Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1400220 | RHN81020.1 | 97.292 | 480 | 13 | 0 | 1 | 480 | 60 | 539 | 0.0 | 972 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1400220 | sp|Q9FZ24|PPR4_ARATH | 43.160 | 519 | 245 | 6 | 1 | 469 | 1 | 519 | 2.21e-144 | 427 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1400220 | A0A396JRT9 | 97.292 | 480 | 13 | 0 | 1 | 480 | 60 | 539 | 0.0 | 972 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011960 | Msa1400220 | 0.854104 | 1.536530e-61 | -8.615850e-47 |
| Msa0021220 | Msa1400220 | 0.844087 | 9.393610e-59 | -8.615850e-47 |
| Msa0027770 | Msa1400220 | 0.845380 | 4.210757e-59 | -8.615850e-47 |
| Msa0030200 | Msa1400220 | 0.820520 | 6.566544e-53 | -8.615850e-47 |
| Msa0032580 | Msa1400220 | 0.800348 | 1.503302e-48 | -8.615850e-47 |
| Msa0033950 | Msa1400220 | 0.993710 | 1.159838e-201 | -8.615850e-47 |
| Msa0034030 | Msa1400220 | 0.997501 | 1.132668e-243 | -8.615850e-47 |
| Msa0037770 | Msa1400220 | 0.802869 | 4.572407e-49 | -8.615850e-47 |
| Msa0043660 | Msa1400220 | 0.855389 | 6.518799e-62 | -8.615850e-47 |
| Msa0048550 | Msa1400220 | 0.838920 | 2.159161e-57 | -8.615850e-47 |
| Msa0054440 | Msa1400220 | 0.854101 | 1.540036e-61 | -8.615850e-47 |
| Msa0054480 | Msa1400220 | 0.841380 | 4.922423e-58 | -8.615850e-47 |
| Msa0059110 | Msa1400220 | 0.802031 | 6.805025e-49 | -8.615850e-47 |
| Msa0061080 | Msa1400220 | 0.825217 | 5.287346e-54 | -8.615850e-47 |
| Msa0061630 | Msa1400220 | 0.805502 | 1.294501e-49 | -8.615850e-47 |
| Msa0063530 | Msa1400220 | 0.842443 | 2.577877e-58 | -8.615850e-47 |
| Msa0067630 | Msa1400220 | 0.816050 | 6.750954e-52 | -8.615850e-47 |
| Msa0070700 | Msa1400220 | 0.851746 | 7.261493e-61 | -8.615850e-47 |
| Msa0075500 | Msa1400220 | 0.846665 | 1.882766e-59 | -8.615850e-47 |
| Msa0091560 | Msa1400220 | 0.812858 | 3.430419e-51 | -8.615850e-47 |
| Msa0105620 | Msa1400220 | 0.848229 | 7.000893e-60 | -8.615850e-47 |
| Msa0115130 | Msa1400220 | 0.843735 | 1.166847e-58 | -8.615850e-47 |
| Msa0115400 | Msa1400220 | 0.857665 | 1.398221e-62 | -8.615850e-47 |
| Msa0118590 | Msa1400220 | 0.850831 | 1.316983e-60 | -8.615850e-47 |
| Msa1358250 | Msa1400220 | 0.852893 | 3.423062e-61 | -8.615850e-47 |
| Msa1384190 | Msa1400220 | 0.841753 | 3.924874e-58 | -8.615850e-47 |
| Msa1384880 | Msa1400220 | 0.819050 | 1.423317e-52 | -8.615850e-47 |
| Msa1392780 | Msa1400220 | 0.848933 | 4.469396e-60 | -8.615850e-47 |
| Msa1394290 | Msa1400220 | 0.816738 | 4.737794e-52 | -8.615850e-47 |
| Msa1400220 | Msa1400580 | 0.830811 | 2.379848e-55 | -8.615850e-47 |
| Msa1400220 | Msa1403420 | 0.816563 | 5.185314e-52 | -8.615850e-47 |
| Msa1400220 | Msa1411750 | 0.858958 | 5.761642e-63 | -8.615850e-47 |
| Msa1400220 | Msa1419870 | 0.869037 | 4.179713e-66 | -8.615850e-47 |
| Msa1400220 | Msa1429120 | 0.817171 | 3.787468e-52 | -8.615850e-47 |
| Msa1400220 | Msa1436520 | 0.809427 | 1.902749e-50 | -8.615850e-47 |
| Msa1400220 | Msa1437170 | 0.801412 | 9.116388e-49 | -8.615850e-47 |
| Msa1400220 | Msa1439550 | 0.826674 | 2.382576e-54 | -8.615850e-47 |
| Msa1400220 | Msa1457920 | 0.856997 | 2.202676e-62 | -8.615850e-47 |
| Msa0605000 | Msa1400220 | 0.873872 | 1.049823e-67 | -8.615850e-47 |
| Msa0610430 | Msa1400220 | 0.811181 | 7.960190e-51 | -8.615850e-47 |
| Msa0617640 | Msa1400220 | 0.813642 | 2.308026e-51 | -8.615850e-47 |
| Msa0625720 | Msa1400220 | 0.819572 | 1.082622e-52 | -8.615850e-47 |
| Msa0643060 | Msa1400220 | 0.808152 | 3.563043e-50 | -8.615850e-47 |
| Msa0648780 | Msa1400220 | 0.830998 | 2.141281e-55 | -8.615850e-47 |
| Msa0660490 | Msa1400220 | 0.836467 | 9.200633e-57 | -8.615850e-47 |
| Msa0660850 | Msa1400220 | 0.813505 | 2.474686e-51 | -8.615850e-47 |
| Msa0663390 | Msa1400220 | 0.802601 | 5.191848e-49 | -8.615850e-47 |
| Msa0685140 | Msa1400220 | 0.891177 | 5.040783e-74 | -8.615850e-47 |
| Msa0689260 | Msa1400220 | 0.851225 | 1.019337e-60 | -8.615850e-47 |
| Msa0691290 | Msa1400220 | 0.825012 | 5.912562e-54 | -8.615850e-47 |
| Msa0692830 | Msa1400220 | 0.843036 | 1.792950e-58 | -8.615850e-47 |
| Msa0692950 | Msa1400220 | 0.822640 | 2.126440e-53 | -8.615850e-47 |
| Msa0698800 | Msa1400220 | 0.801743 | 7.797507e-49 | -8.615850e-47 |
| Msa0702370 | Msa1400220 | 0.842749 | 2.137941e-58 | -8.615850e-47 |
| Msa0702550 | Msa1400220 | 0.842354 | 2.722538e-58 | -8.615850e-47 |
| Msa0709040 | Msa1400220 | 0.845291 | 4.449431e-59 | -8.615850e-47 |
| Msa0711780 | Msa1400220 | 0.871005 | 9.500219e-67 | -8.615850e-47 |
| Msa0715650 | Msa1400220 | 0.850359 | 1.787129e-60 | -8.615850e-47 |
| Msa0715700 | Msa1400220 | 0.832255 | 1.049074e-55 | -8.615850e-47 |
| Msa0719420 | Msa1400220 | 0.817956 | 2.519364e-52 | -8.615850e-47 |
| Msa0719610 | Msa1400220 | 0.815036 | 1.135706e-51 | -8.615850e-47 |
| Msa0741230 | Msa1400220 | 0.801892 | 7.266172e-49 | -8.615850e-47 |
| Msa0745740 | Msa1400220 | 0.834690 | 2.590331e-56 | -8.615850e-47 |
| Msa0754380 | Msa1400220 | 0.839980 | 1.144872e-57 | -8.615850e-47 |
| Msa0755700 | Msa1400220 | 0.804267 | 2.345174e-49 | -8.615850e-47 |
| Msa0757940 | Msa1400220 | 0.810108 | 1.357752e-50 | -8.615850e-47 |
| Msa0763330 | Msa1400220 | 0.853382 | 2.479576e-61 | -8.615850e-47 |
| Msa0772480 | Msa1400220 | 0.863500 | 2.381718e-64 | -8.615850e-47 |
| Msa0789680 | Msa1400220 | 0.821840 | 3.259467e-53 | -8.615850e-47 |
| Msa0793800 | Msa1400220 | 0.802062 | 6.705755e-49 | -8.615850e-47 |
| Msa0794670 | Msa1400220 | 0.862799 | 3.923669e-64 | -8.615850e-47 |
| Msa0795820 | Msa1400220 | 0.819147 | 1.353194e-52 | -8.615850e-47 |
| Msa0796210 | Msa1400220 | 0.826633 | 2.437401e-54 | -8.615850e-47 |
| Msa0798440 | Msa1400220 | 0.851224 | 1.019835e-60 | -8.615850e-47 |
| Msa0799260 | Msa1400220 | 0.828899 | 6.954845e-55 | -8.615850e-47 |
| Msa0799310 | Msa1400220 | 0.823325 | 1.472241e-53 | -8.615850e-47 |
| Msa0802410 | Msa1400220 | 0.826886 | 2.121077e-54 | -8.615850e-47 |
| Msa0816700 | Msa1400220 | 0.803796 | 2.938391e-49 | -8.615850e-47 |
| Msa0819480 | Msa1400220 | 0.803838 | 2.879042e-49 | -8.615850e-47 |
| Msa0830040 | Msa1400220 | 0.825044 | 5.808332e-54 | -8.615850e-47 |
| Msa0830540 | Msa1400220 | 0.869686 | 2.571178e-66 | -8.615850e-47 |
| Msa0831530 | Msa1400220 | 0.813107 | 3.025444e-51 | -8.615850e-47 |
