Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1437170 | XP_003616838.3 | 95.230 | 587 | 28 | 0 | 1 | 587 | 1 | 587 | 0.0 | 1139 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1437170 | sp|Q9M219|MTEFH_ARATH | 26.118 | 559 | 386 | 12 | 42 | 585 | 9 | 555 | 4.53e-51 | 187 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1437170 | G7K7G6 | 95.230 | 587 | 28 | 0 | 1 | 587 | 1 | 587 | 0.0 | 1139 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1437170 | TR | mTERF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0033950 | Msa1437170 | 0.806852 | 6.725969e-50 | -8.615850e-47 |
| Msa0036160 | Msa1437170 | 0.831682 | 1.453111e-55 | -8.615850e-47 |
| Msa1400220 | Msa1437170 | 0.801412 | 9.116388e-49 | -8.615850e-47 |
| Msa1411750 | Msa1437170 | 0.802940 | 4.419254e-49 | -8.615850e-47 |
| Msa0706600 | Msa1437170 | 0.810703 | 1.010139e-50 | -8.615850e-47 |
| Msa0738990 | Msa1437170 | 0.931315 | 4.527685e-94 | -8.615850e-47 |
| Msa0795920 | Msa1437170 | 0.822461 | 2.339374e-53 | -8.615850e-47 |
| Msa0819480 | Msa1437170 | 0.847289 | 1.270711e-59 | -8.615850e-47 |
| Msa0137550 | Msa1437170 | 0.808770 | 2.630774e-50 | -8.615850e-47 |
| Msa1302100 | Msa1437170 | 0.819366 | 1.206280e-52 | -8.615850e-47 |
| Msa0397540 | Msa1437170 | 0.802684 | 4.991872e-49 | -8.615850e-47 |
| Msa0420340 | Msa1437170 | 0.803676 | 3.111691e-49 | -8.615850e-47 |
| Msa0333730 | Msa1437170 | 0.808971 | 2.382395e-50 | -8.615850e-47 |
| Msa0358170 | Msa1437170 | 0.801063 | 1.074373e-48 | -8.615850e-47 |
| Msa0580420 | Msa1437170 | 0.823223 | 1.555222e-53 | -8.615850e-47 |
| Msa0859380 | Msa1437170 | 0.907879 | 3.142648e-81 | -8.615850e-47 |
| Msa0870150 | Msa1437170 | 0.805225 | 1.479408e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1437170 | MtrunA17_Chr5g0438661 | 95.230 | 587 | 28 | 0 | 1 | 587 | 33 | 619 | 0.0 | 1138 |
| Msa1437170 | MtrunA17_Chr8g0335121 | 26.422 | 545 | 374 | 11 | 48 | 575 | 18 | 552 | 2.22e-53 | 191 |
| Msa1437170 | MtrunA17_Chr7g0249711 | 24.909 | 550 | 386 | 11 | 46 | 575 | 30 | 572 | 3.25e-46 | 171 |
| Msa1437170 | MtrunA17_Chr7g0258521 | 36.655 | 281 | 149 | 8 | 34 | 306 | 15 | 274 | 1.53e-40 | 153 |
| Msa1437170 | MtrunA17_Chr7g0258521 | 35.602 | 191 | 121 | 2 | 390 | 579 | 274 | 463 | 4.07e-31 | 126 |
| Msa1437170 | MtrunA17_Chr8g0377781 | 20.690 | 319 | 233 | 7 | 256 | 571 | 62 | 363 | 9.69e-12 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1437170 | AT4G19650.2 | 46.705 | 516 | 273 | 2 | 68 | 583 | 79 | 592 | 6.64e-169 | 493 |
| Msa1437170 | AT4G19650.1 | 44.595 | 518 | 283 | 3 | 68 | 583 | 60 | 575 | 1.87e-155 | 458 |
| Msa1437170 | AT5G45113.1 | 42.823 | 418 | 233 | 2 | 168 | 583 | 1 | 414 | 5.73e-114 | 346 |
| Msa1437170 | AT5G06810.1 | 34.545 | 550 | 356 | 3 | 34 | 581 | 34 | 581 | 3.92e-104 | 326 |
| Msa1437170 | AT5G06811.1 | 36.062 | 513 | 321 | 3 | 76 | 581 | 65 | 577 | 1.22e-98 | 312 |
| Msa1437170 | AT3G60400.1 | 26.118 | 559 | 386 | 12 | 42 | 585 | 9 | 555 | 4.61e-52 | 187 |
| Msa1437170 | AT5G45115.2 | 47.692 | 65 | 34 | 0 | 57 | 121 | 58 | 122 | 3.56e-11 | 61.2 |
| Msa1437170 | AT5G45115.1 | 47.692 | 65 | 34 | 0 | 57 | 121 | 58 | 122 | 3.56e-11 | 61.2 |
| Msa1437170 | AT1G74120.1 | 25.311 | 241 | 151 | 6 | 347 | 579 | 186 | 405 | 6.26e-11 | 65.5 |
Find 94 sgRNAs with CRISPR-Local
Find 272 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGGAGAAAGAGCGGGAATT+TGG | 0.207920 | tig0028179:+9941 | None:intergenic |
| TTGAGCAAACATTCGATAAA+AGG | 0.208563 | tig0028179:-9001 | Msa1437170:CDS |
| TTGTGACCCGCTTATTAAAT+TGG | 0.211062 | tig0028179:-8849 | Msa1437170:CDS |
| AAAAGGTTCAAATTCGTTAA+TGG | 0.216359 | tig0028179:+9714 | None:intergenic |
| ATTTCAAGATTATGAAGATT+TGG | 0.259240 | tig0028179:-9494 | Msa1437170:CDS |
| CTTGCTGAAACTAGGGTATA+TGG | 0.266036 | tig0028179:-8813 | Msa1437170:CDS |
| TTTGAATTACATTTCTCTTC+AGG | 0.267697 | tig0028179:+8645 | None:intergenic |
| GAATTGGGATTGAGAGTAAA+TGG | 0.269440 | tig0028179:-9369 | Msa1437170:CDS |
| ATTCTGCATAAATCAGCTTT+TGG | 0.277612 | tig0028179:+8947 | None:intergenic |
| CTTGATTGGTTGAAAAGAAT+TGG | 0.278292 | tig0028179:-9385 | Msa1437170:CDS |
| CTCTTCAGGATTAGAATCTT+AGG | 0.284996 | tig0028179:+8659 | None:intergenic |
| TGCCAGATTGTTGGACCTTC+AGG | 0.287973 | tig0028179:+8407 | None:intergenic |
