | chr7_4:46905365-46905384 | None:intergenic | 20.0% |
| !!! | AAATTCTTTAAAAATGGACA+CGG | + | chr7_4:46905908-46905927 | None:intergenic | 20.0% |
| !!! | GATGTCAAATTCTTTAAAAA+TGG | + | chr7_4:46905914-46905933 | None:intergenic | 20.0% |
| !! | ATCCAAATTATTATTGTTTC+AGG | - | chr7_4:46905931-46905950 | Msa1157860:intron | 20.0% |
| !!! | TGTTTTCATTAATTTGCATA+TGG | - | chr7_4:46906149-46906168 | Msa1157860:intron | 20.0% |
| !! | ATAGTTACCTAGATAAAATA+AGG | - | chr7_4:46906227-46906246 | Msa1157860:intron | 20.0% |
| !!! | GTATTTTCCTTATTTTATCT+AGG | + | chr7_4:46906237-46906256 | None:intergenic | 20.0% |
| !!! | ATGAGATTTTTAACTTTGAA+TGG | + | chr7_4:46906499-46906518 | None:intergenic | 20.0% |
| !!! | ACCATTTATTTAAGATTGAA+CGG | - | chr7_4:46906535-46906554 | Msa1157860:intron | 20.0% |
| !!! | GAACGTTTAAAATTGATTTA+GGG | + | chr7_4:46906576-46906595 | None:intergenic | 20.0% |
| !!! | AGAACGTTTAAAATTGATTT+AGG | + | chr7_4:46906577-46906596 | None:intergenic | 20.0% |
| !!! | AAATCAATTTTAAACGTTCT+CGG | - | chr7_4:46906577-46906596 | Msa1157860:intron | 20.0% |
| !!! | TCACTTGTTTCTTTGTTTTA+TGG | - | chr7_4:46901773-46901792 | Msa1157860:three_prime_UTR | 25.0% |
| !!! | CACTTGTTTCTTTGTTTTAT+GGG | - | chr7_4:46901774-46901793 | Msa1157860:three_prime_UTR | 25.0% |
| ! | TCATTAACGTAAAACATTTC+TGG | + | chr7_4:46901837-46901856 | None:intergenic | 25.0% |
| ! | TCGTAATTTCGATAAATCTA+CGG | + | chr7_4:46902336-46902355 | None:intergenic | 25.0% |
| !!! | TTGTTATTTATGCTGCATAT+AGG | - | chr7_4:46902563-46902582 | Msa1157860:three_prime_UTR | 25.0% |
| !!! | TGTTGCTATCAATATTTTTG+CGG | + | chr7_4:46902985-46903004 | None:intergenic | 25.0% |
| ! | TAAACCATACCACTTTATAT+TGG | - | chr7_4:46903044-46903063 | Msa1157860:intron | 25.0% |
| !!! | AAACATAGGTGGATTTTTTT+AGG | + | chr7_4:46903340-46903359 | None:intergenic | 25.0% |
| ! | TAAAAGGATAAAAACATAGG+TGG | + | chr7_4:46903351-46903370 | None:intergenic | 25.0% |
| !!! | GTGTGCTATTAATTTGTAAA+AGG | + | chr7_4:46903367-46903386 | None:intergenic | 25.0% |
| !!! | TGCTTTTTTATAGACTTGAT+TGG | - | chr7_4:46903392-46903411 | Msa1157860:CDS | 25.0% |
| !!! | GCTTTTTTATAGACTTGATT+GGG | - | chr7_4:46903393-46903412 | Msa1157860:CDS | 25.0% |
| !!! | CCTTATTTTTCTTAAACAAG+GGG | + | chr7_4:46903747-46903766 | None:intergenic | 25.0% |
| !!! | GTCCTTATTTTTCTTAAACA+AGG | + | chr7_4:46903749-46903768 | None:intergenic | 25.0% |
| ! | AGCAAACTTAAGTCATTTAA+GGG | + | chr7_4:46904171-46904190 | None:intergenic | 25.0% |
| ! | TAGCAAACTTAAGTCATTTA+AGG | + | chr7_4:46904172-46904191 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTTTGTGTGTGTG+TGG | - | chr7_4:46904663-46904682 | Msa1157860:intron | 25.0% |
| !! | CTTCACAATTTTGTGTTAAA+GGG | - | chr7_4:46904717-46904736 | Msa1157860:intron | 25.0% |
| ! | ATGTTAGATAGTTGTTCAAT+AGG | - | chr7_4:46904920-46904939 | Msa1157860:intron | 25.0% |
| ! | GAAGTCTAATTATGTTCAAT+TGG | + | chr7_4:46905366-46905385 | None:intergenic | 25.0% |
| ! | AATTCAGTACATGAAATTGT+GGG | - | chr7_4:46905459-46905478 | Msa1157860:CDS | 25.0% |
| !! | AATTTCTATGCTTTGAATTC+AGG | - | chr7_4:46905692-46905711 | Msa1157860:intron | 25.0% |
| ! | AGAATTGAAGCAAGAATAAA+AGG | - | chr7_4:46905759-46905778 | Msa1157860:intron | 25.0% |
| ! | TGTACAAACCTCAAATTTAA+AGG | - | chr7_4:46905856-46905875 | Msa1157860:intron | 25.0% |
| ! | AGCCTGAAACAATAATAATT+TGG | + | chr7_4:46905936-46905955 | None:intergenic | 25.0% |