| Msa0123360 | Msa1400220 | 0.834754 | 2.496733e-56 | -8.615850e-47 |
| Msa0127020 | Msa1400220 | 0.866721 | 2.317182e-65 | -8.615850e-47 |
| Msa0128050 | Msa1400220 | 0.935434 | 8.540449e-97 | -8.615850e-47 |
| Msa0137550 | Msa1400220 | 0.864244 | 1.398222e-64 | -8.615850e-47 |
| Msa0139350 | Msa1400220 | 0.869613 | 2.715664e-66 | -8.615850e-47 |
| Msa0141660 | Msa1400220 | 0.838619 | 2.582247e-57 | -8.615850e-47 |
| Msa0144370 | Msa1400220 | 0.859525 | 3.893381e-63 | -8.615850e-47 |
| Msa0146770 | Msa1400220 | 0.824748 | 6.822013e-54 | -8.615850e-47 |
| Msa0150820 | Msa1400220 | 0.818648 | 1.756276e-52 | -8.615850e-47 |
| Msa0159170 | Msa1400220 | 0.857456 | 1.612462e-62 | -8.615850e-47 |
| Msa0160550 | Msa1400220 | 0.811154 | 8.068108e-51 | -8.615850e-47 |
| Msa0168230 | Msa1400220 | 0.867024 | 1.855175e-65 | -8.615850e-47 |
| Msa0169280 | Msa1400220 | 0.864570 | 1.105999e-64 | -8.615850e-47 |
| Msa0170200 | Msa1400220 | 0.812738 | 3.644942e-51 | -8.615850e-47 |
| Msa0179190 | Msa1400220 | 0.819443 | 1.158212e-52 | -8.615850e-47 |
| Msa0187120 | Msa1400220 | 0.801003 | 1.105370e-48 | -8.615850e-47 |
| Msa0189300 | Msa1400220 | 0.824118 | 9.596370e-54 | -8.615850e-47 |
| Msa0220720 | Msa1400220 | 0.811575 | 6.536134e-51 | -8.615850e-47 |
| Msa0231660 | Msa1400220 | 0.814991 | 1.161909e-51 | -8.615850e-47 |
| Msa1224810 | Msa1400220 | 0.852970 | 3.254523e-61 | -8.615850e-47 |
| Msa1237630 | Msa1400220 | 0.828943 | 6.785275e-55 | -8.615850e-47 |
| Msa1237700 | Msa1400220 | 0.816842 | 4.489224e-52 | -8.615850e-47 |
| Msa1245930 | Msa1400220 | 0.830208 | 3.342335e-55 | -8.615850e-47 |
| Msa1259060 | Msa1400220 | 0.834499 | 2.893562e-56 | -8.615850e-47 |
| Msa1266990 | Msa1400220 | 0.851841 | 6.823866e-61 | -8.615850e-47 |
| Msa1275980 | Msa1400220 | 0.806760 | 7.034948e-50 | -8.615850e-47 |
| Msa1294070 | Msa1400220 | 0.809269 | 2.056653e-50 | -8.615850e-47 |
| Msa1306920 | Msa1400220 | 0.812889 | 3.377056e-51 | -8.615850e-47 |
| Msa1332590 | Msa1400220 | 0.815989 | 6.967702e-52 | -8.615850e-47 |
| Msa0383800 | Msa1400220 | 0.803230 | 3.849760e-49 | -8.615850e-47 |
| Msa0388700 | Msa1400220 | 0.872505 | 3.020391e-67 | -8.615850e-47 |
| Msa0393940 | Msa1400220 | 0.831923 | 1.267601e-55 | -8.615850e-47 |
| Msa0397070 | Msa1400220 | 0.800464 | 1.423457e-48 | -8.615850e-47 |
| Msa0397540 | Msa1400220 | 0.849883 | 2.428423e-60 | -8.615850e-47 |
| Msa0398810 | Msa1400220 | 0.827445 | 1.558723e-54 | -8.615850e-47 |
| Msa0409090 | Msa1400220 | 0.822523 | 2.263003e-53 | -8.615850e-47 |
| Msa0411430 | Msa1400220 | 0.805829 | 1.104963e-49 | -8.615850e-47 |
| Msa0422840 | Msa1400220 | 0.826023 | 3.405305e-54 | -8.615850e-47 |
| Msa0422920 | Msa1400220 | 0.828491 | 8.729186e-55 | -8.615850e-47 |
| Msa0428060 | Msa1400220 | 0.817318 | 3.509270e-52 | -8.615850e-47 |
| Msa0434180 | Msa1400220 | 0.805028 | 1.626807e-49 | -8.615850e-47 |
| Msa0437360 | Msa1400220 | 0.904673 | 9.597122e-80 | -8.615850e-47 |
| Msa0446050 | Msa1400220 | 0.807535 | 4.819657e-50 | -8.615850e-47 |
| Msa0449210 | Msa1400220 | 0.817434 | 3.304640e-52 | -8.615850e-47 |
| Msa0474400 | Msa1400220 | 0.834887 | 2.311503e-56 | -8.615850e-47 |
| Msa0481030 | Msa1400220 | 0.812802 | 3.529972e-51 | -8.615850e-47 |
| Msa0481280 | Msa1400220 | 0.829373 | 5.338687e-55 | -8.615850e-47 |
| Msa0481530 | Msa1400220 | 0.817148 | 3.832404e-52 | -8.615850e-47 |
| Msa0482130 | Msa1400220 | 0.887152 | 1.833829e-72 | -8.615850e-47 |
| Msa0987370 | Msa1400220 | 0.831984 | 1.224053e-55 | -8.615850e-47 |
| Msa0989540 | Msa1400220 | 0.826575 | 2.516231e-54 | -8.615850e-47 |
| Msa1009820 | Msa1400220 | 0.837555 | 4.850101e-57 | -8.615850e-47 |
| Msa1014730 | Msa1400220 | 0.813396 | 2.614183e-51 | -8.615850e-47 |
| Msa1051200 | Msa1400220 | 0.847993 | 8.135067e-60 | -8.615850e-47 |
| Msa1082250 | Msa1400220 | 0.815220 | 1.033371e-51 | -8.615850e-47 |
| Msa1083560 | Msa1400220 | 0.829455 | 5.097499e-55 | -8.615850e-47 |
| Msa1091940 | Msa1400220 | 0.820687 | 6.013425e-53 | -8.615850e-47 |
| Msa1097920 | Msa1400220 | 0.801748 | 7.779754e-49 | -8.615850e-47 |
| Msa0241470 | Msa1400220 | 0.820983 | 5.139755e-53 | -8.615850e-47 |
| Msa0279220 | Msa1400220 | 0.838273 | 3.170854e-57 | -8.615850e-47 |
| Msa0279240 | Msa1400220 | 0.855119 | 7.814317e-62 | -8.615850e-47 |
| Msa0309750 | Msa1400220 | 0.845976 | 2.901438e-59 | -8.615850e-47 |
| Msa0318980 | Msa1400220 | 0.836750 | 7.793880e-57 | -8.615850e-47 |
| Msa0325590 | Msa1400220 | 0.845185 | 4.753412e-59 | -8.615850e-47 |
| Msa0345350 | Msa1400220 | 0.842191 | 3.006567e-58 | -8.615850e-47 |
| Msa0345390 | Msa1400220 | 0.841041 | 6.044084e-58 | -8.615850e-47 |
| Msa0351990 | Msa1400220 | 0.823889 | 1.086321e-53 | -8.615850e-47 |
| Msa1128570 | Msa1400220 | 0.868491 | 6.278576e-66 | -8.615850e-47 |
| Msa1137700 | Msa1400220 | 0.849421 | 3.269312e-60 | -8.615850e-47 |
| Msa1144040 | Msa1400220 | 0.827895 | 1.215000e-54 | -8.615850e-47 |
| Msa1153060 | Msa1400220 | 0.863941 | 1.736718e-64 | -8.615850e-47 |
| Msa1160590 | Msa1400220 | 0.880993 | 3.470245e-70 | -8.615850e-47 |
| Msa1174470 | Msa1400220 | 0.850401 | 1.739144e-60 | -8.615850e-47 |
| Msa1179070 | Msa1400220 | 0.801276 | 9.718999e-49 | -8.615850e-47 |
| Msa1181250 | Msa1400220 | 0.879098 | 1.644503e-69 | -8.615850e-47 |
| Msa1181330 | Msa1400220 | 0.878996 | 1.786180e-69 | -8.615850e-47 |
| Msa1208880 | Msa1400220 | 0.819000 | 1.460849e-52 | -8.615850e-47 |
| Msa1209200 | Msa1400220 | 0.826215 | 3.065980e-54 | -8.615850e-47 |
| Msa1209260 | Msa1400220 | 0.870149 | 1.814454e-66 | -8.615850e-47 |
| Msa1209760 | Msa1400220 | 0.856124 | 3.976279e-62 | -8.615850e-47 |
| Msa1217470 | Msa1400220 | 0.820970 | 5.175888e-53 | -8.615850e-47 |
| Msa0486920 | Msa1400220 | 0.805476 | 1.310587e-49 | -8.615850e-47 |
| Msa0489410 | Msa1400220 | 0.843517 | 1.334732e-58 | -8.615850e-47 |
| Msa0493410 | Msa1400220 | 0.838895 | 2.191208e-57 | -8.615850e-47 |
| Msa0497490 | Msa1400220 | 0.803256 | 3.801986e-49 | -8.615850e-47 |
| Msa0500470 | Msa1400220 | 0.804652 | 1.949048e-49 | -8.615850e-47 |
| Msa0502090 | Msa1400220 | 0.820815 | 5.618707e-53 | -8.615850e-47 |
| Msa0522070 | Msa1400220 | 0.802438 | 5.610882e-49 | -8.615850e-47 |