| AGGAAGCTGTTCTTATTTCT+AGG | 0.298757 | tig0028179:-9199 | Msa1437170:CDS |
| TTTCAAGATTATGAAGATTT+GGG | 0.302755 | tig0028179:-9493 | Msa1437170:CDS |
| TCCATTGGAGCTTATTAGTT+TGG | 0.304432 | tig0028179:-8912 | Msa1437170:CDS |
| AAAGGTTCAAATTCGTTAAT+GGG | 0.316048 | tig0028179:+9715 | None:intergenic |
| GTGGCGCGTTTGATGTAAAT+TGG | 0.317940 | tig0028179:+9919 | None:intergenic |
| AGGAATTAATCACACGGAAT+TGG | 0.320142 | tig0028179:-9680 | Msa1437170:CDS |
| ATCGTCAGGGATGTTGATTT+TGG | 0.327979 | tig0028179:+9780 | None:intergenic |
| AGTTTGTTGTTGCTCTTGAT+TGG | 0.332842 | tig0028179:-9399 | Msa1437170:CDS |
| TGTTTGTTGTCCTTTGCTTT+TGG | 0.333098 | tig0028179:-9440 | Msa1437170:CDS |
| TGGAGAAAGAGCGGGAATTT+GGG | 0.341540 | tig0028179:+9942 | None:intergenic |
| AGAGCGGTTTGTAAGGAGTT+AGG | 0.349298 | tig0028179:-8974 | Msa1437170:CDS |
| TTTAATAAGCGGGTCACAAT+AGG | 0.351904 | tig0028179:+8853 | None:intergenic |
| TTTCATGTATTGTGTTATCA+TGG | 0.353729 | tig0028179:-9598 | Msa1437170:CDS |
| AGGGAGAGGTGATCAGTTAC+AGG | 0.358936 | tig0028179:-8750 | Msa1437170:CDS |
| CAAAGAAAATAACAACCTTT+AGG | 0.370775 | tig0028179:+9646 | None:intergenic |
| TATCTCACAAGACATTCTAT+TGG | 0.371889 | tig0028179:+8587 | None:intergenic |
| AAATGGAAGAAGATGGGTTT+TGG | 0.374297 | tig0028179:+10001 | None:intergenic |
| GAAGCAGTAAAATTGTTTCC+AGG | 0.374900 | tig0028179:-8770 | Msa1437170:CDS |
| CTGCCTCGTAGAAGCTGGTT+TGG | 0.378167 | tig0028179:-8717 | Msa1437170:CDS |
| TTGATTGGTTGAAAAGAATT+GGG | 0.388809 | tig0028179:-9384 | Msa1437170:CDS |
| TTTATACGTTGCCAGATTGT+TGG | 0.388911 | tig0028179:+8398 | None:intergenic |
| TTGAAAGAAATGGAAGAAGA+TGG | 0.405404 | tig0028179:+9994 | None:intergenic |
| TGGGTATGGAAATGGAGTTT+TGG | 0.409236 | tig0028179:-9524 | Msa1437170:CDS |
| ATCCTGAAGGTCCAACAATC+TGG | 0.424676 | tig0028179:-8409 | Msa1437170:CDS |
| ATCTCACAAGACATTCTATT+GGG | 0.431195 | tig0028179:+8588 | None:intergenic |
| AGGTTATAGAGCGGTTTGTA+AGG | 0.431374 | tig0028179:-8981 | Msa1437170:CDS |
| CGGCTTTCTTGCTGAAACTA+GGG | 0.439594 | tig0028179:-8820 | Msa1437170:CDS |
| GCTTATTAAATTGGAGAAAA+CGG | 0.440222 | tig0028179:-8840 | Msa1437170:CDS |
| TCTAGGTCGGTTTATTAAGT+CGG | 0.441271 | tig0028179:-9182 | Msa1437170:CDS |
| CTAGGTCGGTTTATTAAGTC+GGG | 0.441636 | tig0028179:-9181 | Msa1437170:CDS |
| TGATCAGTTACAGGAGAGAT+TGG | 0.453405 | tig0028179:-8741 | Msa1437170:CDS |
| TTCATGTATTGTGTTATCAT+GGG | 0.455291 | tig0028179:-9597 | Msa1437170:CDS |
| AGACCTTCCAACAACAAATT+CGG | 0.457193 | tig0028179:+9226 | None:intergenic |
| TGAAAGAAATGGAAGAAGAT+GGG | 0.458028 | tig0028179:+9995 | None:intergenic |
| ACACTTACTCGACAATATAT+CGG | 0.459640 | tig0028179:+9117 | None:intergenic |
| CATATGTATGATTTGTTCAA+GGG | 0.474363 | tig0028179:-9253 | Msa1437170:CDS |
| ACGGCTTTCTTGCTGAAACT+AGG | 0.474798 | tig0028179:-8821 | Msa1437170:CDS |
| ATCTTCGCCATTCGATTCCT+CGG | 0.482527 | tig0028179:+9571 | None:intergenic |
| TTCAATGTATGAGTGGTTGA+AGG | 0.494343 | tig0028179:-8519 | Msa1437170:CDS |
| ACATATGTATGATTTGTTCA+AGG | 0.498470 | tig0028179:-9254 | Msa1437170:CDS |
| GATCCGAATTTGTTGTTGGA+AGG | 0.498949 | tig0028179:-9229 | Msa1437170:CDS |
| TTAGGGTTGAAGAGAAAGAA+TGG | 0.499067 | tig0028179:+10075 | None:intergenic |
| TTGGACTGCCTCGTAGAAGC+TGG | 0.500999 | tig0028179:-8722 | Msa1437170:CDS |
| AGCTGTTCTTATTTCTAGGT+CGG | 0.502263 | tig0028179:-9195 | Msa1437170:CDS |
| CTTCTAAACAGAAACATAAG+AGG | 0.503889 | tig0028179:-8889 | Msa1437170:CDS |
| CTAGTTCTAGCACTTATAGC+TGG | 0.504313 | tig0028179:-9330 | Msa1437170:CDS |
| TGTATGAGTGGTTGAAGGAA+AGG | 0.504426 | tig0028179:-8514 | Msa1437170:CDS |
| ATTTGTTGTTGGAAGGTCTA+GGG | 0.509859 | tig0028179:-9222 | Msa1437170:CDS |
| TATGGAAAACTCTGAGGAGA+TGG | 0.511741 | tig0028179:-8795 | Msa1437170:CDS |
| AATTTGTTGTTGGAAGGTCT+AGG | 0.516290 | tig0028179:-9223 | Msa1437170:CDS |
| GTAAAATTGTTTCCAGGGAG+AGG | 0.518160 | tig0028179:-8764 | Msa1437170:CDS |
| GTAAATTGGTGGAGAAAGAG+CGG | 0.528173 | tig0028179:+9933 | None:intergenic |
| TCATGTATTGTGTTATCATG+GGG | 0.535058 | tig0028179:-9596 | Msa1437170:CDS |
| TAGGGTTGAAGAGAAAGAAT+GGG | 0.541091 | tig0028179:+10076 | None:intergenic |
| AAGCAGTAAAATTGTTTCCA+GGG | 0.543083 | tig0028179:-8769 | Msa1437170:CDS |
| ATGAGGAAATTGATGAAATG+TGG | 0.545861 | tig0028179:+9805 | None:intergenic |
