Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0033950 | RHN81020.1 | 97.292 | 480 | 13 | 0 | 1 | 480 | 60 | 539 | 0.0 | 972 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0033950 | sp|Q9FZ24|PPR4_ARATH | 43.160 | 519 | 245 | 6 | 1 | 469 | 1 | 519 | 2.21e-144 | 427 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011960 | Msa0033950 | 0.852522 | 4.367970e-61 | -8.615850e-47 |
| Msa0021220 | Msa0033950 | 0.846791 | 1.739051e-59 | -8.615850e-47 |
| Msa0027770 | Msa0033950 | 0.846526 | 2.055266e-59 | -8.615850e-47 |
| Msa0030200 | Msa0033950 | 0.828684 | 7.839681e-55 | -8.615850e-47 |
| Msa0032580 | Msa0033950 | 0.800639 | 1.311304e-48 | -8.615850e-47 |
| Msa0033950 | Msa0034030 | 0.992364 | 7.584718e-193 | -8.615850e-47 |
| Msa0033950 | Msa0037770 | 0.807652 | 4.551689e-50 | -8.615850e-47 |
| Msa0033950 | Msa0043660 | 0.856391 | 3.321621e-62 | -8.615850e-47 |
| Msa0033950 | Msa0048550 | 0.842931 | 1.913232e-58 | -8.615850e-47 |
| Msa0033950 | Msa0054440 | 0.859833 | 3.146103e-63 | -8.615850e-47 |
| Msa0033950 | Msa0054480 | 0.850516 | 1.614104e-60 | -8.615850e-47 |
| Msa0033950 | Msa0059110 | 0.803402 | 3.546185e-49 | -8.615850e-47 |
| Msa0033950 | Msa0061080 | 0.823969 | 1.040141e-53 | -8.615850e-47 |
| Msa0033950 | Msa0061630 | 0.809669 | 1.688115e-50 | -8.615850e-47 |
| Msa0033950 | Msa0063530 | 0.843300 | 1.525184e-58 | -8.615850e-47 |
| Msa0033950 | Msa0067630 | 0.817747 | 2.809465e-52 | -8.615850e-47 |
| Msa0033950 | Msa0070700 | 0.861447 | 1.019310e-63 | -8.615850e-47 |
| Msa0033950 | Msa0075500 | 0.845120 | 4.951969e-59 | -8.615850e-47 |
| Msa0033950 | Msa0091560 | 0.813960 | 1.964849e-51 | -8.615850e-47 |
| Msa0033950 | Msa0105620 | 0.848833 | 4.763183e-60 | -8.615850e-47 |
| Msa0033950 | Msa0115130 | 0.846104 | 2.677828e-59 | -8.615850e-47 |
| Msa0033950 | Msa0115400 | 0.861444 | 1.021871e-63 | -8.615850e-47 |
| Msa0033950 | Msa0118590 | 0.857797 | 1.277685e-62 | -8.615850e-47 |
| Msa0033950 | Msa0123360 | 0.840012 | 1.123197e-57 | -8.615850e-47 |
| Msa0033950 | Msa0127020 | 0.871360 | 7.253993e-67 | -8.615850e-47 |
| Msa0033950 | Msa0128050 | 0.927643 | 8.829156e-92 | -8.615850e-47 |
| Msa0033950 | Msa0137550 | 0.867998 | 9.048067e-66 | -8.615850e-47 |
| Msa0033950 | Msa0139350 | 0.879067 | 1.686539e-69 | -8.615850e-47 |
| Msa0033950 | Msa0141660 | 0.841575 | 4.373305e-58 | -8.615850e-47 |
| Msa0033950 | Msa0144370 | 0.867787 | 1.057789e-65 | -8.615850e-47 |
| Msa0033950 | Msa0146770 | 0.822973 | 1.778290e-53 | -8.615850e-47 |
| Msa0033950 | Msa0150820 | 0.820811 | 5.629671e-53 | -8.615850e-47 |
| Msa0033950 | Msa0159170 | 0.858184 | 9.806012e-63 | -8.615850e-47 |
| Msa0033950 | Msa0160550 | 0.816871 | 4.422768e-52 | -8.615850e-47 |
| Msa0033950 | Msa0165660 | 0.800746 | 1.247034e-48 | -8.615850e-47 |
| Msa0033950 | Msa0168230 | 0.869844 | 2.282248e-66 | -8.615850e-47 |
