Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1302100 | XP_013458177.1 | 98.827 | 341 | 4 | 0 | 1 | 341 | 1 | 341 | 0.0 | 699 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1302100 | sp|P50651|RIR2A_ARATH | 78.006 | 341 | 75 | 0 | 1 | 341 | 1 | 341 | 0.0 | 567 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1302100 | A0A072USZ2 | 98.827 | 341 | 4 | 0 | 1 | 341 | 1 | 341 | 0.0 | 699 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006040 | Msa1302100 | 0.811673 | 6.224287e-51 | -8.615850e-47 |
| Msa0011960 | Msa1302100 | 0.826841 | 2.174145e-54 | -8.615850e-47 |
| Msa0012040 | Msa1302100 | 0.810189 | 1.304386e-50 | -8.615850e-47 |
| Msa0013050 | Msa1302100 | -0.862020 | 6.810830e-64 | -8.615850e-47 |
| Msa0023000 | Msa1302100 | 0.815278 | 1.003592e-51 | -8.615850e-47 |
| Msa0028660 | Msa1302100 | 0.805587 | 1.242077e-49 | -8.615850e-47 |
| Msa0032610 | Msa1302100 | 0.814131 | 1.800713e-51 | -8.615850e-47 |
| Msa0036160 | Msa1302100 | 0.857253 | 1.851358e-62 | -8.615850e-47 |
| Msa0044710 | Msa1302100 | 0.823171 | 1.598789e-53 | -8.615850e-47 |
| Msa0054750 | Msa1302100 | 0.812914 | 3.335974e-51 | -8.615850e-47 |
| Msa0067150 | Msa1302100 | 0.804775 | 1.837533e-49 | -8.615850e-47 |
| Msa0071240 | Msa1302100 | 0.816784 | 4.626673e-52 | -8.615850e-47 |
| Msa0075500 | Msa1302100 | 0.805088 | 1.580248e-49 | -8.615850e-47 |
| Msa0091570 | Msa1302100 | 0.802945 | 4.409853e-49 | -8.615850e-47 |
| Msa0105620 | Msa1302100 | 0.802261 | 6.100477e-49 | -8.615850e-47 |
| Msa0105700 | Msa1302100 | 0.807938 | 3.958711e-50 | -8.615850e-47 |
| Msa0111310 | Msa1302100 | 0.803042 | 4.209858e-49 | -8.615850e-47 |
| Msa0115270 | Msa1302100 | 0.812190 | 4.803210e-51 | -8.615850e-47 |
| Msa0119850 | Msa1302100 | 0.844419 | 7.649802e-59 | -8.615850e-47 |
| Msa0605170 | Msa1302100 | 0.808147 | 3.572417e-50 | -8.615850e-47 |
| Msa0607340 | Msa1302100 | -0.825329 | 4.974007e-54 | -8.615850e-47 |
| Msa0610430 | Msa1302100 | 0.809441 | 1.889382e-50 | -8.615850e-47 |
| Msa0618010 | Msa1302100 | 0.810316 | 1.224639e-50 | -8.615850e-47 |
| Msa0632870 | Msa1302100 | 0.850166 | 2.024133e-60 | -8.615850e-47 |
| Msa0638280 | Msa1302100 | 0.811090 | 8.331120e-51 | -8.615850e-47 |
| Msa0638320 | Msa1302100 | 0.804499 | 2.097694e-49 | -8.615850e-47 |
| Msa0647450 | Msa1302100 | -0.838721 | 2.430673e-57 | -8.615850e-47 |
| Msa0660490 | Msa1302100 | 0.832447 | 9.407030e-56 | -8.615850e-47 |
| Msa0661190 | Msa1302100 | -0.809360 | 1.966331e-50 | -8.615850e-47 |
| Msa0661210 | Msa1302100 | 0.807893 | 4.046876e-50 | -8.615850e-47 |
| Msa0671740 | Msa1302100 | 0.858716 | 6.807220e-63 | -8.615850e-47 |
| Msa0672120 | Msa1302100 | 0.807217 | 5.629035e-50 | -8.615850e-47 |
| Msa0677270 | Msa1302100 | 0.805242 | 1.467041e-49 | -8.615850e-47 |
| Msa0685140 | Msa1302100 | 0.804026 | 2.631440e-49 | -8.615850e-47 |
| Msa0692830 | Msa1302100 | 0.821177 | 4.637694e-53 | -8.615850e-47 |
| Msa0692950 | Msa1302100 | 0.806348 | 8.591590e-50 | -8.615850e-47 |
| Msa0722910 | Msa1302100 | 0.809772 | 1.603917e-50 | -8.615850e-47 |
| Msa0722920 | Msa1302100 | 0.824173 | 9.317697e-54 | -8.615850e-47 |
| Msa0723110 | Msa1302100 | 0.815232 | 1.027176e-51 | -8.615850e-47 |
| Msa0723130 | Msa1302100 | 0.826823 | 2.195392e-54 | -8.615850e-47 |
| Msa0738990 | Msa1302100 | 0.811948 | 5.422524e-51 | -8.615850e-47 |
| Msa0739680 | Msa1302100 | 0.823172 | 1.598429e-53 | -8.615850e-47 |
| Msa0756310 | Msa1302100 | 0.816736 | 4.742933e-52 | -8.615850e-47 |
| Msa0761800 | Msa1302100 | 0.809110 | 2.224903e-50 | -8.615850e-47 |
| Msa0771720 | Msa1302100 | 0.804178 | 2.447083e-49 | -8.615850e-47 |
| Msa0784860 | Msa1302100 | 0.849523 | 3.062696e-60 | -8.615850e-47 |
| Msa0795920 | Msa1302100 | 0.860194 | 2.447470e-63 | -8.615850e-47 |
| Msa0798440 | Msa1302100 | 0.806500 | 7.983030e-50 | -8.615850e-47 |
| Msa0835730 | Msa1302100 | 0.808022 | 3.797650e-50 | -8.615850e-47 |
| Msa0842210 | Msa1302100 | 0.833407 | 5.430071e-56 | -8.615850e-47 |
| Msa0145730 | Msa1302100 | 0.800138 | 1.658523e-48 | -8.615850e-47 |
| Msa0152170 | Msa1302100 | 0.811718 | 6.084505e-51 | -8.615850e-47 |
| Msa0160550 | Msa1302100 | 0.844092 | 9.366117e-59 | -8.615850e-47 |
| Msa0162770 | Msa1302100 | -0.817695 | 2.885104e-52 | -8.615850e-47 |
| Msa0168230 | Msa1302100 | 0.829433 | 5.162241e-55 | -8.615850e-47 |
| Msa0172780 | Msa1302100 | 0.813614 | 2.341873e-51 | -8.615850e-47 |
| Msa0200950 | Msa1302100 | -0.808380 | 3.186333e-50 | -8.615850e-47 |
| Msa0228070 | Msa1302100 | 0.800388 | 1.475391e-48 | -8.615850e-47 |
| Msa0238250 | Msa1302100 | -0.841666 | 4.137975e-58 | -8.615850e-47 |
| Msa1224810 | Msa1302100 | 0.842158 | 3.066605e-58 | -8.615850e-47 |
| Msa1234690 | Msa1302100 | 0.815654 | 8.275027e-52 | -8.615850e-47 |
| Msa1234730 | Msa1302100 | 0.831875 | 1.302272e-55 | -8.615850e-47 |
| Msa1260130 | Msa1302100 | 0.884981 | 1.204383e-71 | -8.615850e-47 |
| Msa1262920 | Msa1302100 | 0.961796 | 4.048703e-120 | -8.615850e-47 |
| Msa1267260 | Msa1302100 | 0.812144 | 4.914503e-51 | -8.615850e-47 |
| Msa1270960 | Msa1302100 | -0.817237 | 3.659707e-52 | -8.615850e-47 |
| Msa1279210 | Msa1302100 | 0.800525 | 1.383696e-48 | -8.615850e-47 |
| Msa1282920 | Msa1302100 | 0.810748 | 9.880496e-51 | -8.615850e-47 |