| Msa0529830 | Msa1400220 | 0.803244 | 3.823483e-49 | -8.615850e-47 |
| Msa0529890 | Msa1400220 | 0.819564 | 1.086930e-52 | -8.615850e-47 |
| Msa0542090 | Msa1400220 | 0.901747 | 1.958895e-78 | -8.615850e-47 |
| Msa0542130 | Msa1400220 | 0.901423 | 2.719061e-78 | -8.615850e-47 |
| Msa0554290 | Msa1400220 | 0.822684 | 2.076063e-53 | -8.615850e-47 |
| Msa0555450 | Msa1400220 | 0.809322 | 2.003616e-50 | -8.615850e-47 |
| Msa0566100 | Msa1400220 | 0.857091 | 2.067441e-62 | -8.615850e-47 |
| Msa0581280 | Msa1400220 | 0.824015 | 1.014743e-53 | -8.615850e-47 |
| Msa0585510 | Msa1400220 | 0.801245 | 9.860923e-49 | -8.615850e-47 |
| Msa0585560 | Msa1400220 | 0.813453 | 2.540248e-51 | -8.615850e-47 |
| Msa0862530 | Msa1400220 | 0.825152 | 5.478528e-54 | -8.615850e-47 |
| Msa0869130 | Msa1400220 | 0.811791 | 5.866576e-51 | -8.615850e-47 |
| Msa0887250 | Msa1400220 | 0.806004 | 1.015081e-49 | -8.615850e-47 |
| Msa0909110 | Msa1400220 | 0.813647 | 2.302519e-51 | -8.615850e-47 |
| Msa0909950 | Msa1400220 | 0.815606 | 8.480115e-52 | -8.615850e-47 |
| Msa0937150 | Msa1400220 | 0.815170 | 1.060354e-51 | -8.615850e-47 |
| Msa0945440 | Msa1400220 | 0.891181 | 5.018991e-74 | -8.615850e-47 |
| Msa0964060 | Msa1400220 | 0.805139 | 1.542204e-49 | -8.615850e-47 |
| Msa0969340 | Msa1400220 | 0.808324 | 3.274680e-50 | -8.615850e-47 |
| Msa0970530 | Msa1400220 | 0.810205 | 1.293935e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1400220 | MtrunA17_Chr1g0194521 | 97.292 | 480 | 13 | 0 | 1 | 480 | 60 | 539 | 0.0 | 972 |
| Msa1400220 | MtrunA17_Chr8g0368151 | 38.377 | 456 | 265 | 7 | 40 | 480 | 29 | 483 | 1.66e-93 | 292 |
| Msa1400220 | MtrunA17_Chr2g0282091 | 30.176 | 454 | 303 | 8 | 29 | 471 | 26 | 476 | 1.77e-62 | 211 |
| Msa1400220 | MtrunA17_Chr8g0359961 | 28.846 | 416 | 293 | 3 | 30 | 442 | 32 | 447 | 6.17e-61 | 207 |
| Msa1400220 | MtrunA17_Chr1g0185601 | 30.839 | 441 | 289 | 9 | 20 | 450 | 25 | 459 | 2.07e-56 | 195 |
| Msa1400220 | MtrunA17_Chr2g0303221 | 30.189 | 424 | 280 | 8 | 13 | 430 | 19 | 432 | 3.18e-56 | 194 |
| Msa1400220 | MtrunA17_Chr4g0021331 | 30.425 | 424 | 281 | 6 | 14 | 431 | 16 | 431 | 2.40e-55 | 192 |
| Msa1400220 | MtrunA17_Chr3g0132571 | 29.252 | 441 | 295 | 8 | 20 | 450 | 26 | 459 | 7.11e-51 | 180 |
| Msa1400220 | MtrunA17_Chr2g0324251 | 27.381 | 420 | 255 | 9 | 51 | 441 | 52 | 450 | 5.56e-42 | 155 |
| Msa1400220 | MtrunA17_Chr1g0155351 | 30.241 | 291 | 199 | 4 | 46 | 332 | 69 | 359 | 1.62e-41 | 152 |
| Msa1400220 | MtrunA17_Chr8g0335951 | 32.018 | 228 | 153 | 2 | 235 | 460 | 199 | 426 | 3.12e-30 | 122 |
| Msa1400220 | MtrunA17_Chr8g0335951 | 28.082 | 292 | 170 | 8 | 9 | 264 | 46 | 333 | 3.64e-19 | 89.7 |
| Msa1400220 | MtrunA17_Chr8g0349421 | 32.653 | 196 | 131 | 1 | 251 | 445 | 3 | 198 | 1.40e-26 | 107 |
| Msa1400220 | MtrunA17_Chr7g0256181 | 23.810 | 399 | 286 | 12 | 38 | 430 | 163 | 549 | 1.68e-24 | 107 |
| Msa1400220 | MtrunA17_Chr1g0171501 | 22.931 | 423 | 306 | 12 | 29 | 445 | 139 | 547 | 2.39e-22 | 100 |
| Msa1400220 | MtrunA17_Chr2g0328121 | 23.197 | 319 | 241 | 4 | 17 | 333 | 30 | 346 | 6.32e-18 | 86.3 |
| Msa1400220 | MtrunA17_Chr8g0349431 | 40.870 | 115 | 65 | 2 | 45 | 157 | 8 | 121 | 1.43e-16 | 76.3 |
| Msa1400220 | MtrunA17_Chr8g0387281 | 22.884 | 319 | 234 | 7 | 82 | 392 | 334 | 648 | 1.71e-12 | 69.7 |
| Msa1400220 | MtrunA17_Chr7g0220481 | 29.213 | 178 | 122 | 3 | 130 | 304 | 283 | 459 | 1.20e-11 | 67.4 |
| Msa1400220 | MtrunA17_Chr8g0377751 | 22.812 | 320 | 223 | 8 | 53 | 359 | 722 | 1030 | 7.40e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1400220 | AT1G02370.1 | 43.160 | 519 | 245 | 6 | 1 | 469 | 1 | 519 | 2.25e-145 | 427 |
| Msa1400220 | AT4G01990.1 | 43.542 | 480 | 249 | 8 | 11 | 469 | 6 | 484 | 2.50e-128 | 382 |
| Msa1400220 | AT1G60770.1 | 37.069 | 464 | 271 | 10 | 33 | 480 | 25 | 483 | 1.13e-89 | 282 |
| Msa1400220 | AT1G02150.1 | 34.259 | 432 | 279 | 4 | 33 | 459 | 69 | 500 | 1.33e-76 | 249 |
| Msa1400220 | AT4G21705.1 | 31.818 | 418 | 281 | 4 | 29 | 442 | 23 | 440 | 1.46e-68 | 227 |
| Msa1400220 | AT2G20710.1 | 29.540 | 413 | 284 | 5 | 32 | 441 | 39 | 447 | 1.15e-57 | 198 |
| Msa1400220 | AT4G02820.1 | 29.895 | 475 | 305 | 9 | 8 | 470 | 41 | 499 | 4.33e-55 | 192 |
| Msa1400220 | AT5G27460.1 | 29.070 | 430 | 290 | 6 | 12 | 431 | 21 | 445 | 5.80e-53 | 186 |
| Msa1400220 | AT5G09450.1 | 31.056 | 322 | 216 | 5 | 25 | 340 | 49 | 370 | 2.66e-48 | 171 |
| Msa1400220 | AT2G20710.2 | 29.942 | 344 | 235 | 4 | 100 | 441 | 13 | 352 | 5.68e-47 | 167 |
| Msa1400220 | AT1G28020.1 | 28.267 | 329 | 231 | 5 | 36 | 359 | 41 | 369 | 3.99e-32 | 129 |
| Msa1400220 | AT1G80270.1 | 26.523 | 279 | 197 | 7 | 19 | 294 | 118 | 391 | 4.30e-24 | 105 |
| Msa1400220 | AT1G80270.3 | 26.523 | 279 | 197 | 7 | 19 | 294 | 118 | 391 | 4.30e-24 | 105 |
| Msa1400220 | AT1G80270.2 | 26.523 | 279 | 197 | 7 | 19 | 294 | 118 | 391 | 4.30e-24 | 105 |
| Msa1400220 | AT1G80270.5 | 26.523 | 279 | 197 | 7 | 19 | 294 | 118 | 391 | 4.30e-24 | 105 |
| Msa1400220 | AT1G80270.4 | 26.523 | 279 | 197 | 7 | 19 | 294 | 118 | 391 | 4.30e-24 | 105 |
| Msa1400220 | AT1G15480.1 | 25.205 | 365 | 261 | 9 | 43 | 402 | 138 | 495 | 3.97e-23 | 103 |
| Msa1400220 | AT3G15590.1 | 29.200 | 250 | 173 | 4 | 46 | 293 | 156 | 403 | 1.31e-22 | 101 |
| Msa1400220 | AT3G15590.2 | 29.200 | 250 | 173 | 4 | 46 | 293 | 156 | 403 | 1.31e-22 | 101 |
| Msa1400220 | AT1G07590.1 | 24.633 | 341 | 251 | 5 | 27 | 365 | 64 | 400 | 2.41e-19 | 91.3 |
| Msa1400220 | AT3G11380.1 | 26.780 | 295 | 180 | 6 | 66 | 355 | 78 | 341 | 8.44e-18 | 86.7 |
| Msa1400220 | AT3G11380.1 | 34.722 | 144 | 90 | 4 | 57 | 196 | 372 | 515 | 4.59e-12 | 68.6 |
| Msa1400220 | AT1G28000.1 | 24.567 | 289 | 210 | 6 | 13 | 293 | 13 | 301 | 1.30e-15 | 79.0 |
| Msa1400220 | AT5G21222.1 | 25.000 | 232 | 148 | 6 | 85 | 294 | 467 | 694 | 2.39e-12 | 70.1 |
| Msa1400220 | AT5G21222.2 | 25.000 | 232 | 148 | 6 | 85 | 294 | 467 | 694 | 2.39e-12 | 70.1 |
| Msa1400220 | AT5G21222.4 | 25.000 | 232 | 148 | 6 | 85 | 294 | 467 | 694 | 2.39e-12 | 70.1 |
| Msa1400220 | AT5G21222.3 | 25.000 | 232 | 148 | 6 | 85 | 294 | 467 | 694 | 2.39e-12 | 70.1 |
| Msa1400220 | AT5G02860.1 | 24.299 | 321 | 221 | 11 | 63 | 365 | 128 | 444 | 6.36e-11 | 65.5 |