| ! | AATAATATAGCGCAATACTT+TGG | + | chr7_4:46906068-46906087 | None:intergenic | 25.0% |
| ! | ATACTTAGGTAAAGTTCTAT+AGG | - | chr7_4:46906253-46906272 | Msa1157860:intron | 25.0% |
| ! | ACCGTTCAATCTTAAATAAA+TGG | + | chr7_4:46906539-46906558 | None:intergenic | 25.0% |
| !!! | TTGCAATTGTTTCTAATACA+AGG | + | chr7_4:46906623-46906642 | None:intergenic | 25.0% |
| ! | ACAATTGCAAACAAATCAAA+AGG | - | chr7_4:46906633-46906652 | Msa1157860:intron | 25.0% |
| ! | TTTAACTAAGTTCTCTTAAC+AGG | - | chr7_4:46906714-46906733 | Msa1157860:intron | 25.0% |
| !!! | AGCAAAAAGTTTTTAAGAGA+TGG | - | chr7_4:46906807-46906826 | Msa1157860:intron | 25.0% |
| ! | ACCAAACCAATAATCAATAA+TGG | + | chr7_4:46907096-46907115 | None:intergenic | 25.0% |
| AACAAAGAAACAAGTGACAA+TGG | + | chr7_4:46901770-46901789 | None:intergenic | 30.0% | |
| !!! | TTGTTTCTTTGTTTTATGGG+AGG | - | chr7_4:46901777-46901796 | Msa1157860:three_prime_UTR | 30.0% |
| TTACGTTAATGAGTTTGCAA+AGG | - | chr7_4:46901845-46901864 | Msa1157860:three_prime_UTR | 30.0% | |
| !! | TCATTGATGATGATCTCAAA+TGG | - | chr7_4:46901934-46901953 | Msa1157860:three_prime_UTR | 30.0% |
| TTTGGATGACATAAAAGAGA+GGG | + | chr7_4:46902660-46902679 | None:intergenic | 30.0% | |
| !! | TTGTTTTATAATATCAGGGG+AGG | - | chr7_4:46902686-46902705 | Msa1157860:three_prime_UTR | 30.0% |
| TACATAGGTCCAATATAAAG+TGG | + | chr7_4:46903056-46903075 | None:intergenic | 30.0% | |
| ! | ACTCTTTTATACTCTCTTGT+TGG | + | chr7_4:46903093-46903112 | None:intergenic | 30.0% |
| GATTATGTTTGATGAAACCT+TGG | - | chr7_4:46903415-46903434 | Msa1157860:intron | 30.0% | |
| ! | TAAGTTTTCAATTTGAGGGA+CGG | + | chr7_4:46903694-46903713 | None:intergenic | 30.0% |
| ! | CCCCTTGTTTAAGAAAAATA+AGG | - | chr7_4:46903744-46903763 | Msa1157860:intron | 30.0% |
| GTTTGTGCAATAAAGTGTAT+TGG | - | chr7_4:46903925-46903944 | Msa1157860:intron | 30.0% | |
| TTAAGTCATTTAAGGGATAC+TGG | + | chr7_4:46904164-46904183 | None:intergenic | 30.0% | |
| TGGTAAGAATTTGTAAGACA+TGG | - | chr7_4:46904403-46904422 | Msa1157860:CDS | 30.0% | |
| AAAAAAAATATTCCTGCAGG+AGG | - | chr7_4:46904495-46904514 | Msa1157860:intron | 30.0% | |
| AAAATACCTGGTTGCAAATA+AGG | - | chr7_4:46904534-46904553 | Msa1157860:intron | 30.0% | |
| ! | GCTTCACAATTTTGTGTTAA+AGG | - | chr7_4:46904716-46904735 | Msa1157860:intron | 30.0% |
| GAGAAGTTTGATATCATTGT+TGG | - | chr7_4:46904760-46904779 | Msa1157860:intron | 30.0% | |
| TGATATCATTGTTGGAGATT+TGG | - | chr7_4:46904768-46904787 | Msa1157860:intron | 30.0% | |
| AAAGCGTGGTAACAAAAATA+TGG | + | chr7_4:46905079-46905098 | None:intergenic | 30.0% | |
| ! | TTGTATGTTTTCTTATAGGC+TGG | - | chr7_4:46905145-46905164 | Msa1157860:intron | 30.0% |
| !!! | TTTTATGGTGTTGTGTATAG+AGG | + | chr7_4:46905206-46905225 | None:intergenic | 30.0% |
| TATACACAACACCATAAAAC+AGG | - | chr7_4:46905207-46905226 | Msa1157860:intron | 30.0% | |
| ! | ACATTTGAAGACCTGTTTTA+TGG | + | chr7_4:46905221-46905240 | None:intergenic | 30.0% |
| ! | ACCTCAAATCTTTTACTAGT+AGG | - | chr7_4:46905253-46905272 | Msa1157860:intron | 30.0% |
| ACCTACTAGTAAAAGATTTG+AGG | + | chr7_4:46905257-46905276 | None:intergenic | 30.0% | |
| !! | TAGTAGGTGTTTGTTATAAC+CGG | - | chr7_4:46905269-46905288 | Msa1157860:intron | 30.0% |
| ACACTTGTTCAAACAAAACA+TGG | - | chr7_4:46905424-46905443 | Msa1157860:CDS | 30.0% | |
| CAATTCAGTACATGAAATTG+TGG | - | chr7_4:46905458-46905477 | Msa1157860:CDS | 30.0% | |