| Msa1294610 | Msa1302100 | -0.810697 | 1.013448e-50 | -8.615850e-47 |
| Msa1300050 | Msa1302100 | 0.886112 | 4.538118e-72 | -8.615850e-47 |
| Msa1302100 | Msa1302190 | -0.853994 | 1.653051e-61 | -8.615850e-47 |
| Msa1302100 | Msa1306430 | 0.803548 | 3.307925e-49 | -8.615850e-47 |
| Msa1302100 | Msa1307740 | 0.830978 | 2.165380e-55 | -8.615850e-47 |
| Msa1302100 | Msa1315110 | 0.832333 | 1.003812e-55 | -8.615850e-47 |
| Msa1302100 | Msa1322190 | 0.820671 | 6.064087e-53 | -8.615850e-47 |
| Msa1302100 | Msa1359630 | 0.820020 | 8.553300e-53 | -8.615850e-47 |
| Msa1302100 | Msa1369530 | 0.820190 | 7.820213e-53 | -8.615850e-47 |
| Msa1302100 | Msa1375340 | 0.806463 | 8.126882e-50 | -8.615850e-47 |
| Msa1302100 | Msa1387200 | 0.813044 | 3.124285e-51 | -8.615850e-47 |
| Msa1302100 | Msa1390180 | 0.818537 | 1.861463e-52 | -8.615850e-47 |
| Msa1302100 | Msa1403340 | 0.821079 | 4.885508e-53 | -8.615850e-47 |
| Msa1302100 | Msa1419970 | 0.819370 | 1.203818e-52 | -8.615850e-47 |
| Msa1302100 | Msa1427830 | 0.847284 | 1.274567e-59 | -8.615850e-47 |
| Msa1302100 | Msa1432400 | 0.818767 | 1.650389e-52 | -8.615850e-47 |
| Msa1302100 | Msa1437170 | 0.819366 | 1.206280e-52 | -8.615850e-47 |
| Msa1302100 | Msa1439530 | 0.822573 | 2.203981e-53 | -8.615850e-47 |
| Msa1302100 | Msa1440000 | 0.808817 | 2.570618e-50 | -8.615850e-47 |
| Msa1302100 | Msa1440610 | 0.803305 | 3.714433e-49 | -8.615850e-47 |
| Msa1302100 | Msa1453620 | 0.820423 | 6.914744e-53 | -8.615850e-47 |
| Msa1302100 | Msa1454110 | 0.832552 | 8.858790e-56 | -8.615850e-47 |
| Msa1302100 | Msa1455490 | 0.800198 | 1.612679e-48 | -8.615850e-47 |
| Msa1302100 | Msa1465960 | 0.855320 | 6.829631e-62 | -8.615850e-47 |
| Msa0372340 | Msa1302100 | 0.816797 | 4.595819e-52 | -8.615850e-47 |
| Msa0379410 | Msa1302100 | 0.861847 | 7.694696e-64 | -8.615850e-47 |
| Msa0380040 | Msa1302100 | 0.833361 | 5.574531e-56 | -8.615850e-47 |
| Msa0388050 | Msa1302100 | 0.838654 | 2.529253e-57 | -8.615850e-47 |
| Msa0389810 | Msa1302100 | 0.830786 | 2.413002e-55 | -8.615850e-47 |
| Msa0397540 | Msa1302100 | 0.834897 | 2.298357e-56 | -8.615850e-47 |
| Msa0399340 | Msa1302100 | 0.836536 | 8.837822e-57 | -8.615850e-47 |
| Msa0421780 | Msa1302100 | -0.811133 | 8.155196e-51 | -8.615850e-47 |
| Msa0429290 | Msa1302100 | 0.842572 | 2.383144e-58 | -8.615850e-47 |
| Msa0442200 | Msa1302100 | 0.824724 | 6.910243e-54 | -8.615850e-47 |
| Msa0446580 | Msa1302100 | 0.825146 | 5.495056e-54 | -8.615850e-47 |
| Msa0457510 | Msa1302100 | 0.800403 | 1.465331e-48 | -8.615850e-47 |
| Msa0465790 | Msa1302100 | 0.811808 | 5.818092e-51 | -8.615850e-47 |
| Msa0467960 | Msa1302100 | -0.803933 | 2.751020e-49 | -8.615850e-47 |
| Msa0468130 | Msa1302100 | 0.836856 | 7.321823e-57 | -8.615850e-47 |
| Msa0468160 | Msa1302100 | 0.812188 | 4.806685e-51 | -8.615850e-47 |
| Msa0475240 | Msa1302100 | 0.814715 | 1.337738e-51 | -8.615850e-47 |
| Msa0475580 | Msa1302100 | 0.837965 | 3.806856e-57 | -8.615850e-47 |
| Msa0982270 | Msa1302100 | 0.845818 | 3.202933e-59 | -8.615850e-47 |
| Msa0992490 | Msa1302100 | -0.804963 | 1.678663e-49 | -8.615850e-47 |
| Msa1009820 | Msa1302100 | 0.820762 | 5.780012e-53 | -8.615850e-47 |
| Msa1012660 | Msa1302100 | 0.802516 | 5.406247e-49 | -8.615850e-47 |
| Msa1012830 | Msa1302100 | 0.845025 | 5.251226e-59 | -8.615850e-47 |
| Msa1051200 | Msa1302100 | 0.844292 | 8.277104e-59 | -8.615850e-47 |
| Msa1054410 | Msa1302100 | 0.840176 | 1.018149e-57 | -8.615850e-47 |
| Msa1072460 | Msa1302100 | -0.836070 | 1.160359e-56 | -8.615850e-47 |
| Msa1097920 | Msa1302100 | 0.800759 | 1.239296e-48 | -8.615850e-47 |
| Msa0241620 | Msa1302100 | 0.808208 | 3.467583e-50 | -8.615850e-47 |
| Msa0267310 | Msa1302100 | 0.835631 | 1.499960e-56 | -8.615850e-47 |
| Msa0275680 | Msa1302100 | -0.805473 | 1.312631e-49 | -8.615850e-47 |
| Msa0279700 | Msa1302100 | 0.821485 | 3.938259e-53 | -8.615850e-47 |
| Msa0309550 | Msa1302100 | 0.816370 | 5.726752e-52 | -8.615850e-47 |
| Msa0326670 | Msa1302100 | 0.801875 | 7.324116e-49 | -8.615850e-47 |
| Msa0334570 | Msa1302100 | 0.802688 | 4.982982e-49 | -8.615850e-47 |
| Msa0338700 | Msa1302100 | -0.826110 | 3.246810e-54 | -8.615850e-47 |
| Msa0344830 | Msa1302100 | 0.814344 | 1.616484e-51 | -8.615850e-47 |
| Msa0358170 | Msa1302100 | 0.858122 | 1.022825e-62 | -8.615850e-47 |
| Msa1132890 | Msa1302100 | 0.823937 | 1.058390e-53 | -8.615850e-47 |
| Msa1136540 | Msa1302100 | 0.819993 | 8.671997e-53 | -8.615850e-47 |
| Msa1137700 | Msa1302100 | 0.825463 | 4.624172e-54 | -8.615850e-47 |
| Msa1143930 | Msa1302100 | -0.862051 | 6.661111e-64 | -8.615850e-47 |
| Msa1171870 | Msa1302100 | 0.800292 | 1.543128e-48 | -8.615850e-47 |
| Msa1174870 | Msa1302100 | 0.823596 | 1.271778e-53 | -8.615850e-47 |
| Msa1181250 | Msa1302100 | 0.802495 | 5.461046e-49 | -8.615850e-47 |
| Msa1181330 | Msa1302100 | 0.800006 | 1.764454e-48 | -8.615850e-47 |
| Msa1186950 | Msa1302100 | -0.803916 | 2.774334e-49 | -8.615850e-47 |
| Msa1187520 | Msa1302100 | 0.806997 | 6.267732e-50 | -8.615850e-47 |
| Msa1191470 | Msa1302100 | -0.813321 | 2.716191e-51 | -8.615850e-47 |
| Msa1212760 | Msa1302100 | 0.849243 | 3.664629e-60 | -8.615850e-47 |
| Msa1212980 | Msa1302100 | 0.823838 | 1.116670e-53 | -8.615850e-47 |
| Msa1217430 | Msa1302100 | -0.859895 | 3.014026e-63 | -8.615850e-47 |