| Msa0033950 | Msa0169280 | 0.869078 | 4.052882e-66 | -8.615850e-47 |
| Msa0033950 | Msa0170200 | 0.823013 | 1.741036e-53 | -8.615850e-47 |
| Msa0033950 | Msa0179190 | 0.823716 | 1.192153e-53 | -8.615850e-47 |
| Msa0033950 | Msa0187120 | 0.806204 | 9.212966e-50 | -8.615850e-47 |
| Msa0033950 | Msa0189300 | 0.825039 | 5.823866e-54 | -8.615850e-47 |
| Msa0033950 | Msa0220720 | 0.814451 | 1.530695e-51 | -8.615850e-47 |
| Msa0033950 | Msa0228070 | 0.803257 | 3.799648e-49 | -8.615850e-47 |
| Msa0033950 | Msa0231660 | 0.815357 | 9.636869e-52 | -8.615850e-47 |
| Msa0033950 | Msa0241470 | 0.826082 | 3.296336e-54 | -8.615850e-47 |
| Msa0033950 | Msa0279220 | 0.844950 | 5.502556e-59 | -8.615850e-47 |
| Msa0033950 | Msa0279240 | 0.858970 | 5.712899e-63 | -8.615850e-47 |
| Msa0033950 | Msa0309750 | 0.848287 | 6.748224e-60 | -8.615850e-47 |
| Msa0033950 | Msa0318980 | 0.841854 | 3.691032e-58 | -8.615850e-47 |
| Msa0033950 | Msa0325590 | 0.847360 | 1.214633e-59 | -8.615850e-47 |
| Msa0033950 | Msa0345350 | 0.840693 | 7.455493e-58 | -8.615850e-47 |
| Msa0033950 | Msa0345390 | 0.841745 | 3.943427e-58 | -8.615850e-47 |
| Msa0033950 | Msa0351990 | 0.815193 | 1.048159e-51 | -8.615850e-47 |
| Msa0033950 | Msa0383800 | 0.803396 | 3.556307e-49 | -8.615850e-47 |
| Msa0033950 | Msa0388700 | 0.872649 | 2.704839e-67 | -8.615850e-47 |
| Msa0033950 | Msa0393940 | 0.832230 | 1.064465e-55 | -8.615850e-47 |
| Msa0033950 | Msa0397070 | 0.803734 | 3.026084e-49 | -8.615850e-47 |
| Msa0033950 | Msa0397540 | 0.848374 | 6.385920e-60 | -8.615850e-47 |
| Msa0033950 | Msa0398810 | 0.828368 | 9.345316e-55 | -8.615850e-47 |
| Msa0033950 | Msa0402650 | 0.802128 | 6.498810e-49 | -8.615850e-47 |
| Msa0033950 | Msa0409090 | 0.822407 | 2.408637e-53 | -8.615850e-47 |
| Msa0033950 | Msa0411430 | 0.809336 | 1.989588e-50 | -8.615850e-47 |
| Msa0033950 | Msa0422840 | 0.827005 | 1.986100e-54 | -8.615850e-47 |
| Msa0033950 | Msa0422920 | 0.829948 | 3.868930e-55 | -8.615850e-47 |
| Msa0033950 | Msa0428060 | 0.820594 | 6.316483e-53 | -8.615850e-47 |
| Msa0033950 | Msa0434180 | 0.808411 | 3.138142e-50 | -8.615850e-47 |
| Msa0033950 | Msa0437360 | 0.910972 | 1.028745e-82 | -8.615850e-47 |
| Msa0033950 | Msa0446050 | 0.807032 | 6.162178e-50 | -8.615850e-47 |
| Msa0033950 | Msa0449210 | 0.827192 | 1.792182e-54 | -8.615850e-47 |
| Msa0033950 | Msa0474400 | 0.834873 | 2.330249e-56 | -8.615850e-47 |
| Msa0033950 | Msa0481030 | 0.813738 | 2.198862e-51 | -8.615850e-47 |
| Msa0033950 | Msa0481280 | 0.828635 | 8.057835e-55 | -8.615850e-47 |
| Msa0033950 | Msa0481530 | 0.825634 | 4.212372e-54 | -8.615850e-47 |
| Msa0033950 | Msa0482130 | 0.890831 | 6.901964e-74 | -8.615850e-47 |
| Msa0033950 | Msa0486920 | 0.806071 | 9.828110e-50 | -8.615850e-47 |
| Msa0033950 | Msa0489410 | 0.837985 | 3.762977e-57 | -8.615850e-47 |
