Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1228040 | XP_003626730.1 | 99.527 | 423 | 2 | 0 | 1 | 423 | 1 | 423 | 0.0 | 868 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1228040 | sp|Q0JB88|DJA6_ORYSJ | 70.283 | 424 | 117 | 4 | 1 | 423 | 1 | 416 | 0.0 | 585 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1228040 | G7LBN4 | 99.527 | 423 | 2 | 0 | 1 | 423 | 1 | 423 | 0.0 | 868 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa1228040 | 0.805609 | 1.229022e-49 | -8.615850e-47 |
| Msa0000910 | Msa1228040 | 0.826520 | 2.593564e-54 | -8.615850e-47 |
| Msa0001450 | Msa1228040 | 0.801571 | 8.454987e-49 | -8.615850e-47 |
| Msa0024400 | Msa1228040 | 0.900173 | 9.546945e-78 | -8.615850e-47 |
| Msa0026780 | Msa1228040 | 0.833841 | 4.229542e-56 | -8.615850e-47 |
| Msa0029630 | Msa1228040 | 0.811189 | 7.930503e-51 | -8.615850e-47 |
| Msa0038290 | Msa1228040 | -0.821657 | 3.593322e-53 | -8.615850e-47 |
| Msa0059840 | Msa1228040 | 0.801844 | 7.432768e-49 | -8.615850e-47 |
| Msa0072420 | Msa1228040 | 0.829724 | 4.386011e-55 | -8.615850e-47 |
| Msa0072720 | Msa1228040 | 0.846914 | 1.609617e-59 | -8.615850e-47 |
| Msa0076290 | Msa1228040 | 0.831538 | 1.577644e-55 | -8.615850e-47 |
| Msa0081270 | Msa1228040 | 0.827180 | 1.803681e-54 | -8.615850e-47 |
| Msa0090550 | Msa1228040 | 0.801335 | 9.454254e-49 | -8.615850e-47 |
| Msa0091730 | Msa1228040 | 0.850809 | 1.335936e-60 | -8.615850e-47 |
| Msa0101500 | Msa1228040 | -0.809389 | 1.938779e-50 | -8.615850e-47 |
| Msa0104670 | Msa1228040 | 0.807433 | 5.067214e-50 | -8.615850e-47 |
| Msa0106620 | Msa1228040 | 0.804662 | 1.939833e-49 | -8.615850e-47 |
| Msa0106710 | Msa1228040 | 0.813345 | 2.683300e-51 | -8.615850e-47 |
| Msa0120280 | Msa1228040 | 0.863175 | 3.002524e-64 | -8.615850e-47 |
| Msa0604290 | Msa1228040 | 0.855934 | 4.518619e-62 | -8.615850e-47 |
| Msa0610550 | Msa1228040 | 0.838150 | 3.412223e-57 | -8.615850e-47 |
| Msa0619780 | Msa1228040 | 0.817904 | 2.588865e-52 | -8.615850e-47 |
| Msa0622790 | Msa1228040 | 0.828088 | 1.091871e-54 | -8.615850e-47 |
| Msa0623990 | Msa1228040 | 0.816719 | 4.784297e-52 | -8.615850e-47 |
| Msa0624060 | Msa1228040 | 0.807665 | 4.524815e-50 | -8.615850e-47 |
| Msa0629240 | Msa1228040 | 0.831075 | 2.050035e-55 | -8.615850e-47 |
| Msa0645530 | Msa1228040 | 0.812875 | 3.401938e-51 | -8.615850e-47 |
| Msa0646020 | Msa1228040 | 0.809390 | 1.938042e-50 | -8.615850e-47 |
| Msa0646420 | Msa1228040 | 0.822476 | 2.321658e-53 | -8.615850e-47 |
| Msa0651560 | Msa1228040 | 0.854703 | 1.031753e-61 | -8.615850e-47 |
| Msa0662220 | Msa1228040 | 0.827017 | 1.973457e-54 | -8.615850e-47 |
| Msa0665530 | Msa1228040 | -0.801507 | 8.715258e-49 | -8.615850e-47 |
| Msa0676130 | Msa1228040 | 0.811399 | 7.139353e-51 | -8.615850e-47 |
| Msa0676180 | Msa1228040 | 0.806905 | 6.554592e-50 | -8.615850e-47 |
| Msa0677530 | Msa1228040 | 0.869689 | 2.565644e-66 | -8.615850e-47 |
| Msa0682680 | Msa1228040 | 0.817969 | 2.502156e-52 | -8.615850e-47 |
| Msa0685090 | Msa1228040 | 0.808947 | 2.411325e-50 | -8.615850e-47 |
| Msa0690310 | Msa1228040 | 0.837259 | 5.775480e-57 | -8.615850e-47 |
| Msa0692980 | Msa1228040 | 0.843088 | 1.737141e-58 | -8.615850e-47 |
| Msa0693330 | Msa1228040 | 0.835568 | 1.555840e-56 | -8.615850e-47 |
| Msa0702720 | Msa1228040 | 0.811442 | 6.988106e-51 | -8.615850e-47 |
| Msa0703800 | Msa1228040 | 0.820376 | 7.087172e-53 | -8.615850e-47 |
| Msa0703810 | Msa1228040 | 0.809760 | 1.613635e-50 | -8.615850e-47 |
| Msa0706230 | Msa1228040 | 0.817660 | 2.939367e-52 | -8.615850e-47 |
| Msa0709120 | Msa1228040 | 0.806055 | 9.905177e-50 | -8.615850e-47 |
| Msa0711650 | Msa1228040 | 0.800207 | 1.605796e-48 | -8.615850e-47 |
| Msa0720690 | Msa1228040 | 0.800559 | 1.361855e-48 | -8.615850e-47 |
| Msa0741440 | Msa1228040 | 0.809206 | 2.121733e-50 | -8.615850e-47 |
| Msa0752450 | Msa1228040 | 0.832171 | 1.100642e-55 | -8.615850e-47 |
| Msa0752700 | Msa1228040 | 0.801534 | 8.607143e-49 | -8.615850e-47 |
| Msa0755330 | Msa1228040 | 0.818315 | 2.090254e-52 | -8.615850e-47 |
| Msa0761310 | Msa1228040 | 0.806115 | 9.619708e-50 | -8.615850e-47 |
| Msa0766140 | Msa1228040 | 0.814143 | 1.789902e-51 | -8.615850e-47 |
| Msa0784480 | Msa1228040 | 0.801471 | 8.864115e-49 | -8.615850e-47 |
| Msa0786750 | Msa1228040 | 0.806081 | 9.779055e-50 | -8.615850e-47 |
| Msa0794970 | Msa1228040 | 0.825379 | 4.841173e-54 | -8.615850e-47 |
| Msa0798900 | Msa1228040 | 0.811839 | 5.727008e-51 | -8.615850e-47 |
| Msa0803780 | Msa1228040 | 0.827104 | 1.881388e-54 | -8.615850e-47 |
| Msa0813530 | Msa1228040 | 0.814875 | 1.233162e-51 | -8.615850e-47 |
| Msa0822500 | Msa1228040 | 0.818548 | 1.851231e-52 | -8.615850e-47 |
| Msa0828590 | Msa1228040 | 0.853748 | 1.946324e-61 | -8.615850e-47 |
| Msa0829300 | Msa1228040 | 0.808052 | 3.742110e-50 | -8.615850e-47 |
| Msa0829330 | Msa1228040 | 0.815822 | 7.591723e-52 | -8.615850e-47 |
| Msa0830660 | Msa1228040 | 0.854801 | 9.662728e-62 | -8.615850e-47 |
| Msa0831100 | Msa1228040 | 0.818133 | 2.297739e-52 | -8.615850e-47 |
| Msa0841820 | Msa1228040 | 0.822783 | 1.969137e-53 | -8.615850e-47 |
| Msa0120990 | Msa1228040 | 0.834586 | 2.750777e-56 | -8.615850e-47 |
| Msa0122530 | Msa1228040 | 0.879620 | 1.074083e-69 | -8.615850e-47 |
| Msa0125450 | Msa1228040 | 0.813248 | 2.818172e-51 | -8.615850e-47 |
| Msa0125540 | Msa1228040 | 0.805129 | 1.549212e-49 | -8.615850e-47 |
| Msa0126790 | Msa1228040 | 0.806992 | 6.282975e-50 | -8.615850e-47 |
| Msa0139670 | Msa1228040 | 0.804788 | 1.825865e-49 | -8.615850e-47 |
| Msa0147980 | Msa1228040 | 0.806847 | 6.742082e-50 | -8.615850e-47 |
| Msa0150860 | Msa1228040 | 0.809028 | 2.317142e-50 | -8.615850e-47 |
| Msa0152850 | Msa1228040 | 0.804175 | 2.450731e-49 | -8.615850e-47 |
| Msa0163510 | Msa1228040 | 0.908686 | 1.303787e-81 | -8.615850e-47 |
| Msa0171870 | Msa1228040 | 0.821828 | 3.280022e-53 | -8.615850e-47 |
| Msa0172980 | Msa1228040 | 0.808375 | 3.194588e-50 | -8.615850e-47 |
| Msa0173800 | Msa1228040 | 0.864402 | 1.247986e-64 | -8.615850e-47 |
| Msa0177960 | Msa1228040 | 0.810168 | 1.317858e-50 | -8.615850e-47 |
| Msa0189530 | Msa1228040 | 0.828343 | 9.477740e-55 | -8.615850e-47 |
| Msa0190870 | Msa1228040 | 0.805625 | 1.219307e-49 | -8.615850e-47 |
| Msa0194920 | Msa1228040 | 0.859243 | 4.732529e-63 | -8.615850e-47 |
| Msa0202490 | Msa1228040 | 0.806035 | 1.000235e-49 | -8.615850e-47 |
| Msa0204960 | Msa1228040 | 0.863542 | 2.311864e-64 | -8.615850e-47 |
| Msa0209350 | Msa1228040 | 0.802192 | 6.303469e-49 | -8.615850e-47 |
| Msa0214550 | Msa1228040 | 0.824163 | 9.366618e-54 | -8.615850e-47 |
| Msa0215990 | Msa1228040 | 0.845934 | 2.978294e-59 | -8.615850e-47 |
| Msa0217670 | Msa1228040 | 0.911785 | 4.102090e-83 | -8.615850e-47 |
| Msa0223330 | Msa1228040 | 0.827085 | 1.900339e-54 | -8.615850e-47 |
| Msa0223340 | Msa1228040 | 0.823146 | 1.620802e-53 | -8.615850e-47 |
| Msa0231800 | Msa1228040 | 0.821854 | 3.236135e-53 | -8.615850e-47 |
| Msa0236920 | Msa1228040 | 0.836371 | 9.730220e-57 | -8.615850e-47 |
| Msa0237210 | Msa1228040 | 0.803212 | 3.881985e-49 | -8.615850e-47 |
| Msa0237300 | Msa1228040 | 0.844164 | 8.958553e-59 | -8.615850e-47 |
| Msa1228040 | Msa1233850 | 0.820176 | 7.876348e-53 | -8.615850e-47 |
| Msa1228040 | Msa1234620 | 0.802476 | 5.510916e-49 | -8.615850e-47 |
| Msa1228040 | Msa1244500 | 0.810221 | 1.283713e-50 | -8.615850e-47 |
| Msa1228040 | Msa1258030 | -0.838544 | 2.700295e-57 | -8.615850e-47 |
| Msa1228040 | Msa1259290 | 0.803602 | 3.224027e-49 | -8.615850e-47 |
| Msa1228040 | Msa1260220 | 0.840778 | 7.082842e-58 | -8.615850e-47 |
| Msa1228040 | Msa1271130 | 0.876320 | 1.533489e-68 | -8.615850e-47 |
| Msa1228040 | Msa1276150 | 0.834569 | 2.778399e-56 | -8.615850e-47 |
| Msa1228040 | Msa1292020 | 0.820462 | 6.772990e-53 | -8.615850e-47 |
| Msa1228040 | Msa1299400 | -0.812306 | 4.531289e-51 | -8.615850e-47 |
| Msa1228040 | Msa1308220 | 0.896788 | 2.636197e-76 | -8.615850e-47 |
| Msa1228040 | Msa1315890 | 0.802374 | 5.784194e-49 | -8.615850e-47 |
| Msa1228040 | Msa1325410 | -0.838085 | 3.544626e-57 | -8.615850e-47 |
| Msa1228040 | Msa1327640 | 0.886038 | 4.840500e-72 | -8.615850e-47 |
| Msa1228040 | Msa1331050 | -0.828328 | 9.554175e-55 | -8.615850e-47 |
| Msa1228040 | Msa1331760 | 0.825951 | 3.542501e-54 | -8.615850e-47 |
| Msa1228040 | Msa1340200 | 0.834300 | 3.245210e-56 | -8.615850e-47 |
| Msa1228040 | Msa1341060 | 0.831629 | 1.497464e-55 | -8.615850e-47 |
| Msa1228040 | Msa1341300 | 0.811061 | 8.450390e-51 | -8.615850e-47 |
| Msa1228040 | Msa1345100 | 0.831801 | 1.358683e-55 | -8.615850e-47 |
| Msa1228040 | Msa1347310 | 0.812376 | 4.373414e-51 | -8.615850e-47 |
| Msa1228040 | Msa1364350 | -0.836539 | 8.820441e-57 | -8.615850e-47 |
| Msa1228040 | Msa1365800 | 0.825715 | 4.030212e-54 | -8.615850e-47 |
| Msa1228040 | Msa1368530 | 0.815268 | 1.008704e-51 | -8.615850e-47 |
| Msa1228040 | Msa1373160 | 0.806357 | 8.554746e-50 | -8.615850e-47 |
| Msa1228040 | Msa1373850 | 0.828855 | 7.128425e-55 | -8.615850e-47 |
| Msa1228040 | Msa1378410 | 0.807804 | 4.225674e-50 | -8.615850e-47 |