| Msa1217830 | Msa1302100 | 0.807747 | 4.346941e-50 | -8.615850e-47 |
| Msa0504020 | Msa1302100 | 0.813555 | 2.412644e-51 | -8.615850e-47 |
| Msa0504450 | Msa1302100 | 0.815636 | 8.351933e-52 | -8.615850e-47 |
| Msa0519220 | Msa1302100 | 0.843078 | 1.747854e-58 | -8.615850e-47 |
| Msa0536650 | Msa1302100 | 0.836914 | 7.075238e-57 | -8.615850e-47 |
| Msa0540070 | Msa1302100 | 0.825261 | 5.161755e-54 | -8.615850e-47 |
| Msa0542090 | Msa1302100 | 0.819353 | 1.214246e-52 | -8.615850e-47 |
| Msa0542130 | Msa1302100 | 0.819210 | 1.309236e-52 | -8.615850e-47 |
| Msa0553220 | Msa1302100 | -0.852702 | 3.881643e-61 | -8.615850e-47 |
| Msa0563640 | Msa1302100 | -0.806183 | 9.309084e-50 | -8.615850e-47 |
| Msa0570330 | Msa1302100 | 0.812115 | 4.986545e-51 | -8.615850e-47 |
| Msa0580420 | Msa1302100 | 0.867006 | 1.880312e-65 | -8.615850e-47 |
| Msa0592720 | Msa1302100 | 0.829430 | 5.169582e-55 | -8.615850e-47 |
| Msa0843250 | Msa1302100 | 0.809682 | 1.676728e-50 | -8.615850e-47 |
| Msa0859380 | Msa1302100 | 0.836831 | 7.431637e-57 | -8.615850e-47 |
| Msa0870150 | Msa1302100 | 0.890584 | 8.630914e-74 | -8.615850e-47 |
| Msa0880220 | Msa1302100 | 0.800648 | 1.305785e-48 | -8.615850e-47 |
| Msa0891510 | Msa1302100 | 0.806178 | 9.329992e-50 | -8.615850e-47 |
| Msa0898860 | Msa1302100 | 0.801682 | 8.025225e-49 | -8.615850e-47 |
| Msa0903400 | Msa1302100 | 0.818857 | 1.574845e-52 | -8.615850e-47 |
| Msa0928030 | Msa1302100 | 0.807489 | 4.931411e-50 | -8.615850e-47 |
| Msa0935850 | Msa1302100 | 0.852788 | 3.669060e-61 | -8.615850e-47 |
| Msa0944550 | Msa1302100 | 0.809001 | 2.347424e-50 | -8.615850e-47 |
| Msa0949600 | Msa1302100 | 0.807661 | 4.532084e-50 | -8.615850e-47 |
| Msa0956410 | Msa1302100 | 0.824403 | 8.224371e-54 | -8.615850e-47 |
| Msa0964430 | Msa1302100 | 0.800754 | 1.242577e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1302100 | MtrunA17_Chr4g0065771 | 98.827 | 341 | 4 | 0 | 1 | 341 | 1 | 341 | 0.0 | 699 |
| Msa1302100 | MtrunA17_Chr8g0362581 | 76.852 | 324 | 71 | 1 | 18 | 341 | 6 | 325 | 0.0 | 529 |
| Msa1302100 | MtrunA17_Chr7g0225401 | 76.615 | 325 | 75 | 1 | 18 | 341 | 6 | 330 | 0.0 | 528 |
| Msa1302100 | MtrunA17_Chr1g0171221 | 76.308 | 325 | 76 | 1 | 18 | 341 | 6 | 330 | 0.0 | 528 |
| Msa1302100 | MtrunA17_Chr7g0225281 | 76.308 | 325 | 76 | 1 | 18 | 341 | 6 | 330 | 0.0 | 526 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1302100 | AT3G23580.1 | 78.006 | 341 | 75 | 0 | 1 | 341 | 1 | 341 | 0.0 | 567 |
| Msa1302100 | AT3G27060.1 | 74.618 | 327 | 80 | 2 | 18 | 341 | 6 | 332 | 8.26e-179 | 498 |
Find 84 sgRNAs with CRISPR-Local
Find 221 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTAGCTGGTATTATTAATT+AGG | 0.100138 | 8_3:-64441705 | Msa1302100:three_prime_UTR |
| GAACCCATATTGTTTGTTTA+AGG | 0.129140 | 8_3:+64444942 | None:intergenic |
| ATGAATTTGTAATGTCTTTA+TGG | 0.161576 | 8_3:-64441638 | Msa1302100:three_prime_UTR |
| TCAGCTTCTGTGCCATATTC+TGG | 0.174738 | 8_3:-64442840 | Msa1302100:intron |
| TCTTCCTTAAACAAACAATA+TGG | 0.194392 | 8_3:-64444946 | Msa1302100:exon |
| AACAAACAATATGGGTTCTT+TGG | 0.201499 | 8_3:-64444937 | Msa1302100:exon |
| AAAAGGCTGAAGCCAGTTTC+TGG | 0.208732 | 8_3:-64444797 | Msa1302100:CDS |
| AAAGCTTCAAGTATCATTAA+TGG | 0.276798 | 8_3:-64441812 | Msa1302100:three_prime_UTR |
| TGATAGGCTCGGGCATTCTA+TGG | 0.295173 | 8_3:-64443545 | Msa1302100:intron |
| ATAGAGTAACTTGGCCGTTT+TGG | 0.307198 | 8_3:+64441612 | None:intergenic |
| CTAGCTGGTATTATTAATTA+GGG | 0.309180 | 8_3:-64441704 | Msa1302100:three_prime_UTR |
| TTGCCCTTTCAGGTTTCCTT+GGG | 0.310825 | 8_3:-64442359 | Msa1302100:intron |
| TTTGCCCTTTCAGGTTTCCT+TGG | 0.319161 | 8_3:-64442360 | Msa1302100:intron |
| GGGCATTGAGTTGGATTAAC+AGG | 0.324433 | 8_3:-64443303 | Msa1302100:intron |
| TCTGAATGATGTTCAAATTC+CGG | 0.339797 | 8_3:-64443929 | Msa1302100:CDS |
| TACATCTGATGGAATCGTTT+TGG | 0.341636 | 8_3:-64443971 | Msa1302100:CDS |
| TGTGTTTGTTTCATTAGTAT+TGG | 0.347617 | 8_3:+64444870 | None:intergenic |
| AAAGTTGTTTGTAGCGAATA+GGG | 0.351905 | 8_3:+64444832 | None:intergenic |
| GCCCTCCCTTGTGCATTGAT+TGG | 0.362088 | 8_3:-64442526 | Msa1302100:CDS |
| AAGCTTCAAGTATCATTAAT+GGG | 0.363977 | 8_3:-64441811 | Msa1302100:three_prime_UTR |
| CAAAGTTGTTTGTAGCGAAT+AGG | 0.369374 | 8_3:+64444831 | None:intergenic |
| GTATGTACCGGTCCAGAAAC+TGG | 0.373363 | 8_3:+64444785 | None:intergenic |
| ATTTGTCGCTGACAGGCTAT+TGG | 0.379699 | 8_3:-64442470 | Msa1302100:intron |
| AGTTTAGCCTACACATATAT+AGG | 0.389549 | 8_3:-64441733 | Msa1302100:three_prime_UTR |
| CTTCCTTAAACAAACAATAT+GGG | 0.393126 | 8_3:-64444945 | Msa1302100:exon |
| GCAATCGAGAATATTCATTC+TGG | 0.401015 | 8_3:-64443512 | Msa1302100:intron |
| CAAAGTTCTTCCCATCATCT+TGG | 0.402459 | 8_3:+64441879 | None:intergenic |
| TATTCGCTACAAACAACTTT+GGG | 0.404981 | 8_3:-64444829 | Msa1302100:CDS |
| TCATTTGCGGAGAGACTTGT+TGG | 0.417465 | 8_3:-64443021 | Msa1302100:CDS |
| CTATTCGCTACAAACAACTT+TGG | 0.419868 | 8_3:-64444830 | Msa1302100:CDS |
| GTTGGCTTTGCATGTGTTGA+AGG | 0.420322 | 8_3:-64443003 | Msa1302100:CDS |
| ACGTGGAAAATCCCTTTGAT+TGG | 0.420885 | 8_3:-64442319 | Msa1302100:CDS |
| CTGCAGTTCCACTTCATTTG+CGG | 0.421908 | 8_3:-64443034 | Msa1302100:intron |
| ACTTTGGGAGATGTACAAAA+AGG | 0.422922 | 8_3:-64444814 | Msa1302100:CDS |