| TATTCATGATGGTAGATGAA+TGG | + | chr7_4:46905815-46905834 | None:intergenic | 30.0% | |
| AAATGGTTAAATTACACCAG+AGG | + | chr7_4:46905883-46905902 | None:intergenic | 30.0% | |
| TAAAAATGGACACGGTTAAA+TGG | + | chr7_4:46905900-46905919 | None:intergenic | 30.0% | |
| GATAATGCTAGATTTATTCC+TGG | - | chr7_4:46905984-46906003 | Msa1157860:intron | 30.0% | |
| ! | TTAGTCCAGATTTGACTTTA+AGG | - | chr7_4:46906086-46906105 | Msa1157860:intron | 30.0% |
| ATTGACCTTAAAGTCAAATC+TGG | + | chr7_4:46906094-46906113 | None:intergenic | 30.0% | |
| ! | TTTTATCTAGGTAACTATGC+TGG | + | chr7_4:46906225-46906244 | None:intergenic | 30.0% |
| TCCAAATTGTTTCATCAACT+TGG | - | chr7_4:46906436-46906455 | Msa1157860:intron | 30.0% | |
| ATTGCAAACAAATCAAAAGG+TGG | - | chr7_4:46906636-46906655 | Msa1157860:intron | 30.0% | |
| GTTGTTCTTACAGCTATATT+GGG | + | chr7_4:46906768-46906787 | None:intergenic | 30.0% | |
| TGTTGTTCTTACAGCTATAT+TGG | + | chr7_4:46906769-46906788 | None:intergenic | 30.0% | |
| ! | TTTTGTATTAACAGCCTCTA+TGG | + | chr7_4:46906874-46906893 | None:intergenic | 30.0% |
| TTGAAAGACAAAACAGTGAA+GGG | + | chr7_4:46906906-46906925 | None:intergenic | 30.0% | |
| ATTGAAAGACAAAACAGTGA+AGG | + | chr7_4:46906907-46906926 | None:intergenic | 30.0% | |
| ! | CTGAAGCCATTATTGATTAT+TGG | - | chr7_4:46907087-46907106 | Msa1157860:CDS | 30.0% |
| ! | GCCATTATTGATTATTGGTT+TGG | - | chr7_4:46907092-46907111 | Msa1157860:CDS | 30.0% |
| !!! | TGGAGATTTTTTTGATGATG+TGG | - | chr7_4:46907219-46907238 | Msa1157860:five_prime_UTR | 30.0% |
| !!! | GGAGATTTTTTTGATGATGT+GGG | - | chr7_4:46907220-46907239 | Msa1157860:five_prime_UTR | 30.0% |
| AAGAAACAAGTGACAATGGT+GGG | + | chr7_4:46901766-46901785 | None:intergenic | 35.0% | |
| AAAGAAACAAGTGACAATGG+TGG | + | chr7_4:46901767-46901786 | None:intergenic | 35.0% | |
| AACAAATAAAACCATGGGAG+AGG | - | chr7_4:46901809-46901828 | Msa1157860:three_prime_UTR | 35.0% | |
| AATCATCAACGTTGTTGACA+TGG | + | chr7_4:46901893-46901912 | None:intergenic | 35.0% | |
| AATGATTTCCTCATACCATG+TGG | + | chr7_4:46901919-46901938 | None:intergenic | 35.0% | |
| AATGGTCCTTTAAACTCAAC+AGG | - | chr7_4:46901952-46901971 | Msa1157860:three_prime_UTR | 35.0% | |
| AACGAACCTGTTGAGTTTAA+AGG | + | chr7_4:46901961-46901980 | None:intergenic | 35.0% | |
| TAAAGCGATTAGTGAATACC+AGG | - | chr7_4:46902188-46902207 | Msa1157860:three_prime_UTR | 35.0% | |
| CTTTGGATGACATAAAAGAG+AGG | + | chr7_4:46902661-46902680 | None:intergenic | 35.0% | |
| AGGTCCAATATAAAGTGGTA+TGG | + | chr7_4:46903051-46903070 | None:intergenic | 35.0% | |
| AACCTTGGACTAATATGAAG+AGG | - | chr7_4:46903430-46903449 | Msa1157860:intron | 35.0% | |
| AGGCATGTGTGGTAATATAT+TGG | - | chr7_4:46903450-46903469 | Msa1157860:intron | 35.0% | |
| AGTTATGTGCGATATTGACA+AGG | - | chr7_4:46903557-46903576 | Msa1157860:intron | 35.0% | |
| TGCTAAAAGGACAGACAAAA+TGG | - | chr7_4:46904364-46904383 | Msa1157860:intron | 35.0% | |
| ATGGAACAGAGAGAGAATAT+TGG | - | chr7_4:46904383-46904402 | Msa1157860:intron | 35.0% | |
| ! | AGCTAGCTCATTTTGCAAAT+AGG | - | chr7_4:46904609-46904628 | Msa1157860:intron | 35.0% |
| GGCTGAATTAGAGAAAAGAA+AGG | - | chr7_4:46904738-46904757 | Msa1157860:intron | 35.0% | |
| CTTCACAACTTTCTCATAGA+AGG | + | chr7_4:46904839-46904858 | None:intergenic | 35.0% | |
| ! | TACAATCTGGAGCGAAATTT+AGG | + | chr7_4:46904948-46904967 | None:intergenic | 35.0% |
| TCAGAAGTTGTGATACAATC+TGG | + | chr7_4:46904961-46904980 | None:intergenic | 35.0% | |