| Msa1228040 | Msa1384760 | -0.840043 | 1.102874e-57 | -8.615850e-47 |
| Msa1228040 | Msa1390670 | 0.804848 | 1.773536e-49 | -8.615850e-47 |
| Msa1228040 | Msa1392980 | 0.888065 | 8.216944e-73 | -8.615850e-47 |
| Msa1228040 | Msa1407750 | 0.819506 | 1.120622e-52 | -8.615850e-47 |
| Msa1228040 | Msa1410550 | 0.805604 | 1.231915e-49 | -8.615850e-47 |
| Msa1228040 | Msa1412730 | 0.830079 | 3.593536e-55 | -8.615850e-47 |
| Msa1228040 | Msa1414820 | 0.886267 | 3.967416e-72 | -8.615850e-47 |
| Msa1228040 | Msa1415040 | 0.823620 | 1.255976e-53 | -8.615850e-47 |
| Msa1228040 | Msa1416440 | 0.822173 | 2.728514e-53 | -8.615850e-47 |
| Msa1228040 | Msa1418340 | 0.823376 | 1.431883e-53 | -8.615850e-47 |
| Msa1228040 | Msa1419690 | 0.853030 | 3.127529e-61 | -8.615850e-47 |
| Msa1228040 | Msa1420120 | 0.805398 | 1.361213e-49 | -8.615850e-47 |
| Msa1228040 | Msa1433700 | 0.821564 | 3.776034e-53 | -8.615850e-47 |
| Msa1228040 | Msa1435390 | 0.810647 | 1.038865e-50 | -8.615850e-47 |
| Msa1228040 | Msa1442920 | 0.813715 | 2.224506e-51 | -8.615850e-47 |
| Msa1228040 | Msa1443180 | 0.853126 | 2.936297e-61 | -8.615850e-47 |
| Msa1228040 | Msa1446080 | 0.817141 | 3.846721e-52 | -8.615850e-47 |
| Msa1228040 | Msa1452710 | 0.815088 | 1.105907e-51 | -8.615850e-47 |
| Msa1228040 | Msa1458290 | 0.819468 | 1.143137e-52 | -8.615850e-47 |
| Msa1228040 | Msa1464090 | 0.814710 | 1.341495e-51 | -8.615850e-47 |
| Msa0376630 | Msa1228040 | 0.812688 | 3.737349e-51 | -8.615850e-47 |
| Msa0377290 | Msa1228040 | 0.813888 | 2.038091e-51 | -8.615850e-47 |
| Msa0377820 | Msa1228040 | 0.864623 | 1.063936e-64 | -8.615850e-47 |
| Msa0382370 | Msa1228040 | 0.831132 | 1.985017e-55 | -8.615850e-47 |
| Msa0385500 | Msa1228040 | 0.887466 | 1.391921e-72 | -8.615850e-47 |
| Msa0395980 | Msa1228040 | 0.821672 | 3.564528e-53 | -8.615850e-47 |
| Msa0404630 | Msa1228040 | 0.815027 | 1.140611e-51 | -8.615850e-47 |
| Msa0423550 | Msa1228040 | 0.860304 | 2.268341e-63 | -8.615850e-47 |
| Msa0426580 | Msa1228040 | 0.848099 | 7.602769e-60 | -8.615850e-47 |
| Msa0432160 | Msa1228040 | 0.832004 | 1.210749e-55 | -8.615850e-47 |
| Msa0439960 | Msa1228040 | 0.844422 | 7.636189e-59 | -8.615850e-47 |
| Msa0440510 | Msa1228040 | 0.835875 | 1.300573e-56 | -8.615850e-47 |
| Msa0450400 | Msa1228040 | -0.830954 | 2.194636e-55 | -8.615850e-47 |
| Msa0462600 | Msa1228040 | 0.821934 | 3.100165e-53 | -8.615850e-47 |
| Msa0465500 | Msa1228040 | 0.850010 | 2.238322e-60 | -8.615850e-47 |
| Msa0472930 | Msa1228040 | 0.864836 | 9.125609e-65 | -8.615850e-47 |
| Msa0476680 | Msa1228040 | 0.832818 | 7.606543e-56 | -8.615850e-47 |
| Msa0481970 | Msa1228040 | 0.800613 | 1.327496e-48 | -8.615850e-47 |
| Msa0980540 | Msa1228040 | 0.837447 | 5.170541e-57 | -8.615850e-47 |
| Msa0985180 | Msa1228040 | 0.827366 | 1.627672e-54 | -8.615850e-47 |
| Msa0992510 | Msa1228040 | 0.880209 | 6.625529e-70 | -8.615850e-47 |
| Msa0993190 | Msa1228040 | 0.836826 | 7.453932e-57 | -8.615850e-47 |
| Msa0997970 | Msa1228040 | 0.808154 | 3.560929e-50 | -8.615850e-47 |
| Msa1002960 | Msa1228040 | 0.843885 | 1.063828e-58 | -8.615850e-47 |
| Msa1021520 | Msa1228040 | 0.810540 | 1.095704e-50 | -8.615850e-47 |
| Msa1031660 | Msa1228040 | 0.836301 | 1.014048e-56 | -8.615850e-47 |
| Msa1034500 | Msa1228040 | 0.801905 | 7.221324e-49 | -8.615850e-47 |
| Msa1036300 | Msa1228040 | 0.819160 | 1.344003e-52 | -8.615850e-47 |
| Msa1037520 | Msa1228040 | 0.833277 | 5.849765e-56 | -8.615850e-47 |
| Msa1044680 | Msa1228040 | 0.801814 | 7.538264e-49 | -8.615850e-47 |
| Msa1047760 | Msa1228040 | 0.827486 | 1.523613e-54 | -8.615850e-47 |
| Msa1070720 | Msa1228040 | 0.829849 | 4.089863e-55 | -8.615850e-47 |
| Msa1089450 | Msa1228040 | 0.837335 | 5.523897e-57 | -8.615850e-47 |
| Msa0240900 | Msa1228040 | 0.832677 | 8.245360e-56 | -8.615850e-47 |
| Msa0244640 | Msa1228040 | 0.809492 | 1.842509e-50 | -8.615850e-47 |
| Msa0249860 | Msa1228040 | 0.849308 | 3.513696e-60 | -8.615850e-47 |
| Msa0256140 | Msa1228040 | 0.843045 | 1.783365e-58 | -8.615850e-47 |
| Msa0257490 | Msa1228040 | 0.899466 | 1.926900e-77 | -8.615850e-47 |
| Msa0259240 | Msa1228040 | 0.806345 | 8.607195e-50 | -8.615850e-47 |
| Msa0259680 | Msa1228040 | 0.807323 | 5.345904e-50 | -8.615850e-47 |
| Msa0272300 | Msa1228040 | 0.813990 | 1.935227e-51 | -8.615850e-47 |
| Msa0274720 | Msa1228040 | 0.845485 | 3.944346e-59 | -8.615850e-47 |
| Msa0274980 | Msa1228040 | 0.810835 | 9.461727e-51 | -8.615850e-47 |
| Msa0278570 | Msa1228040 | 0.804682 | 1.921090e-49 | -8.615850e-47 |
| Msa0281530 | Msa1228040 | 0.877702 | 5.085077e-69 | -8.615850e-47 |
| Msa0283330 | Msa1228040 | 0.806155 | 9.436842e-50 | -8.615850e-47 |
| Msa0284180 | Msa1228040 | 0.809634 | 1.717098e-50 | -8.615850e-47 |
| Msa0288010 | Msa1228040 | -0.802491 | 5.471531e-49 | -8.615850e-47 |
| Msa0296630 | Msa1228040 | -0.805091 | 1.577674e-49 | -8.615850e-47 |
| Msa0296790 | Msa1228040 | 0.884898 | 1.293287e-71 | -8.615850e-47 |
| Msa0302570 | Msa1228040 | 0.803168 | 3.964389e-49 | -8.615850e-47 |
| Msa0309970 | Msa1228040 | 0.810497 | 1.119290e-50 | -8.615850e-47 |
| Msa0309990 | Msa1228040 | 0.810488 | 1.124208e-50 | -8.615850e-47 |
| Msa0315520 | Msa1228040 | 0.849496 | 3.115111e-60 | -8.615850e-47 |
| Msa0315690 | Msa1228040 | 0.822420 | 2.391272e-53 | -8.615850e-47 |
| Msa0315980 | Msa1228040 | 0.800361 | 1.494226e-48 | -8.615850e-47 |
| Msa0317970 | Msa1228040 | 0.830737 | 2.481910e-55 | -8.615850e-47 |
| Msa0318680 | Msa1228040 | 0.800526 | 1.382947e-48 | -8.615850e-47 |
| Msa0320590 | Msa1228040 | 0.882702 | 8.348275e-71 | -8.615850e-47 |
| Msa0321620 | Msa1228040 | 0.800939 | 1.138872e-48 | -8.615850e-47 |
| Msa0321670 | Msa1228040 | 0.821135 | 4.741548e-53 | -8.615850e-47 |
| Msa0321690 | Msa1228040 | 0.816036 | 6.800838e-52 | -8.615850e-47 |
| Msa0336290 | Msa1228040 | 0.808819 | 2.567248e-50 | -8.615850e-47 |
| Msa0336450 | Msa1228040 | 0.852219 | 5.328602e-61 | -8.615850e-47 |
| Msa0336540 | Msa1228040 | 0.831608 | 1.515769e-55 | -8.615850e-47 |
| Msa0341480 | Msa1228040 | 0.814218 | 1.723545e-51 | -8.615850e-47 |
| Msa0343500 | Msa1228040 | 0.848189 | 7.182581e-60 | -8.615850e-47 |
| Msa0362890 | Msa1228040 | 0.807688 | 4.472166e-50 | -8.615850e-47 |
| Msa0363640 | Msa1228040 | 0.808799 | 2.592846e-50 | -8.615850e-47 |
| Msa1118860 | Msa1228040 | 0.868582 | 5.866596e-66 | -8.615850e-47 |
| Msa1123350 | Msa1228040 | 0.809622 | 1.727830e-50 | -8.615850e-47 |
| Msa1128270 | Msa1228040 | 0.808598 | 2.863109e-50 | -8.615850e-47 |
| Msa1128280 | Msa1228040 | 0.813658 | 2.289338e-51 | -8.615850e-47 |
| Msa1130400 | Msa1228040 | 0.818647 | 1.757486e-52 | -8.615850e-47 |
| Msa1130980 | Msa1228040 | 0.829143 | 6.070336e-55 | -8.615850e-47 |
| Msa1133590 | Msa1228040 | 0.808214 | 3.457658e-50 | -8.615850e-47 |
| Msa1165230 | Msa1228040 | 0.839035 | 2.015585e-57 | -8.615850e-47 |
| Msa1165270 | Msa1228040 | 0.801559 | 8.505408e-49 | -8.615850e-47 |
| Msa1175350 | Msa1228040 | 0.803093 | 4.109690e-49 | -8.615850e-47 |
| Msa1178580 | Msa1228040 | 0.834868 | 2.337260e-56 | -8.615850e-47 |
| Msa1184230 | Msa1228040 | 0.866540 | 2.645512e-65 | -8.615850e-47 |
| Msa1190100 | Msa1228040 | -0.837967 | 3.802105e-57 | -8.615850e-47 |
| Msa1191180 | Msa1228040 | 0.812231 | 4.703558e-51 | -8.615850e-47 |
| Msa1209440 | Msa1228040 | 0.839461 | 1.562923e-57 | -8.615850e-47 |
| Msa1210900 | Msa1228040 | 0.803527 | 3.340527e-49 | -8.615850e-47 |
| Msa1211230 | Msa1228040 | -0.822568 | 2.209957e-53 | -8.615850e-47 |
| Msa1211420 | Msa1228040 | -0.823560 | 1.296914e-53 | -8.615850e-47 |
| Msa1213040 | Msa1228040 | 0.818792 | 1.629349e-52 | -8.615850e-47 |
| Msa1213890 | Msa1228040 | 0.853622 | 2.116102e-61 | -8.615850e-47 |
| Msa1213980 | Msa1228040 | 0.866787 | 2.207975e-65 | -8.615850e-47 |
| Msa0491000 | Msa1228040 | 0.845072 | 5.101864e-59 | -8.615850e-47 |
| Msa0511440 | Msa1228040 | 0.854383 | 1.276908e-61 | -8.615850e-47 |
| Msa0515340 | Msa1228040 | 0.802826 | 4.666496e-49 | -8.615850e-47 |
| Msa0517590 | Msa1228040 | 0.853646 | 2.082352e-61 | -8.615850e-47 |
| Msa0521010 | Msa1228040 | 0.831836 | 1.331730e-55 | -8.615850e-47 |
| Msa0527540 | Msa1228040 | 0.881192 | 2.944807e-70 | -8.615850e-47 |
| Msa0531530 | Msa1228040 | 0.801263 | 9.779653e-49 | -8.615850e-47 |
| Msa0542290 | Msa1228040 | 0.826446 | 2.701014e-54 | -8.615850e-47 |
| Msa0542560 | Msa1228040 | 0.834133 | 3.573943e-56 | -8.615850e-47 |
| Msa0544160 | Msa1228040 | 0.802267 | 6.085364e-49 | -8.615850e-47 |
| Msa0547160 | Msa1228040 | 0.842733 | 2.159372e-58 | -8.615850e-47 |
| Msa0549450 | Msa1228040 | 0.842308 | 2.798609e-58 | -8.615850e-47 |
| Msa0549950 | Msa1228040 | 0.819613 | 1.059309e-52 | -8.615850e-47 |
| Msa0576790 | Msa1228040 | 0.821092 | 4.852854e-53 | -8.615850e-47 |
| Msa0577680 | Msa1228040 | 0.800251 | 1.572973e-48 | -8.615850e-47 |
| Msa0577770 | Msa1228040 | 0.841869 | 3.657769e-58 | -8.615850e-47 |
| Msa0581010 | Msa1228040 | 0.805974 | 1.029954e-49 | -8.615850e-47 |
| Msa0592270 | Msa1228040 | 0.804629 | 1.970987e-49 | -8.615850e-47 |
| Msa0592330 | Msa1228040 | 0.833100 | 6.475204e-56 | -8.615850e-47 |