| AATATGGGTTCTTTGGAGAA+TGG | 0.450361 | 8_3:-64444930 | Msa1302100:CDS |
| TATGTATTGGCTCATAAGCT+TGG | 0.458646 | 8_3:+64442495 | None:intergenic |
| TGGGATGATGGTGATGTATT+CGG | 0.460995 | 8_3:-64441792 | Msa1302100:three_prime_UTR |
| CGATAGAAAATAGAGTAACT+TGG | 0.461578 | 8_3:+64441603 | None:intergenic |
| TGTCTTTATGGCTGCCAAAA+CGG | 0.464107 | 8_3:-64441626 | Msa1302100:three_prime_UTR |
| TCTTCCTTGTGTTGCAAGGA+AGG | 0.470108 | 8_3:-64443332 | Msa1302100:CDS |
| AGGCTGAATGGGCATTGAGT+TGG | 0.487477 | 8_3:-64443312 | Msa1302100:CDS |
| GGAAAATCCCTTTGATTGGA+TGG | 0.494213 | 8_3:-64442315 | Msa1302100:CDS |
| ACATAAAATTTGTCGCTGAC+AGG | 0.498315 | 8_3:-64442477 | Msa1302100:CDS |
| AATAAAGTCCATCCAATCAA+AGG | 0.508574 | 8_3:+64442307 | None:intergenic |
| CTCCTATGATGTACAACACT+GGG | 0.518556 | 8_3:-64444049 | Msa1302100:CDS |
| AAGTATCATTAATGGGATGA+TGG | 0.520186 | 8_3:-64441804 | Msa1302100:three_prime_UTR |
| GGAACGCCGAAGAAAATAAG+AGG | 0.521689 | 8_3:-64444909 | Msa1302100:CDS |
| AGTTCTTCCCATCATCTTGG+AGG | 0.524128 | 8_3:+64441882 | None:intergenic |
| GTTCTGTTGTTCCATGACAT+TGG | 0.532994 | 8_3:-64441662 | Msa1302100:three_prime_UTR |
| GAGACAGCTAGATTTCGAAC+GGG | 0.536560 | 8_3:-64442602 | Msa1302100:CDS |
| ATAAAGTCCATCCAATCAAA+GGG | 0.536591 | 8_3:+64442308 | None:intergenic |
| TGCCCAGTGTTGTACATCAT+AGG | 0.537246 | 8_3:+64444047 | None:intergenic |
| AAGAAGATGATAAGAAGAAG+AGG | 0.539364 | 8_3:+64444965 | None:intergenic |
| ATGTCAAGCCTCCAAGATGA+TGG | 0.539662 | 8_3:-64441890 | Msa1302100:CDS |
| AAAATCTTCCTTGTGTTGCA+AGG | 0.541514 | 8_3:-64443336 | Msa1302100:CDS |
| GTGTTGCAAGGAAGGCTGAA+TGG | 0.543120 | 8_3:-64443324 | Msa1302100:CDS |
| AAGTCTCTCCGCAAATGAAG+TGG | 0.544352 | 8_3:+64443026 | None:intergenic |
| GCCAATCAATGCACAAGGGA+GGG | 0.550023 | 8_3:+64442525 | None:intergenic |
| TGTTGCAAGGAAGGCTGAAT+GGG | 0.552298 | 8_3:-64443323 | Msa1302100:CDS |
| TTGGCTTTGCATGTGTTGAA+GGG | 0.555305 | 8_3:-64443002 | Msa1302100:CDS |
| ACAAATTCATGCCAATGTCA+TGG | 0.564753 | 8_3:+64441651 | None:intergenic |
| GTAATTACCTATATATGTGT+AGG | 0.574932 | 8_3:+64441726 | None:intergenic |
| TGAGACAGCTAGATTTCGAA+CGG | 0.575367 | 8_3:-64442603 | Msa1302100:CDS |
| ATATATAGGTAATTACTAGC+TGG | 0.580629 | 8_3:-64441719 | Msa1302100:three_prime_UTR |
| TCAGCCTTCCTTGCAACACA+AGG | 0.584139 | 8_3:+64443328 | None:intergenic |
| AGAGATGTATAGCTTGCTGT+TGG | 0.591810 | 8_3:-64443410 | Msa1302100:CDS |
| TGCCAATCAATGCACAAGGG+AGG | 0.592084 | 8_3:+64442524 | None:intergenic |
| TCTCCTATGATGTACAACAC+TGG | 0.592747 | 8_3:-64444050 | Msa1302100:CDS |
| TGCCCTTTCAGGTTTCCTTG+GGG | 0.594621 | 8_3:-64442358 | Msa1302100:intron |
| AAGTTGGTTGACAGCTGAAG+AGG | 0.595614 | 8_3:-64444079 | Msa1302100:intron |
| GCTGAAGCCAGTTTCTGGAC+CGG | 0.596341 | 8_3:-64444792 | Msa1302100:intron |
| AACATGATTGAGCAGAGGAA+AGG | 0.603731 | 8_3:-64441960 | Msa1302100:intron |
| TGTCAAGCCTCCAAGATGAT+GGG | 0.607267 | 8_3:-64441889 | Msa1302100:CDS |
| TTCATGCCAATCAATGCACA+AGG | 0.618751 | 8_3:+64442520 | None:intergenic |
| TATGAAGTGCTTCTCAGAGT+CGG | 0.621934 | 8_3:+64444017 | None:intergenic |
| AAGGGTGGGTGATTATCAGA+AGG | 0.633466 | 8_3:-64441921 | Msa1302100:CDS |
| GTGCTTCTCAGAGTCGGACA+AGG | 0.636420 | 8_3:+64444023 | None:intergenic |
| GAGGGCATCACAGACAAACT+CGG | 0.641352 | 8_3:+64442543 | None:intergenic |
| TCATTTGAGAATGTCAGACC+CGG | 0.642175 | 8_3:+64442796 | None:intergenic |
| GAATGATGTTCAAATTCCGG+AGG | 0.652575 | 8_3:-64443926 | Msa1302100:intron |
| GAGCTAATCTCTAGAGACGA+GGG | 0.653908 | 8_3:-64442775 | Msa1302100:CDS |
| TGAGCTAATCTCTAGAGACG+AGG | 0.689131 | 8_3:-64442776 | Msa1302100:CDS |
| TACTAATGAAACAAACACAG+AGG | 0.751367 | 8_3:-64444866 | Msa1302100:CDS |
| TCATGCCAATCAATGCACAA+GGG | 0.758595 | 8_3:+64442521 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAAATTAAATTGTTGTT+TGG | + | chr8_3:64442003-64442022 | None:intergenic | 10.0% |
| !! | GTAATTAAATCATATTAAAT+TGG | - | chr8_3:64442034-64442053 | Msa1302100:intron | 10.0% |
| !! | AATTGATTATATTTATTGAT+AGG | - | chr8_3:64443012-64443031 | Msa1302100:CDS | 10.0% |
| !! | TTATTAAAATTGAATGATCA+AGG | + | chr8_3:64442471-64442490 | None:intergenic | 15.0% |
| !!! | TTATGTTAATTCTTCTTTTA+AGG | - | chr8_3:64442825-64442844 | Msa1302100:CDS | 15.0% |
| !!! | TAATGTTTTGATATTAGTTT+TGG | - | chr8_3:64443910-64443929 | Msa1302100:intron | 15.0% |
| !! | AAAAGAAAAAATGTATGTAC+CGG | + | chr8_3:64441803-64441822 | None:intergenic | 20.0% |
| !! | AATAGTACAAAATTGAAGTT+TGG | + | chr8_3:64441889-64441908 | None:intergenic | 20.0% |
| !!! | TTTTGAATGTATTTTGAAGA+TGG | - | chr8_3:64442292-64442311 | Msa1302100:intron | 20.0% |
| !!! | TCAATTTTAATAACTGAAGT+TGG | - | chr8_3:64442478-64442497 | Msa1302100:CDS | 20.0% |
| !!! | TTAATTTTCGTAGTACTTTT+TGG | - | chr8_3:64442854-64442873 | Msa1302100:intron | 20.0% |
| !! | ATTATATTTATTGATAGGCT+CGG | - | chr8_3:64443017-64443036 | Msa1302100:CDS | 20.0% |
| !! | AATTTGTAATAGTAAAAGTC+TGG | - | chr8_3:64443345-64443364 | Msa1302100:CDS | 20.0% |
| !!! | AACTTTTGAAAAAGAAACAA+GGG | + | chr8_3:64443652-64443671 | None:intergenic | 20.0% |
| !!! | ACTTTTTCATTCATTAGTTT+TGG | - | chr8_3:64443868-64443887 | Msa1302100:intron | 20.0% |
| !!! | TCTTGAAAAAATATTGACTT+AGG | - | chr8_3:64444351-64444370 | Msa1302100:intron | 20.0% |