| TTGGAAAAAGAATACCAGTC+AGG | + | chr7_4:46905022-46905041 | None:intergenic | 35.0% | |
| TTCAAAATCGCTCACTTGAT+TGG | + | chr7_4:46905041-46905060 | None:intergenic | 35.0% | |
| ! | AGGTATCTTTTCACACAAAG+AGG | - | chr7_4:46905174-46905193 | Msa1157860:intron | 35.0% |
| !! | AACCGGGTTGAATTTGTTAT+TGG | - | chr7_4:46905296-46905315 | Msa1157860:intron | 35.0% |
| AGCCAATAACAAATTCAACC+CGG | + | chr7_4:46905301-46905320 | None:intergenic | 35.0% | |
| ! | ATGTTTTGCTTACGTGCTTT+TGG | - | chr7_4:46905511-46905530 | Msa1157860:intron | 35.0% |
| !! | TACCATCATTTGCTGATTCA+TGG | - | chr7_4:46905594-46905613 | Msa1157860:intron | 35.0% |
| !! | ACCATCATTTGCTGATTCAT+GGG | - | chr7_4:46905595-46905614 | Msa1157860:intron | 35.0% |
| CAGCATCAATCAATATTGGT+TGG | + | chr7_4:46905725-46905744 | None:intergenic | 35.0% | |
| ! | ACCAATATTGATTGATGCTG+TGG | - | chr7_4:46905725-46905744 | Msa1157860:intron | 35.0% |
| TCCACAGCATCAATCAATAT+TGG | + | chr7_4:46905729-46905748 | None:intergenic | 35.0% | |
| ATTGATTGATGCTGTGGAAA+TGG | - | chr7_4:46905731-46905750 | Msa1157860:intron | 35.0% | |
| GGAAAATTGCTCTATCTAGA+CGG | - | chr7_4:46905780-46905799 | Msa1157860:intron | 35.0% | |
| AGGTTTGTACACTTACGATT+TGG | + | chr7_4:46905847-46905866 | None:intergenic | 35.0% | |
| GAGTCATTTCCTTTCCTTTA+GGG | + | chr7_4:46906029-46906048 | None:intergenic | 35.0% | |
| AGAGTCATTTCCTTTCCTTT+AGG | + | chr7_4:46906030-46906049 | None:intergenic | 35.0% | |
| AATATAGCGCAATACTTTGG+AGG | + | chr7_4:46906065-46906084 | None:intergenic | 35.0% | |
| !! | TGACTTTAAGGTCAATCTGT+AGG | - | chr7_4:46906098-46906117 | Msa1157860:intron | 35.0% |
| !! | GACTTTAAGGTCAATCTGTA+GGG | - | chr7_4:46906099-46906118 | Msa1157860:intron | 35.0% |
| !!! | TCTTTTTTTGATGCAGCTGT+TGG | + | chr7_4:46906312-46906331 | None:intergenic | 35.0% |
| AACCTGATGAATTGTGTCTA+AGG | - | chr7_4:46906367-46906386 | Msa1157860:CDS | 35.0% | |
| !! | GCCAAGTTGATGAAACAATT+TGG | + | chr7_4:46906440-46906459 | None:intergenic | 35.0% |
| TAAACGTTCTCGGTAATTGT+TGG | - | chr7_4:46906587-46906606 | Msa1157860:intron | 35.0% | |
| CTATGTTGTCACAATCTCAA+AGG | + | chr7_4:46906694-46906713 | None:intergenic | 35.0% | |
| ATGATGCTTGAATTCCAACA+AGG | - | chr7_4:46906925-46906944 | Msa1157860:intron | 35.0% | |
| ACTTCAAAATCCAACCTTGT+TGG | + | chr7_4:46906942-46906961 | None:intergenic | 35.0% | |
| ! | AAGGATTGTGAAGGTTTTTG+TGG | - | chr7_4:46907027-46907046 | Msa1157860:CDS | 35.0% |
| ! | AGGATTGTGAAGGTTTTTGT+GGG | - | chr7_4:46907028-46907047 | Msa1157860:CDS | 35.0% |
| AGATAAGTGTTTGTGATGCA+TGG | - | chr7_4:46907130-46907149 | Msa1157860:CDS | 35.0% | |
| ATGCATGGTTGGATATATGA+GGG | - | chr7_4:46907145-46907164 | Msa1157860:CDS | 35.0% | |
| ATATGAGGGTTGGATATTAG+TGG | - | chr7_4:46907159-46907178 | Msa1157860:CDS | 35.0% | |
| TTAGTGGTTGAAGAAATGTG+TGG | - | chr7_4:46907175-46907194 | Msa1157860:CDS | 35.0% | |
| GTTGAAGAAATGTGTGGAAT+TGG | - | chr7_4:46907181-46907200 | Msa1157860:CDS | 35.0% | |
| ATTGGATGTGAGATGGAAAA+TGG | - | chr7_4:46907199-46907218 | Msa1157860:exon | 35.0% | |
| !! | CATGGTTTGGTTGAACTTCA+GGG | + | chr7_4:46901875-46901894 | None:intergenic | 40.0% |
| !! | ACATGGTTTGGTTGAACTTC+AGG | + | chr7_4:46901876-46901895 | None:intergenic | 40.0% |
| TCAACGTTGTTGACATGGTT+TGG | + | chr7_4:46901888-46901907 | None:intergenic | 40.0% | |
| !! | ACGTTGATGATTCTTCCACA+TGG | - | chr7_4:46901901-46901920 | Msa1157860:three_prime_UTR | 40.0% |