| Msa0594050 | Msa1228040 | 0.810542 | 1.094332e-50 | -8.615850e-47 |
| Msa0600420 | Msa1228040 | 0.801838 | 7.452921e-49 | -8.615850e-47 |
| Msa0600450 | Msa1228040 | 0.801521 | 8.658460e-49 | -8.615850e-47 |
| Msa0854000 | Msa1228040 | 0.831889 | 1.291996e-55 | -8.615850e-47 |
| Msa0855870 | Msa1228040 | 0.856856 | 2.423469e-62 | -8.615850e-47 |
| Msa0872250 | Msa1228040 | 0.805707 | 1.171999e-49 | -8.615850e-47 |
| Msa0878220 | Msa1228040 | 0.805663 | 1.197597e-49 | -8.615850e-47 |
| Msa0891590 | Msa1228040 | 0.814030 | 1.896018e-51 | -8.615850e-47 |
| Msa0894400 | Msa1228040 | 0.835427 | 1.689009e-56 | -8.615850e-47 |
| Msa0910960 | Msa1228040 | 0.856142 | 3.928093e-62 | -8.615850e-47 |
| Msa0928180 | Msa1228040 | 0.835337 | 1.779182e-56 | -8.615850e-47 |
| Msa0933760 | Msa1228040 | 0.827751 | 1.315638e-54 | -8.615850e-47 |
| Msa0934140 | Msa1228040 | 0.827069 | 1.917468e-54 | -8.615850e-47 |
| Msa0936480 | Msa1228040 | 0.805226 | 1.478542e-49 | -8.615850e-47 |
| Msa0942240 | Msa1228040 | 0.819190 | 1.322558e-52 | -8.615850e-47 |
| Msa0943970 | Msa1228040 | 0.807590 | 4.692127e-50 | -8.615850e-47 |
| Msa0944020 | Msa1228040 | 0.822085 | 2.860013e-53 | -8.615850e-47 |
| Msa0944200 | Msa1228040 | 0.803906 | 2.787000e-49 | -8.615850e-47 |
| Msa0944520 | Msa1228040 | 0.830043 | 3.666184e-55 | -8.615850e-47 |
| Msa0958000 | Msa1228040 | 0.822064 | 2.892882e-53 | -8.615850e-47 |
| Msa0979310 | Msa1228040 | 0.804238 | 2.378049e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1228040 | MtrunA17_Chr8g0334811 | 99.527 | 423 | 2 | 0 | 1 | 423 | 1 | 423 | 0.0 | 868 |
| Msa1228040 | MtrunA17_Chr2g0322181 | 68.868 | 424 | 124 | 5 | 1 | 423 | 1 | 417 | 0.0 | 535 |
| Msa1228040 | MtrunA17_Chr4g0025401 | 70.283 | 424 | 117 | 6 | 1 | 423 | 1 | 416 | 0.0 | 529 |
| Msa1228040 | MtrunA17_Chr7g0269841 | 37.784 | 352 | 180 | 10 | 15 | 362 | 27 | 343 | 2.04e-59 | 197 |
| Msa1228040 | MtrunA17_Chr2g0333221 | 35.143 | 350 | 202 | 8 | 12 | 345 | 68 | 408 | 1.94e-56 | 193 |
| Msa1228040 | MtrunA17_Chr3g0123861 | 34.421 | 337 | 207 | 8 | 15 | 345 | 83 | 411 | 6.75e-52 | 180 |
| Msa1228040 | MtrunA17_Chr4g0010781 | 36.127 | 346 | 184 | 11 | 15 | 345 | 87 | 410 | 5.86e-51 | 177 |
| Msa1228040 | MtrunA17_Chr6g0478651 | 33.140 | 344 | 211 | 8 | 15 | 346 | 69 | 405 | 2.55e-49 | 175 |
| Msa1228040 | MtrunA17_Chr2g0282741 | 32.500 | 400 | 152 | 10 | 15 | 362 | 5 | 338 | 7.94e-48 | 166 |
| Msa1228040 | MtrunA17_Chr4g0040501 | 30.370 | 405 | 159 | 10 | 15 | 362 | 5 | 343 | 1.49e-43 | 155 |
| Msa1228040 | MtrunA17_Chr2g0324921 | 31.818 | 396 | 156 | 12 | 15 | 362 | 5 | 334 | 1.68e-42 | 152 |
| Msa1228040 | MtrunA17_Chr3g0087741 | 32.081 | 346 | 195 | 14 | 15 | 345 | 90 | 410 | 1.19e-40 | 150 |
| Msa1228040 | MtrunA17_Chr2g0282761 | 33.043 | 345 | 198 | 11 | 15 | 345 | 5 | 330 | 3.32e-40 | 146 |
| Msa1228040 | MtrunA17_Chr3g0138471 | 30.233 | 387 | 165 | 11 | 15 | 362 | 5 | 325 | 3.50e-39 | 143 |
| Msa1228040 | MtrunA17_Chr4g0006391 | 30.000 | 400 | 162 | 12 | 15 | 362 | 5 | 338 | 4.53e-39 | 143 |
| Msa1228040 | MtrunA17_Chr3g0093111 | 28.382 | 377 | 172 | 12 | 15 | 362 | 3 | 310 | 7.09e-35 | 131 |
| Msa1228040 | MtrunA17_Chr5g0426951 | 28.255 | 361 | 225 | 12 | 1 | 347 | 70 | 410 | 5.26e-34 | 132 |
| Msa1228040 | MtrunA17_Chr5g0415751 | 36.735 | 147 | 89 | 2 | 216 | 362 | 18 | 160 | 4.36e-28 | 108 |
| Msa1228040 | MtrunA17_Chr3g0124801 | 36.076 | 158 | 94 | 4 | 189 | 345 | 125 | 276 | 6.96e-21 | 92.4 |
| Msa1228040 | MtrunA17_Chr2g0277721 | 35.948 | 153 | 95 | 2 | 217 | 369 | 117 | 266 | 2.41e-18 | 84.3 |
| Msa1228040 | MtrunA17_Chr8g0352451 | 47.959 | 98 | 40 | 3 | 13 | 106 | 71 | 161 | 5.03e-16 | 79.3 |
| Msa1228040 | MtrunA17_Chr5g0393371 | 43.750 | 96 | 43 | 3 | 13 | 104 | 5 | 93 | 8.16e-15 | 75.9 |
| Msa1228040 | MtrunA17_Chr5g0399201 | 44.048 | 84 | 40 | 1 | 11 | 87 | 9 | 92 | 9.11e-15 | 76.3 |
| Msa1228040 | MtrunA17_Chr1g0159511 | 43.750 | 96 | 43 | 3 | 13 | 104 | 5 | 93 | 1.21e-14 | 75.1 |
| Msa1228040 | MtrunA17_Chr1g0209551 | 52.941 | 68 | 28 | 1 | 16 | 79 | 18 | 85 | 4.47e-14 | 73.6 |
| Msa1228040 | MtrunA17_Chr1g0159491 | 50.000 | 70 | 31 | 2 | 14 | 79 | 6 | 75 | 1.06e-13 | 66.2 |
| Msa1228040 | MtrunA17_Chr7g0263971 | 47.561 | 82 | 37 | 2 | 1 | 77 | 356 | 436 | 1.53e-12 | 69.3 |
| Msa1228040 | MtrunA17_Chr7g0242951 | 49.231 | 65 | 30 | 1 | 16 | 77 | 29 | 93 | 9.17e-12 | 67.0 |
| Msa1228040 | MtrunA17_Chr2g0307061 | 48.529 | 68 | 32 | 1 | 15 | 79 | 111 | 178 | 1.47e-11 | 65.5 |
| Msa1228040 | MtrunA17_Chr1g0206121 | 51.667 | 60 | 26 | 1 | 16 | 72 | 37 | 96 | 1.60e-11 | 65.1 |
| Msa1228040 | MtrunA17_Chr5g0414471 | 47.826 | 69 | 32 | 2 | 16 | 80 | 27 | 95 | 1.88e-11 | 65.5 |
| Msa1228040 | MtrunA17_Chr2g0295821 | 38.462 | 117 | 51 | 5 | 13 | 108 | 103 | 219 | 2.80e-11 | 64.7 |
| Msa1228040 | MtrunA17_Chr7g0271891 | 41.333 | 75 | 36 | 1 | 15 | 81 | 17 | 91 | 3.10e-11 | 61.6 |
| Msa1228040 | MtrunA17_Chr5g0415731 | 28.188 | 149 | 70 | 3 | 12 | 148 | 3 | 126 | 6.22e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1228040 | AT5G22060.1 | 70.047 | 424 | 121 | 4 | 1 | 423 | 1 | 419 | 0.0 | 577 |
| Msa1228040 | AT3G44110.1 | 71.934 | 424 | 114 | 3 | 1 | 423 | 1 | 420 | 0.0 | 562 |
| Msa1228040 | AT3G44110.2 | 75.075 | 333 | 81 | 1 | 1 | 333 | 1 | 331 | 4.13e-167 | 473 |
| Msa1228040 | AT1G80030.4 | 35.509 | 383 | 225 | 10 | 15 | 383 | 76 | 450 | 2.43e-60 | 204 |
| Msa1228040 | AT1G80030.2 | 35.509 | 383 | 225 | 10 | 15 | 383 | 76 | 450 | 3.55e-60 | 204 |
| Msa1228040 | AT1G80030.3 | 35.509 | 383 | 225 | 10 | 15 | 383 | 76 | 450 | 3.55e-60 | 204 |
| Msa1228040 | AT1G80030.1 | 35.509 | 383 | 225 | 10 | 15 | 383 | 76 | 450 | 3.55e-60 | 204 |
| Msa1228040 | AT3G62600.1 | 36.950 | 341 | 172 | 11 | 15 | 347 | 27 | 332 | 4.17e-56 | 189 |
| Msa1228040 | AT2G22360.1 | 34.226 | 336 | 208 | 8 | 15 | 345 | 87 | 414 | 4.91e-51 | 178 |
| Msa1228040 | AT5G48030.1 | 35.632 | 348 | 189 | 14 | 15 | 345 | 95 | 424 | 1.87e-49 | 174 |
| Msa1228040 | AT4G39960.1 | 32.081 | 346 | 215 | 9 | 12 | 345 | 83 | 420 | 3.39e-46 | 165 |
| Msa1228040 | AT4G39960.2 | 32.081 | 346 | 215 | 9 | 12 | 345 | 83 | 420 | 3.39e-46 | 165 |
| Msa1228040 | AT5G25530.2 | 31.579 | 399 | 156 | 11 | 15 | 362 | 5 | 337 | 7.92e-46 | 161 |
| Msa1228040 | AT5G01390.1 | 33.056 | 360 | 166 | 12 | 15 | 345 | 5 | 318 | 1.75e-45 | 160 |
| Msa1228040 | AT5G25530.1 | 30.958 | 407 | 156 | 12 | 15 | 362 | 5 | 345 | 5.26e-43 | 154 |
| Msa1228040 | AT2G20560.1 | 30.402 | 398 | 161 | 11 | 15 | 362 | 5 | 336 | 3.55e-42 | 152 |
| Msa1228040 | AT1G59725.1 | 29.775 | 356 | 210 | 8 | 15 | 362 | 5 | 328 | 5.20e-42 | 151 |
| Msa1228040 | AT3G47940.1 | 28.398 | 412 | 161 | 12 | 15 | 362 | 5 | 346 | 5.09e-40 | 146 |
| Msa1228040 | AT1G10350.1 | 27.139 | 409 | 170 | 11 | 15 | 362 | 5 | 346 | 5.47e-40 | 146 |
| Msa1228040 | AT3G08910.1 | 31.335 | 367 | 150 | 10 | 15 | 345 | 5 | 305 | 1.97e-39 | 144 |
| Msa1228040 | AT4G28480.1 | 29.592 | 392 | 151 | 12 | 15 | 345 | 5 | 332 | 3.49e-36 | 136 |
| Msa1228040 | AT3G17830.1 | 29.683 | 347 | 221 | 10 | 13 | 342 | 62 | 402 | 1.54e-35 | 137 |
| Msa1228040 | AT1G28210.3 | 28.457 | 376 | 233 | 13 | 10 | 373 | 44 | 395 | 2.73e-35 | 135 |
| Msa1228040 | AT1G28210.1 | 28.457 | 376 | 233 | 13 | 10 | 373 | 44 | 395 | 3.10e-35 | 135 |
| Msa1228040 | AT1G28210.2 | 28.457 | 376 | 233 | 13 | 10 | 373 | 44 | 395 | 4.53e-35 | 135 |
| Msa1228040 | AT2G20550.1 | 38.776 | 147 | 86 | 2 | 216 | 362 | 141 | 283 | 4.24e-25 | 104 |
| Msa1228040 | AT2G20550.2 | 38.776 | 147 | 86 | 2 | 216 | 362 | 141 | 283 | 4.24e-25 | 104 |
| Msa1228040 | AT5G01390.4 | 38.587 | 184 | 66 | 7 | 15 | 151 | 5 | 188 | 1.04e-24 | 102 |
| Msa1228040 | AT5G01390.2 | 37.500 | 128 | 78 | 1 | 218 | 345 | 135 | 260 | 3.38e-21 | 93.2 |
| Msa1228040 | AT5G01390.2 | 43.066 | 137 | 51 | 6 | 15 | 124 | 5 | 141 | 1.01e-20 | 92.0 |
| Msa1228040 | AT5G01390.3 | 43.066 | 137 | 51 | 6 | 15 | 124 | 5 | 141 | 5.75e-21 | 91.7 |
| Msa1228040 | AT4G28480.2 | 38.211 | 123 | 74 | 1 | 223 | 345 | 154 | 274 | 6.63e-21 | 92.8 |
| Msa1228040 | AT4G28480.2 | 45.833 | 96 | 43 | 2 | 15 | 101 | 5 | 100 | 1.59e-17 | 82.8 |
| Msa1228040 | AT1G11040.1 | 38.462 | 130 | 78 | 1 | 217 | 346 | 291 | 418 | 1.64e-19 | 90.5 |
| Msa1228040 | AT1G44160.1 | 34.307 | 137 | 86 | 2 | 226 | 362 | 221 | 353 | 9.47e-17 | 81.6 |
| Msa1228040 | AT1G77020.1 | 49.485 | 97 | 36 | 4 | 13 | 104 | 5 | 93 | 3.67e-16 | 80.1 |
| Msa1228040 | AT2G21510.5 | 44.330 | 97 | 48 | 3 | 13 | 103 | 5 | 101 | 5.95e-16 | 79.0 |
| Msa1228040 | AT2G21510.3 | 44.330 | 97 | 48 | 3 | 13 | 103 | 5 | 101 | 9.29e-16 | 78.6 |
| Msa1228040 | AT2G21510.1 | 44.330 | 97 | 48 | 3 | 13 | 103 | 5 | 101 | 9.29e-16 | 78.6 |
| Msa1228040 | AT2G21510.2 | 44.330 | 97 | 48 | 3 | 13 | 103 | 5 | 101 | 9.57e-16 | 78.6 |
| Msa1228040 | AT2G21510.4 | 44.330 | 97 | 48 | 3 | 13 | 103 | 5 | 101 | 9.57e-16 | 78.6 |
| Msa1228040 | AT4G39150.3 | 44.330 | 97 | 48 | 3 | 13 | 103 | 5 | 101 | 8.39e-15 | 75.9 |
| Msa1228040 | AT4G39150.1 | 44.330 | 97 | 48 | 3 | 13 | 103 | 5 | 101 | 8.39e-15 | 75.9 |
| Msa1228040 | AT4G39150.2 | 44.330 | 97 | 48 | 3 | 13 | 103 | 5 | 101 | 8.39e-15 | 75.9 |