| GCCAAACTAATAAGCTCCAA+TGG | 0.546201 | tig0028179:+8911 | None:intergenic |
| AATCATAAACGATGATCCAT+TGG | 0.546725 | tig0028179:-8927 | Msa1437170:CDS |
| ATATGAAACTATGGTACTCA+AGG | 0.555816 | tig0028179:+8469 | None:intergenic |
| AGAAAGAGCGGGAATTTGGG+TGG | 0.556121 | tig0028179:+9945 | None:intergenic |
| TTGTAGCACTGCGATTAGAA+TGG | 0.562098 | tig0028179:-8693 | Msa1437170:CDS |
| TGTAACTGATCACCTCTCCC+TGG | 0.577413 | tig0028179:+8752 | None:intergenic |
| TAAATTGGTGGAGAAAGAGC+GGG | 0.577774 | tig0028179:+9934 | None:intergenic |
| CAGAAACATAAGAGGAGTGG+AGG | 0.579021 | tig0028179:-8881 | Msa1437170:CDS |
| TGTGTTATCATGGGGTTCCG+AGG | 0.589302 | tig0028179:-9588 | Msa1437170:CDS |
| GAAAGTGAAAGAGTTCCCAT+TGG | 0.599604 | tig0028179:+10114 | None:intergenic |
| AAACAGAAACATAAGAGGAG+TGG | 0.607869 | tig0028179:-8884 | Msa1437170:CDS |
| TGTTGTTGGAAGGTCTAGGG+AGG | 0.611420 | tig0028179:-9219 | Msa1437170:CDS |
| GCGCGTTTGATGTAAATTGG+TGG | 0.612365 | tig0028179:+9922 | None:intergenic |
| TTCGATAAAAGGTTATAGAG+CGG | 0.623688 | tig0028179:-8990 | Msa1437170:CDS |
| TGGGGTTCCGAGGAATCGAA+TGG | 0.633090 | tig0028179:-9578 | Msa1437170:CDS |
| AGAAACATAAGAGGAGTGGA+GGG | 0.636056 | tig0028179:-8880 | Msa1437170:CDS |
| ATATGTATGATTTGTTCAAG+GGG | 0.636636 | tig0028179:-9252 | Msa1437170:CDS |
| ACATCACCAACCAAAAGCAA+AGG | 0.637648 | tig0028179:+9430 | None:intergenic |
| CAAGAGTTTCAATGTATGAG+TGG | 0.645039 | tig0028179:-8526 | Msa1437170:CDS |
| AAAATCAACATCCCTGACGA+TGG | 0.646277 | tig0028179:-9778 | Msa1437170:CDS |
| TATATTGTCGAGTAAGTGTG+TGG | 0.647992 | tig0028179:-9113 | Msa1437170:CDS |
| TTTGTGAATATGCATCCTGA+AGG | 0.654931 | tig0028179:-8422 | Msa1437170:CDS |
| AGGGTATATGGAAAACTCTG+AGG | 0.686033 | tig0028179:-8801 | Msa1437170:CDS |
| TATGTATGATTTGTTCAAGG+GGG | 0.703088 | tig0028179:-9251 | Msa1437170:CDS |
| GAGTTTAGGAATTAATCACA+CGG | 0.713083 | tig0028179:-9686 | Msa1437170:CDS |
| AATCCAAACCAGCTTCTACG+AGG | 0.736492 | tig0028179:+8714 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTGTATAATATTCGAA+TGG | - | tig0028179:9413-9432 | Msa1437170:CDS | 15.0% |
| !!! | TTTTTCATTATATGAAACTA+TGG | + | tig0028179:10024-10043 | None:intergenic | 15.0% |
| !! | TAGTTTCATATAATGAAAAA+CGG | - | tig0028179:10024-10043 | Msa1437170:CDS | 15.0% |
| !!! | TTTTTTGTATAATATTCGAA+TGG | - | tig0028179:9413-9432 | Msa1437170:CDS | 15.0% |
| !!! | TTTTTCATTATATGAAACTA+TGG | + | tig0028179:10024-10043 | None:intergenic | 15.0% |
| !! | TAGTTTCATATAATGAAAAA+CGG | - | tig0028179:10024-10043 | Msa1437170:CDS | 15.0% |
| !! | ATTTCAAGATTATGAAGATT+TGG | - | tig0028179:8987-9006 | Msa1437170:CDS | 20.0% |
| !! | TTTCAAGATTATGAAGATTT+GGG | - | tig0028179:8988-9007 | Msa1437170:CDS | 20.0% |
| !! | GATTTCTTAAAAAACACTTT+AGG | - | tig0028179:9867-9886 | Msa1437170:CDS | 20.0% |
| !! | ATTTCAAGATTATGAAGATT+TGG | - | tig0028179:8987-9006 | Msa1437170:CDS | 20.0% |
| !! | TTTCAAGATTATGAAGATTT+GGG | - | tig0028179:8988-9007 | Msa1437170:CDS | 20.0% |
| !! | GATTTCTTAAAAAACACTTT+AGG | - | tig0028179:9867-9886 | Msa1437170:CDS | 20.0% |
| !!! | GGTTGAATTTTTGAAAGAAA+TGG | + | tig0028179:8500-8519 | None:intergenic | 25.0% |
| ! | AAAGGTTCAAATTCGTTAAT+GGG | + | tig0028179:8769-8788 | None:intergenic | 25.0% |
| ! | AAAAGGTTCAAATTCGTTAA+TGG | + | tig0028179:8770-8789 | None:intergenic | 25.0% |
| !! | ATTCCTAAACTCTCTAAAAA+AGG | + | tig0028179:8787-8806 | None:intergenic | 25.0% |
| ! | TTGGAAAAATTTCTACCTAA+AGG | - | tig0028179:8820-8839 | Msa1437170:CDS | 25.0% |
| ! | CAAAGAAAATAACAACCTTT+AGG | + | tig0028179:8838-8857 | None:intergenic | 25.0% |
| ! | TTTCATGTATTGTGTTATCA+TGG | - | tig0028179:8883-8902 | Msa1437170:CDS | 25.0% |
| ! | TTCATGTATTGTGTTATCAT+GGG | - | tig0028179:8884-8903 | Msa1437170:CDS | 25.0% |
| !! | TTGATTGGTTGAAAAGAATT+GGG | - | tig0028179:9097-9116 | Msa1437170:CDS | 25.0% |
| !!! | TTTAGAGTTTTTTCATCAAG+TGG | - | tig0028179:9191-9210 | Msa1437170:CDS | 25.0% |
| !!! | TTAGAGTTTTTTCATCAAGT+GGG | - | tig0028179:9192-9211 | Msa1437170:CDS | 25.0% |
| !!! | ACATATGTATGATTTGTTCA+AGG | - | tig0028179:9227-9246 | Msa1437170:CDS | 25.0% |
| !!! | CATATGTATGATTTGTTCAA+GGG | - | tig0028179:9228-9247 | Msa1437170:CDS | 25.0% |
| !!! | ATATGTATGATTTGTTCAAG+GGG | - | tig0028179:9229-9248 | Msa1437170:CDS | 25.0% |