| Msa0033950 | Msa0493410 | 0.841931 | 3.521659e-58 | -8.615850e-47 |
| Msa0033950 | Msa0497490 | 0.808442 | 3.090236e-50 | -8.615850e-47 |
| Msa0033950 | Msa0500470 | 0.807980 | 3.876672e-50 | -8.615850e-47 |
| Msa0033950 | Msa0502090 | 0.817521 | 3.159405e-52 | -8.615850e-47 |
| Msa0033950 | Msa0522070 | 0.807709 | 4.428575e-50 | -8.615850e-47 |
| Msa0033950 | Msa0529830 | 0.813325 | 2.710796e-51 | -8.615850e-47 |
| Msa0033950 | Msa0529890 | 0.827622 | 1.413262e-54 | -8.615850e-47 |
| Msa0033950 | Msa0542090 | 0.905808 | 2.902386e-80 | -8.615850e-47 |
| Msa0033950 | Msa0542130 | 0.905490 | 4.064803e-80 | -8.615850e-47 |
| Msa0033950 | Msa0554290 | 0.821193 | 4.598182e-53 | -8.615850e-47 |
| Msa0033950 | Msa0555450 | 0.808271 | 3.362126e-50 | -8.615850e-47 |
| Msa0033950 | Msa0566100 | 0.859708 | 3.430329e-63 | -8.615850e-47 |
| Msa0033950 | Msa0581280 | 0.823158 | 1.610601e-53 | -8.615850e-47 |
| Msa0033950 | Msa0585510 | 0.810844 | 9.416680e-51 | -8.615850e-47 |
| Msa0033950 | Msa0585560 | 0.822472 | 2.325690e-53 | -8.615850e-47 |
| Msa0033950 | Msa0605000 | 0.870867 | 1.054498e-66 | -8.615850e-47 |
| Msa0033950 | Msa0610430 | 0.814372 | 1.592954e-51 | -8.615850e-47 |
| Msa0033950 | Msa0615490 | 0.800659 | 1.298937e-48 | -8.615850e-47 |
| Msa0033950 | Msa0617640 | 0.814706 | 1.344009e-51 | -8.615850e-47 |
| Msa0033950 | Msa0625720 | 0.827644 | 1.396139e-54 | -8.615850e-47 |
| Msa0033950 | Msa0643060 | 0.821993 | 3.004400e-53 | -8.615850e-47 |
| Msa0033950 | Msa0648780 | 0.831367 | 1.737917e-55 | -8.615850e-47 |
| Msa0033950 | Msa0660490 | 0.840748 | 7.213761e-58 | -8.615850e-47 |
| Msa0033950 | Msa0660850 | 0.818482 | 1.915859e-52 | -8.615850e-47 |
| Msa0033950 | Msa0663390 | 0.812656 | 3.799536e-51 | -8.615850e-47 |
| Msa0033950 | Msa0685140 | 0.892974 | 9.672370e-75 | -8.615850e-47 |
| Msa0033950 | Msa0689260 | 0.856986 | 2.220183e-62 | -8.615850e-47 |
| Msa0033950 | Msa0691290 | 0.827268 | 1.718695e-54 | -8.615850e-47 |
| Msa0033950 | Msa0692830 | 0.844414 | 7.674892e-59 | -8.615850e-47 |
| Msa0033950 | Msa0692950 | 0.827320 | 1.669402e-54 | -8.615850e-47 |
| Msa0033950 | Msa0698800 | 0.802579 | 5.247388e-49 | -8.615850e-47 |
| Msa0033950 | Msa0702370 | 0.845122 | 4.943433e-59 | -8.615850e-47 |
| Msa0033950 | Msa0702550 | 0.849336 | 3.452423e-60 | -8.615850e-47 |
| Msa0033950 | Msa0709040 | 0.843890 | 1.060751e-58 | -8.615850e-47 |
| Msa0033950 | Msa0711780 | 0.874511 | 6.380460e-68 | -8.615850e-47 |
| Msa0033950 | Msa0715650 | 0.849251 | 3.644486e-60 | -8.615850e-47 |
| Msa0033950 | Msa0715700 | 0.837545 | 4.880128e-57 | -8.615850e-47 |
| Msa0033950 | Msa0719420 | 0.815278 | 1.003130e-51 | -8.615850e-47 |
| Msa0033950 | Msa0719610 | 0.810608 | 1.059086e-50 | -8.615850e-47 |
| Msa0033950 | Msa0741230 | 0.803412 | 3.530235e-49 | -8.615850e-47 |
| Msa0033950 | Msa0745740 | 0.841995 | 3.388344e-58 | -8.615850e-47 |