| Msa1228040 | AT1G21080.3 | 42.708 | 96 | 43 | 3 | 13 | 104 | 5 | 92 | 8.18e-14 | 73.2 |
| Msa1228040 | AT1G21080.1 | 42.708 | 96 | 43 | 3 | 13 | 104 | 5 | 92 | 8.57e-14 | 73.2 |
| Msa1228040 | AT1G59980.2 | 48.529 | 68 | 31 | 1 | 16 | 79 | 25 | 92 | 1.84e-13 | 71.6 |
| Msa1228040 | AT1G59980.1 | 48.529 | 68 | 31 | 1 | 16 | 79 | 25 | 92 | 3.10e-13 | 71.6 |
| Msa1228040 | AT1G76700.1 | 42.708 | 96 | 44 | 3 | 13 | 104 | 5 | 93 | 1.02e-12 | 69.7 |
| Msa1228040 | AT3G08970.1 | 48.649 | 74 | 35 | 1 | 16 | 86 | 29 | 102 | 1.12e-12 | 70.1 |
| Msa1228040 | AT3G08970.2 | 48.649 | 74 | 35 | 1 | 16 | 86 | 29 | 102 | 1.12e-12 | 70.1 |
| Msa1228040 | AT1G68370.1 | 51.471 | 68 | 29 | 1 | 16 | 79 | 19 | 86 | 1.30e-12 | 69.3 |
| Msa1228040 | AT2G35720.1 | 41.772 | 79 | 39 | 1 | 12 | 83 | 13 | 91 | 1.56e-11 | 66.6 |
| Msa1228040 | AT4G13830.3 | 39.189 | 74 | 39 | 1 | 6 | 73 | 58 | 131 | 1.75e-11 | 63.2 |
| Msa1228040 | AT4G13830.1 | 39.189 | 74 | 39 | 1 | 6 | 73 | 58 | 131 | 1.94e-11 | 62.4 |
| Msa1228040 | AT1G24120.1 | 47.059 | 68 | 32 | 2 | 16 | 79 | 22 | 89 | 2.11e-11 | 65.9 |
| Msa1228040 | AT5G49060.2 | 47.761 | 67 | 32 | 1 | 12 | 75 | 97 | 163 | 4.85e-11 | 64.3 |
| Msa1228040 | AT5G49060.1 | 47.761 | 67 | 32 | 1 | 12 | 75 | 97 | 163 | 4.85e-11 | 64.3 |
| Msa1228040 | AT4G13830.2 | 39.189 | 74 | 39 | 1 | 6 | 73 | 58 | 131 | 5.02e-11 | 62.4 |
| Msa1228040 | AT5G03160.1 | 50.000 | 86 | 34 | 5 | 15 | 95 | 371 | 452 | 5.52e-11 | 64.7 |
| Msa1228040 | AT5G06910.1 | 37.963 | 108 | 52 | 4 | 1 | 102 | 19 | 117 | 6.19e-11 | 63.5 |
| Msa1228040 | AT1G56300.1 | 42.647 | 68 | 31 | 1 | 13 | 72 | 12 | 79 | 8.57e-11 | 60.5 |
Find 134 sgRNAs with CRISPR-Local
Find 354 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTTAGTTATCACAACTTAA+AGG | 0.233868 | 8_2:-3530004 | Msa1228040:five_prime_UTR |
| ACCAAGAATATCGTAATATT+TGG | 0.253782 | 8_2:+3528985 | None:intergenic |
| CTAATTCCAGGCTTTGGCTT+GGG | 0.259172 | 8_2:+3525793 | None:intergenic |
| TGCATGCCACCTATGCTATT+TGG | 0.270088 | 8_2:-3525346 | Msa1228040:three_prime_UTR |
| ACCAAATATTACGATATTCT+TGG | 0.278321 | 8_2:-3528986 | Msa1228040:CDS |
| CAAAGAAGCTATCACTTTCT+AGG | 0.280955 | 8_2:-3527731 | Msa1228040:CDS |
| TCAGGATCCCCACCCTTATC+TGG | 0.281419 | 8_2:+3528896 | None:intergenic |
| CTTCATCGCTGCCTTTCTAT+AGG | 0.293338 | 8_2:+3528925 | None:intergenic |
| TAGTGTTGATTTCCCGGATT+CGG | 0.302065 | 8_2:-3525826 | Msa1228040:CDS |
| AATTAAATGCTCTTGGTATA+AGG | 0.304199 | 8_2:-3525396 | Msa1228040:three_prime_UTR |
| GCCCAGTCCAATTTGCCTTC+TGG | 0.320244 | 8_2:+3526637 | None:intergenic |
| CAAGTTTAGTGTTGATTTCC+CGG | 0.325586 | 8_2:-3525832 | Msa1228040:CDS |
| GGAACTGCTGGAAGGTGTTT+TGG | 0.325803 | 8_2:-3526686 | Msa1228040:CDS |
| TAAGGTGCATCAATCATGTT+TGG | 0.331511 | 8_2:-3529037 | Msa1228040:exon |
| GTGTTATCACTCTTCCTTGT+TGG | 0.332109 | 8_2:+3529007 | None:intergenic |
| AGTGTTGATTTCCCGGATTC+GGG | 0.336340 | 8_2:-3525825 | Msa1228040:CDS |
| TTTAATGTCACACATCTTGA+TGG | 0.337670 | 8_2:-3526059 | Msa1228040:CDS |
| ATGTCTCCCGTGATTGTATC+AGG | 0.343362 | 8_2:+3526188 | None:intergenic |
| AAGATTACCAGAAGGCAAAT+TGG | 0.345945 | 8_2:-3526644 | Msa1228040:CDS |
| AGATGTGGTGCATTCTATAA+AGG | 0.359454 | 8_2:-3527784 | Msa1228040:CDS |
| TCTTGTTTCCCTTGCATTGA+GGG | 0.365622 | 8_2:+3526460 | None:intergenic |
| TTTGTTGTGAAGGACTTGTT+TGG | 0.365754 | 8_2:+3530073 | None:intergenic |
| AATTTGAAAATATTTCTTCA+TGG | 0.373932 | 8_2:+3525304 | None:intergenic |
| TTTAGTTATCACAACTTAAA+GGG | 0.375522 | 8_2:-3530003 | Msa1228040:five_prime_UTR |
| CAAGATGTGTGACATTAAAC+TGG | 0.381451 | 8_2:+3526063 | None:intergenic |
| AAAGAACTGTATGATCAATA+TGG | 0.384904 | 8_2:-3528047 | Msa1228040:CDS |
| CAACACTAAACTTGATGTAT+AGG | 0.388764 | 8_2:+3525841 | None:intergenic |
| CACAATCATCTACCTCCGTT+TGG | 0.390164 | 8_2:+3525733 | None:intergenic |
| TCTATATCAGTTCAAGGAGT+TGG | 0.404313 | 8_2:-3528105 | Msa1228040:intron |
| GCTGGAGGTGCATGTGGAAA+AGG | 0.404757 | 8_2:-3526418 | Msa1228040:CDS |
| TAAAGGGACATCCGAAGTTT+CGG | 0.405532 | 8_2:-3526148 | Msa1228040:CDS |
| CTATATCAGTTCAAGGAGTT+GGG | 0.407932 | 8_2:-3528104 | Msa1228040:intron |
| TCTTGATGGAAGGCAACTAT+TGG | 0.409046 | 8_2:-3526045 | Msa1228040:CDS |
| CGCTCAGCACTTCATATGCT+TGG | 0.415532 | 8_2:+3528081 | None:intergenic |
| GGGGAAAGAAAACCCGAATC+CGG | 0.416779 | 8_2:+3525813 | None:intergenic |
| TCTAATTCCAGGCTTTGGCT+TGG | 0.421594 | 8_2:+3525792 | None:intergenic |
| CACTGTGCTCAAAATGTAAA+GGG | 0.423759 | 8_2:-3527704 | Msa1228040:intron |
| TTGTTGTGAAGGACTTGTTT+GGG | 0.436531 | 8_2:+3530074 | None:intergenic |
| GCATTCTATAAAGGTTTCCT+TGG | 0.436569 | 8_2:-3527775 | Msa1228040:CDS |
| ACTGCATCTTAGTTTACCTT+AGG | 0.437835 | 8_2:-3525499 | Msa1228040:three_prime_UTR |
| TTCTATAAAGGTTTCCTTGG+AGG | 0.438895 | 8_2:-3527772 | Msa1228040:CDS |
| TTACCTGTTCCTTTGCAGTC+AGG | 0.447775 | 8_2:+3526587 | None:intergenic |
| ACAATCATCTACCTCCGTTT+GGG | 0.450435 | 8_2:+3525734 | None:intergenic |
| CTGGAGGTGCATGTGGAAAA+GGG | 0.453294 | 8_2:-3526417 | Msa1228040:CDS |
| TCTTTCCCCAAGCCAAAGCC+TGG | 0.454319 | 8_2:-3525799 | Msa1228040:CDS |
| TGTCCTGACTGCAAAGGAAC+AGG | 0.455803 | 8_2:-3526590 | Msa1228040:intron |
| TTCTGTCTTCTTGCGCGTGA+AGG | 0.455820 | 8_2:+3527816 | None:intergenic |
| AAGGTGCATCAATCATGTTT+GGG | 0.456450 | 8_2:-3529036 | Msa1228040:exon |
| ACCATGAGGCTAACCTTCTC+AGG | 0.464942 | 8_2:+3528878 | None:intergenic |
| CCTGGCTTGATGACTTCGCC+GGG | 0.470037 | 8_2:+3526011 | None:intergenic |
| TGATGAGCACTCGCAGCCTC+GGG | 0.470279 | 8_2:-3525616 | Msa1228040:CDS |
| ATATGAAAATTAAATGCTCT+TGG | 0.470356 | 8_2:-3525403 | Msa1228040:three_prime_UTR |
| TCACGCTCCCTCCGAAACTT+CGG | 0.481300 | 8_2:+3526137 | None:intergenic |
| TGTGGAAAAGGGGATGCAGC+AGG | 0.481538 | 8_2:-3526406 | Msa1228040:CDS |
| TACCAGAAGGCAAATTGGAC+TGG | 0.486122 | 8_2:-3526639 | Msa1228040:CDS |
| ATGATGAGCACTCGCAGCCT+CGG | 0.488061 | 8_2:-3525617 | Msa1228040:CDS |
| TCCTTGGAGGATGTGTATAA+CGG | 0.490673 | 8_2:-3527759 | Msa1228040:CDS |
| CAAGATTACTCAAGAAAAGA+AGG | 0.490692 | 8_2:-3526442 | Msa1228040:CDS |
| TAATTCCAGGCTTTGGCTTG+GGG | 0.490752 | 8_2:+3525794 | None:intergenic |
| ATGAAGAACCATCCAGATAA+GGG | 0.493298 | 8_2:-3528908 | Msa1228040:CDS |
| TACTCAAGAAAAGAAGGTGC+TGG | 0.494841 | 8_2:-3526436 | Msa1228040:CDS |
| GCACTGTGCTCAAAATGTAA+AGG | 0.502752 | 8_2:-3527705 | Msa1228040:CDS |
| ACCTGGCTTGATGACTTCGC+CGG | 0.510274 | 8_2:+3526010 | None:intergenic |
| GGTTGCTTGCTTTGTTGTGA+AGG | 0.511522 | 8_2:+3530063 | None:intergenic |
| GGTGAAGATGCCCTTAAAGA+AGG | 0.514253 | 8_2:-3528026 | Msa1228040:CDS |
| GATGCCCTTAAAGAAGGAAT+GGG | 0.517795 | 8_2:-3528020 | Msa1228040:CDS |
| ATCTTGTTTCCCTTGCATTG+AGG | 0.517889 | 8_2:+3526459 | None:intergenic |
| GATGAAGAACCATCCAGATA+AGG | 0.518235 | 8_2:-3528909 | Msa1228040:CDS |
| GGGAAAGAAAACCCGAATCC+GGG | 0.528601 | 8_2:+3525814 | None:intergenic |
| AGAATTTCGCACGTTGGTGT+TGG | 0.529988 | 8_2:+3529845 | None:intergenic |
| ACCAGAAGGCAAATTGGACT+GGG | 0.532637 | 8_2:-3526638 | Msa1228040:CDS |
| CTGCAATATTGACATCATGC+AGG | 0.534492 | 8_2:+3525700 | None:intergenic |
| AGATGCCCTTAAAGAAGGAA+TGG | 0.543006 | 8_2:-3528021 | Msa1228040:CDS |
| AAGATATTACCTCAAAAGAC+AGG | 0.543836 | 8_2:-3525768 | Msa1228040:CDS |
| ACCAACGTGCGAAATTCTGT+TGG | 0.544347 | 8_2:-3529840 | Msa1228040:five_prime_UTR |
| AATGATTCGAAAATATCAAA+CGG | 0.546049 | 8_2:+3527969 | None:intergenic |
| AATCAAGAAAGCCTATAGAA+AGG | 0.546291 | 8_2:-3528936 | Msa1228040:CDS |
| GATCCCCACCCTTATCTGGA+TGG | 0.550815 | 8_2:+3528900 | None:intergenic |
| TAATCTTCATACCTGTGCCC+TGG | 0.551402 | 8_2:+3526660 | None:intergenic |
| AACTGTAAATAAAGTAACAT+TGG | 0.551520 | 8_2:+3525467 | None:intergenic |
| CCAACGTGCGAAATTCTGTT+GGG | 0.555543 | 8_2:-3529839 | Msa1228040:intron |
| ACAGAAGCAAGGAGAAGATG+TGG | 0.556990 | 8_2:-3527799 | Msa1228040:CDS |
| ACATGGTAGGCCGTTCATGA+AGG | 0.560612 | 8_2:-3525868 | Msa1228040:CDS |
| AGGCAAGAACTTGTCCCAAA+CGG | 0.561214 | 8_2:-3525748 | Msa1228040:CDS |
| AGATAGATGCCCTCAATGCA+AGG | 0.563401 | 8_2:-3526469 | Msa1228040:CDS |
| CCCGGCGAAGTCATCAAGCC+AGG | 0.565992 | 8_2:-3526011 | Msa1228040:intron |
| ATGTCACACATCTTGATGGA+AGG | 0.569738 | 8_2:-3526055 | Msa1228040:CDS |
| TGTTGAGCGCATTGCACCCG+AGG | 0.575241 | 8_2:+3525600 | None:intergenic |
| CATAAAGCTATAAATGATGA+GGG | 0.576223 | 8_2:-3525900 | Msa1228040:CDS |
| ACATAAAGCTATAAATGATG+AGG | 0.577306 | 8_2:-3525901 | Msa1228040:CDS |
| GCATCAATCATGTTTGGGCG+CGG | 0.585791 | 8_2:-3529031 | Msa1228040:exon |
| TGCAATATTGACATCATGCA+GGG | 0.587471 | 8_2:+3525701 | None:intergenic |
| CATGGTAGGCCGTTCATGAA+GGG | 0.587866 | 8_2:-3525867 | Msa1228040:CDS |
| ATGCAGCCTGATACAATCAC+GGG | 0.589655 | 8_2:-3526194 | Msa1228040:intron |
| AGGGACATCCGAAGTTTCGG+AGG | 0.597194 | 8_2:-3526145 | Msa1228040:CDS |
| AGAACCATCCAGATAAGGGT+GGG | 0.600127 | 8_2:-3528904 | Msa1228040:CDS |
| TAAGGGTGGGGATCCTGAGA+AGG | 0.603050 | 8_2:-3528891 | Msa1228040:intron |
| AGCTTAACTGAGGCTCTCTG+TGG | 0.604504 | 8_2:-3526089 | Msa1228040:CDS |
| GAACCATCCAGATAAGGGTG+GGG | 0.607182 | 8_2:-3528903 | Msa1228040:CDS |
