AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0272840

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0272840 MtrunA17_Chr2g0282651 93.171 205 9 1 1 205 52 251 5.22e-128 360
Msa0272840 MtrunA17_Chr2g0316931 48.925 186 79 5 20 200 27 201 5.18e-43 143
Msa0272840 MtrunA17_Chr5g0438831 77.612 67 15 0 16 82 38 104 7.85e-31 114
Msa0272840 MtrunA17_Chr3g0099871 82.258 62 11 0 20 81 23 84 1.06e-30 112
Msa0272840 MtrunA17_Chr2g0282621 81.967 61 11 0 20 80 11 71 1.92e-30 110
Msa0272840 MtrunA17_Chr5g0438801 71.429 70 20 0 13 82 40 109 9.91e-30 111
Msa0272840 MtrunA17_Chr7g0221471 56.790 81 35 0 20 100 47 127 1.98e-27 102
Msa0272840 MtrunA17_Chr4g0044881 67.647 68 22 0 20 87 110 177 5.60e-27 103
Msa0272840 MtrunA17_Chr4g0044871 70.312 64 19 0 24 87 96 159 6.12e-27 102
Msa0272840 MtrunA17_Chr7g0221501 72.131 61 17 0 20 80 47 107 7.71e-27 100
Msa0272840 MtrunA17_Chr4g0044901 70.312 64 19 0 24 87 96 159 1.30e-26 101
Msa0272840 MtrunA17_Chr4g0044911 68.750 64 20 0 24 87 96 159 1.46e-26 101
Msa0272840 MtrunA17_Chr8g0383591 63.636 77 24 2 12 88 134 206 4.88e-25 99.4
Msa0272840 MtrunA17_Chr1g0195151 65.672 67 23 0 24 90 77 143 5.75e-25 99.0
Msa0272840 MtrunA17_Chr2g0283181 56.471 85 35 2 21 103 146 230 9.37e-25 98.2
Msa0272840 MtrunA17_Chr5g0412641 75.000 60 15 0 24 83 46 105 1.11e-24 99.4
Msa0272840 MtrunA17_Chr1g0170531 52.688 93 43 1 14 105 79 171 1.12e-24 96.7
Msa0272840 MtrunA17_Chr8g0367911 74.576 59 15 0 24 82 44 102 1.26e-24 97.8
Msa0272840 MtrunA17_Chr2g0334031 68.852 61 19 0 20 80 113 173 1.88e-24 98.6
Msa0272840 MtrunA17_Chr4g0055801 63.889 72 25 1 13 83 143 214 2.15e-24 97.4
Msa0272840 MtrunA17_Chr4g0055781 56.180 89 35 2 11 98 89 174 2.52e-24 96.3
Msa0272840 MtrunA17_Chr8g0344961 68.852 61 19 0 20 80 120 180 3.32e-24 98.2
Msa0272840 MtrunA17_Chr7g0252381 44.030 134 65 3 22 155 40 163 9.30e-24 95.5
Msa0272840 MtrunA17_Chr2g0295421 71.930 57 16 0 24 80 96 152 1.15e-23 94.7
Msa0272840 MtrunA17_Chr3g0126321 57.143 84 30 2 15 98 108 185 1.50e-23 96.3
Msa0272840 MtrunA17_Chr2g0283171 64.062 64 22 1 18 80 57 120 2.06e-23 91.7
Msa0272840 MtrunA17_Chr1g0186731 62.500 72 26 1 10 80 7 78 2.17e-23 91.3
Msa0272840 MtrunA17_Chr4g0040411 53.465 101 21 2 14 112 18 94 2.59e-23 92.4
Msa0272840 MtrunA17_Chr4g0046161 64.062 64 22 1 18 80 51 114 3.96e-23 89.7
Msa0272840 MtrunA17_Chr2g0286161 69.492 59 18 0 24 82 50 108 5.24e-23 93.6
Msa0272840 MtrunA17_Chr4g0002631 62.295 61 23 0 21 81 5 65 5.61e-23 91.3
Msa0272840 MtrunA17_Chr4g0055761 63.636 66 23 1 19 83 140 205 1.81e-22 91.7
Msa0272840 MtrunA17_Chr5g0396911 63.077 65 24 0 18 82 106 170 2.25e-22 92.0
Msa0272840 MtrunA17_Chr1g0184081 67.188 64 20 1 18 80 15 78 2.42e-22 88.6
Msa0272840 MtrunA17_Chr8g0375031 65.517 58 20 0 24 81 125 182 3.59e-22 90.1
Msa0272840 MtrunA17_Chr1g0158971 63.768 69 23 1 21 87 112 180 4.34e-22 92.0
Msa0272840 MtrunA17_Chr4g0066931 61.194 67 25 1 24 90 53 118 6.15e-22 91.7
Msa0272840 MtrunA17_Chr2g0297331 62.687 67 24 1 15 80 5 71 7.44e-22 86.7
Msa0272840 MtrunA17_Chr8g0335321 50.000 98 33 3 2 83 59 156 8.21e-22 88.6
Msa0272840 MtrunA17_Chr1g0196871 68.333 60 18 1 23 81 15 74 8.66e-22 85.5
Msa0272840 MtrunA17_Chr2g0333011 61.194 67 26 0 19 85 2 68 9.54e-22 87.8
Msa0272840 MtrunA17_Chr8g0335331 62.687 67 24 1 20 85 121 187 1.12e-21 88.2
Msa0272840 MtrunA17_Chr8g0335311 56.757 74 24 2 20 85 85 158 2.56e-21 87.0
Msa0272840 MtrunA17_Chr4g0003421 62.687 67 25 0 19 85 35 101 3.30e-21 87.8
Msa0272840 MtrunA17_Chr3g0137174 59.016 61 25 0 21 81 5 65 4.12e-21 86.3
Msa0272840 MtrunA17_Chr4g0063751 63.492 63 23 0 19 81 2 64 6.64e-21 86.3
Msa0272840 MtrunA17_Chr4g0017851 62.295 61 23 0 24 84 118 178 1.86e-20 87.0
Msa0272840 MtrunA17_Chr8g0387801 55.696 79 34 1 24 101 107 185 1.94e-20 87.0
Msa0272840 MtrunA17_Chr7g0250711 65.574 61 20 1 24 83 60 120 2.18e-20 84.7
Msa0272840 MtrunA17_Chr7g0250731 64.516 62 21 1 23 83 60 121 2.67e-20 84.7