| !! | TTTTCTCCAATTTAATAAGC+GGG | + | tig0028179:9641-9660 | None:intergenic | 25.0% |
| !! | GTTTTCTCCAATTTAATAAG+CGG | + | tig0028179:9642-9661 | None:intergenic | 25.0% |
| ! | GCTTATTAAATTGGAGAAAA+CGG | - | tig0028179:9641-9660 | Msa1437170:CDS | 25.0% |
| ! | TTTGAATTACATTTCTCTTC+AGG | + | tig0028179:9839-9858 | None:intergenic | 25.0% |
| !!! | GGTTGAATTTTTGAAAGAAA+TGG | + | tig0028179:8500-8519 | None:intergenic | 25.0% |
| ! | AAAGGTTCAAATTCGTTAAT+GGG | + | tig0028179:8769-8788 | None:intergenic | 25.0% |
| ! | AAAAGGTTCAAATTCGTTAA+TGG | + | tig0028179:8770-8789 | None:intergenic | 25.0% |
| !! | ATTCCTAAACTCTCTAAAAA+AGG | + | tig0028179:8787-8806 | None:intergenic | 25.0% |
| ! | TTGGAAAAATTTCTACCTAA+AGG | - | tig0028179:8820-8839 | Msa1437170:CDS | 25.0% |
| ! | CAAAGAAAATAACAACCTTT+AGG | + | tig0028179:8838-8857 | None:intergenic | 25.0% |
| ! | TTTCATGTATTGTGTTATCA+TGG | - | tig0028179:8883-8902 | Msa1437170:CDS | 25.0% |
| ! | TTCATGTATTGTGTTATCAT+GGG | - | tig0028179:8884-8903 | Msa1437170:CDS | 25.0% |
| !! | TTGATTGGTTGAAAAGAATT+GGG | - | tig0028179:9097-9116 | Msa1437170:CDS | 25.0% |
| !!! | TTTAGAGTTTTTTCATCAAG+TGG | - | tig0028179:9191-9210 | Msa1437170:CDS | 25.0% |
| !!! | TTAGAGTTTTTTCATCAAGT+GGG | - | tig0028179:9192-9211 | Msa1437170:CDS | 25.0% |
| !!! | ACATATGTATGATTTGTTCA+AGG | - | tig0028179:9227-9246 | Msa1437170:CDS | 25.0% |
| !!! | CATATGTATGATTTGTTCAA+GGG | - | tig0028179:9228-9247 | Msa1437170:CDS | 25.0% |
| !!! | ATATGTATGATTTGTTCAAG+GGG | - | tig0028179:9229-9248 | Msa1437170:CDS | 25.0% |
| !! | TTTTCTCCAATTTAATAAGC+GGG | + | tig0028179:9641-9660 | None:intergenic | 25.0% |
| !! | GTTTTCTCCAATTTAATAAG+CGG | + | tig0028179:9642-9661 | None:intergenic | 25.0% |
| ! | GCTTATTAAATTGGAGAAAA+CGG | - | tig0028179:9641-9660 | Msa1437170:CDS | 25.0% |
| ! | TTTGAATTACATTTCTCTTC+AGG | + | tig0028179:9839-9858 | None:intergenic | 25.0% |
| !!! | GTTTTTGGTGAGAAAAATTG+GGG | + | tig0028179:8447-8466 | None:intergenic | 30.0% |
| !!! | GGTTTTTGGTGAGAAAAATT+GGG | + | tig0028179:8448-8467 | None:intergenic | 30.0% |
| TGAAAGAAATGGAAGAAGAT+GGG | + | tig0028179:8489-8508 | None:intergenic | 30.0% | |
| TTGAAAGAAATGGAAGAAGA+TGG | + | tig0028179:8490-8509 | None:intergenic | 30.0% | |
| ATGAGGAAATTGATGAAATG+TGG | + | tig0028179:8679-8698 | None:intergenic | 30.0% | |
| !!! | GAACCTTTTTTAGAGAGTTT+AGG | - | tig0028179:8781-8800 | Msa1437170:CDS | 30.0% |
| GAGTTTAGGAATTAATCACA+CGG | - | tig0028179:8795-8814 | Msa1437170:CDS | 30.0% | |
| TCATGTATTGTGTTATCATG+GGG | - | tig0028179:8885-8904 | Msa1437170:CDS | 30.0% | |
| !!! | GAAATTTTTGGGTATGGAAA+TGG | - | tig0028179:8949-8968 | Msa1437170:CDS | 30.0% |
| ! | CTTGATTGGTTGAAAAGAAT+TGG | - | tig0028179:9096-9115 | Msa1437170:CDS | 30.0% |
| !! | TATGTATGATTTGTTCAAGG+GGG | - | tig0028179:9230-9249 | Msa1437170:CDS | 30.0% |
| ACACTTACTCGACAATATAT+CGG | + | tig0028179:9367-9386 | None:intergenic | 30.0% | |
| TTGAGCAAACATTCGATAAA+AGG | - | tig0028179:9480-9499 | Msa1437170:CDS | 30.0% | |
| TTCGATAAAAGGTTATAGAG+CGG | - | tig0028179:9491-9510 | Msa1437170:CDS | 30.0% | |
| ! | ATTCTGCATAAATCAGCTTT+TGG | + | tig0028179:9537-9556 | None:intergenic | 30.0% |
| AATCATAAACGATGATCCAT+TGG | - | tig0028179:9554-9573 | Msa1437170:CDS | 30.0% | |
| CTTCTAAACAGAAACATAAG+AGG | - | tig0028179:9592-9611 | Msa1437170:CDS | 30.0% | |
| AAGCAGTAAAATTGTTTCCA+GGG | - | tig0028179:9712-9731 | Msa1437170:CDS | 30.0% | |
| ATCTCACAAGACATTCTATT+GGG | + | tig0028179:9896-9915 | None:intergenic | 30.0% | |
| TATCTCACAAGACATTCTAT+TGG | + | tig0028179:9897-9916 | None:intergenic | 30.0% | |
| !! | ATACCCAACATACTTTTTAC+AGG | - | tig0028179:9914-9933 | Msa1437170:CDS | 30.0% |
| ATATGAAACTATGGTACTCA+AGG | + | tig0028179:10015-10034 | None:intergenic | 30.0% | |
| !!! | GTTTTTGGTGAGAAAAATTG+GGG | + | tig0028179:8447-8466 | None:intergenic | 30.0% |
| !!! | GGTTTTTGGTGAGAAAAATT+GGG | + | tig0028179:8448-8467 | None:intergenic | 30.0% |
| TGAAAGAAATGGAAGAAGAT+GGG | + | tig0028179:8489-8508 | None:intergenic | 30.0% | |
| TTGAAAGAAATGGAAGAAGA+TGG | + | tig0028179:8490-8509 | None:intergenic | 30.0% | |
| ATGAGGAAATTGATGAAATG+TGG | + | tig0028179:8679-8698 | None:intergenic | 30.0% | |
| !!! | GAACCTTTTTTAGAGAGTTT+AGG | - | tig0028179:8781-8800 | Msa1437170:CDS | 30.0% |