| !! | ATGAATTTGTAATGTCTTTA+TGG | - | chr8_3:64444935-64444954 | Msa1302100:exon | 20.0% |
| ! | TCTTCCTTAAACAAACAATA+TGG | - | chr8_3:64441627-64441646 | Msa1302100:three_prime_UTR | 25.0% |
| ! | CTTCCTTAAACAAACAATAT+GGG | - | chr8_3:64441628-64441647 | Msa1302100:three_prime_UTR | 25.0% |
| ! | TGTGTTTGTTTCATTAGTAT+TGG | + | chr8_3:64441706-64441725 | None:intergenic | 25.0% |
| !! | GAAAAATAATGGAAAAACAG+AGG | + | chr8_3:64441839-64441858 | None:intergenic | 25.0% |
| ! | TAGATGACAGAGAAAAATAA+TGG | + | chr8_3:64441850-64441869 | None:intergenic | 25.0% |
| !! | ATTTTATTCATCCCTTTCTT+TGG | - | chr8_3:64441906-64441925 | Msa1302100:CDS | 25.0% |
| !! | TGAGATATTTTCCAAAGAAA+GGG | + | chr8_3:64441920-64441939 | None:intergenic | 25.0% |
| !! | TTGAGATATTTTCCAAAGAA+AGG | + | chr8_3:64441921-64441940 | None:intergenic | 25.0% |
| !! | TATTAAATTGGTTTCTCTGA+AGG | - | chr8_3:64442046-64442065 | Msa1302100:intron | 25.0% |
| !! | TTTTTGTTAGAACAACAATC+TGG | - | chr8_3:64442126-64442145 | Msa1302100:intron | 25.0% |
| !! | AATTTTCAGTGAAAGATTAG+AGG | - | chr8_3:64442240-64442259 | Msa1302100:intron | 25.0% |
| ! | TCAATTATAGTTTCCAAAAG+TGG | + | chr8_3:64442404-64442423 | None:intergenic | 25.0% |
| ! | ATTGAATGATCAAGGTAAAA+AGG | + | chr8_3:64442463-64442482 | None:intergenic | 25.0% |
| ! | AAGTAGTATGTGAAACTAAT+CGG | + | chr8_3:64442735-64442754 | None:intergenic | 25.0% |
| !!! | GTTAATTCTTCTTTTAAGGA+TGG | - | chr8_3:64442829-64442848 | Msa1302100:CDS | 25.0% |
| !!! | TCTTTGGTTTTATTCATATG+TGG | - | chr8_3:64442962-64442981 | Msa1302100:intron | 25.0% |
| ! | AATTGTTAAAAAGTTAACCC+AGG | + | chr8_3:64442996-64443015 | None:intergenic | 25.0% |
| ! | TTATATTTATTGATAGGCTC+GGG | - | chr8_3:64443018-64443037 | Msa1302100:CDS | 25.0% |
| ! | GAAATATTATGATAAGGAAG+AGG | + | chr8_3:64443110-64443129 | None:intergenic | 25.0% |
| ! | CAAAAATAAAACCACAAATC+AGG | + | chr8_3:64443141-64443160 | None:intergenic | 25.0% |
| ! | TTACTATTACAAATTGCAAC+AGG | + | chr8_3:64443340-64443359 | None:intergenic | 25.0% |
| !!! | TCAATTTTTGGTACATGATA+GGG | + | chr8_3:64443371-64443390 | None:intergenic | 25.0% |
| !!! | ATCAATTTTTGGTACATGAT+AGG | + | chr8_3:64443372-64443391 | None:intergenic | 25.0% |
| ! | ATCATGTACCAAAAATTGAT+TGG | - | chr8_3:64443372-64443391 | Msa1302100:CDS | 25.0% |
| !!! | CAAAAATTGATTGGTTTGAT+GGG | - | chr8_3:64443381-64443400 | Msa1302100:CDS | 25.0% |
| !!! | ATTTATCATTTTTGCCTTTC+TGG | + | chr8_3:64443439-64443458 | None:intergenic | 25.0% |
| ! | AAGGCAAAAATGATAAATCT+CGG | - | chr8_3:64443441-64443460 | Msa1302100:intron | 25.0% |
| !! | TTAGTGCAGTTATCTTTTAA+AGG | - | chr8_3:64443473-64443492 | Msa1302100:intron | 25.0% |
| !! | TAGTGCAGTTATCTTTTAAA+GGG | - | chr8_3:64443474-64443493 | Msa1302100:intron | 25.0% |
| !!! | CAACTTTTGAAAAAGAAACA+AGG | + | chr8_3:64443653-64443672 | None:intergenic | 25.0% |
| ! | CAAACCATAATTGAAAAGAA+GGG | + | chr8_3:64443710-64443729 | None:intergenic | 25.0% |
| !!! | ATTAGTTTTGGATGATTCAA+TGG | - | chr8_3:64443922-64443941 | Msa1302100:intron | 25.0% |
| !! | TTTCCACGTTGTAAATTTTT+AGG | + | chr8_3:64444243-64444262 | None:intergenic | 25.0% |
| ! | TATCCAATCACATAATACAA+TGG | - | chr8_3:64444576-64444595 | Msa1302100:intron | 25.0% |
| ! | AAAGCTTCAAGTATCATTAA+TGG | - | chr8_3:64444761-64444780 | Msa1302100:intron | 25.0% |
| ! | AAGCTTCAAGTATCATTAAT+GGG | - | chr8_3:64444762-64444781 | Msa1302100:intron | 25.0% |
| ! | GTAATTACCTATATATGTGT+AGG | + | chr8_3:64444850-64444869 | None:intergenic | 25.0% |
| ! | ATATATAGGTAATTACTAGC+TGG | - | chr8_3:64444854-64444873 | Msa1302100:CDS | 25.0% |
| ! | ACTAGCTGGTATTATTAATT+AGG | - | chr8_3:64444868-64444887 | Msa1302100:CDS | 25.0% |
| ! | CTAGCTGGTATTATTAATTA+GGG | - | chr8_3:64444869-64444888 | Msa1302100:CDS | 25.0% |
| AAGAAGATGATAAGAAGAAG+AGG | + | chr8_3:64441611-64441630 | None:intergenic | 30.0% | |
| GAACCCATATTGTTTGTTTA+AGG | + | chr8_3:64441634-64441653 | None:intergenic | 30.0% | |
| AACAAACAATATGGGTTCTT+TGG | - | chr8_3:64441636-64441655 | Msa1302100:three_prime_UTR | 30.0% | |
| !!! | TCTTCTCCTCTTATTTTCTT+CGG | + | chr8_3:64441673-64441692 | None:intergenic | 30.0% |
| TACTAATGAAACAAACACAG+AGG | - | chr8_3:64441707-64441726 | Msa1302100:three_prime_UTR | 30.0% | |
| AAAGTTGTTTGTAGCGAATA+GGG | + | chr8_3:64441744-64441763 | None:intergenic | 30.0% | |
| TATTCGCTACAAACAACTTT+GGG | - | chr8_3:64441744-64441763 | Msa1302100:three_prime_UTR | 30.0% | |
| ! | AGAGACACTAATTTGTGTAA+AGG | + | chr8_3:64442079-64442098 | None:intergenic | 30.0% |
| TTTGATGAGATTCTGATGAA+TGG | - | chr8_3:64442328-64442347 | Msa1302100:CDS | 30.0% | |
| TCTGAATGATGTTCAAATTC+CGG | - | chr8_3:64442644-64442663 | Msa1302100:intron | 30.0% | |
| GAAACTAATCGGTAAATTGA+GGG | + | chr8_3:64442724-64442743 | None:intergenic | 30.0% | |
| TGAAACTAATCGGTAAATTG+AGG | + | chr8_3:64442725-64442744 | None:intergenic | 30.0% | |
| TTAACATAAAGTACAGCCTA+AGG | + | chr8_3:64442814-64442833 | None:intergenic | 30.0% | |
| ! | AAAGACAAGGTGCTAAAATA+AGG | + | chr8_3:64442903-64442922 | None:intergenic | 30.0% |
| GAACAAACAATCAAAAGACA+AGG | + | chr8_3:64442916-64442935 | None:intergenic | 30.0% | |
| CAAAACAAAATCACAACTCT+AGG | + | chr8_3:64442938-64442957 | None:intergenic | 30.0% | |
| !!! | GATTTTGTTTTGCTTCTCTT+TGG | - | chr8_3:64442946-64442965 | Msa1302100:intron | 30.0% |