Msa0272840 MtrunA17_Chr7g0275841 43.820 89 43 1 15 103 19 100 2.95e-20 83.6
Msa0272840 MtrunA17_Chr7g0250721 65.574 61 20 1 24 83 61 121 4.84e-20 84.0
Msa0272840 MtrunA17_Chr5g0432821 55.882 68 30 0 20 87 120 187 5.99e-20 85.1
Msa0272840 MtrunA17_Chr4g0026881 62.121 66 21 2 19 80 89 154 6.03e-20 84.3
Msa0272840 MtrunA17_Chr7g0261151 64.516 62 21 1 20 80 16 77 6.45e-20 82.0
Msa0272840 MtrunA17_Chr3g0134161 48.052 77 32 1 12 80 25 101 7.33e-20 82.8
Msa0272840 MtrunA17_Chr7g0253424 54.878 82 31 2 10 91 28 103 7.41e-20 84.7
Msa0272840 MtrunA17_Chr7g0257911 53.425 73 30 1 24 96 31 99 9.13e-20 84.7
Msa0272840 MtrunA17_Chr1g0150671 43.269 104 55 2 15 115 37 139 9.35e-20 84.7
Msa0272840 MtrunA17_Chr7g0261101 64.516 62 21 1 20 80 16 77 9.53e-20 81.6
Msa0272840 MtrunA17_Chr4g0062551 58.824 68 26 1 13 80 44 109 1.03e-19 81.3
Msa0272840 MtrunA17_Chr1g0200931 60.606 66 25 1 18 82 17 82 1.37e-19 81.3
Msa0272840 MtrunA17_Chr3g0131601 62.857 70 26 0 15 84 67 136 1.85e-19 83.6
Msa0272840 MtrunA17_Chr1g0184011 56.000 75 30 2 14 87 74 146 2.43e-19 82.4
Msa0272840 MtrunA17_Chr5g0437671 61.667 60 23 0 21 80 82 141 3.04e-19 84.7
Msa0272840 MtrunA17_Chr4g0062161 61.667 60 23 0 21 80 50 109 3.17e-19 81.6
Msa0272840 MtrunA17_Chr1g0186671 63.077 65 20 2 17 80 15 76 5.00e-19 79.7
Msa0272840 MtrunA17_Chr8g0346741 43.333 90 47 1 14 103 29 114 5.03e-19 80.5
Msa0272840 MtrunA17_Chr6g0461271 54.545 77 32 1 15 91 24 97 5.81e-19 83.2
Msa0272840 MtrunA17_Chr3g0115631 63.158 57 21 0 24 80 150 206 6.47e-19 83.2
Msa0272840 MtrunA17_Chr8g0382491 61.404 57 22 0 24 80 113 169 6.78e-19 82.4
Msa0272840 MtrunA17_Chr7g0261181 53.846 91 40 2 21 109 10 100 7.28e-19 79.0
Msa0272840 MtrunA17_Chr6g0453661 66.667 57 19 0 23 79 37 93 9.49e-19 83.2
Msa0272840 MtrunA17_Chr5g0438841 56.061 66 29 0 17 82 9 74 9.78e-19 79.7
Msa0272840 MtrunA17_Chr8g0350701 60.000 60 24 0 24 83 27 86 1.08e-18 82.0
Msa0272840 MtrunA17_Chr5g0425561 63.158 57 21 0 24 80 173 229 1.34e-18 82.8
Msa0272840 MtrunA17_Chr1g0196781 61.404 57 22 0 24 80 152 208 1.40e-18 82.0
Msa0272840 MtrunA17_Chr7g0217991 66.667 57 19 0 23 79 41 97 1.45e-18 83.2
Msa0272840 MtrunA17_Chr5g0399441 53.731 67 31 0 14 80 18 84 1.62e-18 79.3
Msa0272840 MtrunA17_Chr1g0150661 49.333 75 35 1 24 95 35 109 1.99e-18 80.1
Msa0272840 MtrunA17_Chr4g0026931 58.209 67 24 2 18 80 122 188 2.09e-18 80.9
Msa0272840 MtrunA17_Chr1g0184031 54.667 75 31 2 14 87 74 146 2.23e-18 80.1
Msa0272840 MtrunA17_Chr1g0150691 56.140 57 25 0 24 80 22 78 2.51e-18 79.7
Msa0272840 MtrunA17_Chr8g0334801 55.556 63 28 0 24 86 52 114 2.63e-18 79.3
Msa0272840 MtrunA17_Chr3g0129421 60.465 86 30 2 12 97 159 240 2.80e-18 81.6
Msa0272840 MtrunA17_Chr5g0401871 50.000 72 31 1 9 80 15 81 3.10e-18 78.6
Msa0272840 MtrunA17_Chr7g0232261 51.389 72 35 0 15 86 52 123 3.18e-18 79.7
Msa0272840 MtrunA17_Chr1g0150631 47.436 78 37 1 7 80 17 94 4.54e-18 79.3
Msa0272840 MtrunA17_Chr6g0486701 59.649 57 23 0 24 80 44 100 4.67e-18 79.0
Msa0272840 MtrunA17_Chr1g0184061 53.947 76 32 2 13 87 66 139 6.02e-18 78.6
Msa0272840 MtrunA17_Chr1g0184071 57.353 68 28 1 13 79 58 125 6.59e-18 77.4
Msa0272840 MtrunA17_Chr4g0042761 62.500 56 21 0 24 79 48 103 7.09e-18 80.1
Msa0272840 MtrunA17_Chr1g0153151 56.140 57 25 0 24 80 44 100 7.64e-18 77.4
Msa0272840 MtrunA17_Chr2g0301191 57.895 57 24 0 24 80 19 75 8.05e-18 78.2
Msa0272840 MtrunA17_Chr1g0186681 62.712 59 20 1 24 80 19 77 8.24e-18 76.3
Msa0272840 MtrunA17_Chr2g0323171 56.897 58 25 0 23 80 64 121 8.74e-18 77.4
Msa0272840 MtrunA17_Chr3g0140161 59.649 57 23 0 24 80 43 99 1.30e-17 77.0
Msa0272840 MtrunA17_Chr8g0340311 57.377 61 26 0 20 80 43 103 2.05e-17 77.0
Msa0272840 MtrunA17_Chr1g0189941 44.737 76 32 1 22 97 22 87 2.28e-17 75.9
Msa0272840 MtrunA17_Chr1g0183981 64.912 57 19 1 24 79 75 131 2.43e-17 77.0
Msa0272840 MtrunA17_Chr4g0023411 47.436 78 37 1 23 100 64 137 2.96e-17 76.3
Msa0272840 MtrunA17_Chr1g0170471 67.308 52 16 1 31 81 90 141 3.34e-17 75.9