| GAGTTTAGGAATTAATCACA+CGG | - | tig0028179:8795-8814 | Msa1437170:CDS | 30.0% | |
| TCATGTATTGTGTTATCATG+GGG | - | tig0028179:8885-8904 | Msa1437170:CDS | 30.0% | |
| !!! | GAAATTTTTGGGTATGGAAA+TGG | - | tig0028179:8949-8968 | Msa1437170:CDS | 30.0% |
| ! | CTTGATTGGTTGAAAAGAAT+TGG | - | tig0028179:9096-9115 | Msa1437170:CDS | 30.0% |
| !! | TATGTATGATTTGTTCAAGG+GGG | - | tig0028179:9230-9249 | Msa1437170:CDS | 30.0% |
| ACACTTACTCGACAATATAT+CGG | + | tig0028179:9367-9386 | None:intergenic | 30.0% | |
| TTGAGCAAACATTCGATAAA+AGG | - | tig0028179:9480-9499 | Msa1437170:CDS | 30.0% | |
| TTCGATAAAAGGTTATAGAG+CGG | - | tig0028179:9491-9510 | Msa1437170:CDS | 30.0% | |
| ! | ATTCTGCATAAATCAGCTTT+TGG | + | tig0028179:9537-9556 | None:intergenic | 30.0% |
| AATCATAAACGATGATCCAT+TGG | - | tig0028179:9554-9573 | Msa1437170:CDS | 30.0% | |
| CTTCTAAACAGAAACATAAG+AGG | - | tig0028179:9592-9611 | Msa1437170:CDS | 30.0% | |
| AAGCAGTAAAATTGTTTCCA+GGG | - | tig0028179:9712-9731 | Msa1437170:CDS | 30.0% | |
| ATCTCACAAGACATTCTATT+GGG | + | tig0028179:9896-9915 | None:intergenic | 30.0% | |
| TATCTCACAAGACATTCTAT+TGG | + | tig0028179:9897-9916 | None:intergenic | 30.0% | |
| !! | ATACCCAACATACTTTTTAC+AGG | - | tig0028179:9914-9933 | Msa1437170:CDS | 30.0% |
| ATATGAAACTATGGTACTCA+AGG | + | tig0028179:10015-10034 | None:intergenic | 30.0% | |
| TAGGGTTGAAGAGAAAGAAT+GGG | + | tig0028179:8408-8427 | None:intergenic | 35.0% | |
| TTAGGGTTGAAGAGAAAGAA+TGG | + | tig0028179:8409-8428 | None:intergenic | 35.0% | |
| ! | TGAGAAAAATTGGGGTTTTG+GGG | + | tig0028179:8439-8458 | None:intergenic | 35.0% |
| ! | GTGAGAAAAATTGGGGTTTT+GGG | + | tig0028179:8440-8459 | None:intergenic | 35.0% |
| !!! | GGGTTTTTGGTGAGAAAAAT+TGG | + | tig0028179:8449-8468 | None:intergenic | 35.0% |
| !! | AAATGGAAGAAGATGGGTTT+TGG | + | tig0028179:8483-8502 | None:intergenic | 35.0% |
| !!! | TGTAGTTTTGTGTGTAGTGA+AGG | + | tig0028179:8621-8640 | None:intergenic | 35.0% |
| ! | GATGAAATGTGGAGAGTTTT+TGG | + | tig0028179:8668-8687 | None:intergenic | 35.0% |
| AGGAATTAATCACACGGAAT+TGG | - | tig0028179:8801-8820 | Msa1437170:CDS | 35.0% | |
| ! | ACCGAAGCAAGAGAAATTTT+TGG | - | tig0028179:8937-8956 | Msa1437170:CDS | 35.0% |
| CCCAAAAATTTCTCTTGCTT+CGG | + | tig0028179:8941-8960 | None:intergenic | 35.0% | |
| ! | CCGAAGCAAGAGAAATTTTT+GGG | - | tig0028179:8938-8957 | Msa1437170:CDS | 35.0% |
| !!! | GCAAGAGAAATTTTTGGGTA+TGG | - | tig0028179:8943-8962 | Msa1437170:CDS | 35.0% |
| !!! | TGTTTGTTGTCCTTTGCTTT+TGG | - | tig0028179:9041-9060 | Msa1437170:CDS | 35.0% |
| !! | AGTTTGTTGTTGCTCTTGAT+TGG | - | tig0028179:9082-9101 | Msa1437170:CDS | 35.0% |
| GAATTGGGATTGAGAGTAAA+TGG | - | tig0028179:9112-9131 | Msa1437170:CDS | 35.0% | |
| AGACCTTCCAACAACAAATT+CGG | + | tig0028179:9258-9277 | None:intergenic | 35.0% | |
| !! | AATTTGTTGTTGGAAGGTCT+AGG | - | tig0028179:9258-9277 | Msa1437170:CDS | 35.0% |
| !! | ATTTGTTGTTGGAAGGTCTA+GGG | - | tig0028179:9259-9278 | Msa1437170:CDS | 35.0% |
| ! | AGGAAGCTGTTCTTATTTCT+AGG | - | tig0028179:9282-9301 | Msa1437170:CDS | 35.0% |
| !! | AGCTGTTCTTATTTCTAGGT+CGG | - | tig0028179:9286-9305 | Msa1437170:CDS | 35.0% |
| ! | TCTAGGTCGGTTTATTAAGT+CGG | - | tig0028179:9299-9318 | Msa1437170:CDS | 35.0% |
| TATATTGTCGAGTAAGTGTG+TGG | - | tig0028179:9368-9387 | Msa1437170:CDS | 35.0% | |
| TCCATTGGAGCTTATTAGTT+TGG | - | tig0028179:9569-9588 | Msa1437170:CDS | 35.0% | |
| AAACAGAAACATAAGAGGAG+TGG | - | tig0028179:9597-9616 | Msa1437170:CDS | 35.0% | |
| TTTAATAAGCGGGTCACAAT+AGG | + | tig0028179:9631-9650 | None:intergenic | 35.0% | |
| TTGTGACCCGCTTATTAAAT+TGG | - | tig0028179:9632-9651 | Msa1437170:CDS | 35.0% | |
| GAAGCAGTAAAATTGTTTCC+AGG | - | tig0028179:9711-9730 | Msa1437170:CDS | 35.0% | |
| CTCTTCAGGATTAGAATCTT+AGG | + | tig0028179:9825-9844 | None:intergenic | 35.0% | |
| ! | CGTCCTGTAAAAAGTATGTT+GGG | + | tig0028179:9920-9939 | None:intergenic | 35.0% |
| ! | ACGTCCTGTAAAAAGTATGT+TGG | + | tig0028179:9921-9940 | None:intergenic | 35.0% |
| !! | AACATACTTTTTACAGGACG+TGG | - | tig0028179:9920-9939 | Msa1437170:CDS | 35.0% |
| CAAGAGTTTCAATGTATGAG+TGG | - | tig0028179:9955-9974 | Msa1437170:CDS | 35.0% | |
| TTCAATGTATGAGTGGTTGA+AGG | - | tig0028179:9962-9981 | Msa1437170:CDS | 35.0% | |
| TTTGTGAATATGCATCCTGA+AGG | - | tig0028179:10059-10078 | Msa1437170:CDS | 35.0% | |