| Msa0033950 | Msa0754380 | 0.845360 | 4.264766e-59 | -8.615850e-47 |
| Msa0033950 | Msa0755700 | 0.817280 | 3.579440e-52 | -8.615850e-47 |
| Msa0033950 | Msa0757940 | 0.814365 | 1.598744e-51 | -8.615850e-47 |
| Msa0033950 | Msa0763330 | 0.853033 | 3.121196e-61 | -8.615850e-47 |
| Msa0033950 | Msa0772480 | 0.862442 | 5.052528e-64 | -8.615850e-47 |
| Msa0033950 | Msa0789680 | 0.819466 | 1.144298e-52 | -8.615850e-47 |
| Msa0033950 | Msa0793800 | 0.807000 | 6.257859e-50 | -8.615850e-47 |
| Msa0033950 | Msa0794670 | 0.864251 | 1.391045e-64 | -8.615850e-47 |
| Msa0033950 | Msa0795820 | 0.820055 | 8.394842e-53 | -8.615850e-47 |
| Msa0033950 | Msa0796210 | 0.831484 | 1.626130e-55 | -8.615850e-47 |
| Msa0033950 | Msa0798440 | 0.851344 | 9.437815e-61 | -8.615850e-47 |
| Msa0033950 | Msa0799260 | 0.833433 | 5.348468e-56 | -8.615850e-47 |
| Msa0033950 | Msa0799310 | 0.827973 | 1.163404e-54 | -8.615850e-47 |
| Msa0033950 | Msa0802410 | 0.825150 | 5.483894e-54 | -8.615850e-47 |
| Msa0033950 | Msa0816700 | 0.806066 | 9.853209e-50 | -8.615850e-47 |
| Msa0033950 | Msa0819480 | 0.807378 | 5.205331e-50 | -8.615850e-47 |
| Msa0033950 | Msa0830040 | 0.823937 | 1.058087e-53 | -8.615850e-47 |
| Msa0033950 | Msa0830540 | 0.867807 | 1.042171e-65 | -8.615850e-47 |
| Msa0033950 | Msa0831530 | 0.817154 | 3.820598e-52 | -8.615850e-47 |
| Msa0033950 | Msa0862530 | 0.833560 | 4.971415e-56 | -8.615850e-47 |
| Msa0033950 | Msa0869130 | 0.808182 | 3.511545e-50 | -8.615850e-47 |
| Msa0033950 | Msa0876810 | 0.800514 | 1.390717e-48 | -8.615850e-47 |
| Msa0033950 | Msa0887250 | 0.801815 | 7.535836e-49 | -8.615850e-47 |
| Msa0033950 | Msa0909110 | 0.823815 | 1.130221e-53 | -8.615850e-47 |
| Msa0033950 | Msa0909950 | 0.823747 | 1.172859e-53 | -8.615850e-47 |
| Msa0033950 | Msa0937150 | 0.819204 | 1.313320e-52 | -8.615850e-47 |
| Msa0033950 | Msa0945440 | 0.893985 | 3.770829e-75 | -8.615850e-47 |
| Msa0033950 | Msa0964060 | 0.804607 | 1.992003e-49 | -8.615850e-47 |
| Msa0033950 | Msa0969340 | 0.816177 | 6.325566e-52 | -8.615850e-47 |
| Msa0033950 | Msa0970530 | 0.803388 | 3.569708e-49 | -8.615850e-47 |
| Msa0033950 | Msa0987370 | 0.836325 | 9.998443e-57 | -8.615850e-47 |
| Msa0033950 | Msa0989540 | 0.827355 | 1.637781e-54 | -8.615850e-47 |
| Msa0033950 | Msa1009820 | 0.840111 | 1.058529e-57 | -8.615850e-47 |
| Msa0033950 | Msa1014730 | 0.819291 | 1.254382e-52 | -8.615850e-47 |
| Msa0033950 | Msa1023120 | 0.804192 | 2.430516e-49 | -8.615850e-47 |
| Msa0033950 | Msa1051200 | 0.852997 | 3.196714e-61 | -8.615850e-47 |
| Msa0033950 | Msa1082250 | 0.817881 | 2.620147e-52 | -8.615850e-47 |
| Msa0033950 | Msa1083560 | 0.835491 | 1.627473e-56 | -8.615850e-47 |
| Msa0033950 | Msa1091940 | 0.817693 | 2.888357e-52 | -8.615850e-47 |
| Msa0033950 | Msa1097920 | 0.806680 | 7.312781e-50 | -8.615850e-47 |
| Msa0033950 | Msa1128570 | 0.868345 | 6.993866e-66 | -8.615850e-47 |