| Msa1400220 | AT5G02860.4 | 24.299 | 321 | 221 | 11 | 63 | 365 | 128 | 444 | 6.36e-11 | 65.5 |
| Msa1400220 | AT5G02860.2 | 24.299 | 321 | 221 | 11 | 63 | 365 | 128 | 444 | 6.36e-11 | 65.5 |
| Msa1400220 | AT5G02860.5 | 24.299 | 321 | 221 | 11 | 63 | 365 | 128 | 444 | 6.36e-11 | 65.5 |
| Msa1400220 | AT5G02860.3 | 24.299 | 321 | 221 | 11 | 63 | 365 | 128 | 444 | 6.36e-11 | 65.5 |
Find 137 sgRNAs with CRISPR-Local
Find 211 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAAGGTTTGCCTTCTTATT+TGG | 0.179522 | tig0022428:+43106 | None:intergenic |
| GGGCATAATAAAATTGTTTA+AGG | 0.218164 | tig0022428:-41375 | Msa1400220:CDS |
| AATTACGGCCGTTTGATTTC+CGG | 0.228375 | tig0022428:-43181 | Msa1400220:CDS |
| TTTGATAAGATGGATGAATT+AGG | 0.262779 | tig0022428:-41881 | Msa1400220:CDS |
| GTCTACTTGTTGTTTCTTGA+AGG | 0.279974 | tig0022428:+43244 | None:intergenic |
| ATGAGTTAAGCAAGATTCTT+AGG | 0.291614 | tig0022428:-41040 | Msa1400220:CDS |
| GGCATGTTAGTTATGATTCT+AGG | 0.296691 | tig0022428:-41340 | Msa1400220:CDS |
| CCATATCATTAAGCCTTCTA+AGG | 0.308417 | tig0022428:+41399 | None:intergenic |
| TTATGCTTTCTAACCTTAGA+AGG | 0.314226 | tig0022428:-41412 | Msa1400220:CDS |
| CTTTCCCTTCGATTATATAC+TGG | 0.317101 | tig0022428:+43029 | None:intergenic |
| GCTGCAGAGGACCTTTCTTT+AGG | 0.319713 | tig0022428:-41235 | Msa1400220:CDS |
| GAAAACCAGTACTTATCTTA+AGG | 0.323675 | tig0022428:+40770 | None:intergenic |
| AGGACCTTTCTTTAGGATTC+GGG | 0.341722 | tig0022428:-41228 | Msa1400220:CDS |
| GAGGACCTTTCTTTAGGATT+CGG | 0.351526 | tig0022428:-41229 | Msa1400220:CDS |
| TAGGATTCGGGAAATGTTCA+TGG | 0.370256 | tig0022428:-41216 | Msa1400220:CDS |
| CCTTAGAAGGCTTAATGATA+TGG | 0.371817 | tig0022428:-41399 | Msa1400220:CDS |
| GGAATGTTCTTGTGGGCTTA+AGG | 0.373813 | tig0022428:-40599 | Msa1400220:three_prime_UTR |
| ACAAGAACATTCCCTCCTAT+TGG | 0.387788 | tig0022428:+40609 | None:intergenic |
| TTCTTGCTGAGCCTTTATGC+TGG | 0.387794 | tig0022428:-41515 | Msa1400220:CDS |
| CATATACATAGACATCAAAT+TGG | 0.389303 | tig0022428:+41835 | None:intergenic |
| TTTATTGGAGAAAGGTCAAT+TGG | 0.391224 | tig0022428:-41189 | Msa1400220:CDS |
| CTAGTGATGATTTGATAATC+AGG | 0.397665 | tig0022428:-40804 | Msa1400220:three_prime_UTR |
| GGAAGCTGTGTCGGTCTTTG+AGG | 0.399258 | tig0022428:-41270 | Msa1400220:CDS |
| GTTGGTTGGTGTTGCAGTGC+AGG | 0.407651 | tig0022428:-41318 | Msa1400220:CDS |
| CTCTATGATCGAACCACAGC+AGG | 0.410581 | tig0022428:+43215 | None:intergenic |
| GTTACAAATTCTCGTGGGCT+TGG | 0.417988 | tig0022428:+40919 | None:intergenic |
| TCTACTTGTTGTTTCTTGAA+GGG | 0.418981 | tig0022428:+43245 | None:intergenic |
| CTGCATGAGCTCAGTCCAAT+AGG | 0.427006 | tig0022428:-40624 | Msa1400220:three_prime_UTR |
| GAAGAAGAAACAGATCTTGA+TGG | 0.427741 | tig0022428:-41068 | Msa1400220:CDS |
| AATAAAATTGTTTAAGGAGT+GGG | 0.433563 | tig0022428:-41369 | Msa1400220:CDS |
| TGTTTAAGGAGTGGGAATCT+AGG | 0.433657 | tig0022428:-41361 | Msa1400220:CDS |
| TGGTGCTATGAGCCACTTAG+AGG | 0.441022 | tig0022428:-41165 | Msa1400220:CDS |
| CATTACCAGTCCCAGCATAA+AGG | 0.447077 | tig0022428:+41504 | None:intergenic |
| TCAGTTGGTTAATGTTATGA+AGG | 0.448455 | tig0022428:-41786 | Msa1400220:CDS |
| TCTTGCTGAGCCTTTATGCT+GGG | 0.452519 | tig0022428:-41514 | Msa1400220:CDS |
| ATGGGTGCGGTGTGTATTCA+TGG | 0.462683 | tig0022428:+40879 | None:intergenic |
| GATAGCTCCGATTGGTCACC+GGG | 0.462784 | tig0022428:+41438 | None:intergenic |
| CATAAAGGCTCAGCAAGAAA+TGG | 0.465952 | tig0022428:+41519 | None:intergenic |
| TTAAAGAGGTTTATAGAGTG+TGG | 0.469721 | tig0022428:-41481 | Msa1400220:CDS |
| ATTTGATGTCTATGTATATG+AGG | 0.470560 | tig0022428:-41832 | Msa1400220:CDS |
| CGTCTGCGACACGGTTCCTC+CGG | 0.470565 | tig0022428:+43057 | None:intergenic |
| TTTCTAGGTCGGCTAGTCTT+CGG | 0.471475 | tig0022428:+43083 | None:intergenic |
| TATTTCCTTAAGATAAGTAC+TGG | 0.471573 | tig0022428:-40775 | Msa1400220:three_prime_UTR |
| GCACTTACAGCTTGTGGTGA+AGG | 0.473435 | tig0022428:+41107 | None:intergenic |
| TGGTATTCATACAGTATTGA+AGG | 0.474569 | tig0022428:-40958 | Msa1400220:CDS |
| TATGTGTACTTGTTCTTAGC+AGG | 0.476882 | tig0022428:+41962 | None:intergenic |
| GTTTGATTTCCGGCGGAGGA+AGG | 0.482051 | tig0022428:-43171 | Msa1400220:CDS |
| AGAGACTCTGAGATGAATTA+CGG | 0.482119 | tig0022428:-43196 | Msa1400220:exon |
| TAAAGAGGTTTATAGAGTGT+GGG | 0.486756 | tig0022428:-41480 | Msa1400220:CDS |
| CTGAGCCTTTATGCTGGGAC+TGG | 0.488058 | tig0022428:-41509 | Msa1400220:CDS |
| AGTTATGATTCTAGGTTGGT+TGG | 0.491947 | tig0022428:-41332 | Msa1400220:CDS |
| ATAATCGAAGGGAAAGCCTT+AGG | 0.492451 | tig0022428:-43022 | Msa1400220:CDS |
| TTCAACCACTCCTTTCACTT+TGG | 0.493231 | tig0022428:+42015 | None:intergenic |
| TACGATACTTTCGAAGCTCC+TGG | 0.493561 | tig0022428:+42975 | None:intergenic |
| CACCGGGGTGATCTTCTTGA+GGG | 0.494822 | tig0022428:+41454 | None:intergenic |
| TGTTCTTGTGGGCTTAAGGC+AGG | 0.495189 | tig0022428:-40595 | Msa1400220:three_prime_UTR |
| TGTGCTGCTTTGAATGACCT+TGG | 0.495240 | tig0022428:-41713 | Msa1400220:CDS |
| ATGAATACCAGGAGATGATT+CGG | 0.497054 | tig0022428:+40971 | None:intergenic |
| GGCCGTTTGATTTCCGGCGG+AGG | 0.498441 | tig0022428:-43175 | Msa1400220:CDS |
| TCGGAGAAGCCTTCCTCCGC+CGG | 0.500205 | tig0022428:+43162 | None:intergenic |
| AGATCACCCCGGTGACCAAT+CGG | 0.504230 | tig0022428:-41445 | Msa1400220:CDS |
| TGAACTCGAGAGATGCGTCC+AGG | 0.504375 | tig0022428:-42993 | Msa1400220:CDS |
| GCTGCTATCTATATAAAAGC+TGG | 0.505469 | tig0022428:-41614 | Msa1400220:CDS |
| TTCCTCCGCCGGAAATCAAA+CGG | 0.507328 | tig0022428:+43173 | None:intergenic |
| GCCCACGAGAATTTGTAACT+TGG | 0.511061 | tig0022428:-40915 | Msa1400220:exon |
| GGTCGGCTAGTCTTCGGTAA+AGG | 0.515798 | tig0022428:+43089 | None:intergenic |
| TGAGGTTGAACGTGTTTATG+AGG | 0.516026 | tig0022428:-41690 | Msa1400220:CDS |
| TGTTAGTTATGATTCTAGGT+TGG | 0.519722 | tig0022428:-41336 | Msa1400220:CDS |
| ATAGGAGGGAATGTTCTTGT+GGG | 0.520788 | tig0022428:-40606 | Msa1400220:three_prime_UTR |
| AAGATGAAGACAAAATTGAC+TGG | 0.525053 | tig0022428:-41655 | Msa1400220:CDS |
| TTGTGGGCTTAAGGCAGGAT+AGG | 0.526744 | tig0022428:-40590 | Msa1400220:three_prime_UTR |
| TACTTGTTCTTAGCAGGAGG+AGG | 0.531968 | tig0022428:+41968 | None:intergenic |
| TGGGACTGGTAATGTTAAAG+AGG | 0.532622 | tig0022428:-41495 | Msa1400220:CDS |