Msa0272840 MtrunA17_Chr2g0324131 59.649 57 23 0 24 80 218 274 3.48e-17 79.0
Msa0272840 MtrunA17_Chr2g0301171 56.140 57 25 0 24 80 19 75 3.54e-17 76.3
Msa0272840 MtrunA17_Chr6g0461941 65.278 72 25 0 15 86 11 82 6.13e-17 75.9
Msa0272840 MtrunA17_Chr1g0183961 65.574 61 20 1 21 80 24 84 6.57e-17 74.3
Msa0272840 MtrunA17_Chr8g0378811 58.621 58 24 0 22 79 53 110 7.58e-17 76.6
Msa0272840 MtrunA17_Chr4g0055951 57.895 57 24 0 24 80 74 130 7.72e-17 76.3
Msa0272840 MtrunA17_Chr2g0331231 56.140 57 25 0 24 80 41 97 9.03e-17 75.1
Msa0272840 MtrunA17_Chr3g0136551 39.326 89 54 0 15 103 56 144 2.29e-16 75.5
Msa0272840 MtrunA17_Chr8g0390091 57.895 57 24 0 24 80 37 93 2.58e-16 74.7
Msa0272840 MtrunA17_Chr5g0437371 57.143 56 24 0 24 79 66 121 3.22e-16 75.5
Msa0272840 MtrunA17_Chr2g0301181 54.386 57 26 0 24 80 19 75 4.70e-16 73.9
Msa0272840 MtrunA17_Chr1g0149331 62.500 64 24 0 19 82 2 65 1.32e-15 72.0
Msa0272840 MtrunA17_Chr5g0396171 47.619 63 33 0 26 88 26 88 2.17e-15 68.9
Msa0272840 MtrunA17_Chr5g0396191 61.404 57 22 0 24 80 11 67 4.27e-15 70.5
Msa0272840 MtrunA17_Chr7g0243431 51.515 66 25 1 21 79 75 140 5.08e-15 72.8
Msa0272840 MtrunA17_Chr7g0225131 54.386 57 23 1 24 80 29 82 6.14e-15 67.4
Msa0272840 MtrunA17_Chr8g0345531 59.184 49 20 0 22 70 114 162 6.39e-15 72.0
Msa0272840 MtrunA17_Chr5g0438851 36.957 184 69 6 20 200 14 153 8.15e-15 69.3
Msa0272840 MtrunA17_Chr3g0083501 58.000 50 21 0 31 80 2 51 9.11e-15 66.6
Msa0272840 MtrunA17_Chr6g0473941 44.000 75 42 0 24 98 33 107 1.05e-14 69.7
Msa0272840 MtrunA17_Chr7g0265851 50.769 65 27 1 24 83 24 88 1.29e-14 69.3
Msa0272840 MtrunA17_Chr1g0205961 59.184 49 20 0 22 70 113 161 1.31e-14 71.2
Msa0272840 MtrunA17_Chr8g0345551 61.224 49 19 0 22 70 115 163 1.31e-14 71.2
Msa0272840 MtrunA17_Chr3g0136541 44.286 70 39 0 26 95 42 111 2.30e-14 69.3
Msa0272840 MtrunA17_Chr7g0261201 47.573 103 38 3 20 121 94 181 2.33e-14 69.3
Msa0272840 MtrunA17_Chr1g0186741 61.538 65 24 1 20 83 69 133 3.23e-14 68.6
Msa0272840 MtrunA17_Chr1g0203861 57.143 56 24 0 24 79 44 99 3.50e-14 68.2
Msa0272840 MtrunA17_Chr6g0473881 55.357 56 25 0 24 79 110 165 4.63e-14 69.3
Msa0272840 MtrunA17_Chr4g0002771 66.176 68 23 0 15 82 68 135 4.66e-14 68.2
Msa0272840 MtrunA17_Chr6g0473931 57.143 56 24 0 24 79 33 88 5.95e-14 67.4
Msa0272840 MtrunA17_Chr3g0108241 57.353 68 28 1 14 80 105 172 7.52e-14 68.2
Msa0272840 MtrunA17_Chr6g0473781 55.357 56 25 0 24 79 57 112 1.00e-13 67.4
Msa0272840 MtrunA17_Chr1g0209891 56.000 50 22 0 22 71 52 101 1.21e-13 68.2
Msa0272840 MtrunA17_Chr5g0396181 44.304 79 44 0 24 102 21 99 1.23e-13 66.6
Msa0272840 MtrunA17_Chr6g0473961 55.357 56 25 0 24 79 54 109 1.49e-13 66.6
Msa0272840 MtrunA17_Chr6g0473741 53.571 56 26 0 24 79 66 121 1.66e-13 67.0
Msa0272840 MtrunA17_Chr6g0473981 55.357 56 25 0 24 79 54 109 2.13e-13 67.0
Msa0272840 MtrunA17_Chr6g0473971 53.571 56 26 0 24 79 54 109 3.76e-13 66.2
Msa0272840 MtrunA17_Chr3g0137831 65.517 58 20 0 24 81 8 65 4.16e-13 65.5
Msa0272840 MtrunA17_Chr6g0473861 53.571 56 26 0 24 79 63 118 4.65e-13 66.2
Msa0272840 MtrunA17_Chr1g0183931 63.793 58 20 1 24 80 101 158 4.69e-13 65.9
Msa0272840 MtrunA17_Chr1g0167781 60.000 65 23 2 24 87 82 144 6.37e-13 65.1
Msa0272840 MtrunA17_Chr1g0155751 56.140 57 25 0 24 80 39 95 1.14e-12 65.1
Msa0272840 MtrunA17_Chr5g0396301 49.153 59 28 1 24 80 18 76 1.14e-12 63.2
Msa0272840 MtrunA17_Chr6g0464581 71.930 57 13 1 31 87 187 240 1.16e-12 65.9
Msa0272840 MtrunA17_Chr6g0474001 53.571 56 26 0 24 79 54 109 1.31e-12 65.1
Msa0272840 MtrunA17_Chr1g0146191 57.576 66 28 0 15 80 38 103 1.35e-12 64.7
Msa0272840 MtrunA17_Chr5g0423811 56.250 48 21 0 24 71 88 135 1.36e-12 65.1
Msa0272840 MtrunA17_Chr6g0486711 57.377 61 26 0 20 80 45 105 2.95e-12 63.5
Msa0272840 MtrunA17_Chr6g0473771 48.214 56 29 0 24 79 43 98 3.07e-12 61.2
Msa0272840 MtrunA17_Chr1g0201671 54.878 82 34 1 31 112 146 224 5.62e-12 63.5
Msa0272840 MtrunA17_Chr7g0261171 63.158 57 20 1 24 79 85 141 1.05e-11 62.0