| Msa0033950 | Msa1137700 | 0.851975 | 6.251843e-61 | -8.615850e-47 |
| Msa0033950 | Msa1144040 | 0.828788 | 7.399551e-55 | -8.615850e-47 |
| Msa0033950 | Msa1153060 | 0.872245 | 3.687579e-67 | -8.615850e-47 |
| Msa0033950 | Msa1160590 | 0.879847 | 8.921640e-70 | -8.615850e-47 |
| Msa0033950 | Msa1174470 | 0.859173 | 4.967909e-63 | -8.615850e-47 |
| Msa0033950 | Msa1179070 | 0.808838 | 2.543522e-50 | -8.615850e-47 |
| Msa0033950 | Msa1181250 | 0.881867 | 1.679881e-70 | -8.615850e-47 |
| Msa0033950 | Msa1181330 | 0.882271 | 1.198028e-70 | -8.615850e-47 |
| Msa0033950 | Msa1208880 | 0.823412 | 1.404908e-53 | -8.615850e-47 |
| Msa0033950 | Msa1209200 | 0.827591 | 1.437792e-54 | -8.615850e-47 |
| Msa0033950 | Msa1209260 | 0.868763 | 5.126319e-66 | -8.615850e-47 |
| Msa0033950 | Msa1209760 | 0.849260 | 3.625089e-60 | -8.615850e-47 |
| Msa0033950 | Msa1217470 | 0.822229 | 2.648551e-53 | -8.615850e-47 |
| Msa0033950 | Msa1224810 | 0.856620 | 2.845054e-62 | -8.615850e-47 |
| Msa0033950 | Msa1237630 | 0.835315 | 1.802081e-56 | -8.615850e-47 |
| Msa0033950 | Msa1237700 | 0.825126 | 5.554337e-54 | -8.615850e-47 |
| Msa0033950 | Msa1245930 | 0.836890 | 7.177554e-57 | -8.615850e-47 |
| Msa0033950 | Msa1251080 | 0.800449 | 1.434097e-48 | -8.615850e-47 |
| Msa0033950 | Msa1259060 | 0.839091 | 1.949605e-57 | -8.615850e-47 |
| Msa0033950 | Msa1263750 | 0.805412 | 1.351801e-49 | -8.615850e-47 |
| Msa0033950 | Msa1266990 | 0.861385 | 1.064763e-63 | -8.615850e-47 |
| Msa0033950 | Msa1275980 | 0.809460 | 1.871621e-50 | -8.615850e-47 |
| Msa0033950 | Msa1294070 | 0.806739 | 7.107095e-50 | -8.615850e-47 |
| Msa0033950 | Msa1306920 | 0.815109 | 1.094065e-51 | -8.615850e-47 |
| Msa0033950 | Msa1332590 | 0.815335 | 9.746298e-52 | -8.615850e-47 |
| Msa0033950 | Msa1358250 | 0.858274 | 9.220600e-63 | -8.615850e-47 |
| Msa0033950 | Msa1384190 | 0.847126 | 1.408557e-59 | -8.615850e-47 |
| Msa0033950 | Msa1384880 | 0.821221 | 4.530118e-53 | -8.615850e-47 |
| Msa0033950 | Msa1392780 | 0.855390 | 6.513847e-62 | -8.615850e-47 |
| Msa0033950 | Msa1394290 | 0.819938 | 8.928992e-53 | -8.615850e-47 |
| Msa0033950 | Msa1400220 | 0.993710 | 1.159838e-201 | -8.615850e-47 |
| Msa0033950 | Msa1400580 | 0.835407 | 1.708937e-56 | -8.615850e-47 |
| Msa0033950 | Msa1403420 | 0.823270 | 1.516364e-53 | -8.615850e-47 |
| Msa0033950 | Msa1411750 | 0.866408 | 2.913447e-65 | -8.615850e-47 |
| Msa0033950 | Msa1419870 | 0.869236 | 3.601133e-66 | -8.615850e-47 |
| Msa0033950 | Msa1429120 | 0.823189 | 1.583863e-53 | -8.615850e-47 |
| Msa0033950 | Msa1437170 | 0.806852 | 6.725969e-50 | -8.615850e-47 |
| Msa0033950 | Msa1439550 | 0.834017 | 3.822134e-56 | -8.615850e-47 |
| Msa0033950 | Msa1445660 | 0.812721 | 3.676132e-51 | -8.615850e-47 |