| AGATAGCTCCGATTGGTCAC+CGG | 0.533726 | tig0022428:+41437 | None:intergenic |
| CCCACGAGAATTTGTAACTT+GGG | 0.533882 | tig0022428:-40914 | Msa1400220:exon |
| ATTTCCCGAATCCTAAAGAA+AGG | 0.537745 | tig0022428:+41224 | None:intergenic |
| TGCTTTGAATGACCTTGGTG+AGG | 0.538207 | tig0022428:-41708 | Msa1400220:CDS |
| TCACCGGGGTGATCTTCTTG+AGG | 0.539174 | tig0022428:+41453 | None:intergenic |
| TTGGAGAAAGGTCAATTGGA+TGG | 0.539563 | tig0022428:-41185 | Msa1400220:CDS |
| AGAAAAGCACTTACAGCTTG+TGG | 0.542366 | tig0022428:+41101 | None:intergenic |
| AAAGAGGTTTATAGAGTGTG+GGG | 0.547043 | tig0022428:-41479 | Msa1400220:CDS |
| GAAGCTCTCAAGAGCTGCAG+AGG | 0.547848 | tig0022428:-41248 | Msa1400220:CDS |
| AGCTGAGCTTCCAAATAAGA+AGG | 0.548369 | tig0022428:-43116 | Msa1400220:CDS |
| GATCTTGTGTCCAAAGTGAA+AGG | 0.549809 | tig0022428:-42025 | Msa1400220:CDS |
| ACTGCATCCGAATCATCTCC+TGG | 0.552993 | tig0022428:-40978 | Msa1400220:CDS |
| AGAAATGGTAAGTTTCGCGT+TGG | 0.553517 | tig0022428:+41534 | None:intergenic |
| TTACAGCTTGTGGTGAAGGT+TGG | 0.556374 | tig0022428:+41111 | None:intergenic |
| TAATAAAATTGTTTAAGGAG+TGG | 0.559489 | tig0022428:-41370 | Msa1400220:CDS |
| TTCAATACTGTATGAATACC+AGG | 0.559830 | tig0022428:+40960 | None:intergenic |
| TCCCAAGTTACAAATTCTCG+TGG | 0.560694 | tig0022428:+40913 | None:intergenic |
| TTGAACCAGTATATAATCGA+AGG | 0.561352 | tig0022428:-43034 | Msa1400220:CDS |
| ATTGGTTGCAGATAATGGAA+TGG | 0.561950 | tig0022428:-42099 | Msa1400220:intron |
| AATAGGAGGGAATGTTCTTG+TGG | 0.564209 | tig0022428:-40607 | Msa1400220:three_prime_UTR |
| AGCTGAGTTGATGCTTAAGA+AGG | 0.568467 | tig0022428:-41579 | Msa1400220:CDS |
| TGGTAAGTTTCGCGTTGGCG+CGG | 0.569478 | tig0022428:+41539 | None:intergenic |
| CTGAAAGTGCGGCCTCTAAG+TGG | 0.571070 | tig0022428:+41153 | None:intergenic |
| ATGTCTATGTATATGAGGCT+AGG | 0.571867 | tig0022428:-41827 | Msa1400220:CDS |
| TAGATTCCATCATGCATTCG+AGG | 0.573744 | tig0022428:-42954 | Msa1400220:intron |
| TTATCAAATCATCACTAGCT+CGG | 0.573776 | tig0022428:+40809 | None:intergenic |
| CATGGACAAGGAAGCTGTGT+CGG | 0.574022 | tig0022428:-41279 | Msa1400220:CDS |
| CATGAGCTCAGTCCAATAGG+AGG | 0.577937 | tig0022428:-40621 | Msa1400220:three_prime_UTR |
| CTGGTTCAACGTCTGCGACA+CGG | 0.577943 | tig0022428:+43048 | None:intergenic |
| ACCGTCGAAAGTTCCTCAGT+TGG | 0.578763 | tig0022428:-41801 | Msa1400220:CDS |
| ACGACTATGCACGGCTGCGA+CGG | 0.581337 | tig0022428:-43140 | Msa1400220:CDS |
| TAGAAGGCTTAATGATATGG+AGG | 0.581977 | tig0022428:-41396 | Msa1400220:CDS |
| GAGGCCGCACTTTCAGAAGT+CGG | 0.583270 | tig0022428:-41146 | Msa1400220:CDS |
| ACCAACTGAGGAACTTTCGA+CGG | 0.585028 | tig0022428:+41800 | None:intergenic |
| CATAATAAGATAGCTCCGAT+TGG | 0.585163 | tig0022428:+41430 | None:intergenic |
| GCGATACCTCGAATGCATGA+TGG | 0.585983 | tig0022428:+42948 | None:intergenic |
| GTGTACTTGTTCTTAGCAGG+AGG | 0.589015 | tig0022428:+41965 | None:intergenic |
| TGGTTAATGTTATGAAGGAG+AGG | 0.593769 | tig0022428:-41781 | Msa1400220:CDS |
| ATCACATGTGTATCATATGT+AGG | 0.598621 | tig0022428:-40843 | Msa1400220:three_prime_UTR |
| TTCATAACATTAACCAACTG+AGG | 0.600464 | tig0022428:+41788 | None:intergenic |
| AGAAGGCTTAATGATATGGA+GGG | 0.604451 | tig0022428:-41395 | Msa1400220:CDS |
| GCTAAGAACAAGTACACATA+CGG | 0.606065 | tig0022428:-41959 | Msa1400220:CDS |
| TCTTCTAAACTGTTACTGCA+AGG | 0.614146 | tig0022428:-41933 | Msa1400220:CDS |
| TACGGCCGTTTGATTTCCGG+CGG | 0.616646 | tig0022428:-43178 | Msa1400220:CDS |
| GGCTTACTTGAGTCAAAACA+TGG | 0.616784 | tig0022428:-41297 | Msa1400220:CDS |
| CCCAAGTTACAAATTCTCGT+GGG | 0.622015 | tig0022428:+40914 | None:intergenic |
| CTTGAGTCAAAACATGGACA+AGG | 0.623542 | tig0022428:-41291 | Msa1400220:CDS |
| AAGAGGTTTATAGAGTGTGG+GGG | 0.627275 | tig0022428:-41478 | Msa1400220:CDS |
| TGAACCAGTATATAATCGAA+GGG | 0.630767 | tig0022428:-43033 | Msa1400220:CDS |
| TCGCAGCCGTGCATAGTCGT+CGG | 0.630947 | tig0022428:+43143 | None:intergenic |
| CTAGCCGACCTAGAAAAGAC+CGG | 0.635101 | tig0022428:-43076 | Msa1400220:CDS |
| TGAGTTGATGCTTAAGAAGG+TGG | 0.644162 | tig0022428:-41576 | Msa1400220:CDS |
| ATGAGCTCAGTCCAATAGGA+GGG | 0.651102 | tig0022428:-40620 | Msa1400220:three_prime_UTR |
| TAATGGAATGGATGATGATG+AGG | 0.652324 | tig0022428:-42087 | Msa1400220:CDS |
| CAAGGAACTAATGCTAGACA+AGG | 0.652550 | tig0022428:-41915 | Msa1400220:CDS |
| GACCCTCAAGAAGATCACCC+CGG | 0.654594 | tig0022428:-41456 | Msa1400220:CDS |
| AGTAGACAAAATCCCTGCTG+TGG | 0.658513 | tig0022428:-43228 | Msa1400220:five_prime_UTR |
| ATCGCCGACTTCTGAAAGTG+CGG | 0.674194 | tig0022428:+41142 | None:intergenic |
| TCTATGATCGAACCACAGCA+GGG | 0.676707 | tig0022428:+43216 | None:intergenic |
| GCTTCTCCGACGACTATGCA+CGG | 0.690136 | tig0022428:-43149 | Msa1400220:CDS |
| GCCGACCTAGAAAAGACCGG+AGG | 0.743237 | tig0022428:-43073 | Msa1400220:CDS |
| TGTGTCCAAAGTGAAAGGAG+TGG | 0.764655 | tig0022428:-42020 | Msa1400220:CDS |
| AAACACGTTCAACCTCACCA+AGG | 0.766259 | tig0022428:+41696 | None:intergenic |
| ATAGCTCCGATTGGTCACCG+GGG | 0.806286 | tig0022428:+41439 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATAATGATGTTTTGAT+TGG | - | tig0022428:41728-41747 | Msa1400220:CDS | 15.0% |
| !! | TCAACATGAATCAAAATTTA+GGG | + | tig0022428:40945-40964 | None:intergenic | 20.0% |
| !! | TTGTTAATAAATGAATCAAC+TGG | - | tig0022428:41195-41214 | Msa1400220:CDS | 20.0% |
| !! | AGATTTAAAGATTAACAAGT+TGG | - | tig0022428:41576-41595 | Msa1400220:CDS | 20.0% |
| !! | TAATAAAATTGTTTAAGGAG+TGG | - | tig0022428:42475-42494 | Msa1400220:intron | 20.0% |
| !! | AATAAAATTGTTTAAGGAGT+GGG | - | tig0022428:42476-42495 | Msa1400220:intron | 20.0% |
| !! | TTAAAAAAGACATAAACTGT+CGG | - | tig0022428:43165-43184 | Msa1400220:CDS | 20.0% |
| !! | AAATTTAGGGTGGAAAAAAT+TGG | + | tig0022428:40932-40951 | None:intergenic | 25.0% |
| ! | CTCAACATGAATCAAAATTT+AGG | + | tig0022428:40946-40965 | None:intergenic | 25.0% |
| ! | AAAATTAGTTAGAGTCGTTT+AGG | + | tig0022428:41042-41061 | None:intergenic | 25.0% |
| ! | ACTAATTATGTTCTGTGTAA+TGG | - | tig0022428:41159-41178 | Msa1400220:CDS | 25.0% |
| ! | TTATATAGTAGTCACAAGAT+CGG | - | tig0022428:41260-41279 | Msa1400220:CDS | 25.0% |