| CATCGTCATCATATGCCTCA+CGG | 0.611904 | 8_2:+3525649 | None:intergenic |
| AGGGAATGCCACAACATGGT+AGG | 0.614548 | 8_2:-3525881 | Msa1228040:CDS |
| GAAGGTGCTGGAGGTGCATG+TGG | 0.616316 | 8_2:-3526424 | Msa1228040:CDS |
| GCCGTTATACACATCCTCCA+AGG | 0.620522 | 8_2:+3527758 | None:intergenic |
| AACGGAGGTAGATGATTGTG+AGG | 0.624590 | 8_2:-3525730 | Msa1228040:CDS |
| TATAGGCGTCCCTTCATGAA+CGG | 0.626051 | 8_2:+3525858 | None:intergenic |
| AGCTCAAATTGTGTTCAATG+TGG | 0.627745 | 8_2:+3526108 | None:intergenic |
| TGGAGGTGCATGTGGAAAAG+GGG | 0.628141 | 8_2:-3526416 | Msa1228040:CDS |
| CGCGCAAGAAGACAGAAGCA+AGG | 0.629132 | 8_2:-3527810 | Msa1228040:CDS |
| TCAAATTGTGTTCAATGTGG+AGG | 0.630241 | 8_2:+3526111 | None:intergenic |
| CCCAACAGAATTTCGCACGT+TGG | 0.636763 | 8_2:+3529839 | None:intergenic |
| CACGTCTGTCCTGACTGCAA+AGG | 0.637296 | 8_2:-3526596 | Msa1228040:CDS |
| ATGAACGGCCTACCATGTTG+TGG | 0.637316 | 8_2:+3525873 | None:intergenic |
| AAGAACCATCCAGATAAGGG+TGG | 0.639918 | 8_2:-3528905 | Msa1228040:CDS |
| GTGGAAAAGGGGATGCAGCA+GGG | 0.640568 | 8_2:-3526405 | Msa1228040:CDS |
| TATGCAGCCTGATACAATCA+CGG | 0.643545 | 8_2:-3526195 | Msa1228040:intron |
| GGGACATCCGAAGTTTCGGA+GGG | 0.643722 | 8_2:-3526144 | Msa1228040:CDS |
| TCAAGAAAAGAAGGTGCTGG+AGG | 0.645278 | 8_2:-3526433 | Msa1228040:CDS |
| ATGCCCTTAAAGAAGGAATG+GGG | 0.645770 | 8_2:-3528019 | Msa1228040:CDS |
| TGCCCTTAAAGAAGGAATGG+GGG | 0.646167 | 8_2:-3528018 | Msa1228040:CDS |
| GCCCTTAAAGAAGGAATGGG+GGG | 0.649818 | 8_2:-3528017 | Msa1228040:CDS |
| GATAGATGCCCTCAATGCAA+GGG | 0.651483 | 8_2:-3526468 | Msa1228040:CDS |
| GGTCACAAGATTGTATTCGA+AGG | 0.655024 | 8_2:-3526384 | Msa1228040:CDS |
| ACACAATTTGAGCTTAACTG+AGG | 0.658183 | 8_2:-3526099 | Msa1228040:CDS |
| CAGGTATGAAGATTACCAGA+AGG | 0.662617 | 8_2:-3526652 | Msa1228040:CDS |
| GATGAGGGAATGCCACAACA+TGG | 0.666187 | 8_2:-3525885 | Msa1228040:CDS |
| TGTTTGGGCGCGGACCAACA+AGG | 0.669824 | 8_2:-3529021 | Msa1228040:CDS |
| GCATGATGTCAATATTGCAG+AGG | 0.670479 | 8_2:-3525697 | Msa1228040:CDS |
| ACATTGGCAGATGAATCCTA+AGG | 0.672000 | 8_2:+3525483 | None:intergenic |
| CAAGAACTTGTCCCAAACGG+AGG | 0.676082 | 8_2:-3525745 | Msa1228040:CDS |
| CTATTGGTCAAATCGAACCC+CGG | 0.690957 | 8_2:-3526029 | Msa1228040:CDS |
| CTGGCTTGATGACTTCGCCG+GGG | 0.695154 | 8_2:+3526012 | None:intergenic |
| TATTGTAAAGTGAATTGACA+AGG | 0.710450 | 8_2:+3530042 | None:intergenic |
| AATATTGACATCATGCAGGG+TGG | 0.727859 | 8_2:+3525704 | None:intergenic |
| AAAGAAGCAACAATACCGTG+AGG | 0.744682 | 8_2:-3525664 | Msa1228040:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATTATACTTCATATAAAT+TGG | - | chr8_2:3526600-3526619 | Msa1228040:CDS | 10.0% |
| !!! | TTAAAGTTTCAAAATTTTGT+TGG | - | chr8_2:3525715-3525734 | Msa1228040:CDS | 15.0% |
| !!! | TAAAGTTTCAAAATTTTGTT+GGG | - | chr8_2:3525716-3525735 | Msa1228040:CDS | 15.0% |
| !!! | TCGATTTTATATTGAATTTT+AGG | - | chr8_2:3525753-3525772 | Msa1228040:CDS | 15.0% |
| !!! | GAAAATAAAATTACAACTTT+TGG | + | chr8_2:3525807-3525826 | None:intergenic | 15.0% |
| !!! | AAAGTTGTAATTTTATTTTC+TGG | - | chr8_2:3525807-3525826 | Msa1228040:CDS | 15.0% |
| !!! | AAGTTGTAATTTTATTTTCT+GGG | - | chr8_2:3525808-3525827 | Msa1228040:CDS | 15.0% |
| !!! | AATTCACATTATAAAGTTTT+TGG | - | chr8_2:3526204-3526223 | Msa1228040:intron | 15.0% |
| !!! | TCCTAAAAATATTGTTTTTT+AGG | - | chr8_2:3526990-3527009 | Msa1228040:intron | 15.0% |
| !!! | CCTAAAAATATTGTTTTTTA+GGG | - | chr8_2:3526991-3527010 | Msa1228040:intron | 15.0% |
| !!! | CTAAAAATATTGTTTTTTAG+GGG | - | chr8_2:3526992-3527011 | Msa1228040:intron | 15.0% |
| !! | TGATATAGAAACAATATATT+AGG | + | chr8_2:3527243-3527262 | None:intergenic | 15.0% |
| !! | GAATTCTAGTAAAAAAAAAA+AGG | + | chr8_2:3527930-3527949 | None:intergenic | 15.0% |
| !!! | CAATATTCATTTTGTTATAA+TGG | - | chr8_2:3527958-3527977 | Msa1228040:CDS | 15.0% |
| !! | AATATAATCTTTATCCTATT+AGG | + | chr8_2:3528180-3528199 | None:intergenic | 15.0% |
| !! | TTCAAATTCAAGATAAAATA+TGG | + | chr8_2:3528307-3528326 | None:intergenic | 15.0% |
| !! | AATTTGAAAATATTTCTTCA+TGG | + | chr8_2:3530058-3530077 | None:intergenic | 15.0% |
| !! | TTTAGTTATCACAACTTAAA+GGG | - | chr8_2:3525356-3525375 | Msa1228040:three_prime_UTR | 20.0% |
| !! | AGAAATCAAATAGAAAGAAT+AGG | + | chr8_2:3525562-3525581 | None:intergenic | 20.0% |
| !!! | ATTCTTTCTATTTGATTTCT+AGG | - | chr8_2:3525562-3525581 | Msa1228040:three_prime_UTR | 20.0% |
| !!! | TTCTTTCTATTTGATTTCTA+GGG | - | chr8_2:3525563-3525582 | Msa1228040:three_prime_UTR | 20.0% |
| !! | TTGAATCGATGATAAAATTT+GGG | + | chr8_2:3525653-3525672 | None:intergenic | 20.0% |
| !! | ATTGAATCGATGATAAAATT+TGG | + | chr8_2:3525654-3525673 | None:intergenic | 20.0% |
| !!! | ATTTTATCATCGATTCAATT+AGG | - | chr8_2:3525655-3525674 | Msa1228040:CDS | 20.0% |
| !!! | TTTTATCATCGATTCAATTA+GGG | - | chr8_2:3525656-3525675 | Msa1228040:CDS | 20.0% |
| !!! | AGTTGTAATTTTATTTTCTG+GGG | - | chr8_2:3525809-3525828 | Msa1228040:CDS | 20.0% |
| !!! | AGATTTTGTTGTATGAAAAT+TGG | - | chr8_2:3525938-3525957 | Msa1228040:intron | 20.0% |
| !!! | AAAATAGTTTTATGGACAAT+TGG | - | chr8_2:3526674-3526693 | Msa1228040:CDS | 20.0% |
| !!! | CCCTAAAAAACAATATTTTT+AGG | + | chr8_2:3526994-3527013 | None:intergenic | 20.0% |
| !! | AATGATTCGAAAATATCAAA+CGG | + | chr8_2:3527393-3527412 | None:intergenic | 20.0% |
| !!! | GATATTTTCGAATCATTTTT+TGG | - | chr8_2:3527396-3527415 | Msa1228040:intron | 20.0% |
| !! | AATAAACTTGAAATAGCATA+AGG | + | chr8_2:3527785-3527804 | None:intergenic | 20.0% |
| !!! | GCTATTTCAAGTTTATTTTT+AGG | - | chr8_2:3527788-3527807 | Msa1228040:CDS | 20.0% |
| !! | AACAAAATGAATATTGAATG+TGG | + | chr8_2:3527954-3527973 | None:intergenic | 20.0% |
| !!! | CTGTTTGTTTAAAATTAACT+CGG | - | chr8_2:3528101-3528120 | Msa1228040:intron | 20.0% |
| !! | ATGGTTTATATTAAAACTTC+CGG | + | chr8_2:3528288-3528307 | None:intergenic | 20.0% |
| !!! | TTTGCAATTTTTGATTTATC+AGG | - | chr8_2:3528635-3528654 | Msa1228040:intron | 20.0% |
| !!! | AATTTTTGATTTATCAGGAA+AGG | - | chr8_2:3528640-3528659 | Msa1228040:intron | 20.0% |
| !! | ATGTTAATACTTAGTAAAGA+TGG | - | chr8_2:3529079-3529098 | Msa1228040:intron | 20.0% |
| !! | AACTGTAAATAAAGTAACAT+TGG | + | chr8_2:3529895-3529914 | None:intergenic | 20.0% |
| !! | ATATGAAAATTAAATGCTCT+TGG | - | chr8_2:3529956-3529975 | Msa1228040:five_prime_UTR | 20.0% |
| ! | TATTGTAAAGTGAATTGACA+AGG | + | chr8_2:3525320-3525339 | None:intergenic | 25.0% |
| ! | GTTTAGTTATCACAACTTAA+AGG | - | chr8_2:3525355-3525374 | Msa1228040:three_prime_UTR | 25.0% |
| !! | ATGATAAAATTTGGGATCTA+AGG | + | chr8_2:3525645-3525664 | None:intergenic | 25.0% |
| !!! | TTTATCATCGATTCAATTAG+GGG | - | chr8_2:3525657-3525676 | Msa1228040:CDS | 25.0% |
| !!! | AGTCTTGTTTATAGTTATGA+TGG | - | chr8_2:3525896-3525915 | Msa1228040:CDS | 25.0% |
| !!! | CATTATAAAGTTTTTGGTTG+TGG | - | chr8_2:3526210-3526229 | Msa1228040:intron | 25.0% |
| !!! | GTTTTTGTGTAGTGTTTTTA+AGG | - | chr8_2:3526304-3526323 | Msa1228040:intron | 25.0% |
| ! | ACCAAATATTACGATATTCT+TGG | - | chr8_2:3526373-3526392 | Msa1228040:CDS | 25.0% |
| ! | ACCAAGAATATCGTAATATT+TGG | + | chr8_2:3526377-3526396 | None:intergenic | 25.0% |
| !!! | TTTTTGGTTGTACAAAAAGA+GGG | + | chr8_2:3526896-3526915 | None:intergenic | 25.0% |
| !!! | AAATATTGTTTTTTAGGGGT+AGG | - | chr8_2:3526996-3527015 | Msa1228040:intron | 25.0% |
| !!! | ATTGTTTCTATATCAGTTCA+AGG | - | chr8_2:3527248-3527267 | Msa1228040:intron | 25.0% |
| ! | AAAGAACTGTATGATCAATA+TGG | - | chr8_2:3527312-3527331 | Msa1228040:intron | 25.0% |
| ! | GGATAAATCTACATCATTTA+AGG | + | chr8_2:3528159-3528178 | None:intergenic | 25.0% |
| ! | TGATGTAGATTTATCCTAAT+AGG | - | chr8_2:3528163-3528182 | Msa1228040:intron | 25.0% |
| ! | ACAACCATTTAAAAACAAAC+CGG | + | chr8_2:3528421-3528440 | None:intergenic | 25.0% |
| ! | AATATAGCAAACCTATAACT+TGG | - | chr8_2:3528573-3528592 | Msa1228040:intron | 25.0% |
| !! | ATTATTACTGTTTTCCTGTT+AGG | - | chr8_2:3529024-3529043 | Msa1228040:CDS | 25.0% |
| !! | TTATTACTGTTTTCCTGTTA+GGG | - | chr8_2:3529025-3529044 | Msa1228040:CDS | 25.0% |
| ! | ACATAAAGCTATAAATGATG+AGG | - | chr8_2:3529458-3529477 | Msa1228040:intron | 25.0% |
| ! | CATAAAGCTATAAATGATGA+GGG | - | chr8_2:3529459-3529478 | Msa1228040:intron | 25.0% |
| !! | GTAATATCTTTTCTAATTCC+AGG | + | chr8_2:3529581-3529600 | None:intergenic | 25.0% |
| ! | AATTAAATGCTCTTGGTATA+AGG | - | chr8_2:3529963-3529982 | Msa1228040:five_prime_UTR | 25.0% |
| AGATCTGTTTCGATTCAAAT+AGG | - | chr8_2:3525589-3525608 | Msa1228040:exon | 30.0% | |
| GATCTGTTTCGATTCAAATA+GGG | - | chr8_2:3525590-3525609 | Msa1228040:exon | 30.0% | |
| ! | ATTTTGTTGGGTTTCTGTTA+AGG | - | chr8_2:3525728-3525747 | Msa1228040:CDS | 30.0% |
| !!! | GTAATTTTATTTTCTGGGGA+AGG | - | chr8_2:3525813-3525832 | Msa1228040:CDS | 30.0% |
| ! | TGATGGTATTGAAATTAGCT+TGG | - | chr8_2:3525913-3525932 | Msa1228040:intron | 30.0% |
| ! | GATGGTATTGAAATTAGCTT+GGG | - | chr8_2:3525914-3525933 | Msa1228040:intron | 30.0% |
| TGAATGTAATCACATGTTGA+CGG | - | chr8_2:3526036-3526055 | Msa1228040:CDS | 30.0% | |