| TTTATACGTTGCCAGATTGT+TGG | + | tig0028179:10086-10105 | None:intergenic | 35.0% | |
| TAGGGTTGAAGAGAAAGAAT+GGG | + | tig0028179:8408-8427 | None:intergenic | 35.0% | |
| TTAGGGTTGAAGAGAAAGAA+TGG | + | tig0028179:8409-8428 | None:intergenic | 35.0% | |
| ! | TGAGAAAAATTGGGGTTTTG+GGG | + | tig0028179:8439-8458 | None:intergenic | 35.0% |
| ! | GTGAGAAAAATTGGGGTTTT+GGG | + | tig0028179:8440-8459 | None:intergenic | 35.0% |
| !!! | GGGTTTTTGGTGAGAAAAAT+TGG | + | tig0028179:8449-8468 | None:intergenic | 35.0% |
| !! | AAATGGAAGAAGATGGGTTT+TGG | + | tig0028179:8483-8502 | None:intergenic | 35.0% |
| !!! | TGTAGTTTTGTGTGTAGTGA+AGG | + | tig0028179:8621-8640 | None:intergenic | 35.0% |
| ! | GATGAAATGTGGAGAGTTTT+TGG | + | tig0028179:8668-8687 | None:intergenic | 35.0% |
| AGGAATTAATCACACGGAAT+TGG | - | tig0028179:8801-8820 | Msa1437170:CDS | 35.0% | |
| ! | ACCGAAGCAAGAGAAATTTT+TGG | - | tig0028179:8937-8956 | Msa1437170:CDS | 35.0% |
| CCCAAAAATTTCTCTTGCTT+CGG | + | tig0028179:8941-8960 | None:intergenic | 35.0% | |
| ! | CCGAAGCAAGAGAAATTTTT+GGG | - | tig0028179:8938-8957 | Msa1437170:CDS | 35.0% |
| !!! | GCAAGAGAAATTTTTGGGTA+TGG | - | tig0028179:8943-8962 | Msa1437170:CDS | 35.0% |
| !!! | TGTTTGTTGTCCTTTGCTTT+TGG | - | tig0028179:9041-9060 | Msa1437170:CDS | 35.0% |
| !! | AGTTTGTTGTTGCTCTTGAT+TGG | - | tig0028179:9082-9101 | Msa1437170:CDS | 35.0% |
| GAATTGGGATTGAGAGTAAA+TGG | - | tig0028179:9112-9131 | Msa1437170:CDS | 35.0% | |
| AGACCTTCCAACAACAAATT+CGG | + | tig0028179:9258-9277 | None:intergenic | 35.0% | |
| !! | AATTTGTTGTTGGAAGGTCT+AGG | - | tig0028179:9258-9277 | Msa1437170:CDS | 35.0% |
| !! | ATTTGTTGTTGGAAGGTCTA+GGG | - | tig0028179:9259-9278 | Msa1437170:CDS | 35.0% |
| ! | AGGAAGCTGTTCTTATTTCT+AGG | - | tig0028179:9282-9301 | Msa1437170:CDS | 35.0% |
| !! | AGCTGTTCTTATTTCTAGGT+CGG | - | tig0028179:9286-9305 | Msa1437170:CDS | 35.0% |
| ! | TCTAGGTCGGTTTATTAAGT+CGG | - | tig0028179:9299-9318 | Msa1437170:CDS | 35.0% |
| TATATTGTCGAGTAAGTGTG+TGG | - | tig0028179:9368-9387 | Msa1437170:CDS | 35.0% | |
| TCCATTGGAGCTTATTAGTT+TGG | - | tig0028179:9569-9588 | Msa1437170:CDS | 35.0% | |
| AAACAGAAACATAAGAGGAG+TGG | - | tig0028179:9597-9616 | Msa1437170:CDS | 35.0% | |
| TTTAATAAGCGGGTCACAAT+AGG | + | tig0028179:9631-9650 | None:intergenic | 35.0% | |
| TTGTGACCCGCTTATTAAAT+TGG | - | tig0028179:9632-9651 | Msa1437170:CDS | 35.0% | |
| GAAGCAGTAAAATTGTTTCC+AGG | - | tig0028179:9711-9730 | Msa1437170:CDS | 35.0% | |
| CTCTTCAGGATTAGAATCTT+AGG | + | tig0028179:9825-9844 | None:intergenic | 35.0% | |
| ! | CGTCCTGTAAAAAGTATGTT+GGG | + | tig0028179:9920-9939 | None:intergenic | 35.0% |
| ! | ACGTCCTGTAAAAAGTATGT+TGG | + | tig0028179:9921-9940 | None:intergenic | 35.0% |
| !! | AACATACTTTTTACAGGACG+TGG | - | tig0028179:9920-9939 | Msa1437170:CDS | 35.0% |
| CAAGAGTTTCAATGTATGAG+TGG | - | tig0028179:9955-9974 | Msa1437170:CDS | 35.0% | |
| TTCAATGTATGAGTGGTTGA+AGG | - | tig0028179:9962-9981 | Msa1437170:CDS | 35.0% | |
| TTTGTGAATATGCATCCTGA+AGG | - | tig0028179:10059-10078 | Msa1437170:CDS | 35.0% | |
| TTTATACGTTGCCAGATTGT+TGG | + | tig0028179:10086-10105 | None:intergenic | 35.0% | |
| ! | GGTGAGAAAAATTGGGGTTT+TGG | + | tig0028179:8441-8460 | None:intergenic | 40.0% |
| ! | GGTGCAAGAAATTGGGTTTT+TGG | + | tig0028179:8462-8481 | None:intergenic | 40.0% |
| !! | GGGTTTTGGTGCAAGAAATT+GGG | + | tig0028179:8469-8488 | None:intergenic | 40.0% |
| !! | TGGGTTTTGGTGCAAGAAAT+TGG | + | tig0028179:8470-8489 | None:intergenic | 40.0% |
| !! | GGTGGATTTTGAACAGTTCA+AGG | + | tig0028179:8521-8540 | None:intergenic | 40.0% |
| TAAATTGGTGGAGAAAGAGC+GGG | + | tig0028179:8550-8569 | None:intergenic | 40.0% | |
| GTAAATTGGTGGAGAAAGAG+CGG | + | tig0028179:8551-8570 | None:intergenic | 40.0% | |
| ! | ACGTTGTGCTTCAATTTTCG+TGG | + | tig0028179:8584-8603 | None:intergenic | 40.0% |
| !!! | GGATGTTGATTTTGGAGATG+AGG | + | tig0028179:8696-8715 | None:intergenic | 40.0% |
| !!! | ATCGTCAGGGATGTTGATTT+TGG | + | tig0028179:8704-8723 | None:intergenic | 40.0% |
| AAAATCAACATCCCTGACGA+TGG | - | tig0028179:8703-8722 | Msa1437170:CDS | 40.0% | |
| ! | TGGGTATGGAAATGGAGTTT+TGG | - | tig0028179:8957-8976 | Msa1437170:CDS | 40.0% |
| !! | TGTTGTCCTTTGCTTTTGGT+TGG | - | tig0028179:9045-9064 | Msa1437170:CDS | 40.0% |