| !!! | TTTACCATCTTTTTTACGAT+AGG | + | tig0022428:41418-41437 | None:intergenic | 25.0% |
| !! | TAAAGATTAACAAGTTGGAT+AGG | - | tig0022428:41581-41600 | Msa1400220:CDS | 25.0% |
| !! | AAAGATTAACAAGTTGGATA+GGG | - | tig0022428:41582-41601 | Msa1400220:CDS | 25.0% |
| ! | TAGTATATGATAGAACACTA+TGG | - | tig0022428:41608-41627 | Msa1400220:CDS | 25.0% |
| !! | TGAGGCAAATTAATTTTTCA+TGG | - | tig0022428:41776-41795 | Msa1400220:CDS | 25.0% |
| !! | GAGGCAAATTAATTTTTCAT+GGG | - | tig0022428:41777-41796 | Msa1400220:CDS | 25.0% |
| !!! | ATTGTCTCATTTTGATAAGA+TGG | - | tig0022428:41954-41973 | Msa1400220:CDS | 25.0% |
| ! | TTTGATAAGATGGATGAATT+AGG | - | tig0022428:41964-41983 | Msa1400220:CDS | 25.0% |
| ! | CATATACATAGACATCAAAT+TGG | + | tig0022428:42013-42032 | None:intergenic | 25.0% |
| ! | ATTTGATGTCTATGTATATG+AGG | - | tig0022428:42013-42032 | Msa1400220:CDS | 25.0% |
| !! | CTGAATTTACATACATTTTG+TGG | - | tig0022428:42100-42119 | Msa1400220:intron | 25.0% |
| ! | GGGCATAATAAAATTGTTTA+AGG | - | tig0022428:42470-42489 | Msa1400220:intron | 25.0% |
| !!! | AATGTTCATGGTGTTTTTAT+TGG | - | tig0022428:42641-42660 | Msa1400220:intron | 25.0% |
| !!! | AGTAATGCAAGTTTTAATAG+AGG | + | tig0022428:42850-42869 | None:intergenic | 25.0% |
| !!! | GTGATTGTTTTTTCAATGAT+GGG | + | tig0022428:42987-43006 | None:intergenic | 25.0% |
| !!! | TGTGATTGTTTTTTCAATGA+TGG | + | tig0022428:42988-43007 | None:intergenic | 25.0% |
| ! | TATTTCCTTAAGATAAGTAC+TGG | - | tig0022428:43070-43089 | Msa1400220:CDS | 25.0% |
| !!! | TTTCTTGAAGGGTTTTGTTA+GGG | + | tig0022428:40592-40611 | None:intergenic | 30.0% |
| !! | TCTACTTGTTGTTTCTTGAA+GGG | + | tig0022428:40603-40622 | None:intergenic | 30.0% |
| TAAAGGTTTGCCTTCTTATT+TGG | + | tig0022428:40742-40761 | None:intergenic | 30.0% | |
| TTGAACCAGTATATAATCGA+AGG | - | tig0022428:40811-40830 | Msa1400220:three_prime_UTR | 30.0% | |
| TGAACCAGTATATAATCGAA+GGG | - | tig0022428:40812-40831 | Msa1400220:three_prime_UTR | 30.0% | |
| ACATGAATCAAAATTTAGGG+TGG | + | tig0022428:40942-40961 | None:intergenic | 30.0% | |
| TGATGATAAACTATGAAGCA+TGG | + | tig0022428:41120-41139 | None:intergenic | 30.0% | |
| !! | TAATTAGTTTGCCTTGTCTA+TGG | + | tig0022428:41147-41166 | None:intergenic | 30.0% |
| !!! | CGCTTATTTTATTCTCATGT+TGG | + | tig0022428:41312-41331 | None:intergenic | 30.0% |
| ATGACAATATTAGAGAGAGT+TGG | - | tig0022428:41385-41404 | Msa1400220:CDS | 30.0% | |
| TGACAATATTAGAGAGAGTT+GGG | - | tig0022428:41386-41405 | Msa1400220:CDS | 30.0% | |
| ! | AGATGGTAAAAGTTTGACTT+AGG | - | tig0022428:41428-41447 | Msa1400220:CDS | 30.0% |
| !! | TTTTGATTGGTTGCAGATAA+TGG | - | tig0022428:41741-41760 | Msa1400220:CDS | 30.0% |
| TTCATAACATTAACCAACTG+AGG | + | tig0022428:42060-42079 | None:intergenic | 30.0% | |
| TCAGTTGGTTAATGTTATGA+AGG | - | tig0022428:42059-42078 | Msa1400220:CDS | 30.0% | |
| ! | ACATACATTTTGTGGATGAA+TGG | - | tig0022428:42108-42127 | Msa1400220:intron | 30.0% |
| AAGATGAAGACAAAATTGAC+TGG | - | tig0022428:42190-42209 | Msa1400220:intron | 30.0% | |
| ! | CTTTTATATAGATAGCAGCA+AGG | + | tig0022428:42230-42249 | None:intergenic | 30.0% |
| TTAAAGAGGTTTATAGAGTG+TGG | - | tig0022428:42364-42383 | Msa1400220:intron | 30.0% | |
| TAAAGAGGTTTATAGAGTGT+GGG | - | tig0022428:42365-42384 | Msa1400220:intron | 30.0% | |
| TTATGCTTTCTAACCTTAGA+AGG | - | tig0022428:42433-42452 | Msa1400220:intron | 30.0% | |
| TGTTAGTTATGATTCTAGGT+TGG | - | tig0022428:42509-42528 | Msa1400220:intron | 30.0% | |
| !! | ATGGTGTTTTTATTGGAGAA+AGG | - | tig0022428:42648-42667 | Msa1400220:intron | 30.0% |
| TTTATTGGAGAAAGGTCAAT+TGG | - | tig0022428:42656-42675 | Msa1400220:intron | 30.0% | |
| ATGAGTTAAGCAAGATTCTT+AGG | - | tig0022428:42805-42824 | Msa1400220:intron | 30.0% | |
| TTCAATACTGTATGAATACC+AGG | + | tig0022428:42888-42907 | None:intergenic | 30.0% | |
| ! | TGGTATTCATACAGTATTGA+AGG | - | tig0022428:42887-42906 | Msa1400220:intron | 30.0% |
| ATCACATGTGTATCATATGT+AGG | - | tig0022428:43002-43021 | Msa1400220:CDS | 30.0% | |
| TTATCAAATCATCACTAGCT+CGG | + | tig0022428:43039-43058 | None:intergenic | 30.0% | |
| ! | CTAGTGATGATTTGATAATC+AGG | - | tig0022428:43041-43060 | Msa1400220:CDS | 30.0% |
| GAAAACCAGTACTTATCTTA+AGG | + | tig0022428:43078-43097 | None:intergenic | 30.0% | |
| !!! | TCTAGTTGTTTTGTTTGCTA+TGG | - | tig0022428:43125-43144 | Msa1400220:CDS | 30.0% |
| !!! | GTTTCTTGAAGGGTTTTGTT+AGG | + | tig0022428:40593-40612 | None:intergenic | 35.0% |
| !! | GTCTACTTGTTGTTTCTTGA+AGG | + | tig0022428:40604-40623 | None:intergenic | 35.0% |
| !! | AGAGACTCTGAGATGAATTA+CGG | - | tig0022428:40649-40668 | Msa1400220:three_prime_UTR | 35.0% |
| CTTTCCCTTCGATTATATAC+TGG | + | tig0022428:40819-40838 | None:intergenic | 35.0% | |
| ATCATCACAATCCATAGACA+AGG | - | tig0022428:41133-41152 | Msa1400220:CDS | 35.0% | |
| ! | AAATGAATCAACTGGCTTAG+TGG | - | tig0022428:41203-41222 | Msa1400220:CDS | 35.0% |
| AGCACCTATCGTAAAAAAGA+TGG | - | tig0022428:41411-41430 | Msa1400220:CDS | 35.0% | |
| ! | TGGTAAAAGTTTGACTTAGG+TGG | - | tig0022428:41431-41450 | Msa1400220:CDS | 35.0% |
| ! | GACCTGTAGATTTTGTAGTA+CGG | - | tig0022428:41473-41492 | Msa1400220:CDS | 35.0% |
| ! | CAAGTCTTATCCCACTAATT+GGG | + | tig0022428:41658-41677 | None:intergenic | 35.0% |
| !! | ATTGGTTGCAGATAATGGAA+TGG | - | tig0022428:41746-41765 | Msa1400220:CDS | 35.0% |
| ! | TAATGGAATGGATGATGATG+AGG | - | tig0022428:41758-41777 | Msa1400220:CDS | 35.0% |
| TATGTGTACTTGTTCTTAGC+AGG | + | tig0022428:41886-41905 | None:intergenic | 35.0% | |
| GCTAAGAACAAGTACACATA+CGG | - | tig0022428:41886-41905 | Msa1400220:CDS | 35.0% | |
| TCTTCTAAACTGTTACTGCA+AGG | - | tig0022428:41912-41931 | Msa1400220:CDS | 35.0% | |
| ATGTCTATGTATATGAGGCT+AGG | - | tig0022428:42018-42037 | Msa1400220:CDS | 35.0% | |
| TGGTTAATGTTATGAAGGAG+AGG | - | tig0022428:42064-42083 | Msa1400220:CDS | 35.0% | |
| GCTGCTATCTATATAAAAGC+TGG | - | tig0022428:42231-42250 | Msa1400220:intron | 35.0% | |
| AAAGAGGTTTATAGAGTGTG+GGG | - | tig0022428:42366-42385 | Msa1400220:intron | 35.0% | |
| CATAATAAGATAGCTCCGAT+TGG | + | tig0022428:42418-42437 | None:intergenic | 35.0% | |
| CCATATCATTAAGCCTTCTA+AGG | + | tig0022428:42449-42468 | None:intergenic | 35.0% | |
| CCTTAGAAGGCTTAATGATA+TGG | - | tig0022428:42446-42465 | Msa1400220:intron | 35.0% | |