| AACACTACACAAAAACAAGA+AGG | + | chr8_2:3526300-3526319 | None:intergenic | 30.0% | |
| AATCAAGAAAGCCTATAGAA+AGG | - | chr8_2:3526423-3526442 | Msa1228040:CDS | 30.0% | |
| AACTTTATTAGCAGAGATAG+AGG | + | chr8_2:3526634-3526653 | None:intergenic | 30.0% | |
| ATTTAAGTGAGGCACAAATT+TGG | + | chr8_2:3526776-3526795 | None:intergenic | 30.0% | |
| !! | CCATCATTTTTGGACATTTT+GGG | - | chr8_2:3526834-3526853 | Msa1228040:intron | 30.0% |
| !!! | GTTTTTGGTTGTACAAAAAG+AGG | + | chr8_2:3526897-3526916 | None:intergenic | 30.0% |
| AAGCAAAAGTTGCAGTATTA+GGG | + | chr8_2:3526935-3526954 | None:intergenic | 30.0% | |
| TAAGCAAAAGTTGCAGTATT+AGG | + | chr8_2:3526936-3526955 | None:intergenic | 30.0% | |
| !! | TTTTTAGGAGAAGTTGAAGT+CGG | + | chr8_2:3526979-3526998 | None:intergenic | 30.0% |
| GGGATAATTCAATATTACTG+TGG | - | chr8_2:3527057-3527076 | Msa1228040:intron | 30.0% | |
| GGATTGAAACAACAAAATCA+AGG | + | chr8_2:3527222-3527241 | None:intergenic | 30.0% | |
| ! | TCATACAGTTCTTTCTTTTC+AGG | + | chr8_2:3527306-3527325 | None:intergenic | 30.0% |
| !! | CACTATTTCTATTTGCTCTT+AGG | - | chr8_2:3527513-3527532 | Msa1228040:intron | 30.0% |
| ! | TATTTCTATTTGCTCTTAGG+TGG | - | chr8_2:3527516-3527535 | Msa1228040:intron | 30.0% |
| ! | GCATCAGTTAATTGCATTTT+TGG | - | chr8_2:3527876-3527895 | Msa1228040:intron | 30.0% |
| ! | AAAAGGCTTAAGTGTACTTT+TGG | + | chr8_2:3527913-3527932 | None:intergenic | 30.0% |
| !! | CATTTTGTTATAATGGTGTC+TGG | - | chr8_2:3527965-3527984 | Msa1228040:CDS | 30.0% |
| ACATGACAAGTATATGTGTA+CGG | - | chr8_2:3528017-3528036 | Msa1228040:CDS | 30.0% | |
| AAACAATAGAAGCTCTATCA+TGG | + | chr8_2:3528208-3528227 | None:intergenic | 30.0% | |
| !! | TCATGATTTGTTGTGATGAT+GGG | - | chr8_2:3528379-3528398 | Msa1228040:intron | 30.0% |
| !!! | TTCTCCGGTTTGTTTTTAAA+TGG | - | chr8_2:3528414-3528433 | Msa1228040:intron | 30.0% |
| !!! | ACAGTCTTGTTTTAATTGCT+TGG | - | chr8_2:3528519-3528538 | Msa1228040:intron | 30.0% |
| CAAGATTACTCAAGAAAAGA+AGG | - | chr8_2:3528917-3528936 | Msa1228040:CDS | 30.0% | |
| !! | TTGATGATTTTGAGTCTTCA+TGG | - | chr8_2:3529109-3529128 | Msa1228040:intron | 30.0% |
| ! | AGTTTTTGTCTTGCAAGTAA+AGG | - | chr8_2:3529194-3529213 | Msa1228040:intron | 30.0% |
| ! | GTTTTTGTCTTGCAAGTAAA+GGG | - | chr8_2:3529195-3529214 | Msa1228040:intron | 30.0% |
| TTTAATGTCACACATCTTGA+TGG | - | chr8_2:3529300-3529319 | Msa1228040:intron | 30.0% | |
| CCAAAAAAAATCTTAGTACC+TGG | + | chr8_2:3529369-3529388 | None:intergenic | 30.0% | |
| !!! | CCAGGTACTAAGATTTTTTT+TGG | - | chr8_2:3529366-3529385 | Msa1228040:intron | 30.0% |
| !! | GAATGTTCATGTTACTTTGT+AGG | - | chr8_2:3529432-3529451 | Msa1228040:intron | 30.0% |
| CAACACTAAACTTGATGTAT+AGG | + | chr8_2:3529521-3529540 | None:intergenic | 30.0% | |
| AAGATATTACCTCAAAAGAC+AGG | - | chr8_2:3529591-3529610 | Msa1228040:intron | 30.0% | |
| ! | TTGTTGTGAAGGACTTGTTT+GGG | + | chr8_2:3525288-3525307 | None:intergenic | 35.0% |
| ! | TTTGTTGTGAAGGACTTGTT+TGG | + | chr8_2:3525289-3525308 | None:intergenic | 35.0% |
| ACGTTCTTCTTCTTCTTCAA+GGG | + | chr8_2:3525486-3525505 | None:intergenic | 35.0% | |
| ! | AATTTGGGATCTAAGGAACA+CGG | + | chr8_2:3525638-3525657 | None:intergenic | 35.0% |
| ! | ATATTGTGCTTGATTTGAGC+TGG | - | chr8_2:3525973-3525992 | Msa1228040:intron | 35.0% |
| TAAGGTGCATCAATCATGTT+TGG | - | chr8_2:3526322-3526341 | Msa1228040:intron | 35.0% | |
| AAGGTGCATCAATCATGTTT+GGG | - | chr8_2:3526323-3526342 | Msa1228040:intron | 35.0% | |
| ATGAAGAACCATCCAGATAA+GGG | - | chr8_2:3526451-3526470 | Msa1228040:CDS | 35.0% | |
| ATGTGAATACCCTGCTATTA+CGG | - | chr8_2:3526545-3526564 | Msa1228040:intron | 35.0% | |
| AGTCAGAATGCAAACAAACA+AGG | + | chr8_2:3526572-3526591 | None:intergenic | 35.0% | |
| GTCAAGACTTCATTTAAGTG+AGG | + | chr8_2:3526787-3526806 | None:intergenic | 35.0% | |
| !!! | TATAAGTGGAGGGCATTTTT+CGG | + | chr8_2:3526813-3526832 | None:intergenic | 35.0% |
| AAATGATGGCTATAAGTGGA+GGG | + | chr8_2:3526823-3526842 | None:intergenic | 35.0% | |
| AAAATGATGGCTATAAGTGG+AGG | + | chr8_2:3526824-3526843 | None:intergenic | 35.0% | |
| CCAAAAATGATGGCTATAAG+TGG | + | chr8_2:3526827-3526846 | None:intergenic | 35.0% | |
| ! | CCACTTATAGCCATCATTTT+TGG | - | chr8_2:3526824-3526843 | Msa1228040:intron | 35.0% |
| !! | GCCATCATTTTTGGACATTT+TGG | - | chr8_2:3526833-3526852 | Msa1228040:intron | 35.0% |
| CCCAAAATGTCCAAAAATGA+TGG | + | chr8_2:3526837-3526856 | None:intergenic | 35.0% | |
| ! | TTATTCACCCGAGTCTTTTA+GGG | + | chr8_2:3526863-3526882 | None:intergenic | 35.0% |
| !!! | TATTGTTTTTTAGGGGTAGG+CGG | - | chr8_2:3526999-3527018 | Msa1228040:intron | 35.0% |
| TGTTCTTATGCATACTTCTG+TGG | - | chr8_2:3527162-3527181 | Msa1228040:intron | 35.0% | |
| AAATCAAGGTCAGCAACAAA+AGG | + | chr8_2:3527208-3527227 | None:intergenic | 35.0% | |
| TCTATATCAGTTCAAGGAGT+TGG | - | chr8_2:3527254-3527273 | Msa1228040:intron | 35.0% | |
| CTATATCAGTTCAAGGAGTT+GGG | - | chr8_2:3527255-3527274 | Msa1228040:intron | 35.0% | |
| !!! | TTCGAATCATTTTTTGGTGC+AGG | - | chr8_2:3527402-3527421 | Msa1228040:intron | 35.0% |
| AGATGTGGTGCATTCTATAA+AGG | - | chr8_2:3527575-3527594 | Msa1228040:intron | 35.0% | |
| GCATTCTATAAAGGTTTCCT+TGG | - | chr8_2:3527584-3527603 | Msa1228040:intron | 35.0% | |
| TTCTATAAAGGTTTCCTTGG+AGG | - | chr8_2:3527587-3527606 | Msa1228040:intron | 35.0% | |
| CAAAGAAGCTATCACTTTCT+AGG | - | chr8_2:3527628-3527647 | Msa1228040:intron | 35.0% | |
| CACTGTGCTCAAAATGTAAA+GGG | - | chr8_2:3527655-3527674 | Msa1228040:intron | 35.0% | |
| TGCTCAAAATGTAAAGGGTA+CGG | - | chr8_2:3527660-3527679 | Msa1228040:intron | 35.0% | |
| GAGTACAGAACATTTAAGCA+TGG | + | chr8_2:3527692-3527711 | None:intergenic | 35.0% | |
| AGGATCTCCATGCTTATATT+TGG | - | chr8_2:3527808-3527827 | Msa1228040:CDS | 35.0% | |
| AAAGCTTTCATAGAGAAGCA+GGG | + | chr8_2:3527856-3527875 | None:intergenic | 35.0% | |
| !! | GTGTACTTTTGGAAAACTGA+GGG | + | chr8_2:3527902-3527921 | None:intergenic | 35.0% |
| !! | AGTGTACTTTTGGAAAACTG+AGG | + | chr8_2:3527903-3527922 | None:intergenic | 35.0% |
| !!! | CTAACACTATTTTTTAGCCC+CGG | + | chr8_2:3528057-3528076 | None:intergenic | 35.0% |
| TTTGTCCAATCCATGTAAAC+AGG | - | chr8_2:3528225-3528244 | Msa1228040:intron | 35.0% | |
| TAAGACCTGTTTACATGGAT+TGG | + | chr8_2:3528233-3528252 | None:intergenic | 35.0% | |
| CAACATAAGACCTGTTTACA+TGG | + | chr8_2:3528238-3528257 | None:intergenic | 35.0% | |
| ! | CATGTAAACAGGTCTTATGT+TGG | - | chr8_2:3528236-3528255 | Msa1228040:intron | 35.0% |
| TTATGTTGGACACAAACCAA+TGG | - | chr8_2:3528250-3528269 | Msa1228040:intron | 35.0% | |
| !! | GAATCCCTTTAAAGTGTGTA+AGG | - | chr8_2:3528324-3528343 | Msa1228040:intron | 35.0% |
| !! | CTCATGATTTGTTGTGATGA+TGG | - | chr8_2:3528378-3528397 | Msa1228040:intron | 35.0% |
| AAAAAGATTCGACTTCCCTA+CGG | + | chr8_2:3528484-3528503 | None:intergenic | 35.0% | |
| TAGCAAACCTATAACTTGGT+AGG | - | chr8_2:3528577-3528596 | Msa1228040:intron | 35.0% | |
| AGCAAACCTATAACTTGGTA+GGG | - | chr8_2:3528578-3528597 | Msa1228040:intron | 35.0% | |
| ATGAATCCCTACCAAGTTAT+AGG | + | chr8_2:3528587-3528606 | None:intergenic | 35.0% | |
| ATCAGGAAAGGTTCAAAAAG+TGG | - | chr8_2:3528652-3528671 | Msa1228040:intron | 35.0% | |
| AAGATTACCAGAAGGCAAAT+TGG | - | chr8_2:3528715-3528734 | Msa1228040:intron | 35.0% | |
| CAGAAGCAGCTTAACAAATA+TGG | + | chr8_2:3528813-3528832 | None:intergenic | 35.0% | |
| TATAAACCACAATCCCTAAC+AGG | + | chr8_2:3529041-3529060 | None:intergenic | 35.0% | |
| GACTCAAAATCATCAACTTC+TGG | + | chr8_2:3529105-3529124 | None:intergenic | 35.0% | |
| TCAAATTGTGTTCAATGTGG+AGG | + | chr8_2:3529251-3529270 | None:intergenic | 35.0% | |
| AGCTCAAATTGTGTTCAATG+TGG | + | chr8_2:3529254-3529273 | None:intergenic | 35.0% | |
| ACACAATTTGAGCTTAACTG+AGG | - | chr8_2:3529260-3529279 | Msa1228040:intron | 35.0% | |
| CAAGATGTGTGACATTAAAC+TGG | + | chr8_2:3529299-3529318 | None:intergenic | 35.0% | |
| !! | CAAGTTTAGTGTTGATTTCC+CGG | - | chr8_2:3529527-3529546 | Msa1228040:intron | 35.0% |
| ! | TCTTTTCTAATTCCAGGCTT+TGG | + | chr8_2:3529575-3529594 | None:intergenic | 35.0% |
| TGCAATATTGACATCATGCA+GGG | + | chr8_2:3529661-3529680 | None:intergenic | 35.0% | |
| ACTGCATCTTAGTTTACCTT+AGG | - | chr8_2:3529860-3529879 | Msa1228040:five_prime_UTR | 35.0% | |
| CAAAAACCAAATAGCATAGG+TGG | + | chr8_2:3530022-3530041 | None:intergenic | 35.0% | |
| !!! | CACCTATGCTATTTGGTTTT+TGG | - | chr8_2:3530020-3530039 | Msa1228040:five_prime_UTR | 35.0% |
| AGCCAAAAACCAAATAGCAT+AGG | + | chr8_2:3530025-3530044 | None:intergenic | 35.0% | |
| ! | TCTCTCTTTTTCTCTCTTCG+AGG | - | chr8_2:3525447-3525466 | Msa1228040:three_prime_UTR | 40.0% |
| ! | CTCTCTTTTTCTCTCTTCGA+GGG | - | chr8_2:3525448-3525467 | Msa1228040:three_prime_UTR | 40.0% |
| GACGTTCTTCTTCTTCTTCA+AGG | + | chr8_2:3525487-3525506 | None:intergenic | 40.0% | |
| ATGTAATCACATGTTGACGG+TGG | - | chr8_2:3526039-3526058 | Msa1228040:CDS | 40.0% | |
| GTGTTATCACTCTTCCTTGT+TGG | + | chr8_2:3526355-3526374 | None:intergenic | 40.0% | |
| GATGAAGAACCATCCAGATA+AGG | - | chr8_2:3526450-3526469 | Msa1228040:CDS | 40.0% | |