| Msa0033950 | Msa1457920 | 0.860365 | 2.173384e-63 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0033950 | MtrunA17_Chr1g0194521 | 97.292 | 480 | 13 | 0 | 1 | 480 | 60 | 539 | 0.0 | 972 |
| Msa0033950 | MtrunA17_Chr8g0368151 | 38.377 | 456 | 265 | 7 | 40 | 480 | 29 | 483 | 1.66e-93 | 292 |
| Msa0033950 | MtrunA17_Chr2g0282091 | 30.176 | 454 | 303 | 8 | 29 | 471 | 26 | 476 | 1.77e-62 | 211 |
| Msa0033950 | MtrunA17_Chr8g0359961 | 28.846 | 416 | 293 | 3 | 30 | 442 | 32 | 447 | 6.17e-61 | 207 |
| Msa0033950 | MtrunA17_Chr1g0185601 | 30.839 | 441 | 289 | 9 | 20 | 450 | 25 | 459 | 2.07e-56 | 195 |
| Msa0033950 | MtrunA17_Chr2g0303221 | 30.189 | 424 | 280 | 8 | 13 | 430 | 19 | 432 | 3.18e-56 | 194 |
| Msa0033950 | MtrunA17_Chr4g0021331 | 30.425 | 424 | 281 | 6 | 14 | 431 | 16 | 431 | 2.40e-55 | 192 |
| Msa0033950 | MtrunA17_Chr3g0132571 | 29.252 | 441 | 295 | 8 | 20 | 450 | 26 | 459 | 7.11e-51 | 180 |
| Msa0033950 | MtrunA17_Chr2g0324251 | 27.381 | 420 | 255 | 9 | 51 | 441 | 52 | 450 | 5.56e-42 | 155 |
| Msa0033950 | MtrunA17_Chr1g0155351 | 30.241 | 291 | 199 | 4 | 46 | 332 | 69 | 359 | 1.62e-41 | 152 |
| Msa0033950 | MtrunA17_Chr8g0335951 | 32.018 | 228 | 153 | 2 | 235 | 460 | 199 | 426 | 3.12e-30 | 122 |
| Msa0033950 | MtrunA17_Chr8g0335951 | 28.082 | 292 | 170 | 8 | 9 | 264 | 46 | 333 | 3.64e-19 | 89.7 |
| Msa0033950 | MtrunA17_Chr8g0349421 | 32.653 | 196 | 131 | 1 | 251 | 445 | 3 | 198 | 1.40e-26 | 107 |
| Msa0033950 | MtrunA17_Chr7g0256181 | 23.810 | 399 | 286 | 12 | 38 | 430 | 163 | 549 | 1.68e-24 | 107 |
| Msa0033950 | MtrunA17_Chr1g0171501 | 22.931 | 423 | 306 | 12 | 29 | 445 | 139 | 547 | 2.39e-22 | 100 |
| Msa0033950 | MtrunA17_Chr2g0328121 | 23.197 | 319 | 241 | 4 | 17 | 333 | 30 | 346 | 6.32e-18 | 86.3 |
| Msa0033950 | MtrunA17_Chr8g0349431 | 40.870 | 115 | 65 | 2 | 45 | 157 | 8 | 121 | 1.43e-16 | 76.3 |
| Msa0033950 | MtrunA17_Chr8g0387281 | 22.884 | 319 | 234 | 7 | 82 | 392 | 334 | 648 | 1.71e-12 | 69.7 |
| Msa0033950 | MtrunA17_Chr7g0220481 | 29.213 | 178 | 122 | 3 | 130 | 304 | 283 | 459 | 1.20e-11 | 67.4 |
| Msa0033950 | MtrunA17_Chr8g0377751 | 22.812 | 320 | 223 | 8 | 53 | 359 | 722 | 1030 | 7.40e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0033950 | AT1G02370.1 | 43.160 | 519 | 245 | 6 | 1 | 469 | 1 | 519 | 2.25e-145 | 427 |
| Msa0033950 | AT4G01990.1 | 43.542 | 480 | 249 | 8 | 11 | 469 | 6 | 484 | 2.50e-128 | 382 |
| Msa0033950 | AT1G60770.1 | 37.069 | 464 | 271 | 10 | 33 | 480 | 25 | 483 | 1.13e-89 | 282 |
| Msa0033950 | AT1G02150.1 | 34.259 | 432 | 279 | 4 | 33 | 459 | 69 | 500 | 1.33e-76 | 249 |
| Msa0033950 | AT4G21705.1 | 31.818 | 418 | 281 | 4 | 29 | 442 | 23 | 440 | 1.46e-68 | 227 |
| Msa0033950 | AT2G20710.1 | 29.540 | 413 | 284 | 5 | 32 | 441 | 39 | 447 | 1.15e-57 | 198 |
| Msa0033950 | AT4G02820.1 | 29.895 | 475 | 305 | 9 | 8 | 470 | 41 | 499 | 4.33e-55 | 192 |
| Msa0033950 | AT5G27460.1 | 29.070 | 430 | 290 | 6 | 12 | 431 | 21 | 445 | 5.80e-53 | 186 |