| TAGAAGGCTTAATGATATGG+AGG | - | tig0022428:42449-42468 | Msa1400220:intron | 35.0% | |
| AGAAGGCTTAATGATATGGA+GGG | - | tig0022428:42450-42469 | Msa1400220:intron | 35.0% | |
| GGCATGTTAGTTATGATTCT+AGG | - | tig0022428:42505-42524 | Msa1400220:intron | 35.0% | |
| !! | AGTTATGATTCTAGGTTGGT+TGG | - | tig0022428:42513-42532 | Msa1400220:intron | 35.0% |
| ATTTCCCGAATCCTAAAGAA+AGG | + | tig0022428:42624-42643 | None:intergenic | 35.0% | |
| GAAGAAGAAACAGATCTTGA+TGG | - | tig0022428:42777-42796 | Msa1400220:intron | 35.0% | |
| ATGAATACCAGGAGATGATT+CGG | + | tig0022428:42877-42896 | None:intergenic | 35.0% | |
| !!! | TGTTTTTTCAATGATGGGTG+CGG | + | tig0022428:42982-43001 | None:intergenic | 35.0% |
| AAAAAGACATAAACTGTCGG+TGG | - | tig0022428:43168-43187 | Msa1400220:CDS | 35.0% | |
| ! | AATTACGGCCGTTTGATTTC+CGG | - | tig0022428:40664-40683 | Msa1400220:three_prime_UTR | 40.0% |
| AGCTGAGCTTCCAAATAAGA+AGG | - | tig0022428:40729-40748 | Msa1400220:three_prime_UTR | 40.0% | |
| ATAATCGAAGGGAAAGCCTT+AGG | - | tig0022428:40823-40842 | Msa1400220:three_prime_UTR | 40.0% | |
| ! | CTCGAGTTCATCTTTTCCTA+AGG | + | tig0022428:40842-40861 | None:intergenic | 40.0% |
| TAGATTCCATCATGCATTCG+AGG | - | tig0022428:40891-40910 | Msa1400220:three_prime_UTR | 40.0% | |
| !! | GTAACATCGACTCTGATTGA+AGG | - | tig0022428:40981-41000 | Msa1400220:CDS | 40.0% |
| ! | TAAAGTACCACTCAAGCTGA+AGG | - | tig0022428:41232-41251 | Msa1400220:CDS | 40.0% |
| ! | AAAGTACCACTCAAGCTGAA+GGG | - | tig0022428:41233-41252 | Msa1400220:CDS | 40.0% |
| ACAAGATCGGTGATGTTGTA+TGG | - | tig0022428:41273-41292 | Msa1400220:CDS | 40.0% | |
| ! | AAGTTTGACTTAGGTGGTCT+AGG | - | tig0022428:41437-41456 | Msa1400220:CDS | 40.0% |
| CTCCGTACTACAAAATCTAC+AGG | + | tig0022428:41478-41497 | None:intergenic | 40.0% | |
| TGATTTGACTAACCTCCATC+TGG | + | tig0022428:41507-41526 | None:intergenic | 40.0% | |
| ! | GAGGTTAGTCAAATCACTTG+AGG | - | tig0022428:41511-41530 | Msa1400220:CDS | 40.0% |
| CTTATCCCACTAATTGGGAT+CGG | + | tig0022428:41653-41672 | None:intergenic | 40.0% | |
| ! | CCAAGTCTTATCCCACTAAT+TGG | + | tig0022428:41659-41678 | None:intergenic | 40.0% |
| CCAATTAGTGGGATAAGACT+TGG | - | tig0022428:41656-41675 | Msa1400220:CDS | 40.0% | |
| GATCTTGTGTCCAAAGTGAA+AGG | - | tig0022428:41820-41839 | Msa1400220:CDS | 40.0% | |
| TTCAACCACTCCTTTCACTT+TGG | + | tig0022428:41833-41852 | None:intergenic | 40.0% | |
| CAAGGAACTAATGCTAGACA+AGG | - | tig0022428:41930-41949 | Msa1400220:CDS | 40.0% | |
| TGAGGTTGAACGTGTTTATG+AGG | - | tig0022428:42155-42174 | Msa1400220:intron | 40.0% | |
| !! | AGCTGAGTTGATGCTTAAGA+AGG | - | tig0022428:42266-42285 | Msa1400220:intron | 40.0% |
| !! | TGAGTTGATGCTTAAGAAGG+TGG | - | tig0022428:42269-42288 | Msa1400220:intron | 40.0% |
| AGAAATGGTAAGTTTCGCGT+TGG | + | tig0022428:42314-42333 | None:intergenic | 40.0% | |
| CATAAAGGCTCAGCAAGAAA+TGG | + | tig0022428:42329-42348 | None:intergenic | 40.0% | |
| ! | TGGGACTGGTAATGTTAAAG+AGG | - | tig0022428:42350-42369 | Msa1400220:intron | 40.0% |
| AAGAGGTTTATAGAGTGTGG+GGG | - | tig0022428:42367-42386 | Msa1400220:intron | 40.0% | |
| TGTTTAAGGAGTGGGAATCT+AGG | - | tig0022428:42484-42503 | Msa1400220:intron | 40.0% | |
| GGCTTACTTGAGTCAAAACA+TGG | - | tig0022428:42548-42567 | Msa1400220:intron | 40.0% | |
| CTTGAGTCAAAACATGGACA+AGG | - | tig0022428:42554-42573 | Msa1400220:intron | 40.0% | |
| !! | GAGGACCTTTCTTTAGGATT+CGG | - | tig0022428:42616-42635 | Msa1400220:intron | 40.0% |
| !! | AGGACCTTTCTTTAGGATTC+GGG | - | tig0022428:42617-42636 | Msa1400220:intron | 40.0% |
| TAGGATTCGGGAAATGTTCA+TGG | - | tig0022428:42629-42648 | Msa1400220:intron | 40.0% | |
| TTGGAGAAAGGTCAATTGGA+TGG | - | tig0022428:42660-42679 | Msa1400220:intron | 40.0% | |
| !! | AGAAAAGCACTTACAGCTTG+TGG | + | tig0022428:42747-42766 | None:intergenic | 40.0% |
| CCCAAGTTACAAATTCTCGT+GGG | + | tig0022428:42934-42953 | None:intergenic | 40.0% | |
| CCCACGAGAATTTGTAACTT+GGG | - | tig0022428:42931-42950 | Msa1400220:intron | 40.0% | |
| TCCCAAGTTACAAATTCTCG+TGG | + | tig0022428:42935-42954 | None:intergenic | 40.0% | |
| ACAAGAACATTCCCTCCTAT+TGG | + | tig0022428:43239-43258 | None:intergenic | 40.0% | |
| AATAGGAGGGAATGTTCTTG+TGG | - | tig0022428:43238-43257 | Msa1400220:five_prime_UTR | 40.0% | |
| ATAGGAGGGAATGTTCTTGT+GGG | - | tig0022428:43239-43258 | Msa1400220:five_prime_UTR | 40.0% | |
| AGTAGACAAAATCCCTGCTG+TGG | - | tig0022428:40617-40636 | Msa1400220:three_prime_UTR | 45.0% | |
| TCTATGATCGAACCACAGCA+GGG | + | tig0022428:40632-40651 | None:intergenic | 45.0% | |
| !! | TTTCTAGGTCGGCTAGTCTT+CGG | + | tig0022428:40765-40784 | None:intergenic | 45.0% |
| TACGATACTTTCGAAGCTCC+TGG | + | tig0022428:40873-40892 | None:intergenic | 45.0% | |
| AATTGTCCCTTCAGCTTGAG+TGG | + | tig0022428:41242-41261 | None:intergenic | 45.0% | |
| AGGATGTTGTGTTGGATGTG+TGG | - | tig0022428:41343-41362 | Msa1400220:CDS | 45.0% | |
| AGTCAAATCACTTGAGGCAG+AGG | - | tig0022428:41517-41536 | Msa1400220:CDS | 45.0% | |
| ACTAATTGGGATCGGCTACA+TGG | + | tig0022428:41645-41664 | None:intergenic | 45.0% | |
| ATGTAGCCGATCCCAATTAG+TGG | - | tig0022428:41644-41663 | Msa1400220:CDS | 45.0% | |
| TGTAGCCGATCCCAATTAGT+GGG | - | tig0022428:41645-41664 | Msa1400220:CDS | 45.0% | |
| ! | AGTGGGATAAGACTTGGTTG+TGG | - | tig0022428:41662-41681 | Msa1400220:CDS | 45.0% |
| TGTGTCCAAAGTGAAAGGAG+TGG | - | tig0022428:41825-41844 | Msa1400220:CDS | 45.0% | |
| TACTTGTTCTTAGCAGGAGG+AGG | + | tig0022428:41880-41899 | None:intergenic | 45.0% | |
| GTGTACTTGTTCTTAGCAGG+AGG | + | tig0022428:41883-41902 | None:intergenic | 45.0% | |
| ACCAACTGAGGAACTTTCGA+CGG | + | tig0022428:42048-42067 | None:intergenic | 45.0% | |
| !! | TGTGCTGCTTTGAATGACCT+TGG | - | tig0022428:42132-42151 | Msa1400220:intron | 45.0% |
| ! | TGCTTTGAATGACCTTGGTG+AGG | - | tig0022428:42137-42156 | Msa1400220:intron | 45.0% |
| AAACACGTTCAACCTCACCA+AGG | + | tig0022428:42152-42171 | None:intergenic | 45.0% | |
| TTCTTGCTGAGCCTTTATGC+TGG | - | tig0022428:42330-42349 | Msa1400220:intron | 45.0% | |
| TCTTGCTGAGCCTTTATGCT+GGG | - | tig0022428:42331-42350 | Msa1400220:intron | 45.0% | |