Msa0272840 MtrunA17_Chr5g0422501 46.250 80 39 2 2 79 83 160 1.40e-11 62.8
Msa0272840 MtrunA17_Chr6g0473791 53.061 49 23 0 24 72 57 105 3.80e-11 58.9
Msa0272840 MtrunA17_Chr3g0142081 56.140 57 25 0 24 80 39 95 7.31e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0272840 AT5G44210.1 74.074 81 21 0 9 89 18 98 5.66e-38 130
Msa0272840 AT3G15210.1 67.368 95 24 2 14 101 15 109 2.11e-37 129
Msa0272840 AT1G50640.1 86.364 66 9 0 16 81 20 85 4.36e-34 121
Msa0272840 AT3G20310.1 72.368 76 21 0 6 81 9 84 6.69e-32 116
Msa0272840 AT1G28360.1 79.688 64 13 0 20 83 8 71 8.57e-31 112
Msa0272840 AT1G28370.2 71.250 80 19 2 1 80 39 114 1.96e-30 111
Msa0272840 AT1G28370.1 71.250 80 19 2 1 80 1 76 3.42e-30 109
Msa0272840 AT1G03800.1 72.857 70 18 1 13 81 41 110 3.94e-29 108
Msa0272840 AT1G53170.1 44.737 190 71 6 18 202 25 185 2.87e-28 105
Msa0272840 AT2G33710.1 51.020 98 44 2 7 104 53 146 7.87e-27 102
Msa0272840 AT2G33710.2 51.020 98 44 2 7 104 53 146 8.27e-27 102
Msa0272840 AT5G13330.1 57.500 80 29 1 23 102 38 112 1.90e-26 101
Msa0272840 AT1G12980.1 64.935 77 26 1 7 83 41 116 2.50e-26 103
Msa0272840 AT5G61890.1 60.256 78 28 1 15 92 81 155 9.55e-26 100
Msa0272840 AT4G11140.1 68.657 67 19 1 23 87 86 152 4.44e-25 99.4
Msa0272840 AT1G24590.1 71.429 63 18 0 24 86 58 120 8.32e-25 99.0
Msa0272840 AT3G16770.1 75.439 57 14 0 24 80 79 135 1.77e-24 97.1
Msa0272840 AT1G72360.1 69.492 59 18 0 22 80 23 81 3.03e-24 95.5
Msa0272840 AT5G51190.1 70.968 62 17 1 21 81 69 130 3.36e-24 95.5
Msa0272840 AT5G61600.1 55.172 87 37 2 23 108 87 172 3.56e-24 95.9
Msa0272840 AT5G13910.1 74.138 58 15 0 24 81 20 77 5.31e-24 94.7
Msa0272840 AT2G47520.1 71.930 57 16 0 24 80 50 106 9.49e-24 93.2
Msa0272840 AT1G72360.3 67.213 61 20 0 20 80 70 130 9.96e-24 95.1
Msa0272840 AT1G72360.2 67.213 61 20 0 20 80 72 132 1.06e-23 95.1
Msa0272840 AT3G61630.1 66.154 65 22 0 18 82 99 163 1.93e-23 95.5
Msa0272840 AT1G28160.1 66.667 63 21 0 19 81 34 96 2.69e-23 94.0
Msa0272840 AT5G47230.1 67.692 65 20 1 20 83 152 216 2.73e-23 94.7
Msa0272840 AT4G23750.2 69.492 59 18 0 21 79 119 177 5.02e-23 94.7
Msa0272840 AT4G23750.1 69.492 59 18 0 21 79 119 177 5.02e-23 94.7
Msa0272840 AT1G12890.1 59.740 77 30 1 19 95 16 91 7.02e-23 92.0
Msa0272840 AT5G25190.1 62.295 61 23 0 21 81 5 65 1.18e-22 90.5
Msa0272840 AT5G47220.1 62.687 67 24 1 18 83 111 177 1.21e-22 92.0
Msa0272840 AT5G53290.1 62.687 67 23 1 13 79 116 180 1.64e-22 93.6
Msa0272840 AT4G27950.1 48.454 97 44 2 21 112 115 210 1.79e-22 93.2
Msa0272840 AT3G23230.1 67.742 62 19 1 20 80 16 77 3.87e-22 88.2
Msa0272840 AT5G18560.1 66.667 63 21 0 24 86 55 117 8.64e-22 91.7
Msa0272840 AT5G07580.1 56.410 78 31 2 18 94 104 179 1.44e-21 88.6
Msa0272840 AT2G44840.1 62.319 69 25 1 20 87 88 156 1.51e-21 89.0
Msa0272840 AT4G17500.1 61.194 67 25 1 18 83 142 208 2.43e-21 89.0
Msa0272840 AT1G15360.1 63.492 63 23 0 19 81 2 64 2.77e-21 87.4
Msa0272840 AT1G15360.2 63.492 63 23 0 19 81 2 64 2.77e-21 87.4
Msa0272840 AT5G43410.1 72.414 58 15 1 24 80 15 72 3.90e-21 85.1
Msa0272840 AT4G17490.1 63.492 63 22 1 23 84 136 198 9.31e-21 87.8
Msa0272840 AT5G25390.2 61.194 67 26 0 19 85 2 68 1.19e-20 85.5
Msa0272840 AT5G64750.1 67.188 64 18 1 31 94 192 252 1.29e-20 89.0
Msa0272840 AT5G65130.2 36.735 147 61 6 24 161 113 236 1.70e-20 87.0
Msa0272840 AT5G65130.1 36.735 147 61 6 24 161 111 234 1.83e-20 87.0
Msa0272840 AT2G31230.1 44.167 120 51 4 1 104 59 178 1.84e-20 86.3
Msa0272840 AT1G71450.1 55.224 67 30 0 14 80 14 80 2.11e-20 84.7
Msa0272840 AT4G06746.1 48.750 80 37 1 5 80 13 92 6.34e-20 82.4
Msa0272840 AT5G07310.1 54.762 84 35 1 13 96 81 161 7.09e-20 85.1
Msa0272840 AT3G50260.1 51.316 76 34 1 8 80 2 77 7.43e-20 82.4
Msa0272840 AT1G22985.1 58.571 70 26 1 16 82 67 136 9.44e-20 82.4
Msa0272840 AT2G46310.1 60.656 61 24 0 22 82 97 157 1.28e-19 85.1
Msa0272840 AT2G22200.1 55.072 69 31 0 12 80 59 127 1.45e-19 84.3
Msa0272840 AT1G75490.1 59.649 57 23 0 24 80 42 98 1.50e-19 83.2