| ACAAAGTAGCAGTAACCATG+AGG | + | chr8_2:3526498-3526517 | None:intergenic | 40.0% | |
| AAACAAGGACCGTAATAGCA+GGG | + | chr8_2:3526557-3526576 | None:intergenic | 40.0% | |
| TTGGGTATCCCTAAAAGACT+CGG | - | chr8_2:3526852-3526871 | Msa1228040:intron | 40.0% | |
| ! | GTTATTCACCCGAGTCTTTT+AGG | + | chr8_2:3526864-3526883 | None:intergenic | 40.0% |
| TACAAAAAGAGGGAAGCTGT+AGG | + | chr8_2:3526886-3526905 | None:intergenic | 40.0% | |
| ! | CTTTCAGACACATGGGTTTT+TGG | + | chr8_2:3526912-3526931 | None:intergenic | 40.0% |
| ATTAGGGCTTTCAGACACAT+GGG | + | chr8_2:3526919-3526938 | None:intergenic | 40.0% | |
| TATTAGGGCTTTCAGACACA+TGG | + | chr8_2:3526920-3526939 | None:intergenic | 40.0% | |
| TTGCTTATCCTTCTCTTGTG+CGG | - | chr8_2:3526949-3526968 | Msa1228040:intron | 40.0% | |
| ATATTACTGTGGCATGCAGA+TGG | - | chr8_2:3527068-3527087 | Msa1228040:intron | 40.0% | |
| AGATGCCCTTAAAGAAGGAA+TGG | - | chr8_2:3527338-3527357 | Msa1228040:intron | 40.0% | |
| GATGCCCTTAAAGAAGGAAT+GGG | - | chr8_2:3527339-3527358 | Msa1228040:intron | 40.0% | |
| ATGCCCTTAAAGAAGGAATG+GGG | - | chr8_2:3527340-3527359 | Msa1228040:intron | 40.0% | |
| !!! | TCATTTTTTGGTGCAGGCTT+TGG | - | chr8_2:3527408-3527427 | Msa1228040:intron | 40.0% |
| TTCTATTTGCTCTTAGGTGG+TGG | - | chr8_2:3527519-3527538 | Msa1228040:intron | 40.0% | |
| TCCTTGGAGGATGTGTATAA+CGG | - | chr8_2:3527600-3527619 | Msa1228040:intron | 40.0% | |
| GCACTGTGCTCAAAATGTAA+AGG | - | chr8_2:3527654-3527673 | Msa1228040:intron | 40.0% | |
| AAAGTGGCATGTGGAATTGT+GGG | + | chr8_2:3527749-3527768 | None:intergenic | 40.0% | |
| TAAAGTGGCATGTGGAATTG+TGG | + | chr8_2:3527750-3527769 | None:intergenic | 40.0% | |
| !! | TTGCATTCTAAAGTGGCATG+TGG | + | chr8_2:3527758-3527777 | None:intergenic | 40.0% |
| ! | AGGTGCATTGCATTCTAAAG+TGG | + | chr8_2:3527765-3527784 | None:intergenic | 40.0% |
| TTTCATAGAGAAGCAGGGTA+GGG | + | chr8_2:3527851-3527870 | None:intergenic | 40.0% | |
| CAAAGCTTTCATAGAGAAGC+AGG | + | chr8_2:3527857-3527876 | None:intergenic | 40.0% | |
| CCAATGGTGTTTGAGTAAAC+CGG | - | chr8_2:3528266-3528285 | Msa1228040:intron | 40.0% | |
| !! | TCCCTTTAAAGTGTGTAAGG+TGG | - | chr8_2:3528327-3528346 | Msa1228040:intron | 40.0% |
| CCCACCTTACACACTTTAAA+GGG | + | chr8_2:3528331-3528350 | None:intergenic | 40.0% | |
| !! | CCCTTTAAAGTGTGTAAGGT+GGG | - | chr8_2:3528328-3528347 | Msa1228040:intron | 40.0% |
| TCCCACCTTACACACTTTAA+AGG | + | chr8_2:3528332-3528351 | None:intergenic | 40.0% | |
| ! | AGGGAAGTCGAATCTTTTTG+TGG | - | chr8_2:3528485-3528504 | Msa1228040:intron | 40.0% |
| CAGGTATGAAGATTACCAGA+AGG | - | chr8_2:3528707-3528726 | Msa1228040:intron | 40.0% | |
| AACAATAATGCATGAGCTGC+TGG | + | chr8_2:3528847-3528866 | None:intergenic | 40.0% | |
| AGCTCATGCATTATTGTTGC+AGG | - | chr8_2:3528849-3528868 | Msa1228040:intron | 40.0% | |
| ! | TCTTGTTTCCCTTGCATTGA+GGG | + | chr8_2:3528902-3528921 | None:intergenic | 40.0% |
| ! | ATCTTGTTTCCCTTGCATTG+AGG | + | chr8_2:3528903-3528922 | None:intergenic | 40.0% |
| ! | TACTCAAGAAAAGAAGGTGC+TGG | - | chr8_2:3528923-3528942 | Msa1228040:CDS | 40.0% |
| GGTCACAAGATTGTATTCGA+AGG | - | chr8_2:3528975-3528994 | Msa1228040:CDS | 40.0% | |
| ! | TGTTTTCCTGTTAGGGATTG+TGG | - | chr8_2:3529032-3529051 | Msa1228040:exon | 40.0% |
| TATGCAGCCTGATACAATCA+CGG | - | chr8_2:3529164-3529183 | Msa1228040:intron | 40.0% | |
| TAAAGGGACATCCGAAGTTT+CGG | - | chr8_2:3529211-3529230 | Msa1228040:intron | 40.0% | |
| ATGTCACACATCTTGATGGA+AGG | - | chr8_2:3529304-3529323 | Msa1228040:intron | 40.0% | |
| TCTTGATGGAAGGCAACTAT+TGG | - | chr8_2:3529314-3529333 | Msa1228040:intron | 40.0% | |
| !! | TAGTGTTGATTTCCCGGATT+CGG | - | chr8_2:3529533-3529552 | Msa1228040:intron | 40.0% |
| ! | AAGTTCTTGCCTGTCTTTTG+AGG | + | chr8_2:3529603-3529622 | None:intergenic | 40.0% |
| ACAATCATCTACCTCCGTTT+GGG | + | chr8_2:3529628-3529647 | None:intergenic | 40.0% | |
| AATATTGACATCATGCAGGG+TGG | + | chr8_2:3529658-3529677 | None:intergenic | 40.0% | |
| CTGCAATATTGACATCATGC+AGG | + | chr8_2:3529662-3529681 | None:intergenic | 40.0% | |
| GCATGATGTCAATATTGCAG+AGG | - | chr8_2:3529662-3529681 | Msa1228040:intron | 40.0% | |
| AAAGAAGCAACAATACCGTG+AGG | - | chr8_2:3529695-3529714 | Msa1228040:intron | 40.0% | |
| ACATTGGCAGATGAATCCTA+AGG | + | chr8_2:3529879-3529898 | None:intergenic | 40.0% | |
| ! | GGTTGCTTGCTTTGTTGTGA+AGG | + | chr8_2:3525299-3525318 | None:intergenic | 45.0% |
| AGAATTTCGCACGTTGGTGT+TGG | + | chr8_2:3525517-3525536 | None:intergenic | 45.0% | |
| ACCAACGTGCGAAATTCTGT+TGG | - | chr8_2:3525519-3525538 | Msa1228040:three_prime_UTR | 45.0% | |
| CCAACGTGCGAAATTCTGTT+GGG | - | chr8_2:3525520-3525539 | Msa1228040:three_prime_UTR | 45.0% | |
| AGTGAAGGAGAGTTTGTGAG+AGG | - | chr8_2:3526086-3526105 | Msa1228040:CDS | 45.0% | |
| GTGAAGGAGAGTTTGTGAGA+GGG | - | chr8_2:3526087-3526106 | Msa1228040:CDS | 45.0% | |
| GAGGAAGAGATGATGTGGAA+GGG | - | chr8_2:3526109-3526128 | Msa1228040:CDS | 45.0% | |
| AGGAAGAGATGATGTGGAAG+GGG | - | chr8_2:3526110-3526129 | Msa1228040:CDS | 45.0% | |
| GAGATGCTCTGTGCTTGATT+CGG | - | chr8_2:3526178-3526197 | Msa1228040:CDS | 45.0% | |
| CTTCATCGCTGCCTTTCTAT+AGG | + | chr8_2:3526437-3526456 | None:intergenic | 45.0% | |
| AAGAACCATCCAGATAAGGG+TGG | - | chr8_2:3526454-3526473 | Msa1228040:CDS | 45.0% | |
| AGAACCATCCAGATAAGGGT+GGG | - | chr8_2:3526455-3526474 | Msa1228040:CDS | 45.0% | |
| CAAACAAGGACCGTAATAGC+AGG | + | chr8_2:3526558-3526577 | None:intergenic | 45.0% | |
| ATTCGTAGCGCTCACTATTG+TGG | - | chr8_2:3526750-3526769 | Msa1228040:intron | 45.0% | |
| TGGGTATCCCTAAAAGACTC+GGG | - | chr8_2:3526853-3526872 | Msa1228040:intron | 45.0% | |
| TAGGAGAAGTTGAAGTCGGA+AGG | + | chr8_2:3526975-3526994 | None:intergenic | 45.0% | |
| ATTATCCCTCAAGTAGCCAG+TGG | + | chr8_2:3527045-3527064 | None:intergenic | 45.0% | |
| GGTGAAGATGCCCTTAAAGA+AGG | - | chr8_2:3527333-3527352 | Msa1228040:intron | 45.0% | |
| TGCCCTTAAAGAAGGAATGG+GGG | - | chr8_2:3527341-3527360 | Msa1228040:intron | 45.0% | |
| TCCCCCCATTCCTTCTTTAA+GGG | + | chr8_2:3527346-3527365 | None:intergenic | 45.0% | |
| !!! | TTTTTTGGTGCAGGCTTTGG+TGG | - | chr8_2:3527411-3527430 | Msa1228040:intron | 45.0% |
| ACAGAAGCAAGGAGAAGATG+TGG | - | chr8_2:3527560-3527579 | Msa1228040:intron | 45.0% | |
| GGAGCTGCCAAATATAAGCA+TGG | + | chr8_2:3527818-3527837 | None:intergenic | 45.0% | |
| GCAGGGTAGGGAAATATTTG+CGG | + | chr8_2:3527839-3527858 | None:intergenic | 45.0% | |
| CTTTCATAGAGAAGCAGGGT+AGG | + | chr8_2:3527852-3527871 | None:intergenic | 45.0% | |
| TACGGACCACACATTGTAAC+CGG | - | chr8_2:3528035-3528054 | Msa1228040:CDS | 45.0% | |
| CCGGTTTACTCAAACACCAT+TGG | + | chr8_2:3528269-3528288 | None:intergenic | 45.0% | |
| CTAGTTAGTTGCTCACCGTA+GGG | - | chr8_2:3528466-3528485 | Msa1228040:intron | 45.0% | |
| GGTTCAAAAAGTGGAACTGC+TGG | - | chr8_2:3528661-3528680 | Msa1228040:intron | 45.0% | |
| CAAAAAGTGGAACTGCTGGA+AGG | - | chr8_2:3528665-3528684 | Msa1228040:intron | 45.0% | |
| TAATCTTCATACCTGTGCCC+TGG | + | chr8_2:3528702-3528721 | None:intergenic | 45.0% | |
| TACCAGAAGGCAAATTGGAC+TGG | - | chr8_2:3528720-3528739 | Msa1228040:intron | 45.0% | |
| ACCAGAAGGCAAATTGGACT+GGG | - | chr8_2:3528721-3528740 | Msa1228040:intron | 45.0% | |
| TTACCTGTTCCTTTGCAGTC+AGG | + | chr8_2:3528775-3528794 | None:intergenic | 45.0% | |
| GACTGCAAAGGAACAGGTAA+TGG | - | chr8_2:3528775-3528794 | Msa1228040:intron | 45.0% | |
| ATGCATTATTGTTGCAGGCG+AGG | - | chr8_2:3528854-3528873 | Msa1228040:intron | 45.0% | |
| AGATAGATGCCCTCAATGCA+AGG | - | chr8_2:3528890-3528909 | Msa1228040:intron | 45.0% | |
| GATAGATGCCCTCAATGCAA+GGG | - | chr8_2:3528891-3528910 | Msa1228040:intron | 45.0% | |
| !! | TCAAGAAAAGAAGGTGCTGG+AGG | - | chr8_2:3528926-3528945 | Msa1228040:CDS | 45.0% |
| ATGCAGCCTGATACAATCAC+GGG | - | chr8_2:3529165-3529184 | Msa1228040:intron | 45.0% | |
| ATGTCTCCCGTGATTGTATC+AGG | + | chr8_2:3529174-3529193 | None:intergenic | 45.0% | |
| CTATTGGTCAAATCGAACCC+CGG | - | chr8_2:3529330-3529349 | Msa1228040:intron | 45.0% | |
| TATAGGCGTCCCTTCATGAA+CGG | + | chr8_2:3529504-3529523 | None:intergenic | 45.0% | |
| !! | AGTGTTGATTTCCCGGATTC+GGG | - | chr8_2:3529534-3529553 | Msa1228040:intron | 45.0% |
| !! | TAATTCCAGGCTTTGGCTTG+GGG | + | chr8_2:3529568-3529587 | None:intergenic | 45.0% |
| ! | CTAATTCCAGGCTTTGGCTT+GGG | + | chr8_2:3529569-3529588 | None:intergenic | 45.0% |
| ! | TCTAATTCCAGGCTTTGGCT+TGG | + | chr8_2:3529570-3529589 | None:intergenic | 45.0% |
| AGGCAAGAACTTGTCCCAAA+CGG | - | chr8_2:3529611-3529630 | Msa1228040:intron | 45.0% | |
| CACAATCATCTACCTCCGTT+TGG | + | chr8_2:3529629-3529648 | None:intergenic | 45.0% | |
| AACGGAGGTAGATGATTGTG+AGG | - | chr8_2:3529629-3529648 | Msa1228040:intron | 45.0% | |
| CATCGTCATCATATGCCTCA+CGG | + | chr8_2:3529713-3529732 | None:intergenic | 45.0% | |
| TGCATGCCACCTATGCTATT+TGG | - | chr8_2:3530013-3530032 | Msa1228040:five_prime_UTR | 45.0% | |
| !! | AAAAAAAAAAAAAAAAACTT+CGG | + | chr8_2:3525865-3525884 | None:intergenic | 5.0% |
| !! | AAATAAAATACAAAAAATTA+AGG | + | chr8_2:3526263-3526282 | None:intergenic | 5.0% |