| CATTACCAGTCCCAGCATAA+AGG | + | tig0022428:42344-42363 | None:intergenic | 45.0% | |
| TTACAGCTTGTGGTGAAGGT+TGG | + | tig0022428:42737-42756 | None:intergenic | 45.0% | |
| GTTACAAATTCTCGTGGGCT+TGG | + | tig0022428:42929-42948 | None:intergenic | 45.0% | |
| GCCCACGAGAATTTGTAACT+TGG | - | tig0022428:42930-42949 | Msa1400220:intron | 45.0% | |
| ATGAGCTCAGTCCAATAGGA+GGG | - | tig0022428:43225-43244 | Msa1400220:five_prime_UTR | 45.0% | |
| GGAATGTTCTTGTGGGCTTA+AGG | - | tig0022428:43246-43265 | Msa1400220:five_prime_UTR | 45.0% | |
| CTCTATGATCGAACCACAGC+AGG | + | tig0022428:40633-40652 | None:intergenic | 50.0% | |
| TTCCTCCGCCGGAAATCAAA+CGG | + | tig0022428:40675-40694 | None:intergenic | 50.0% | |
| CTAGCCGACCTAGAAAAGAC+CGG | - | tig0022428:40769-40788 | Msa1400220:three_prime_UTR | 50.0% | |
| ! | TCCTCCGGTCTTTTCTAGGT+CGG | + | tig0022428:40776-40795 | None:intergenic | 50.0% |
| GCGATACCTCGAATGCATGA+TGG | + | tig0022428:40900-40919 | None:intergenic | 50.0% | |
| GTCGTTTAGGTGTCAGACAC+CGG | + | tig0022428:41029-41048 | None:intergenic | 50.0% | |
| AAATAAGCGTAGCCGAGACG+AGG | - | tig0022428:41323-41342 | Msa1400220:CDS | 50.0% | |
| CCAACACAACATCCTCGTCT+CGG | + | tig0022428:41338-41357 | None:intergenic | 50.0% | |
| AGTACGGAGAGTAGACCAGA+TGG | - | tig0022428:41489-41508 | Msa1400220:CDS | 50.0% | |
| ACCGTCGAAAGTTCCTCAGT+TGG | - | tig0022428:42044-42063 | Msa1400220:CDS | 50.0% | |
| ! | AGATAGCTCCGATTGGTCAC+CGG | + | tig0022428:42411-42430 | None:intergenic | 50.0% |
| CATGGACAAGGAAGCTGTGT+CGG | - | tig0022428:42566-42585 | Msa1400220:intron | 50.0% | |
| GCTGCAGAGGACCTTTCTTT+AGG | - | tig0022428:42610-42629 | Msa1400220:intron | 50.0% | |
| !! | TGGTGCTATGAGCCACTTAG+AGG | - | tig0022428:42680-42699 | Msa1400220:intron | 50.0% |
| !! | ATCGCCGACTTCTGAAAGTG+CGG | + | tig0022428:42706-42725 | None:intergenic | 50.0% |
| GCACTTACAGCTTGTGGTGA+AGG | + | tig0022428:42741-42760 | None:intergenic | 50.0% | |
| ACTGCATCCGAATCATCTCC+TGG | - | tig0022428:42867-42886 | Msa1400220:intron | 50.0% | |
| ATGGGTGCGGTGTGTATTCA+TGG | + | tig0022428:42969-42988 | None:intergenic | 50.0% | |
| CTGCATGAGCTCAGTCCAAT+AGG | - | tig0022428:43221-43240 | Msa1400220:five_prime_UTR | 50.0% | |
| CATGAGCTCAGTCCAATAGG+AGG | - | tig0022428:43224-43243 | Msa1400220:five_prime_UTR | 50.0% | |
| TGTTCTTGTGGGCTTAAGGC+AGG | - | tig0022428:43250-43269 | Msa1400220:five_prime_UTR | 50.0% | |
| TTGTGGGCTTAAGGCAGGAT+AGG | - | tig0022428:43255-43274 | Msa1400220:five_prime_UTR | 50.0% | |
| ! | TACGGCCGTTTGATTTCCGG+CGG | - | tig0022428:40667-40686 | Msa1400220:three_prime_UTR | 55.0% |
| ! | GTTTGATTTCCGGCGGAGGA+AGG | - | tig0022428:40674-40693 | Msa1400220:three_prime_UTR | 55.0% |
| GCTTCTCCGACGACTATGCA+CGG | - | tig0022428:40696-40715 | Msa1400220:three_prime_UTR | 55.0% | |
| !! | GGTCGGCTAGTCTTCGGTAA+AGG | + | tig0022428:40759-40778 | None:intergenic | 55.0% |
| ! | CGGTTCCTCCGGTCTTTTCT+AGG | + | tig0022428:40780-40799 | None:intergenic | 55.0% |
| CTGGTTCAACGTCTGCGACA+CGG | + | tig0022428:40800-40819 | None:intergenic | 55.0% | |
| TGAACTCGAGAGATGCGTCC+AGG | - | tig0022428:40852-40871 | Msa1400220:three_prime_UTR | 55.0% | |
| GTTCCGTGTCCAACACTTGC+CGG | - | tig0022428:41007-41026 | Msa1400220:CDS | 55.0% | |
| !! | ACACCGGCAAGTGTTGGACA+CGG | + | tig0022428:41013-41032 | None:intergenic | 55.0% |
| TGTCAGACACCGGCAAGTGT+TGG | + | tig0022428:41019-41038 | None:intergenic | 55.0% | |
| CCGAGACGAGGATGTTGTGT+TGG | - | tig0022428:41335-41354 | Msa1400220:CDS | 55.0% | |
| ACGGAGAGTAGACCAGATGG+AGG | - | tig0022428:41492-41511 | Msa1400220:CDS | 55.0% | |
| ! | TGGTAAGTTTCGCGTTGGCG+CGG | + | tig0022428:42309-42328 | None:intergenic | 55.0% |
| CTGAGCCTTTATGCTGGGAC+TGG | - | tig0022428:42336-42355 | Msa1400220:intron | 55.0% | |
| GACCCTCAAGAAGATCACCC+CGG | - | tig0022428:42389-42408 | Msa1400220:intron | 55.0% | |
| CACCGGGGTGATCTTCTTGA+GGG | + | tig0022428:42394-42413 | None:intergenic | 55.0% | |
| TCACCGGGGTGATCTTCTTG+AGG | + | tig0022428:42395-42414 | None:intergenic | 55.0% | |
| AGATCACCCCGGTGACCAAT+CGG | - | tig0022428:42400-42419 | Msa1400220:intron | 55.0% | |
| ! | ATAGCTCCGATTGGTCACCG+GGG | + | tig0022428:42409-42428 | None:intergenic | 55.0% |
| ! | GATAGCTCCGATTGGTCACC+GGG | + | tig0022428:42410-42429 | None:intergenic | 55.0% |
| !! | GTTGGTTGGTGTTGCAGTGC+AGG | - | tig0022428:42527-42546 | Msa1400220:intron | 55.0% |
| ! | GGAAGCTGTGTCGGTCTTTG+AGG | - | tig0022428:42575-42594 | Msa1400220:intron | 55.0% |
| GAAGCTCTCAAGAGCTGCAG+AGG | - | tig0022428:42597-42616 | Msa1400220:intron | 55.0% | |
| ! | CTGAAAGTGCGGCCTCTAAG+TGG | + | tig0022428:42695-42714 | None:intergenic | 55.0% |
| GAGGCCGCACTTTCAGAAGT+CGG | - | tig0022428:42699-42718 | Msa1400220:intron | 55.0% | |
| TCGCAGCCGTGCATAGTCGT+CGG | + | tig0022428:40705-40724 | None:intergenic | 60.0% | |
| ACGACTATGCACGGCTGCGA+CGG | - | tig0022428:40705-40724 | Msa1400220:three_prime_UTR | 60.0% | |
| GCCGACCTAGAAAAGACCGG+AGG | - | tig0022428:40772-40791 | Msa1400220:three_prime_UTR | 60.0% | |
| ! | GGCCGTTTGATTTCCGGCGG+AGG | - | tig0022428:40670-40689 | Msa1400220:three_prime_UTR | 65.0% |
| TCGGAGAAGCCTTCCTCCGC+CGG | + | tig0022428:40686-40705 | None:intergenic | 65.0% | |
| CGTCTGCGACACGGTTCCTC+CGG | + | tig0022428:40791-40810 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0022428 | gene | 40586 | 43281 | 40586 | ID=Msa1400220;Name=Msa1400220 |
| tig0022428 | mRNA | 40586 | 43281 | 40586 | ID=Msa1400220-mRNA-1;Parent=Msa1400220;Name=Msa1400220-mRNA-1;_AED=0.23;_eAED=0.23;_QI=75|1|1|1|1|1|2|334|480 |
| tig0022428 | exon | 40586 | 42110 | 40586 | ID=Msa1400220-mRNA-1:exon:17674;Parent=Msa1400220-mRNA-1 |
| tig0022428 | exon | 42955 | 43281 | 42955 | ID=Msa1400220-mRNA-1:exon:17673;Parent=Msa1400220-mRNA-1 |
| tig0022428 | five_prime_UTR | 43207 | 43281 | 43207 | ID=Msa1400220-mRNA-1:five_prime_utr;Parent=Msa1400220-mRNA-1 |
| tig0022428 | CDS | 42955 | 43206 | 42955 | ID=Msa1400220-mRNA-1:cds;Parent=Msa1400220-mRNA-1 |
| tig0022428 | CDS | 40920 | 42110 | 40920 | ID=Msa1400220-mRNA-1:cds;Parent=Msa1400220-mRNA-1 |
| tig0022428 | three_prime_UTR | 40586 | 40919 | 40586 | ID=Msa1400220-mRNA-1:three_prime_utr;Parent=Msa1400220-mRNA-1 |
| Gene Sequence |
| Protein sequence |