Msa0272840 AT1G71130.1 55.714 70 26 1 21 85 76 145 1.83e-19 81.6
Msa0272840 AT4G34410.1 66.176 68 23 0 24 91 136 203 2.19e-19 84.0
Msa0272840 AT4G39780.1 63.158 57 21 0 24 80 93 149 3.37e-19 83.6
Msa0272840 AT5G05410.2 44.231 104 52 2 24 121 79 182 3.51e-19 84.0
Msa0272840 AT2G35700.1 60.656 61 24 0 20 80 41 101 4.17e-19 81.6
Msa0272840 AT1G22190.1 63.158 57 21 0 24 80 83 139 4.27e-19 82.8
Msa0272840 AT5G05410.1 44.231 104 52 2 24 121 79 182 4.91e-19 84.0
Msa0272840 AT4G16750.1 50.649 77 38 0 4 80 20 96 6.06e-19 80.9
Msa0272840 AT2G20880.1 46.429 84 45 0 24 107 187 270 6.77e-19 83.6
Msa0272840 AT4G18450.1 63.636 66 22 2 18 81 104 169 9.22e-19 82.8
Msa0272840 AT1G01250.1 43.750 96 47 2 8 103 29 117 1.26e-18 80.1
Msa0272840 AT4G36900.1 56.140 57 25 0 24 80 30 86 1.47e-18 80.1
Msa0272840 AT1G36060.1 63.158 57 21 0 24 80 143 199 1.63e-18 82.0
Msa0272840 AT1G78080.1 63.158 57 21 0 24 80 152 208 1.85e-18 82.4
Msa0272840 AT1G46768.1 37.931 116 66 2 24 133 31 146 2.46e-18 78.6
Msa0272840 AT1G46768.2 37.931 116 66 2 24 133 31 146 2.46e-18 78.6
Msa0272840 AT2G23340.1 47.761 67 35 0 24 90 28 94 3.69e-18 78.6
Msa0272840 AT2G44940.1 56.061 66 29 0 15 80 91 156 3.97e-18 80.9
Msa0272840 AT4G28140.1 44.681 94 46 1 24 117 143 230 3.98e-18 80.9
Msa0272840 AT4G32800.1 57.377 61 26 0 20 80 15 75 4.85e-18 79.3
Msa0272840 AT4G13620.1 61.404 57 22 0 24 80 232 288 5.96e-18 81.3
Msa0272840 AT1G46768.3 56.140 57 25 0 24 80 31 87 7.00e-18 77.0
Msa0272840 AT5G50080.2 68.116 69 19 1 20 88 82 147 8.52e-18 79.0
Msa0272840 AT3G23240.1 61.667 60 22 1 21 79 79 138 8.56e-18 78.6
Msa0272840 AT5G50080.1 68.116 69 19 1 20 88 73 138 8.60e-18 78.6
Msa0272840 AT5G67190.1 56.140 57 25 0 24 80 21 77 8.83e-18 77.8
Msa0272840 AT1G43160.1 65.278 72 22 1 24 95 61 129 9.46e-18 77.8
Msa0272840 AT5G25390.1 58.209 67 25 1 19 85 2 65 1.16e-17 77.4
Msa0272840 AT1G21910.1 54.386 57 26 0 24 80 50 106 1.24e-17 78.6
Msa0272840 AT5G18450.1 55.932 59 26 0 24 82 34 92 1.65e-17 79.3
Msa0272840 AT5G19790.1 62.500 56 21 0 24 79 22 77 1.82e-17 78.6
Msa0272840 AT5G21960.1 57.895 57 24 0 24 80 7 63 1.95e-17 77.8
Msa0272840 AT2G25820.1 59.649 57 23 0 24 80 26 82 2.36e-17 77.8
Msa0272840 AT3G11020.1 51.948 77 35 1 24 98 78 154 3.96e-17 78.6
Msa0272840 AT5G25810.1 59.649 57 23 0 24 80 36 92 5.64e-17 76.6
Msa0272840 AT1G19210.1 47.059 68 36 0 13 80 1 68 7.06e-17 75.5
Msa0272840 AT3G57600.1 51.515 66 32 0 22 87 26 91 1.06e-16 76.6
Msa0272840 AT3G16280.1 57.895 57 24 0 24 80 61 117 1.08e-16 75.9
Msa0272840 AT5G11590.1 59.649 57 23 0 24 80 51 107 1.26e-16 75.9
Msa0272840 AT3G16280.2 57.895 57 24 0 24 80 79 135 1.40e-16 75.9
Msa0272840 AT1G68550.1 53.968 63 29 0 8 70 97 159 1.66e-16 76.6
Msa0272840 AT1G68550.2 53.968 63 29 0 8 70 97 159 1.66e-16 76.6
Msa0272840 AT3G60490.1 57.895 57 24 0 24 80 71 127 3.46e-16 75.1
Msa0272840 AT4G31060.1 48.611 72 30 1 16 80 12 83 7.80e-16 72.8
Msa0272840 AT5G67000.1 57.627 59 25 0 20 78 117 175 8.43e-16 72.4
Msa0272840 AT1G74930.1 50.000 60 30 0 21 80 18 77 1.40e-15 72.4
Msa0272840 AT4G25480.1 57.143 56 24 0 24 79 51 106 3.37e-15 71.6
Msa0272840 AT4G25470.1 39.806 103 53 2 24 126 51 144 3.44e-15 71.6
Msa0272840 AT2G40350.2 48.276 58 30 0 24 81 74 131 4.16e-15 70.1
Msa0272840 AT2G40340.2 52.632 57 27 0 24 80 14 70 4.51e-15 72.4
Msa0272840 AT2G40340.5 52.632 57 27 0 24 80 14 70 4.51e-15 72.4
Msa0272840 AT2G40340.4 52.632 57 27 0 24 80 14 70 4.51e-15 72.4
Msa0272840 AT3G23220.1 59.155 71 28 1 18 87 8 78 4.91e-15 69.3
Msa0272840 AT2G40350.1 48.276 58 30 0 24 81 67 124 5.12e-15 69.7
Msa0272840 AT4G25490.1 57.143 56 24 0 24 79 48 103 7.22e-15 70.9
Msa0272840 AT1G49120.1 63.830 47 17 0 24 70 87 133 8.77e-15 72.0
Msa0272840 AT1G04370.1 66.129 62 20 1 20 80 16 77 9.58e-15 68.6
Msa0272840 AT5G61590.1 66.667 60 19 1 23 81 106 165 1.27e-14 69.7
Msa0272840 AT1G80580.1 62.821 78 29 0 5 82 97 174 1.49e-14 70.5