| ATATTATGATAAGGAAGAGG+AGG | + | chr8_3:64443107-64443126 | None:intergenic | 30.0% | |
| AGGGGAGAAATATTATGATA+AGG | + | chr8_3:64443116-64443135 | None:intergenic | 30.0% | |
| ! | CCATCAAACCAATCAATTTT+TGG | + | chr8_3:64443383-64443402 | None:intergenic | 30.0% |
| !! | CCAAAAATTGATTGGTTTGA+TGG | - | chr8_3:64443380-64443399 | Msa1302100:CDS | 30.0% |
| TAATAGCTTCTCATAATGCA+TGG | - | chr8_3:64443515-64443534 | Msa1302100:CDS | 30.0% | |
| AATAGCTTCTCATAATGCAT+GGG | - | chr8_3:64443516-64443535 | Msa1302100:CDS | 30.0% | |
| GGCAAACTAGTTAAGTAAAT+AGG | + | chr8_3:64443689-64443708 | None:intergenic | 30.0% | |
| ! | TTTGCCCTTCTTTTCAATTA+TGG | - | chr8_3:64443703-64443722 | Msa1302100:intron | 30.0% |
| GCAAACCATAATTGAAAAGA+AGG | + | chr8_3:64443711-64443730 | None:intergenic | 30.0% | |
| !! | TCTCTTTTTAAGCCAGAATA+TGG | + | chr8_3:64443748-64443767 | None:intergenic | 30.0% |
| !! | ATATTCTGGCTTAAAAAGAG+AGG | - | chr8_3:64443747-64443766 | Msa1302100:intron | 30.0% |
| TAAAAAGAGAGGATTAATGC+CGG | - | chr8_3:64443758-64443777 | Msa1302100:intron | 30.0% | |
| ! | CAGCGACAAATTTTATGTAT+TGG | + | chr8_3:64444094-64444113 | None:intergenic | 30.0% |
| ! | AAAATGTTTTCGTTTTGCCT+TGG | - | chr8_3:64444135-64444154 | Msa1302100:intron | 30.0% |
| TTATAATTCCCATGTTACCA+AGG | + | chr8_3:64444155-64444174 | None:intergenic | 30.0% | |
| ATAAAGTCCATCCAATCAAA+GGG | + | chr8_3:64444268-64444287 | None:intergenic | 30.0% | |
| AATAAAGTCCATCCAATCAA+AGG | + | chr8_3:64444269-64444288 | None:intergenic | 30.0% | |
| ! | AACAGATGTAGTGGAATAAA+TGG | + | chr8_3:64444324-64444343 | None:intergenic | 30.0% |
| GAATGATAAAACAGATGTAG+TGG | + | chr8_3:64444333-64444352 | None:intergenic | 30.0% | |
| GTGTTTGTATCATGAAATAC+AGG | + | chr8_3:64444382-64444401 | None:intergenic | 30.0% | |
| AAGCCATTGTATTATGTGAT+TGG | + | chr8_3:64444582-64444601 | None:intergenic | 30.0% | |
| AAGTATCATTAATGGGATGA+TGG | - | chr8_3:64444769-64444788 | Msa1302100:intron | 30.0% | |
| AGTTTAGCCTACACATATAT+AGG | - | chr8_3:64444840-64444859 | Msa1302100:CDS | 30.0% | |
| CGATAGAAAATAGAGTAACT+TGG | + | chr8_3:64444973-64444992 | None:intergenic | 30.0% | |
| ! | AATATGGGTTCTTTGGAGAA+TGG | - | chr8_3:64441643-64441662 | Msa1302100:three_prime_UTR | 35.0% |
| CAAAGTTGTTTGTAGCGAAT+AGG | + | chr8_3:64441745-64441764 | None:intergenic | 35.0% | |
| CTATTCGCTACAAACAACTT+TGG | - | chr8_3:64441743-64441762 | Msa1302100:three_prime_UTR | 35.0% | |
| ! | ACTTTGGGAGATGTACAAAA+AGG | - | chr8_3:64441759-64441778 | Msa1302100:three_prime_UTR | 35.0% |
| GACAATGAACACATGATGTT+TGG | - | chr8_3:64442178-64442197 | Msa1302100:intron | 35.0% | |
| GTGAAAGATTAGAGGATTTC+CGG | - | chr8_3:64442248-64442267 | Msa1302100:intron | 35.0% | |
| TTATAGTTTCCAAAAGTGGC+TGG | + | chr8_3:64442400-64442419 | None:intergenic | 35.0% | |
| TCCATCAGATGTAGCAAAAA+AGG | + | chr8_3:64442595-64442614 | None:intergenic | 35.0% | |
| ! | TACATCTGATGGAATCGTTT+TGG | - | chr8_3:64442602-64442621 | Msa1302100:CDS | 35.0% |
| !!! | TGGAATCGTTTTGGAGAATT+TGG | - | chr8_3:64442611-64442630 | Msa1302100:CDS | 35.0% |
| AATGCTTAAAACACTACCTC+CGG | + | chr8_3:64442666-64442685 | None:intergenic | 35.0% | |
| GTTTCACATACTACTTGCTT+TGG | - | chr8_3:64442739-64442758 | Msa1302100:intron | 35.0% | |
| ATAAATTGAAGACTGAGCAG+TGG | - | chr8_3:64442772-64442791 | Msa1302100:CDS | 35.0% | |
| AATCTGATGTTGTACACCTT+AGG | - | chr8_3:64442795-64442814 | Msa1302100:CDS | 35.0% | |
| GCAATCGAGAATATTCATTC+TGG | - | chr8_3:64443061-64443080 | Msa1302100:intron | 35.0% | |
| TAAAACCACAAATCAGGCAA+GGG | + | chr8_3:64443135-64443154 | None:intergenic | 35.0% | |
| ATAAAACCACAAATCAGGCA+AGG | + | chr8_3:64443136-64443155 | None:intergenic | 35.0% | |
| AAAATCTTCCTTGTGTTGCA+AGG | - | chr8_3:64443237-64443256 | Msa1302100:intron | 35.0% | |
| CTATGAATAAACTGCCAAGT+AGG | - | chr8_3:64443314-64443333 | Msa1302100:CDS | 35.0% | |
| ! | GTTGAAGGGATATTTTTCTC+AGG | - | chr8_3:64443585-64443604 | Msa1302100:intron | 35.0% |
| ! | AAGGGATATTTTTCTCAGGA+AGG | - | chr8_3:64443589-64443608 | Msa1302100:intron | 35.0% |
| AAAAAGAGAGGATTAATGCC+GGG | - | chr8_3:64443759-64443778 | Msa1302100:intron | 35.0% | |
| ! | ATTTTGCTTGCATGCTATAC+AGG | - | chr8_3:64443832-64443851 | Msa1302100:intron | 35.0% |
| CATGCTATACAGGTAGTATT+TGG | - | chr8_3:64443842-64443861 | Msa1302100:intron | 35.0% | |
| !! | GTTTTGGATGACGTTGTATA+AGG | - | chr8_3:64443884-64443903 | Msa1302100:intron | 35.0% |
| !! | TATGTATTGGCTCATAAGCT+TGG | + | chr8_3:64444081-64444100 | None:intergenic | 35.0% |
| ACATAAAATTTGTCGCTGAC+AGG | - | chr8_3:64444096-64444115 | Msa1302100:intron | 35.0% | |
| ATAAGTTCTTCTCCCAAGAT+TGG | - | chr8_3:64444171-64444190 | Msa1302100:intron | 35.0% | |
| AAAGGGCAAAAAAGAAAAGC+GGG | + | chr8_3:64444203-64444222 | None:intergenic | 35.0% | |
| GAAAGGGCAAAAAAGAAAAG+CGG | + | chr8_3:64444204-64444223 | None:intergenic | 35.0% | |
| !! | CTTTTCTTTTTTGCCCTTTC+AGG | - | chr8_3:64444204-64444223 | Msa1302100:intron | 35.0% |
| GTGCCTAAAAATTTACAACG+TGG | - | chr8_3:64444237-64444256 | Msa1302100:intron | 35.0% | |
| !!! | AACTTTTTTGAGAGAAGGGT+GGG | - | chr8_3:64444638-64444657 | Msa1302100:intron | 35.0% |
| !!! | CTTTGTTTTCAAGCTTGATG+AGG | - | chr8_3:64444712-64444731 | Msa1302100:intron | 35.0% |