| TGATTCTTCCACATGGTATG+AGG | - | chr7_4:46901908-46901927 | Msa1157860:three_prime_UTR | 40.0% | |
| !! | CTCTTGGATACAAAGCGTTT+TGG | - | chr7_4:46902219-46902238 | Msa1157860:three_prime_UTR | 40.0% |
| !!! | GGATACAAAGCGTTTTGGAA+AGG | - | chr7_4:46902224-46902243 | Msa1157860:three_prime_UTR | 40.0% |
| !!! | ATTTTGATTCGCAACGAGTG+TGG | + | chr7_4:46902374-46902393 | None:intergenic | 40.0% |
| !! | ATATAGGCGTTGATGCTTGA+TGG | - | chr7_4:46902579-46902598 | Msa1157860:three_prime_UTR | 40.0% |
| AGAGTCTGACAAAGTAAGTG+TGG | - | chr7_4:46903108-46903127 | Msa1157860:intron | 40.0% | |
| TGCCTCTTCATATTAGTCCA+AGG | + | chr7_4:46903435-46903454 | None:intergenic | 40.0% | |
| ! | CTAATATGAAGAGGCATGTG+TGG | - | chr7_4:46903439-46903458 | Msa1157860:intron | 40.0% |
| CCATTATAAACACCGTCTTG+GGG | + | chr7_4:46903479-46903498 | None:intergenic | 40.0% | |
| CCCATTATAAACACCGTCTT+GGG | + | chr7_4:46903480-46903499 | None:intergenic | 40.0% | |
| CCCAAGACGGTGTTTATAAT+GGG | - | chr7_4:46903477-46903496 | Msa1157860:intron | 40.0% | |
| TCCCATTATAAACACCGTCT+TGG | + | chr7_4:46903481-46903500 | None:intergenic | 40.0% | |
| ! | AAGACGGTGTTTATAATGGG+AGG | - | chr7_4:46903480-46903499 | Msa1157860:intron | 40.0% |
| ! | TTTATAATGGGAGGTGGTGA+AGG | - | chr7_4:46903489-46903508 | Msa1157860:intron | 40.0% |
| AAATGTTAACTAGTGCCCCT+GGG | - | chr7_4:46903863-46903882 | Msa1157860:intron | 40.0% | |
| AAAAATATTCCTGCAGGAGG+TGG | - | chr7_4:46904498-46904517 | Msa1157860:intron | 40.0% | |
| GGATTTCTGCAGAAAATACC+TGG | - | chr7_4:46904522-46904541 | Msa1157860:intron | 40.0% | |
| ATACCTGGTTGCAAATAAGG+AGG | - | chr7_4:46904537-46904556 | Msa1157860:intron | 40.0% | |
| !! | ACTTTGCACAGTTGATGACA+AGG | + | chr7_4:46904585-46904604 | None:intergenic | 40.0% |
| TTGTGTGTGTGTGGATTTCA+TGG | - | chr7_4:46904672-46904691 | Msa1157860:intron | 40.0% | |
| TTAGTGTAGAGCTGATAGCA+AGG | + | chr7_4:46904814-46904833 | None:intergenic | 40.0% | |
| AAGCCTAAACTCACTGACAA+TGG | - | chr7_4:46904856-46904875 | Msa1157860:intron | 40.0% | |
| ATGCCATTGTCAGTGAGTTT+AGG | + | chr7_4:46904862-46904881 | None:intergenic | 40.0% | |
| TGTTCCTCAAAAGTCTACCT+GGG | + | chr7_4:46904893-46904912 | None:intergenic | 40.0% | |
| GTCAGGAGTTACAACTCAAT+CGG | + | chr7_4:46905005-46905024 | None:intergenic | 40.0% | |
| ! | ATTGAGTTGTAACTCCTGAC+TGG | - | chr7_4:46905005-46905024 | Msa1157860:intron | 40.0% |
| TTGTGTGAAAAGATACCTGC+TGG | + | chr7_4:46905172-46905191 | None:intergenic | 40.0% | |
| TTGTTATAACCGGATCGAAC+CGG | - | chr7_4:46905279-46905298 | Msa1157860:intron | 40.0% | |
| TTCGTTCCTTCTTTCCCATT+TGG | - | chr7_4:46905542-46905561 | Msa1157860:intron | 40.0% | |
| !! | CCATCATTTGCTGATTCATG+GGG | - | chr7_4:46905596-46905615 | Msa1157860:intron | 40.0% |
| !! | ATTTGCTGATTCATGGGGAT+GGG | - | chr7_4:46905601-46905620 | Msa1157860:intron | 40.0% |
| ! | GTACACTTACGATTTGGACA+CGG | + | chr7_4:46905841-46905860 | None:intergenic | 40.0% |
| CCAGAGGTCCTTTAAATTTG+AGG | + | chr7_4:46905867-46905886 | None:intergenic | 40.0% | |
| CCTCAAATTTAAAGGACCTC+TGG | - | chr7_4:46905864-46905883 | Msa1157860:intron | 40.0% | |
| GCTAGATTTATTCCTGGTCA+TGG | - | chr7_4:46905990-46906009 | Msa1157860:intron | 40.0% | |
| TGCCTTAGACACAATTCATC+AGG | + | chr7_4:46906372-46906391 | None:intergenic | 40.0% | |
| ! | GATGAATTGTGTCTAAGGCA+CGG | - | chr7_4:46906372-46906391 | Msa1157860:CDS | 40.0% |