| ACATCACCAACCAAAAGCAA+AGG | + | tig0028179:9054-9073 | None:intergenic | 40.0% | |
| !! | CTAGTTCTAGCACTTATAGC+TGG | - | tig0028179:9151-9170 | Msa1437170:CDS | 40.0% |
| !! | GATCCGAATTTGTTGTTGGA+AGG | - | tig0028179:9252-9271 | Msa1437170:CDS | 40.0% |
| ! | CTAGGTCGGTTTATTAAGTC+GGG | - | tig0028179:9300-9319 | Msa1437170:CDS | 40.0% |
| AGGTTATAGAGCGGTTTGTA+AGG | - | tig0028179:9500-9519 | Msa1437170:CDS | 40.0% | |
| GCCAAACTAATAAGCTCCAA+TGG | + | tig0028179:9573-9592 | None:intergenic | 40.0% | |
| AGAAACATAAGAGGAGTGGA+GGG | - | tig0028179:9601-9620 | Msa1437170:CDS | 40.0% | |
| CTTGCTGAAACTAGGGTATA+TGG | - | tig0028179:9668-9687 | Msa1437170:CDS | 40.0% | |
| AGGGTATATGGAAAACTCTG+AGG | - | tig0028179:9680-9699 | Msa1437170:CDS | 40.0% | |
| ! | TATGGAAAACTCTGAGGAGA+TGG | - | tig0028179:9686-9705 | Msa1437170:CDS | 40.0% |
| GTAAAATTGTTTCCAGGGAG+AGG | - | tig0028179:9717-9736 | Msa1437170:CDS | 40.0% | |
| TGATCAGTTACAGGAGAGAT+TGG | - | tig0028179:9740-9759 | Msa1437170:CDS | 40.0% | |
| TTGTAGCACTGCGATTAGAA+TGG | - | tig0028179:9788-9807 | Msa1437170:CDS | 40.0% | |
| TGTATGAGTGGTTGAAGGAA+AGG | - | tig0028179:9967-9986 | Msa1437170:CDS | 40.0% | |
| ! | GGTGAGAAAAATTGGGGTTT+TGG | + | tig0028179:8441-8460 | None:intergenic | 40.0% |
| ! | GGTGCAAGAAATTGGGTTTT+TGG | + | tig0028179:8462-8481 | None:intergenic | 40.0% |
| !! | GGGTTTTGGTGCAAGAAATT+GGG | + | tig0028179:8469-8488 | None:intergenic | 40.0% |
| !! | TGGGTTTTGGTGCAAGAAAT+TGG | + | tig0028179:8470-8489 | None:intergenic | 40.0% |
| !! | GGTGGATTTTGAACAGTTCA+AGG | + | tig0028179:8521-8540 | None:intergenic | 40.0% |
| TAAATTGGTGGAGAAAGAGC+GGG | + | tig0028179:8550-8569 | None:intergenic | 40.0% | |
| GTAAATTGGTGGAGAAAGAG+CGG | + | tig0028179:8551-8570 | None:intergenic | 40.0% | |
| ! | ACGTTGTGCTTCAATTTTCG+TGG | + | tig0028179:8584-8603 | None:intergenic | 40.0% |
| !!! | GGATGTTGATTTTGGAGATG+AGG | + | tig0028179:8696-8715 | None:intergenic | 40.0% |
| !!! | ATCGTCAGGGATGTTGATTT+TGG | + | tig0028179:8704-8723 | None:intergenic | 40.0% |
| AAAATCAACATCCCTGACGA+TGG | - | tig0028179:8703-8722 | Msa1437170:CDS | 40.0% | |
| ! | TGGGTATGGAAATGGAGTTT+TGG | - | tig0028179:8957-8976 | Msa1437170:CDS | 40.0% |
| !! | TGTTGTCCTTTGCTTTTGGT+TGG | - | tig0028179:9045-9064 | Msa1437170:CDS | 40.0% |
| ACATCACCAACCAAAAGCAA+AGG | + | tig0028179:9054-9073 | None:intergenic | 40.0% | |
| !! | CTAGTTCTAGCACTTATAGC+TGG | - | tig0028179:9151-9170 | Msa1437170:CDS | 40.0% |
| !! | GATCCGAATTTGTTGTTGGA+AGG | - | tig0028179:9252-9271 | Msa1437170:CDS | 40.0% |
| ! | CTAGGTCGGTTTATTAAGTC+GGG | - | tig0028179:9300-9319 | Msa1437170:CDS | 40.0% |
| AGGTTATAGAGCGGTTTGTA+AGG | - | tig0028179:9500-9519 | Msa1437170:CDS | 40.0% | |
| GCCAAACTAATAAGCTCCAA+TGG | + | tig0028179:9573-9592 | None:intergenic | 40.0% | |
| AGAAACATAAGAGGAGTGGA+GGG | - | tig0028179:9601-9620 | Msa1437170:CDS | 40.0% | |
| CTTGCTGAAACTAGGGTATA+TGG | - | tig0028179:9668-9687 | Msa1437170:CDS | 40.0% | |
| AGGGTATATGGAAAACTCTG+AGG | - | tig0028179:9680-9699 | Msa1437170:CDS | 40.0% | |
| ! | TATGGAAAACTCTGAGGAGA+TGG | - | tig0028179:9686-9705 | Msa1437170:CDS | 40.0% |
| GTAAAATTGTTTCCAGGGAG+AGG | - | tig0028179:9717-9736 | Msa1437170:CDS | 40.0% | |
| TGATCAGTTACAGGAGAGAT+TGG | - | tig0028179:9740-9759 | Msa1437170:CDS | 40.0% | |
| TTGTAGCACTGCGATTAGAA+TGG | - | tig0028179:9788-9807 | Msa1437170:CDS | 40.0% | |
| TGTATGAGTGGTTGAAGGAA+AGG | - | tig0028179:9967-9986 | Msa1437170:CDS | 40.0% | |
| !!! | GGTTTTGGGGTGTGGAATTA+GGG | + | tig0028179:8426-8445 | None:intergenic | 45.0% |
| !!! | AAAATTGGGGTTTTGGGGTG+TGG | + | tig0028179:8434-8453 | None:intergenic | 45.0% |
| TGGAGAAAGAGCGGGAATTT+GGG | + | tig0028179:8542-8561 | None:intergenic | 45.0% | |
| GCGCGTTTGATGTAAATTGG+TGG | + | tig0028179:8562-8581 | None:intergenic | 45.0% | |
| GTGGCGCGTTTGATGTAAAT+TGG | + | tig0028179:8565-8584 | None:intergenic | 45.0% | |
| ATCTTCGCCATTCGATTCCT+CGG | + | tig0028179:8913-8932 | None:intergenic | 45.0% | |
| AGAGCGGTTTGTAAGGAGTT+AGG | - | tig0028179:9507-9526 | Msa1437170:CDS | 45.0% | |
| CAGAAACATAAGAGGAGTGG+AGG | - | tig0028179:9600-9619 | Msa1437170:CDS | 45.0% | |
| ACGGCTTTCTTGCTGAAACT+AGG | - | tig0028179:9660-9679 | Msa1437170:CDS | 45.0% | |