Msa0272840 AT3G14230.2 72.131 61 17 0 20 80 120 180 1.55e-14 71.6
Msa0272840 AT3G14230.1 72.131 61 17 0 20 80 124 184 1.57e-14 71.6
Msa0272840 AT2G40340.6 52.632 57 27 0 24 80 79 135 1.58e-14 71.2
Msa0272840 AT3G14230.3 72.131 61 17 0 20 80 119 179 1.65e-14 71.6
Msa0272840 AT2G40340.1 52.632 57 27 0 24 80 72 128 1.75e-14 71.2
Msa0272840 AT2G40340.3 52.632 57 27 0 24 80 72 128 1.89e-14 70.9
Msa0272840 AT1G53910.3 61.333 75 27 1 20 94 119 191 4.02e-14 70.1
Msa0272840 AT1G53910.1 61.333 75 27 1 20 94 121 193 4.05e-14 70.1
Msa0272840 AT1G53910.2 61.333 75 27 1 20 94 121 193 4.05e-14 70.1
Msa0272840 AT1G06160.1 54.545 77 34 1 5 80 63 139 4.67e-14 68.9
Msa0272840 AT5G51990.1 57.143 56 24 0 24 79 54 109 5.36e-14 68.6
Msa0272840 AT5G11190.1 65.517 58 20 0 24 81 7 64 5.39e-14 67.8
Msa0272840 AT1G33760.1 41.860 86 50 0 18 103 14 99 1.05e-13 67.0
Msa0272840 AT1G71520.1 37.838 74 44 1 11 82 1 74 5.61e-13 63.9
Msa0272840 AT1G22810.1 41.935 62 36 0 21 82 11 72 5.73e-13 63.9
Msa0272840 AT2G36450.1 51.724 58 27 1 24 80 15 72 1.94e-12 63.5
Msa0272840 AT1G77200.1 59.649 57 23 0 24 80 43 99 4.15e-12 63.5
Msa0272840 AT3G25730.1 46.753 77 34 2 22 93 60 134 8.14e-12 63.5
Msa0272840 AT1G77640.1 50.000 72 32 1 20 91 39 106 3.41e-11 61.2
Msa0272840 AT3G25890.1 43.284 67 38 0 4 70 111 177 5.70e-11 61.2
Msa0272840 AT3G25890.2 43.284 67 38 0 4 70 111 177 5.70e-11 61.2

Find 60 sgRNAs with CRISPR-Local

Find 70 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCACCGTTCTTAACAACTTT+CGG 0.319171 2_3:+4398429 None:intergenic
AACATTCAACGGTGCTGCTT+TGG 0.358045 2_3:+4398160 None:intergenic
GAACAATAACGGCAGCGTTA+AGG 0.398343 2_3:-4398397 Msa0272840:CDS
ATGTGAATATAATCCTTCTA+TGG 0.417829 2_3:-4397971 Msa0272840:CDS
GCATCGGAGTGAACCGGTGC+TGG 0.425088 2_3:+4398073 None:intergenic
TCAACGGTGCTGCTTTGGCT+AGG 0.425953 2_3:+4398165 None:intergenic
TGCTGCTTTGGCTAGGGCTA+TGG 0.428805 2_3:+4398172 None:intergenic
CAGGAAAGAAAAGCCGCGTT+TGG 0.441530 2_3:-4398311 Msa0272840:CDS
TCACGTCCTAGTTACGGTTA+TGG 0.441942 2_3:-4397994 Msa0272840:CDS
AATCCACTCGCCTCCATAGA+AGG 0.442609 2_3:+4397958 None:intergenic
CGATCTTAACTACCCTCCTC+TGG 0.455708 2_3:-4397854 Msa0272840:CDS
ATCAATCACAGACGAAGAAT+CGG 0.466275 2_3:+4397906 None:intergenic
GGCGTTAACGTGAACAATAA+CGG 0.477646 2_3:-4398408 Msa0272840:CDS
CAGCGGCGGCGTCACGGTCA+CGG 0.480081 2_3:+4398133 None:intergenic
CAACGGTGCTGCTTTGGCTA+GGG 0.481982 2_3:+4398166 None:intergenic
GTGAACCGGTGCTGGAAAGC+AGG 0.484790 2_3:+4398081 None:intergenic
TAGCTCCTGCTTTCCAGCAC+CGG 0.490337 2_3:-4398086 Msa0272840:CDS
CCGCCGGCATCGGAGTGAAC+CGG 0.502479 2_3:+4398067 None:intergenic
TAGCATCAAAACAAAACGTC+TGG 0.508536 2_3:+4398040 None:intergenic
GTGAAATCACGTCCTAGTTA+CGG 0.510353 2_3:-4398000 Msa0272840:CDS
AAGAAAAGCCGCGTTTGGCT+CGG 0.526831 2_3:-4398306 Msa0272840:CDS
GCACCGGTTCACTCCGATGC+CGG 0.527225 2_3:-4398070 Msa0272840:CDS
GTCTGGTTAACCGCCGGCAT+CGG 0.531539 2_3:+4398057 None:intergenic
GCCGCGGAGATAAGAGATCC+AGG 0.533867 2_3:-4398330 Msa0272840:CDS
AGTGGATTCCACGCGACGGT+TGG 0.542163 2_3:-4397943 Msa0272840:CDS
GAGGAGTAAGAAAGAGACCA+TGG 0.544445 2_3:-4398362 Msa0272840:CDS
AGGAGTAAGAAAGAGACCAT+GGG 0.555103 2_3:-4398361 Msa0272840:CDS
AAGAATCAGCGGCGGCGTCA+CGG 0.563966 2_3:+4398127 None:intergenic
TGCTATGTTACGTGCCGGCA+TGG 0.566341 2_3:-4398022 Msa0272840:CDS
CAATAACGGCAGCGTTAAGG+AGG 0.573577 2_3:-4398394 Msa0272840:CDS
TCCGCGGCGTATCTTCCCCA+TGG 0.576811 2_3:+4398345 None:intergenic
ACGTCAATTCCGAGGTCCAA+AGG 0.583243 2_3:-4398235 Msa0272840:CDS
TCACATCCATAACCGTAACT+AGG 0.585319 2_3:+4397988 None:intergenic
CAAAAGTTCCGAGCCAAACG+CGG 0.591165 2_3:+4398298 None:intergenic
GGAGCTAAGTTGAGATCAAG+CGG 0.599934 2_3:+4398102 None:intergenic
GTCACGGCTTGAACATTCAA+CGG 0.606030 2_3:+4398149 None:intergenic
TCTGTGCACCAACCGTCGCG+TGG 0.611255 2_3:+4397935 None:intergenic
CGAAATCGAAGCTTCTTCCA+TGG 0.611887 2_3:+4397875 None:intergenic
ACCTCGGAATTGACGTGCGG+CGG 0.613585 2_3:+4398242 None:intergenic