| ! | ATCAACTTGGCTTGAGTAGT+AGG | - | chr7_4:46906449-46906468 | Msa1157860:intron | 40.0% |
| ! | TTTTTGCTTAGCATTGCTGC+TGG | + | chr7_4:46906795-46906814 | None:intergenic | 40.0% |
| AACATCTGGTAACACCATAG+AGG | - | chr7_4:46906857-46906876 | Msa1157860:intron | 40.0% | |
| TGCTTGAATTCCAACAAGGT+TGG | - | chr7_4:46906929-46906948 | Msa1157860:intron | 40.0% | |
| ACTAGTGTCTTCTTTGCTTG+TGG | - | chr7_4:46906972-46906991 | Msa1157860:intron | 40.0% | |
| TGTCTTCTTTGCTTGTGGAA+AGG | - | chr7_4:46906977-46906996 | Msa1157860:intron | 40.0% | |
| GTCTTCTTTGCTTGTGGAAA+GGG | - | chr7_4:46906978-46906997 | Msa1157860:intron | 40.0% | |
| AAAGGGCAATGGTTTCAAGA+AGG | - | chr7_4:46906995-46907014 | Msa1157860:intron | 40.0% | |
| AAGGGCAATGGTTTCAAGAA+GGG | - | chr7_4:46906996-46907015 | Msa1157860:intron | 40.0% | |
| ! | ATTGTGAAGGTTTTTGTGGG+TGG | - | chr7_4:46907031-46907050 | Msa1157860:CDS | 40.0% |
| AAGTGTTTGTGATGCATGGT+TGG | - | chr7_4:46907134-46907153 | Msa1157860:CDS | 40.0% | |
| GATGCATGGTTGGATATATG+AGG | - | chr7_4:46907144-46907163 | Msa1157860:CDS | 40.0% | |
| ATGGTTGGATATATGAGGGT+TGG | - | chr7_4:46907149-46907168 | Msa1157860:CDS | 40.0% | |
| ATACCAGGACATTGCTCTCT+TGG | - | chr7_4:46902203-46902222 | Msa1157860:three_prime_UTR | 45.0% | |
| TATCCAAGAGAGCAATGTCC+TGG | + | chr7_4:46902209-46902228 | None:intergenic | 45.0% | |
| ATATATTGGCAGCCCCAAGA+CGG | - | chr7_4:46903464-46903483 | Msa1157860:intron | 45.0% | |
| CCCCAAGACGGTGTTTATAA+TGG | - | chr7_4:46903476-46903495 | Msa1157860:intron | 45.0% | |
| ! | ACGGTGTTTATAATGGGAGG+TGG | - | chr7_4:46903483-46903502 | Msa1157860:intron | 45.0% |
| AGCTCTCAAGCACAAGTCAA+TGG | - | chr7_4:46903527-46903546 | Msa1157860:intron | 45.0% | |
| GAAATGTTAACTAGTGCCCC+TGG | - | chr7_4:46903862-46903881 | Msa1157860:intron | 45.0% | |
| AATGTTAACTAGTGCCCCTG+GGG | - | chr7_4:46903864-46903883 | Msa1157860:intron | 45.0% | |
| !! | AGAATGCTTAAAGAGTGCCC+CGG | - | chr7_4:46903991-46904010 | Msa1157860:intron | 45.0% |
| ! | ATGCCTCCTTATTTGCAACC+AGG | + | chr7_4:46904543-46904562 | None:intergenic | 45.0% |
| AGCAAGGACCATCTTCAAGT+GGG | + | chr7_4:46904798-46904817 | None:intergenic | 45.0% | |
| TAGCAAGGACCATCTTCAAG+TGG | + | chr7_4:46904799-46904818 | None:intergenic | 45.0% | |
| ! | CAATGGCATTTTTGTGACCC+AGG | - | chr7_4:46904873-46904892 | Msa1157860:intron | 45.0% |
| GTGTTCCTCAAAAGTCTACC+TGG | + | chr7_4:46904894-46904913 | None:intergenic | 45.0% | |
| TGTTATAACCGGATCGAACC+GGG | - | chr7_4:46905280-46905299 | Msa1157860:intron | 45.0% | |
| ! | AAATTCAACCCGGTTCGATC+CGG | + | chr7_4:46905291-46905310 | None:intergenic | 45.0% |
| TCTGCACCAAATGGGAAAGA+AGG | + | chr7_4:46905551-46905570 | None:intergenic | 45.0% | |
| !! | TTTCCCATTTGGTGCAGATG+TGG | - | chr7_4:46905553-46905572 | Msa1157860:intron | 45.0% |
| CCCCATGAATCAGCAAATGA+TGG | + | chr7_4:46905599-46905618 | None:intergenic | 45.0% | |
| !! | CATTTGCTGATTCATGGGGA+TGG | - | chr7_4:46905600-46905619 | Msa1157860:intron | 45.0% |
| !! | TGATTCATGGGGATGGGTTA+TGG | - | chr7_4:46905607-46905626 | Msa1157860:intron | 45.0% |
| !! | GGACACGGTCTTATTCATGA+TGG | + | chr7_4:46905826-46905845 | None:intergenic | 45.0% |
| !! | GCTATATTGGGTGCTGTTGT+TGG | + | chr7_4:46906756-46906775 | None:intergenic | 45.0% |
| TTTGCTTGTGGAAAGGGCAA+TGG | - | chr7_4:46906984-46907003 | Msa1157860:intron | 45.0% | |
| CAATGGTTTCAAGAAGGGTG+TGG | - | chr7_4:46907001-46907020 | Msa1157860:intron | 45.0% | |