| ACAAATTCATGCCAATGTCA+TGG | + | chr8_3:64444925-64444944 | None:intergenic | 35.0% | |
| TTCAAAAGACACTCTGCAGT+CGG | + | chr8_3:64442222-64442241 | None:intergenic | 40.0% | |
| !! | CATGTGTTCAAGTTGTACAC+CGG | + | chr8_3:64442270-64442289 | None:intergenic | 40.0% |
| TCTCCTATGATGTACAACAC+TGG | - | chr8_3:64442523-64442542 | Msa1302100:CDS | 40.0% | |
| CTCCTATGATGTACAACACT+GGG | - | chr8_3:64442524-64442543 | Msa1302100:CDS | 40.0% | |
| ! | TATGAAGTGCTTCTCAGAGT+CGG | + | chr8_3:64442559-64442578 | None:intergenic | 40.0% |
| CAGATGTAGCAAAAAAGGCA+AGG | + | chr8_3:64442590-64442609 | None:intergenic | 40.0% | |
| !!! | GCCTTTTTTGCTACATCTGA+TGG | - | chr8_3:64442591-64442610 | Msa1302100:CDS | 40.0% |
| !! | TTTTGGAGAATTTGGCTGCA+AGG | - | chr8_3:64442619-64442638 | Msa1302100:intron | 40.0% |
| GAATGATGTTCAAATTCCGG+AGG | - | chr8_3:64442647-64442666 | Msa1302100:intron | 40.0% | |
| AAAACCACAAATCAGGCAAG+GGG | + | chr8_3:64443134-64443153 | None:intergenic | 40.0% | |
| !! | AGAGATGTATAGCTTGCTGT+TGG | - | chr8_3:64443163-64443182 | Msa1302100:intron | 40.0% |
| AATGATAAATCTCGGCGTTC+TGG | - | chr8_3:64443449-64443468 | Msa1302100:intron | 40.0% | |
| !! | TTGGCTTTGCATGTGTTGAA+GGG | - | chr8_3:64443571-64443590 | Msa1302100:intron | 40.0% |
| TCATTTGAGAATGTCAGACC+CGG | + | chr8_3:64443780-64443799 | None:intergenic | 40.0% | |
| TGAGACAGCTAGATTTCGAA+CGG | - | chr8_3:64443970-64443989 | Msa1302100:CDS | 40.0% | |
| TCATGCCAATCAATGCACAA+GGG | + | chr8_3:64444055-64444074 | None:intergenic | 40.0% | |
| TTCATGCCAATCAATGCACA+AGG | + | chr8_3:64444056-64444075 | None:intergenic | 40.0% | |
| !! | TTCGTTTTGCCTTGGTAACA+TGG | - | chr8_3:64444143-64444162 | Msa1302100:intron | 40.0% |
| !! | TCGTTTTGCCTTGGTAACAT+GGG | - | chr8_3:64444144-64444163 | Msa1302100:intron | 40.0% |
| !! | GTAAATTTTTAGGCACCCCA+AGG | + | chr8_3:64444233-64444252 | None:intergenic | 40.0% |
| ACGTGGAAAATCCCTTTGAT+TGG | - | chr8_3:64444254-64444273 | Msa1302100:intron | 40.0% | |
| GGAAAATCCCTTTGATTGGA+TGG | - | chr8_3:64444258-64444277 | Msa1302100:intron | 40.0% | |
| TATGCAACATGATTGAGCAG+AGG | - | chr8_3:64444608-64444627 | Msa1302100:intron | 40.0% | |
| AACATGATTGAGCAGAGGAA+AGG | - | chr8_3:64444613-64444632 | Msa1302100:intron | 40.0% | |
| !!! | AGGCCAACTTTTTTGAGAGA+AGG | - | chr8_3:64444633-64444652 | Msa1302100:intron | 40.0% |
| !!! | GGCCAACTTTTTTGAGAGAA+GGG | - | chr8_3:64444634-64444653 | Msa1302100:intron | 40.0% |
| CACCCTTCTCTCAAAAAAGT+TGG | + | chr8_3:64444639-64444658 | None:intergenic | 40.0% | |
| !!! | CAACTTTTTTGAGAGAAGGG+TGG | - | chr8_3:64444637-64444656 | Msa1302100:intron | 40.0% |
| CAAAGTTCTTCCCATCATCT+TGG | + | chr8_3:64444697-64444716 | None:intergenic | 40.0% | |
| ! | TGGGATGATGGTGATGTATT+CGG | - | chr8_3:64444781-64444800 | Msa1302100:intron | 40.0% |
| GTTCTGTTGTTCCATGACAT+TGG | - | chr8_3:64444911-64444930 | Msa1302100:CDS | 40.0% | |
| TGTCTTTATGGCTGCCAAAA+CGG | - | chr8_3:64444947-64444966 | Msa1302100:exon | 40.0% | |
| ! | ATAGAGTAACTTGGCCGTTT+TGG | + | chr8_3:64444964-64444983 | None:intergenic | 40.0% |
| GGAACGCCGAAGAAAATAAG+AGG | - | chr8_3:64441664-64441683 | Msa1302100:three_prime_UTR | 45.0% | |
| AAAAGGCTGAAGCCAGTTTC+TGG | - | chr8_3:64441776-64441795 | Msa1302100:three_prime_UTR | 45.0% | |
| CGGTGTACAACTTGAACACA+TGG | - | chr8_3:64442268-64442287 | Msa1302100:intron | 45.0% | |
| !! | TTTCCAAAAGTGGCTGGCTT+TGG | + | chr8_3:64442394-64442413 | None:intergenic | 45.0% |
| ! | AAGTTGGTTGACAGCTGAAG+AGG | - | chr8_3:64442494-64442513 | Msa1302100:CDS | 45.0% |
| TGCCCAGTGTTGTACATCAT+AGG | + | chr8_3:64442529-64442548 | None:intergenic | 45.0% | |
| TCTTCCTTGTGTTGCAAGGA+AGG | - | chr8_3:64443241-64443260 | Msa1302100:intron | 45.0% | |
| TGTTGCAAGGAAGGCTGAAT+GGG | - | chr8_3:64443250-64443269 | Msa1302100:intron | 45.0% | |
| !! | GGGCATTGAGTTGGATTAAC+AGG | - | chr8_3:64443270-64443289 | Msa1302100:intron | 45.0% |
| CAAATTGCAACAGGCCTACT+TGG | + | chr8_3:64443331-64443350 | None:intergenic | 45.0% | |
| !!! | CTGGTGTTGCCAGTGTATTT+TGG | + | chr8_3:64443420-64443439 | None:intergenic | 45.0% |
| ATACACTGGCAACACCAGAA+AGG | - | chr8_3:64443422-64443441 | Msa1302100:intron | 45.0% | |
| CTGCAGTTCCACTTCATTTG+CGG | - | chr8_3:64443539-64443558 | Msa1302100:CDS | 45.0% | |
| AAGTCTCTCCGCAAATGAAG+TGG | + | chr8_3:64443550-64443569 | None:intergenic | 45.0% | |
| TCATTTGCGGAGAGACTTGT+TGG | - | chr8_3:64443552-64443571 | Msa1302100:intron | 45.0% | |
| !! | GTTGGCTTTGCATGTGTTGA+AGG | - | chr8_3:64443570-64443589 | Msa1302100:intron | 45.0% |
| TCAGCTTCTGTGCCATATTC+TGG | - | chr8_3:64443733-64443752 | Msa1302100:intron | 45.0% | |
| ! | TGAGCTAATCTCTAGAGACG+AGG | - | chr8_3:64443797-64443816 | Msa1302100:intron | 45.0% |
| ! | GAGCTAATCTCTAGAGACGA+GGG | - | chr8_3:64443798-64443817 | Msa1302100:intron | 45.0% |
| GAGACAGCTAGATTTCGAAC+GGG | - | chr8_3:64443971-64443990 | Msa1302100:CDS | 45.0% | |
| ATTTGTCGCTGACAGGCTAT+TGG | - | chr8_3:64444103-64444122 | Msa1302100:intron | 45.0% | |
| AGTTCTTCTCCCAAGATTGG+TGG | - | chr8_3:64444174-64444193 | Msa1302100:intron | 45.0% | |
| !! | TTTGCCCTTTCAGGTTTCCT+TGG | - | chr8_3:64444213-64444232 | Msa1302100:intron | 45.0% |
| !! | TTGCCCTTTCAGGTTTCCTT+GGG | - | chr8_3:64444214-64444233 | Msa1302100:intron | 45.0% |