TTTGATGCTATGTTACGTGC+CGG 0.615969 2_3:-4398027 Msa0272840:CDS
AGGACGTGATTTCACCATGC+CGG 0.622000 2_3:+4398008 None:intergenic
TCCGCCGCACGTCAATTCCG+AGG 0.630454 2_3:-4398243 Msa0272840:CDS
TGAATATAATCCTTCTATGG+AGG 0.631245 2_3:-4397968 Msa0272840:CDS
CATAGCATATCTTCCAGAGG+AGG 0.633956 2_3:+4397841 None:intergenic
CAAAACGTCTGGTTAACCGC+CGG 0.636965 2_3:+4398051 None:intergenic
TCCTGGATCTCTTATCTCCG+CGG 0.638475 2_3:+4398329 None:intergenic
AATCCTTCTATGGAGGCGAG+TGG 0.644050 2_3:-4397961 Msa0272840:CDS
GGAGTAAGAAAGAGACCATG+GGG 0.646429 2_3:-4398360 Msa0272840:CDS
GCGCCGAAAGTTGTTAAGAA+CGG 0.647779 2_3:-4398432 Msa0272840:CDS
CCGGTTCACTCCGATGCCGG+CGG 0.648575 2_3:-4398067 Msa0272840:CDS
ATAGCATATCTTCCAGAGGA+GGG 0.649329 2_3:+4397842 None:intergenic
GGCGAGTGGATTCCACGCGA+CGG 0.650414 2_3:-4397947 Msa0272840:CDS
TGGACCTCGGAATTGACGTG+CGG 0.654025 2_3:+4398239 None:intergenic
CCGAAAGTTGTTAAGAACGG+TGG 0.660430 2_3:-4398429 Msa0272840:CDS
ATCAAGCGGAGAAGAATCAG+CGG 0.679986 2_3:+4398116 None:intergenic
AATCGAAGCTTCTTCCATGG+TGG 0.684719 2_3:+4397878 None:intergenic
ATTCATAGCATATCTTCCAG+AGG 0.695703 2_3:+4397838 None:intergenic
AAGCGGAGAAGAATCAGCGG+CGG 0.714768 2_3:+4398119 None:intergenic
GTGATTGATCTGAACCACCA+TGG 0.738183 2_3:-4397892 Msa0272840:CDS
ACCATGGGGAAGATACGCCG+CGG 0.759104 2_3:-4398346 Msa0272840:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAACATTTTCTATAGGGAAA+GGG + chr2_3:4398079-4398098 None:intergenic 25.0%
!! TTAACATTTTCTATAGGGAA+AGG + chr2_3:4398080-4398099 None:intergenic 25.0%
!! GGATCTTAACATTTTCTATA+GGG + chr2_3:4398085-4398104 None:intergenic 25.0%
!! TGGATCTTAACATTTTCTAT+AGG + chr2_3:4398086-4398105 None:intergenic 25.0%
! ATGTGAATATAATCCTTCTA+TGG - chr2_3:4398304-4398323 Msa0272840:CDS 25.0%
TGAATATAATCCTTCTATGG+AGG - chr2_3:4398307-4398326 Msa0272840:CDS 30.0%
TAGCATCAAAACAAAACGTC+TGG + chr2_3:4398238-4398257 None:intergenic 35.0%
ATCAATCACAGACGAAGAAT+CGG + chr2_3:4398372-4398391 None:intergenic 35.0%
CCACCGTTCTTAACAACTTT+CGG + chr2_3:4397849-4397868 None:intergenic 40.0%
GGCGTTAACGTGAACAATAA+CGG - chr2_3:4397867-4397886 Msa0272840:CDS 40.0%
AGGAGTAAGAAAGAGACCAT+GGG - chr2_3:4397914-4397933 Msa0272840:CDS 40.0%
!!! TTGGCTCGGAACTTTTGATA+CGG - chr2_3:4397983-4398002 Msa0272840:CDS 40.0%
TTTGATGCTATGTTACGTGC+CGG - chr2_3:4398248-4398267 Msa0272840:CDS 40.0%
GTGAAATCACGTCCTAGTTA+CGG - chr2_3:4398275-4398294 Msa0272840:CDS 40.0%
TCACATCCATAACCGTAACT+AGG + chr2_3:4398290-4398309 None:intergenic 40.0%
ATAGCATATCTTCCAGAGGA+GGG + chr2_3:4398436-4398455 None:intergenic 40.0%
GCGCCGAAAGTTGTTAAGAA+CGG - chr2_3:4397843-4397862 Msa0272840:CDS 45.0%
CCGAAAGTTGTTAAGAACGG+TGG - chr2_3:4397846-4397865 Msa0272840:CDS 45.0%
GAACAATAACGGCAGCGTTA+AGG - chr2_3:4397878-4397897 Msa0272840:CDS 45.0%
!! GTTAAGGAGGCGCATTTTAG+AGG - chr2_3:4397894-4397913 Msa0272840:CDS 45.0%
GAGGAGTAAGAAAGAGACCA+TGG - chr2_3:4397913-4397932 Msa0272840:CDS 45.0%
GGAGTAAGAAAGAGACCATG+GGG - chr2_3:4397915-4397934 Msa0272840:CDS 45.0%
! TTGTTTTCGCCTTTGGACCT+CGG + chr2_3:4398052-4398071 None:intergenic 45.0%
!! GGGAAGTTTGTTTTCGCCTT+TGG + chr2_3:4398059-4398078 None:intergenic 45.0%
!! AACATTCAACGGTGCTGCTT+TGG + chr2_3:4398118-4398137 None:intergenic 45.0%
GTCACGGCTTGAACATTCAA+CGG + chr2_3:4398129-4398148 None:intergenic 45.0%
ATCAAGCGGAGAAGAATCAG+CGG + chr2_3:4398162-4398181 None:intergenic 45.0%
! GGAGCTAAGTTGAGATCAAG+CGG + chr2_3:4398176-4398195 None:intergenic 45.0%
TCACGTCCTAGTTACGGTTA+TGG - chr2_3:4398281-4398300 Msa0272840:CDS 45.0%
GTGATTGATCTGAACCACCA+TGG - chr2_3:4398383-4398402 Msa0272840:CDS 45.0%
AATCGAAGCTTCTTCCATGG+TGG + chr2_3:4398400-4398419 None:intergenic 45.0%
CGAAATCGAAGCTTCTTCCA+TGG + chr2_3:4398403-4398422 None:intergenic 45.0%
CATAGCATATCTTCCAGAGG+AGG + chr2_3:4398437-4398456 None:intergenic 45.0%
CAATAACGGCAGCGTTAAGG+AGG - chr2_3:4397881-4397900 Msa0272840:CDS 50.0%
TCCTGGATCTCTTATCTCCG+CGG + chr2_3:4397949-4397968 None:intergenic 50.0%