| ! | AAGGTTTTTGTGGGTGGCTT+GGG | - | chr7_4:46907037-46907056 | Msa1157860:CDS | 45.0% |
| GTGTGGAATTGGATGTGAGA+TGG | - | chr7_4:46907192-46907211 | Msa1157860:exon | 45.0% | |
| !! | TTATAATACTATAAAAAAAA+TGG | + | chr7_4:46902909-46902928 | None:intergenic | 5.0% |
| !!! | AACATTTATATATTTTTATT+GGG | + | chr7_4:46904035-46904054 | None:intergenic | 5.0% |
| !!! | AAACATTTATATATTTTTAT+TGG | + | chr7_4:46904036-46904055 | None:intergenic | 5.0% |
| !!! | AAGTTTTTTTTTTTTTTTTA+GGG | - | chr7_4:46904232-46904251 | Msa1157860:CDS | 5.0% |
| !!! | TTTATTATTGAATTATTTTA+TGG | + | chr7_4:46906412-46906431 | None:intergenic | 5.0% |
| TGGTGAAGGTTCAGCAGCTA+GGG | - | chr7_4:46903503-46903522 | Msa1157860:intron | 50.0% | |
| !! | GAATGCTTAAAGAGTGCCCC+GGG | - | chr7_4:46903992-46904011 | Msa1157860:intron | 50.0% |
| !! | AATGCTTAAAGAGTGCCCCG+GGG | - | chr7_4:46903993-46904012 | Msa1157860:intron | 50.0% |
| AATATTCCTGCAGGAGGTGG+TGG | - | chr7_4:46904501-46904520 | Msa1157860:intron | 50.0% | |
| TTGGCTGACCCACTTGAAGA+TGG | - | chr7_4:46904787-46904806 | Msa1157860:intron | 50.0% | |
| ! | GTGACCCAGGTAGACTTTTG+AGG | - | chr7_4:46904886-46904905 | Msa1157860:intron | 50.0% |
| GATGGGTAGTGAGAAAAGCG+TGG | + | chr7_4:46905093-46905112 | None:intergenic | 50.0% | |
| TTCTTATAGGCTGGACCAGC+AGG | - | chr7_4:46905154-46905173 | Msa1157860:intron | 50.0% | |
| CCACCACATCTGCACCAAAT+GGG | + | chr7_4:46905559-46905578 | None:intergenic | 50.0% | |
| TGCTCTATCTAGACGGTGCT+TGG | - | chr7_4:46905787-46905806 | Msa1157860:intron | 50.0% | |
| GCATAGCATGTCGTCCCTAA+AGG | - | chr7_4:46906012-46906031 | Msa1157860:intron | 50.0% | |
| GCATGTCGTCCCTAAAGGAA+AGG | - | chr7_4:46906017-46906036 | Msa1157860:intron | 50.0% | |
| TTGCTTAGCATTGCTGCTGG+TGG | + | chr7_4:46906792-46906811 | None:intergenic | 50.0% | |
| ! | TGGTTTCAAGAAGGGTGTGG+TGG | - | chr7_4:46907004-46907023 | Msa1157860:intron | 50.0% |
| ! | TTCAAGAAGGGTGTGGTGGA+AGG | - | chr7_4:46907008-46907027 | Msa1157860:intron | 50.0% |
| ! | GTGTGGTGGAAGGATTGTGA+AGG | - | chr7_4:46907018-46907037 | Msa1157860:intron | 50.0% |
| ! | GAAGGTTTTTGTGGGTGGCT+TGG | - | chr7_4:46907036-46907055 | Msa1157860:CDS | 50.0% |
| GGTGGGTGCAAAGTGCAATG+TGG | + | chr7_4:46901749-46901768 | None:intergenic | 55.0% | |
| !! | CATTTCTGGTGCCTCTCCCA+TGG | + | chr7_4:46901823-46901842 | None:intergenic | 55.0% |
| CAACGAGTGTGGCACGATCA+CGG | + | chr7_4:46902363-46902382 | None:intergenic | 55.0% | |
| GTGGTGAAGGTTCAGCAGCT+AGG | - | chr7_4:46903502-46903521 | Msa1157860:intron | 55.0% | |
| ! | GGGCACTGCCCACATCAATA+TGG | + | chr7_4:46903727-46903746 | None:intergenic | 55.0% |
| !! | ATGCTTAAAGAGTGCCCCGG+GGG | - | chr7_4:46903994-46904013 | Msa1157860:intron | 55.0% |
| TCTTGTTAACGAGTGCCCCC+GGG | + | chr7_4:46904012-46904031 | None:intergenic | 55.0% | |
| ! | GTCTTGTTAACGAGTGCCCC+CGG | + | chr7_4:46904013-46904032 | None:intergenic | 55.0% |
| AGAAATCCACCACCTCCTGC+AGG | + | chr7_4:46904510-46904529 | None:intergenic | 55.0% | |
| !! | CCCATTTGGTGCAGATGTGG+TGG | - | chr7_4:46905556-46905575 | Msa1157860:intron | 55.0% |
| GCCACCACATCTGCACCAAA+TGG | + | chr7_4:46905560-46905579 | None:intergenic | 55.0% | |
| CGACATGCTATGCCATGACC+AGG | + | chr7_4:46906005-46906024 | None:intergenic | 55.0% | |
| CCAGATGTTGCTCATGCAGC+TGG | + | chr7_4:46906846-46906865 | None:intergenic | 55.0% | |
| CCAGCTGCATGAGCAACATC+TGG | - | chr7_4:46906843-46906862 | Msa1157860:intron | 55.0% | |