| Msa0033950 | AT5G09450.1 | 31.056 | 322 | 216 | 5 | 25 | 340 | 49 | 370 | 2.66e-48 | 171 |
| Msa0033950 | AT2G20710.2 | 29.942 | 344 | 235 | 4 | 100 | 441 | 13 | 352 | 5.68e-47 | 167 |
| Msa0033950 | AT1G28020.1 | 28.267 | 329 | 231 | 5 | 36 | 359 | 41 | 369 | 3.99e-32 | 129 |
| Msa0033950 | AT1G80270.1 | 26.523 | 279 | 197 | 7 | 19 | 294 | 118 | 391 | 4.30e-24 | 105 |
| Msa0033950 | AT1G80270.3 | 26.523 | 279 | 197 | 7 | 19 | 294 | 118 | 391 | 4.30e-24 | 105 |
| Msa0033950 | AT1G80270.2 | 26.523 | 279 | 197 | 7 | 19 | 294 | 118 | 391 | 4.30e-24 | 105 |
| Msa0033950 | AT1G80270.5 | 26.523 | 279 | 197 | 7 | 19 | 294 | 118 | 391 | 4.30e-24 | 105 |
| Msa0033950 | AT1G80270.4 | 26.523 | 279 | 197 | 7 | 19 | 294 | 118 | 391 | 4.30e-24 | 105 |
| Msa0033950 | AT1G15480.1 | 25.205 | 365 | 261 | 9 | 43 | 402 | 138 | 495 | 3.97e-23 | 103 |
| Msa0033950 | AT3G15590.1 | 29.200 | 250 | 173 | 4 | 46 | 293 | 156 | 403 | 1.31e-22 | 101 |
| Msa0033950 | AT3G15590.2 | 29.200 | 250 | 173 | 4 | 46 | 293 | 156 | 403 | 1.31e-22 | 101 |
| Msa0033950 | AT1G07590.1 | 24.633 | 341 | 251 | 5 | 27 | 365 | 64 | 400 | 2.41e-19 | 91.3 |
| Msa0033950 | AT3G11380.1 | 26.780 | 295 | 180 | 6 | 66 | 355 | 78 | 341 | 8.44e-18 | 86.7 |
| Msa0033950 | AT3G11380.1 | 34.722 | 144 | 90 | 4 | 57 | 196 | 372 | 515 | 4.59e-12 | 68.6 |
| Msa0033950 | AT1G28000.1 | 24.567 | 289 | 210 | 6 | 13 | 293 | 13 | 301 | 1.30e-15 | 79.0 |
| Msa0033950 | AT5G21222.1 | 25.000 | 232 | 148 | 6 | 85 | 294 | 467 | 694 | 2.39e-12 | 70.1 |
| Msa0033950 | AT5G21222.2 | 25.000 | 232 | 148 | 6 | 85 | 294 | 467 | 694 | 2.39e-12 | 70.1 |
| Msa0033950 | AT5G21222.4 | 25.000 | 232 | 148 | 6 | 85 | 294 | 467 | 694 | 2.39e-12 | 70.1 |
| Msa0033950 | AT5G21222.3 | 25.000 | 232 | 148 | 6 | 85 | 294 | 467 | 694 | 2.39e-12 | 70.1 |
| Msa0033950 | AT5G02860.1 | 24.299 | 321 | 221 | 11 | 63 | 365 | 128 | 444 | 6.36e-11 | 65.5 |
| Msa0033950 | AT5G02860.4 | 24.299 | 321 | 221 | 11 | 63 | 365 | 128 | 444 | 6.36e-11 | 65.5 |
| Msa0033950 | AT5G02860.2 | 24.299 | 321 | 221 | 11 | 63 | 365 | 128 | 444 | 6.36e-11 | 65.5 |
| Msa0033950 | AT5G02860.5 | 24.299 | 321 | 221 | 11 | 63 | 365 | 128 | 444 | 6.36e-11 | 65.5 |
| Msa0033950 | AT5G02860.3 | 24.299 | 321 | 221 | 11 | 63 | 365 | 128 | 444 | 6.36e-11 | 65.5 |
Find 137 sgRNAs with CRISPR-Local
Find 211 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAAGGTTTGCCTTCTTATT+TGG | 0.179522 | 1_1:-61822926 | None:intergenic |
| GGGCATAATAAAATTGTTTA+AGG | 0.218164 | 1_1:+61824658 | Msa0033950:CDS |
| AATTACGGCCGTTTGATTTC+CGG | 0.228375 | 1_1:+61822851 | Msa0033950:CDS |
| TTTGATAAGATGGATGAATT+AGG | 0.262779 | 1_1:+61824152 | Msa0033950:CDS |
| GTCTACTTGTTGTTTCTTGA+AGG | 0.279974 | 1_1:-61822788 | None:intergenic |
| ATGAGTTAAGCAAGATTCTT+AGG | 0.291614 | 1_1:+61824993 | Msa0033950:CDS |