| AAGGGTGGGTGATTATCAGA+AGG | - | chr8_3:64444652-64444671 | Msa1302100:intron | 45.0% | |
| ATGTCAAGCCTCCAAGATGA+TGG | - | chr8_3:64444683-64444702 | Msa1302100:intron | 45.0% | |
| TGTCAAGCCTCCAAGATGAT+GGG | - | chr8_3:64444684-64444703 | Msa1302100:intron | 45.0% | |
| AGTTCTTCCCATCATCTTGG+AGG | + | chr8_3:64444694-64444713 | None:intergenic | 45.0% | |
| ! | GTATGTACCGGTCCAGAAAC+TGG | + | chr8_3:64441791-64441810 | None:intergenic | 50.0% |
| !! | TTGCCAAAGCCAGCCACTTT+TGG | - | chr8_3:64442388-64442407 | Msa1302100:intron | 50.0% |
| TCATATGTGGCAGCACTTCC+TGG | - | chr8_3:64442975-64442994 | Msa1302100:intron | 50.0% | |
| CATATGTGGCAGCACTTCCT+GGG | - | chr8_3:64442976-64442995 | Msa1302100:intron | 50.0% | |
| TGATAGGCTCGGGCATTCTA+TGG | - | chr8_3:64443028-64443047 | Msa1302100:CDS | 50.0% | |
| ! | TTCTCCCCTTGCCTGATTTG+TGG | - | chr8_3:64443127-64443146 | Msa1302100:intron | 50.0% |
| TCAGCCTTCCTTGCAACACA+AGG | + | chr8_3:64443248-64443267 | None:intergenic | 50.0% | |
| GTGTTGCAAGGAAGGCTGAA+TGG | - | chr8_3:64443249-64443268 | Msa1302100:intron | 50.0% | |
| !! | AGGCTGAATGGGCATTGAGT+TGG | - | chr8_3:64443261-64443280 | Msa1302100:intron | 50.0% |
| !!! | GTTGCCAGTGTATTTTGGCC+TGG | + | chr8_3:64443415-64443434 | None:intergenic | 50.0% |
| CTGTCTCAGTAACAAGCTGC+AGG | + | chr8_3:64443958-64443977 | None:intergenic | 50.0% | |
| !! | GAGGGCATCACAGACAAACT+CGG | + | chr8_3:64444033-64444052 | None:intergenic | 50.0% |
| GCCAATCAATGCACAAGGGA+GGG | + | chr8_3:64444051-64444070 | None:intergenic | 50.0% | |
| TGCCAATCAATGCACAAGGG+AGG | + | chr8_3:64444052-64444071 | None:intergenic | 50.0% | |
| AGCGGGTAACCACCAATCTT+GGG | + | chr8_3:64444186-64444205 | None:intergenic | 50.0% | |
| AAGCGGGTAACCACCAATCT+TGG | + | chr8_3:64444187-64444206 | None:intergenic | 50.0% | |
| !! | TGCCCTTTCAGGTTTCCTTG+GGG | - | chr8_3:64444215-64444234 | Msa1302100:intron | 50.0% |
| CACCCCAAGGAAACCTGAAA+GGG | + | chr8_3:64444220-64444239 | None:intergenic | 50.0% | |
| ! | GCTGAAGCCAGTTTCTGGAC+CGG | - | chr8_3:64441781-64441800 | Msa1302100:three_prime_UTR | 55.0% |
| GTGCTTCTCAGAGTCGGACA+AGG | + | chr8_3:64442553-64442572 | None:intergenic | 55.0% | |
| !!! | TGTATTTTGGCCTGGCAGGC+TGG | + | chr8_3:64443407-64443426 | None:intergenic | 55.0% |
| !!! | CCAGTGTATTTTGGCCTGGC+AGG | + | chr8_3:64443411-64443430 | None:intergenic | 55.0% |
| CCTGCCAGGCCAAAATACAC+TGG | - | chr8_3:64443408-64443427 | Msa1302100:CDS | 55.0% | |
| ! | GCCCTCCCTTGTGCATTGAT+TGG | - | chr8_3:64444047-64444066 | Msa1302100:CDS | 55.0% |
| GCACCCCAAGGAAACCTGAA+AGG | + | chr8_3:64444221-64444240 | None:intergenic | 55.0% | |
| CACTCTGCAGTCGGAGACGT+AGG | + | chr8_3:64442213-64442232 | None:intergenic | 60.0% | |
| ! | GTTTGATGGGCCAGCCTGCC+AGG | - | chr8_3:64443394-64443413 | Msa1302100:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 64441582 | 64445013 | 64441582 | ID=Msa1302100;Name=Msa1302100 |
| chr8_3 | mRNA | 64441582 | 64445013 | 64441582 | ID=Msa1302100-mRNA-1;Parent=Msa1302100;Name=Msa1302100-mRNA-1;_AED=0.09;_eAED=0.09;_QI=64|1|1|1|1|1|9|271|341 |
| chr8_3 | exon | 64441582 | 64441967 | 64441582 | ID=Msa1302100-mRNA-1:exon:19475;Parent=Msa1302100-mRNA-1 |
| chr8_3 | exon | 64442299 | 64442369 | 64442299 | ID=Msa1302100-mRNA-1:exon:19474;Parent=Msa1302100-mRNA-1 |
| chr8_3 | exon | 64442471 | 64442633 | 64442471 | ID=Msa1302100-mRNA-1:exon:19473;Parent=Msa1302100-mRNA-1 |
| chr8_3 | exon | 64442742 | 64442858 | 64442742 | ID=Msa1302100-mRNA-1:exon:19472;Parent=Msa1302100-mRNA-1 |
| chr8_3 | exon | 64442985 | 64443050 | 64442985 | ID=Msa1302100-mRNA-1:exon:19471;Parent=Msa1302100-mRNA-1 |
| chr8_3 | exon | 64443304 | 64443430 | 64443304 | ID=Msa1302100-mRNA-1:exon:19470;Parent=Msa1302100-mRNA-1 |
| chr8_3 | exon | 64443513 | 64443561 | 64443513 | ID=Msa1302100-mRNA-1:exon:19469;Parent=Msa1302100-mRNA-1 |
| chr8_3 | exon | 64443927 | 64444087 | 64443927 | ID=Msa1302100-mRNA-1:exon:19468;Parent=Msa1302100-mRNA-1 |
| chr8_3 | exon | 64444793 | 64445013 | 64444793 | ID=Msa1302100-mRNA-1:exon:19467;Parent=Msa1302100-mRNA-1 |
| chr8_3 | five_prime_UTR | 64444950 | 64445013 | 64444950 | ID=Msa1302100-mRNA-1:five_prime_utr;Parent=Msa1302100-mRNA-1 |
| chr8_3 | CDS | 64444793 | 64444949 | 64444793 | ID=Msa1302100-mRNA-1:cds;Parent=Msa1302100-mRNA-1 |
| chr8_3 | CDS | 64443927 | 64444087 | 64443927 | ID=Msa1302100-mRNA-1:cds;Parent=Msa1302100-mRNA-1 |
| chr8_3 | CDS | 64443513 | 64443561 | 64443513 | ID=Msa1302100-mRNA-1:cds;Parent=Msa1302100-mRNA-1 |
| chr8_3 | CDS | 64443304 | 64443430 | 64443304 | ID=Msa1302100-mRNA-1:cds;Parent=Msa1302100-mRNA-1 |
| chr8_3 | CDS | 64442985 | 64443050 | 64442985 | ID=Msa1302100-mRNA-1:cds;Parent=Msa1302100-mRNA-1 |
| chr8_3 | CDS | 64442742 | 64442858 | 64442742 | ID=Msa1302100-mRNA-1:cds;Parent=Msa1302100-mRNA-1 |
| chr8_3 | CDS | 64442471 | 64442633 | 64442471 | ID=Msa1302100-mRNA-1:cds;Parent=Msa1302100-mRNA-1 |
| chr8_3 | CDS | 64442299 | 64442369 | 64442299 | ID=Msa1302100-mRNA-1:cds;Parent=Msa1302100-mRNA-1 |
| chr8_3 | CDS | 64441853 | 64441967 | 64441853 | ID=Msa1302100-mRNA-1:cds;Parent=Msa1302100-mRNA-1 |
| chr8_3 | three_prime_UTR | 64441582 | 64441852 | 64441582 | ID=Msa1302100-mRNA-1:three_prime_utr;Parent=Msa1302100-mRNA-1 |
| Gene Sequence |
| Protein sequence |