| ! | TTGTGGGTGGCTTGGGTTAG+TGG | - | chr7_4:46907044-46907063 | Msa1157860:CDS | 55.0% |
| GTCCTTAACCAGTGCCCCAG+GGG | + | chr7_4:46903881-46903900 | None:intergenic | 60.0% | |
| GGTCCTTAACCAGTGCCCCA+GGG | + | chr7_4:46903882-46903901 | None:intergenic | 60.0% | |
| CTTGTTAACGAGTGCCCCCG+GGG | + | chr7_4:46904011-46904030 | None:intergenic | 60.0% | |
| CGAGTGTGGCACGATCACGG+TGG | + | chr7_4:46902360-46902379 | None:intergenic | 65.0% | |
| AACTAGTGCCCCTGGGGCAC+TGG | - | chr7_4:46903870-46903889 | Msa1157860:intron | 65.0% | |
| !! | TGCCCCTGGGGCACTGGTTA+AGG | - | chr7_4:46903876-46903895 | Msa1157860:intron | 65.0% |
| CGGTCCTTAACCAGTGCCCC+AGG | + | chr7_4:46903883-46903902 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 46901746 | 46907247 | 46901746 | ID=Msa1157860;Name=Msa1157860 |
| chr7_4 | mRNA | 46901746 | 46907247 | 46901746 | ID=Msa1157860-mRNA-1;Parent=Msa1157860;Name=Msa1157860-mRNA-1;_AED=0.06;_eAED=0.06;_QI=46|1|1|1|1|1|10|1216|347 |
| chr7_4 | exon | 46901746 | 46903040 | 46901746 | ID=Msa1157860-mRNA-1:exon:12461;Parent=Msa1157860-mRNA-1 |
| chr7_4 | exon | 46903143 | 46903279 | 46903143 | ID=Msa1157860-mRNA-1:exon:12460;Parent=Msa1157860-mRNA-1 |
| chr7_4 | exon | 46903365 | 46903423 | 46903365 | ID=Msa1157860-mRNA-1:exon:12459;Parent=Msa1157860-mRNA-1 |
| chr7_4 | exon | 46903755 | 46903830 | 46903755 | ID=Msa1157860-mRNA-1:exon:12458;Parent=Msa1157860-mRNA-1 |
| chr7_4 | exon | 46904099 | 46904255 | 46904099 | ID=Msa1157860-mRNA-1:exon:12457;Parent=Msa1157860-mRNA-1 |
| chr7_4 | exon | 46904391 | 46904479 | 46904391 | ID=Msa1157860-mRNA-1:exon:12456;Parent=Msa1157860-mRNA-1 |
| chr7_4 | exon | 46905415 | 46905517 | 46905415 | ID=Msa1157860-mRNA-1:exon:12455;Parent=Msa1157860-mRNA-1 |
| chr7_4 | exon | 46906314 | 46906408 | 46906314 | ID=Msa1157860-mRNA-1:exon:12454;Parent=Msa1157860-mRNA-1 |
| chr7_4 | exon | 46906748 | 46906814 | 46906748 | ID=Msa1157860-mRNA-1:exon:12453;Parent=Msa1157860-mRNA-1 |
| chr7_4 | exon | 46907020 | 46907247 | 46907020 | ID=Msa1157860-mRNA-1:exon:12452;Parent=Msa1157860-mRNA-1 |
| chr7_4 | five_prime_UTR | 46907202 | 46907247 | 46907202 | ID=Msa1157860-mRNA-1:five_prime_utr;Parent=Msa1157860-mRNA-1 |
| chr7_4 | CDS | 46907020 | 46907201 | 46907020 | ID=Msa1157860-mRNA-1:cds;Parent=Msa1157860-mRNA-1 |
| chr7_4 | CDS | 46906748 | 46906814 | 46906748 | ID=Msa1157860-mRNA-1:cds;Parent=Msa1157860-mRNA-1 |
| chr7_4 | CDS | 46906314 | 46906408 | 46906314 | ID=Msa1157860-mRNA-1:cds;Parent=Msa1157860-mRNA-1 |
| chr7_4 | CDS | 46905415 | 46905517 | 46905415 | ID=Msa1157860-mRNA-1:cds;Parent=Msa1157860-mRNA-1 |
| chr7_4 | CDS | 46904391 | 46904479 | 46904391 | ID=Msa1157860-mRNA-1:cds;Parent=Msa1157860-mRNA-1 |
| chr7_4 | CDS | 46904099 | 46904255 | 46904099 | ID=Msa1157860-mRNA-1:cds;Parent=Msa1157860-mRNA-1 |
| chr7_4 | CDS | 46903755 | 46903830 | 46903755 | ID=Msa1157860-mRNA-1:cds;Parent=Msa1157860-mRNA-1 |
| chr7_4 | CDS | 46903365 | 46903423 | 46903365 | ID=Msa1157860-mRNA-1:cds;Parent=Msa1157860-mRNA-1 |
| chr7_4 | CDS | 46903143 | 46903279 | 46903143 | ID=Msa1157860-mRNA-1:cds;Parent=Msa1157860-mRNA-1 |
| chr7_4 | CDS | 46902962 | 46903040 | 46902962 | ID=Msa1157860-mRNA-1:cds;Parent=Msa1157860-mRNA-1 |
| chr7_4 | three_prime_UTR | 46901746 | 46902961 | 46901746 | ID=Msa1157860-mRNA-1:three_prime_utr;Parent=Msa1157860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