! CAAACGCGGCTTTTCTTTCC+TGG + chr2_3:4397966-4397985 None:intergenic 50.0%
CAGGAAAGAAAAGCCGCGTT+TGG - chr2_3:4397964-4397983 Msa0272840:CDS 50.0%
AAGAAAAGCCGCGTTTGGCT+CGG - chr2_3:4397969-4397988 Msa0272840:CDS 50.0%
CAAAAGTTCCGAGCCAAACG+CGG + chr2_3:4397980-4397999 None:intergenic 50.0%
! GCTCGGAACTTTTGATACGG+CGG - chr2_3:4397986-4398005 Msa0272840:CDS 50.0%
ACGTCAATTCCGAGGTCCAA+AGG - chr2_3:4398040-4398059 Msa0272840:CDS 50.0%
CAAAACGTCTGGTTAACCGC+CGG + chr2_3:4398227-4398246 None:intergenic 50.0%
AGGACGTGATTTCACCATGC+CGG + chr2_3:4398270-4398289 None:intergenic 50.0%
AATCCTTCTATGGAGGCGAG+TGG - chr2_3:4398314-4398333 Msa0272840:CDS 50.0%
AATCCACTCGCCTCCATAGA+AGG + chr2_3:4398320-4398339 None:intergenic 50.0%
CGATCTTAACTACCCTCCTC+TGG - chr2_3:4398421-4398440 Msa0272840:CDS 50.0%
! CGGAACTTTTGATACGGCGG+AGG - chr2_3:4397989-4398008 Msa0272840:CDS 55.0%
TGGACCTCGGAATTGACGTG+CGG + chr2_3:4398039-4398058 None:intergenic 55.0%
!! TGCTGCTTTGGCTAGGGCTA+TGG + chr2_3:4398106-4398125 None:intergenic 55.0%
!! CAACGGTGCTGCTTTGGCTA+GGG + chr2_3:4398112-4398131 None:intergenic 55.0%
!! TCAACGGTGCTGCTTTGGCT+AGG + chr2_3:4398113-4398132 None:intergenic 55.0%
AAGCGGAGAAGAATCAGCGG+CGG + chr2_3:4398159-4398178 None:intergenic 55.0%
TAGCTCCTGCTTTCCAGCAC+CGG - chr2_3:4398189-4398208 Msa0272840:CDS 55.0%
! TGCTATGTTACGTGCCGGCA+TGG - chr2_3:4398253-4398272 Msa0272840:CDS 55.0%
ACCATGGGGAAGATACGCCG+CGG - chr2_3:4397929-4397948 Msa0272840:CDS 60.0%
GCCGCGGAGATAAGAGATCC+AGG - chr2_3:4397945-4397964 Msa0272840:CDS 60.0%
ACCTCGGAATTGACGTGCGG+CGG + chr2_3:4398036-4398055 None:intergenic 60.0%
AAGAATCAGCGGCGGCGTCA+CGG + chr2_3:4398151-4398170 None:intergenic 60.0%
! GTGAACCGGTGCTGGAAAGC+AGG + chr2_3:4398197-4398216 None:intergenic 60.0%
GTCTGGTTAACCGCCGGCAT+CGG + chr2_3:4398221-4398240 None:intergenic 60.0%
! AGTGGATTCCACGCGACGGT+TGG - chr2_3:4398332-4398351 Msa0272840:CDS 60.0%
TCCGCGGCGTATCTTCCCCA+TGG + chr2_3:4397933-4397952 None:intergenic 65.0%
TCCGCCGCACGTCAATTCCG+AGG - chr2_3:4398032-4398051 Msa0272840:CDS 65.0%
GCATCGGAGTGAACCGGTGC+TGG + chr2_3:4398205-4398224 None:intergenic 65.0%
!! GCACCGGTTCACTCCGATGC+CGG - chr2_3:4398205-4398224 Msa0272840:CDS 65.0%
! GGCGAGTGGATTCCACGCGA+CGG - chr2_3:4398328-4398347 Msa0272840:CDS 65.0%
TCTGTGCACCAACCGTCGCG+TGG + chr2_3:4398343-4398362 None:intergenic 65.0%
! CCGCCGGCATCGGAGTGAAC+CGG + chr2_3:4398211-4398230 None:intergenic 70.0%
CCGGTTCACTCCGATGCCGG+CGG - chr2_3:4398208-4398227 Msa0272840:CDS 70.0%
CAGCGGCGGCGTCACGGTCA+CGG + chr2_3:4398145-4398164 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 4397840 4398457 4397840 ID=Msa0272840;Name=Msa0272840
chr2_3 mRNA 4397840 4398457 4397840 ID=Msa0272840-mRNA-1;Parent=Msa0272840;Name=Msa0272840-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|205
chr2_3 exon 4397840 4398457 4397840 ID=Msa0272840-mRNA-1:exon:2221;Parent=Msa0272840-mRNA-1
chr2_3 CDS 4397840 4398457 4397840 ID=Msa0272840-mRNA-1:cds;Parent=Msa0272840-mRNA-1
Gene Sequence

>Msa0272840

ATGGCGCCGAAAGTTGTTAAGAACGGTGGCGTTAACGTGAACAATAACGGCAGCGTTAAGGAGGCGCATTTTAGAGGAGTAAGAAAGAGACCATGGGGAAGATACGCCGCGGAGATAAGAGATCCAGGAAAGAAAAGCCGCGTTTGGCTCGGAACTTTTGATACGGCGGAGGAAGCAGCGAGAGCTTACGACTCCGCCGCACGTCAATTCCGAGGTCCAAAGGCGAAAACAAACTTCCCTTTCCCTATAGAAAATGTTAAGATCCATAGCCCTAGCCAAAGCAGCACCGTTGAATGTTCAAGCCGTGACCGTGACGCCGCCGCTGATTCTTCTCCGCTTGATCTCAACTTAGCTCCTGCTTTCCAGCACCGGTTCACTCCGATGCCGGCGGTTAACCAGACGTTTTGTTTTGATGCTATGTTACGTGCCGGCATGGTGAAATCACGTCCTAGTTACGGTTATGGATGTGAATATAATCCTTCTATGGAGGCGAGTGGATTCCACGCGACGGTTGGTGCACAGAGTGATTCCGATTCTTCGTCTGTGATTGATCTGAACCACCATGGAAGAAGCTTCGATTTCGATCTTAACTACCCTCCTCTGGAAGATATGCTATGA
Protein sequence

>Msa0272840

MAPKVVKNGGVNVNNNGSVKEAHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAARAYDSAARQFRGPKAKTNFPFPIENVKIHSPSQSSTVECSSRDRDAAADSSPLDLNLAPAFQHRFTPMPAVNQTFCFDAMLRAGMVKSRPSYGYGCEYNPSMEASGFHATVGAQSDSDSSSVIDLNHHGRSFDFDLNYPPLEDML*