| !!! | AAATAAATAAAATAGTTTTA+TGG | - | chr8_2:3526666-3526685 | Msa1228040:CDS | 5.0% |
| CCCAACAGAATTTCGCACGT+TGG | + | chr8_2:3525523-3525542 | None:intergenic | 50.0% | |
| CTTCGAGTGGGTAGTAGTGA+AGG | - | chr8_2:3526071-3526090 | Msa1228040:CDS | 50.0% | |
| AAGGAGAGTTTGTGAGAGGG+AGG | - | chr8_2:3526090-3526109 | Msa1228040:CDS | 50.0% | |
| AGAGGGAGGAAGAGATGATG+TGG | - | chr8_2:3526104-3526123 | Msa1228040:CDS | 50.0% | |
| GGAGGAAGAGATGATGTGGA+AGG | - | chr8_2:3526108-3526127 | Msa1228040:CDS | 50.0% | |
| AGATGATGTGGAAGGGGTTC+TGG | - | chr8_2:3526116-3526135 | Msa1228040:CDS | 50.0% | |
| GCATCAATCATGTTTGGGCG+CGG | - | chr8_2:3526328-3526347 | Msa1228040:intron | 50.0% | |
| GAACCATCCAGATAAGGGTG+GGG | - | chr8_2:3526456-3526475 | Msa1228040:CDS | 50.0% | |
| !! | TCCTGAGAAGGTTAGCCTCA+TGG | - | chr8_2:3526480-3526499 | Msa1228040:CDS | 50.0% |
| ACCATGAGGCTAACCTTCTC+AGG | + | chr8_2:3526484-3526503 | None:intergenic | 50.0% | |
| TGGACAATTGGCAGCCATAG+TGG | - | chr8_2:3526686-3526705 | Msa1228040:CDS | 50.0% | |
| GCAACTGCTGTGTTGTGTAC+TGG | - | chr8_2:3526723-3526742 | Msa1228040:intron | 50.0% | |
| CGCTCAGCACTTCATATGCT+TGG | + | chr8_2:3527281-3527300 | None:intergenic | 50.0% | |
| GCCCTTAAAGAAGGAATGGG+GGG | - | chr8_2:3527342-3527361 | Msa1228040:intron | 50.0% | |
| CTCCCCCCATTCCTTCTTTA+AGG | + | chr8_2:3527347-3527366 | None:intergenic | 50.0% | |
| CTTAAAGAAGGAATGGGGGG+AGG | - | chr8_2:3527345-3527364 | Msa1228040:intron | 50.0% | |
| TTCTGTCTTCTTGCGCGTGA+AGG | + | chr8_2:3527546-3527565 | None:intergenic | 50.0% | |
| GCCGTTATACACATCCTCCA+AGG | + | chr8_2:3527604-3527623 | None:intergenic | 50.0% | |
| TGGCATGTGGAATTGTGGGT+TGG | + | chr8_2:3527745-3527764 | None:intergenic | 50.0% | |
| ACGGACCACACATTGTAACC+GGG | - | chr8_2:3528036-3528055 | Msa1228040:CDS | 50.0% | |
| TTAGCCCCGGTTACAATGTG+TGG | + | chr8_2:3528044-3528063 | None:intergenic | 50.0% | |
| ! | GGGCATGCGATTTTCTTCTC+CGG | - | chr8_2:3528399-3528418 | Msa1228040:intron | 50.0% |
| GCTAGTTAGTTGCTCACCGT+AGG | - | chr8_2:3528465-3528484 | Msa1228040:intron | 50.0% | |
| !!! | GGAACTGCTGGAAGGTGTTT+TGG | - | chr8_2:3528673-3528692 | Msa1228040:intron | 50.0% |
| !!! | TGGAAGGTGTTTTGGATGCC+AGG | - | chr8_2:3528681-3528700 | Msa1228040:intron | 50.0% |
| !!! | GGAAGGTGTTTTGGATGCCA+GGG | - | chr8_2:3528682-3528701 | Msa1228040:intron | 50.0% |
| TGTCCTGACTGCAAAGGAAC+AGG | - | chr8_2:3528769-3528788 | Msa1228040:intron | 50.0% | |
| ! | CTGGAGGTGCATGTGGAAAA+GGG | - | chr8_2:3528942-3528961 | Msa1228040:CDS | 50.0% |
| ! | TGGAGGTGCATGTGGAAAAG+GGG | - | chr8_2:3528943-3528962 | Msa1228040:CDS | 50.0% |
| AGCTTAACTGAGGCTCTCTG+TGG | - | chr8_2:3529270-3529289 | Msa1228040:intron | 50.0% | |
| GATGAGGGAATGCCACAACA+TGG | - | chr8_2:3529474-3529493 | Msa1228040:intron | 50.0% | |
| AGGGAATGCCACAACATGGT+AGG | - | chr8_2:3529478-3529497 | Msa1228040:intron | 50.0% | |
| ATGAACGGCCTACCATGTTG+TGG | + | chr8_2:3529489-3529508 | None:intergenic | 50.0% | |
| ACATGGTAGGCCGTTCATGA+AGG | - | chr8_2:3529491-3529510 | Msa1228040:intron | 50.0% | |
| CATGGTAGGCCGTTCATGAA+GGG | - | chr8_2:3529492-3529511 | Msa1228040:intron | 50.0% | |
| GGGAAAGAAAACCCGAATCC+GGG | + | chr8_2:3529548-3529567 | None:intergenic | 50.0% | |
| GGGGAAAGAAAACCCGAATC+CGG | + | chr8_2:3529549-3529568 | None:intergenic | 50.0% | |
| CAAGAACTTGTCCCAAACGG+AGG | - | chr8_2:3529614-3529633 | Msa1228040:intron | 50.0% | |
| TGGTGAAGCGTGCTTCGAGT+GGG | - | chr8_2:3526059-3526078 | Msa1228040:CDS | 55.0% | |
| ! | TGGAAGGGGTTCTGGTGAGT+GGG | - | chr8_2:3526124-3526143 | Msa1228040:CDS | 55.0% |
| GATCCCCACCCTTATCTGGA+TGG | + | chr8_2:3526462-3526481 | None:intergenic | 55.0% | |
| TCAGGATCCCCACCCTTATC+TGG | + | chr8_2:3526466-3526485 | None:intergenic | 55.0% | |
| TAAGGGTGGGGATCCTGAGA+AGG | - | chr8_2:3526468-3526487 | Msa1228040:CDS | 55.0% | |
| ATTGGCAGCCATAGTGGCTG+CGG | - | chr8_2:3526692-3526711 | Msa1228040:CDS | 55.0% | |
| ATCCCTCAAGTAGCCAGTGG+CGG | + | chr8_2:3527042-3527061 | None:intergenic | 55.0% | |
| CGCGCAAGAAGACAGAAGCA+AGG | - | chr8_2:3527549-3527568 | Msa1228040:intron | 55.0% | |
| CGGACCACACATTGTAACCG+GGG | - | chr8_2:3528037-3528056 | Msa1228040:CDS | 55.0% | |
| !! | TGTTTTGGATGCCAGGGCAC+AGG | - | chr8_2:3528688-3528707 | Msa1228040:intron | 55.0% |
| GCCCAGTCCAATTTGCCTTC+TGG | + | chr8_2:3528725-3528744 | None:intergenic | 55.0% | |
| CACGTCTGTCCTGACTGCAA+AGG | - | chr8_2:3528763-3528782 | Msa1228040:intron | 55.0% | |
| ! | GCTGGAGGTGCATGTGGAAA+AGG | - | chr8_2:3528941-3528960 | Msa1228040:CDS | 55.0% |
| TGTGGAAAAGGGGATGCAGC+AGG | - | chr8_2:3528953-3528972 | Msa1228040:CDS | 55.0% | |
| GTGGAAAAGGGGATGCAGCA+GGG | - | chr8_2:3528954-3528973 | Msa1228040:CDS | 55.0% | |
| AGGGACATCCGAAGTTTCGG+AGG | - | chr8_2:3529214-3529233 | Msa1228040:intron | 55.0% | |
| GGGACATCCGAAGTTTCGGA+GGG | - | chr8_2:3529215-3529234 | Msa1228040:intron | 55.0% | |
| TCACGCTCCCTCCGAAACTT+CGG | + | chr8_2:3529225-3529244 | None:intergenic | 55.0% | |
| ! | ACCTGGCTTGATGACTTCGC+CGG | + | chr8_2:3529352-3529371 | None:intergenic | 55.0% |
| TCTTTCCCCAAGCCAAAGCC+TGG | - | chr8_2:3529560-3529579 | Msa1228040:intron | 55.0% | |
| ATGATGAGCACTCGCAGCCT+CGG | - | chr8_2:3529742-3529761 | Msa1228040:intron | 55.0% | |
| GTGGTGAAGCGTGCTTCGAG+TGG | - | chr8_2:3526058-3526077 | Msa1228040:CDS | 60.0% | |
| ! | GTGGAAGGGGTTCTGGTGAG+TGG | - | chr8_2:3526123-3526142 | Msa1228040:CDS | 60.0% |
| ! | AAGGGGTTCTGGTGAGTGGG+TGG | - | chr8_2:3526127-3526146 | Msa1228040:CDS | 60.0% |
| TGTTTGGGCGCGGACCAACA+AGG | - | chr8_2:3526338-3526357 | Msa1228040:intron | 60.0% | |
| TCGGAAGGCCGCACAAGAGA+AGG | + | chr8_2:3526960-3526979 | None:intergenic | 60.0% | |
| AATGCTCTGCTGTCCGCCAC+TGG | - | chr8_2:3527026-3527045 | Msa1228040:intron | 60.0% | |
| ! | TGTCCGCCACTGGCTACTTG+AGG | - | chr8_2:3527036-3527055 | Msa1228040:intron | 60.0% |
| ! | GTCCGCCACTGGCTACTTGA+GGG | - | chr8_2:3527037-3527056 | Msa1228040:intron | 60.0% |
| !! | TGGTGCAGGCTTTGGTGGTG+AGG | - | chr8_2:3527416-3527435 | Msa1228040:intron | 60.0% |
| !! | GAAGGTGCTGGAGGTGCATG+TGG | - | chr8_2:3528935-3528954 | Msa1228040:CDS | 60.0% |
| ! | CTGGCTTGATGACTTCGCCG+GGG | + | chr8_2:3529350-3529369 | None:intergenic | 60.0% |
| ! | CCTGGCTTGATGACTTCGCC+GGG | + | chr8_2:3529351-3529370 | None:intergenic | 60.0% |
| TGATGAGCACTCGCAGCCTC+GGG | - | chr8_2:3529743-3529762 | Msa1228040:intron | 60.0% | |
| TGTTGAGCGCATTGCACCCG+AGG | + | chr8_2:3529762-3529781 | None:intergenic | 60.0% | |
| AGCCATAGTGGCTGCGGCTG+TGG | - | chr8_2:3526698-3526717 | Msa1228040:CDS | 65.0% | |
| AGCCACAGCCGCAGCCACTA+TGG | + | chr8_2:3526703-3526722 | None:intergenic | 65.0% | |
| CCCGGCGAAGTCATCAAGCC+AGG | - | chr8_2:3529348-3529367 | Msa1228040:intron | 65.0% | |
| ! | GAAGGAATGGGGGGAGGCGC+AGG | - | chr8_2:3527351-3527370 | Msa1228040:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 3525285 | 3530096 | 3525285 | ID=Msa1228040;Name=Msa1228040 |
| chr8_2 | mRNA | 3525285 | 3530096 | 3525285 | ID=Msa1228040-mRNA-1;Parent=Msa1228040;Name=Msa1228040-mRNA-1;_AED=0.06;_eAED=0.06;_QI=278|1|1|1|0.85|0.75|8|311|423 |
| chr8_2 | exon | 3525285 | 3525927 | 3525285 | ID=Msa1228040-mRNA-1:exon:1122;Parent=Msa1228040-mRNA-1 |
| chr8_2 | exon | 3526012 | 3526210 | 3526012 | ID=Msa1228040-mRNA-1:exon:1121;Parent=Msa1228040-mRNA-1 |
| chr8_2 | exon | 3526368 | 3526510 | 3526368 | ID=Msa1228040-mRNA-1:exon:1120;Parent=Msa1228040-mRNA-1 |
| chr8_2 | exon | 3526591 | 3526724 | 3526591 | ID=Msa1228040-mRNA-1:exon:1119;Parent=Msa1228040-mRNA-1 |
| chr8_2 | exon | 3527705 | 3527846 | 3527705 | ID=Msa1228040-mRNA-1:exon:1118;Parent=Msa1228040-mRNA-1 |
| chr8_2 | exon | 3527949 | 3528117 | 3527949 | ID=Msa1228040-mRNA-1:exon:1117;Parent=Msa1228040-mRNA-1 |
| chr8_2 | exon | 3528892 | 3529065 | 3528892 | ID=Msa1228040-mRNA-1:exon:1116;Parent=Msa1228040-mRNA-1 |
| chr8_2 | exon | 3529840 | 3530096 | 3529840 | ID=Msa1228040-mRNA-1:exon:1115;Parent=Msa1228040-mRNA-1 |
| chr8_2 | five_prime_UTR | 3529840 | 3530096 | 3529840 | ID=Msa1228040-mRNA-1:five_prime_utr;Parent=Msa1228040-mRNA-1 |
| chr8_2 | five_prime_UTR | 3529045 | 3529065 | 3529045 | ID=Msa1228040-mRNA-1:five_prime_utr;Parent=Msa1228040-mRNA-1 |
| chr8_2 | CDS | 3528892 | 3529044 | 3528892 | ID=Msa1228040-mRNA-1:cds;Parent=Msa1228040-mRNA-1 |
| chr8_2 | CDS | 3527949 | 3528117 | 3527949 | ID=Msa1228040-mRNA-1:cds;Parent=Msa1228040-mRNA-1 |
| chr8_2 | CDS | 3527705 | 3527846 | 3527705 | ID=Msa1228040-mRNA-1:cds;Parent=Msa1228040-mRNA-1 |
| chr8_2 | CDS | 3526591 | 3526724 | 3526591 | ID=Msa1228040-mRNA-1:cds;Parent=Msa1228040-mRNA-1 |
| chr8_2 | CDS | 3526368 | 3526510 | 3526368 | ID=Msa1228040-mRNA-1:cds;Parent=Msa1228040-mRNA-1 |
| chr8_2 | CDS | 3526012 | 3526210 | 3526012 | ID=Msa1228040-mRNA-1:cds;Parent=Msa1228040-mRNA-1 |
| chr8_2 | CDS | 3525596 | 3525927 | 3525596 | ID=Msa1228040-mRNA-1:cds;Parent=Msa1228040-mRNA-1 |
| chr8_2 | three_prime_UTR | 3525285 | 3525595 | 3525285 | ID=Msa1228040-mRNA-1:three_prime_utr;Parent=Msa1228040-mRNA-1 |
| Gene Sequence |
| Protein sequence |