| CGGCTTTCTTGCTGAAACTA+GGG | - | tig0028179:9661-9680 | Msa1437170:CDS | 45.0% | |
| AATCCAAACCAGCTTCTACG+AGG | + | tig0028179:9770-9789 | None:intergenic | 45.0% | |
| ATCCTGAAGGTCCAACAATC+TGG | - | tig0028179:10072-10091 | Msa1437170:CDS | 45.0% | |
| !!! | GGTTTTGGGGTGTGGAATTA+GGG | + | tig0028179:8426-8445 | None:intergenic | 45.0% |
| !!! | AAAATTGGGGTTTTGGGGTG+TGG | + | tig0028179:8434-8453 | None:intergenic | 45.0% |
| TGGAGAAAGAGCGGGAATTT+GGG | + | tig0028179:8542-8561 | None:intergenic | 45.0% | |
| GCGCGTTTGATGTAAATTGG+TGG | + | tig0028179:8562-8581 | None:intergenic | 45.0% | |
| GTGGCGCGTTTGATGTAAAT+TGG | + | tig0028179:8565-8584 | None:intergenic | 45.0% | |
| ATCTTCGCCATTCGATTCCT+CGG | + | tig0028179:8913-8932 | None:intergenic | 45.0% | |
| AGAGCGGTTTGTAAGGAGTT+AGG | - | tig0028179:9507-9526 | Msa1437170:CDS | 45.0% | |
| CAGAAACATAAGAGGAGTGG+AGG | - | tig0028179:9600-9619 | Msa1437170:CDS | 45.0% | |
| ACGGCTTTCTTGCTGAAACT+AGG | - | tig0028179:9660-9679 | Msa1437170:CDS | 45.0% | |
| CGGCTTTCTTGCTGAAACTA+GGG | - | tig0028179:9661-9680 | Msa1437170:CDS | 45.0% | |
| AATCCAAACCAGCTTCTACG+AGG | + | tig0028179:9770-9789 | None:intergenic | 45.0% | |
| ATCCTGAAGGTCCAACAATC+TGG | - | tig0028179:10072-10091 | Msa1437170:CDS | 45.0% | |
| !!! | GGGTTTTGGGGTGTGGAATT+AGG | + | tig0028179:8427-8446 | None:intergenic | 50.0% |
| AGAAAGAGCGGGAATTTGGG+TGG | + | tig0028179:8539-8558 | None:intergenic | 50.0% | |
| GTGGAGAAAGAGCGGGAATT+TGG | + | tig0028179:8543-8562 | None:intergenic | 50.0% | |
| GAAAAACGTCGCCATCGTCA+GGG | + | tig0028179:8717-8736 | None:intergenic | 50.0% | |
| ! | ACGTTTTTCGTGCTCTCAGC+AGG | - | tig0028179:8728-8747 | Msa1437170:CDS | 50.0% |
| TGTGTTATCATGGGGTTCCG+AGG | - | tig0028179:8893-8912 | Msa1437170:CDS | 50.0% | |
| !! | GGGGGATCCGAATTTGTTGT+TGG | - | tig0028179:9248-9267 | Msa1437170:CDS | 50.0% |
| TGTTGTTGGAAGGTCTAGGG+AGG | - | tig0028179:9262-9281 | Msa1437170:CDS | 50.0% | |
| TGTAACTGATCACCTCTCCC+TGG | + | tig0028179:9732-9751 | None:intergenic | 50.0% | |
| AGGGAGAGGTGATCAGTTAC+AGG | - | tig0028179:9731-9750 | Msa1437170:CDS | 50.0% | |
| TGCCAGATTGTTGGACCTTC+AGG | + | tig0028179:10077-10096 | None:intergenic | 50.0% | |
| !!! | GGGTTTTGGGGTGTGGAATT+AGG | + | tig0028179:8427-8446 | None:intergenic | 50.0% |
| AGAAAGAGCGGGAATTTGGG+TGG | + | tig0028179:8539-8558 | None:intergenic | 50.0% | |
| GTGGAGAAAGAGCGGGAATT+TGG | + | tig0028179:8543-8562 | None:intergenic | 50.0% | |
| GAAAAACGTCGCCATCGTCA+GGG | + | tig0028179:8717-8736 | None:intergenic | 50.0% | |
| ! | ACGTTTTTCGTGCTCTCAGC+AGG | - | tig0028179:8728-8747 | Msa1437170:CDS | 50.0% |
| TGTGTTATCATGGGGTTCCG+AGG | - | tig0028179:8893-8912 | Msa1437170:CDS | 50.0% | |
| !! | GGGGGATCCGAATTTGTTGT+TGG | - | tig0028179:9248-9267 | Msa1437170:CDS | 50.0% |
| TGTTGTTGGAAGGTCTAGGG+AGG | - | tig0028179:9262-9281 | Msa1437170:CDS | 50.0% | |
| TGTAACTGATCACCTCTCCC+TGG | + | tig0028179:9732-9751 | None:intergenic | 50.0% | |
| AGGGAGAGGTGATCAGTTAC+AGG | - | tig0028179:9731-9750 | Msa1437170:CDS | 50.0% | |
| TGCCAGATTGTTGGACCTTC+AGG | + | tig0028179:10077-10096 | None:intergenic | 50.0% | |
| CGAAAAACGTCGCCATCGTC+AGG | + | tig0028179:8718-8737 | None:intergenic | 55.0% | |
| TGGGGTTCCGAGGAATCGAA+TGG | - | tig0028179:8903-8922 | Msa1437170:CDS | 55.0% | |
| TTGGACTGCCTCGTAGAAGC+TGG | - | tig0028179:9759-9778 | Msa1437170:CDS | 55.0% | |
| CTGCCTCGTAGAAGCTGGTT+TGG | - | tig0028179:9764-9783 | Msa1437170:CDS | 55.0% | |
| CGAAAAACGTCGCCATCGTC+AGG | + | tig0028179:8718-8737 | None:intergenic | 55.0% | |
| TGGGGTTCCGAGGAATCGAA+TGG | - | tig0028179:8903-8922 | Msa1437170:CDS | 55.0% | |
| TTGGACTGCCTCGTAGAAGC+TGG | - | tig0028179:9759-9778 | Msa1437170:CDS | 55.0% | |
| CTGCCTCGTAGAAGCTGGTT+TGG | - | tig0028179:9764-9783 | Msa1437170:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0028179 | gene | 8370 | 10133 | 8370 | ID=Msa1437170;Name=Msa1437170 |
| tig0028179 | mRNA | 8370 | 10133 | 8370 | ID=Msa1437170-mRNA-1;Parent=Msa1437170;Name=Msa1437170-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|587 |
| tig0028179 | exon | 8370 | 10133 | 8370 | ID=Msa1437170-mRNA-1:exon:10513;Parent=Msa1437170-mRNA-1 |
| tig0028179 | CDS | 8370 | 10133 | 8370 | ID=Msa1437170-mRNA-1:cds;Parent=Msa1437170-mRNA-1 |
| Gene Sequence |
| Protein sequence |