| GGCATGTTAGTTATGATTCT+AGG | 0.296691 | 1_1:+61824693 | Msa0033950:CDS |
| CCATATCATTAAGCCTTCTA+AGG | 0.308417 | 1_1:-61824634 | None:intergenic |
| TTATGCTTTCTAACCTTAGA+AGG | 0.314226 | 1_1:+61824621 | Msa0033950:CDS |
| CTTTCCCTTCGATTATATAC+TGG | 0.317101 | 1_1:-61823003 | None:intergenic |
| GCTGCAGAGGACCTTTCTTT+AGG | 0.319713 | 1_1:+61824798 | Msa0033950:CDS |
| GAAAACCAGTACTTATCTTA+AGG | 0.323675 | 1_1:-61825263 | None:intergenic |
| AGGACCTTTCTTTAGGATTC+GGG | 0.341722 | 1_1:+61824805 | Msa0033950:CDS |
| GAGGACCTTTCTTTAGGATT+CGG | 0.351526 | 1_1:+61824804 | Msa0033950:CDS |
| TAGGATTCGGGAAATGTTCA+TGG | 0.370256 | 1_1:+61824817 | Msa0033950:CDS |
| CCTTAGAAGGCTTAATGATA+TGG | 0.371817 | 1_1:+61824634 | Msa0033950:CDS |
| GGAATGTTCTTGTGGGCTTA+AGG | 0.373813 | 1_1:+61825434 | Msa0033950:three_prime_UTR |
| ACAAGAACATTCCCTCCTAT+TGG | 0.387788 | 1_1:-61825424 | None:intergenic |
| TTCTTGCTGAGCCTTTATGC+TGG | 0.387794 | 1_1:+61824518 | Msa0033950:CDS |
| CATATACATAGACATCAAAT+TGG | 0.389303 | 1_1:-61824198 | None:intergenic |
| TTTATTGGAGAAAGGTCAAT+TGG | 0.391224 | 1_1:+61824844 | Msa0033950:CDS |
| CTAGTGATGATTTGATAATC+AGG | 0.397665 | 1_1:+61825229 | Msa0033950:three_prime_UTR |
| GGAAGCTGTGTCGGTCTTTG+AGG | 0.399258 | 1_1:+61824763 | Msa0033950:CDS |
| GTTGGTTGGTGTTGCAGTGC+AGG | 0.407651 | 1_1:+61824715 | Msa0033950:CDS |
| CTCTATGATCGAACCACAGC+AGG | 0.410581 | 1_1:-61822817 | None:intergenic |
| GTTACAAATTCTCGTGGGCT+TGG | 0.417988 | 1_1:-61825114 | None:intergenic |
| TCTACTTGTTGTTTCTTGAA+GGG | 0.418981 | 1_1:-61822787 | None:intergenic |
| CTGCATGAGCTCAGTCCAAT+AGG | 0.427006 | 1_1:+61825409 | Msa0033950:three_prime_UTR |
| GAAGAAGAAACAGATCTTGA+TGG | 0.427741 | 1_1:+61824965 | Msa0033950:CDS |
| AATAAAATTGTTTAAGGAGT+GGG | 0.433563 | 1_1:+61824664 | Msa0033950:CDS |
| TGTTTAAGGAGTGGGAATCT+AGG | 0.433657 | 1_1:+61824672 | Msa0033950:CDS |
| TGGTGCTATGAGCCACTTAG+AGG | 0.441022 | 1_1:+61824868 | Msa0033950:CDS |
| CATTACCAGTCCCAGCATAA+AGG | 0.447077 | 1_1:-61824529 | None:intergenic |
| TCAGTTGGTTAATGTTATGA+AGG | 0.448455 | 1_1:+61824247 | Msa0033950:CDS |
| TCTTGCTGAGCCTTTATGCT+GGG | 0.452519 | 1_1:+61824519 | Msa0033950:CDS |
| ATGGGTGCGGTGTGTATTCA+TGG | 0.462683 | 1_1:-61825154 | None:intergenic |
| GATAGCTCCGATTGGTCACC+GGG | 0.462784 | 1_1:-61824595 | None:intergenic |
| CATAAAGGCTCAGCAAGAAA+TGG | 0.465952 | 1_1:-61824514 | None:intergenic |
| TTAAAGAGGTTTATAGAGTG+TGG | 0.469721 | 1_1:+61824552 | Msa0033950:CDS |
| ATTTGATGTCTATGTATATG+AGG | 0.470560 | 1_1:+61824201 | Msa0033950:CDS |
| CGTCTGCGACACGGTTCCTC+CGG | 0.470565 | 1_1:-61822975 | None:intergenic |
| TTTCTAGGTCGGCTAGTCTT+CGG | 0.471475 | 1_1:-61822949 | None:intergenic |
| TATTTCCTTAAGATAAGTAC+TGG | 0.471573 | 1_1:+61825258 | Msa0033950:three_prime_UTR |
| GCACTTACAGCTTGTGGTGA+AGG | 0.473435 | 1_1:-61824926 | None:intergenic |
| TGGTATTCATACAGTATTGA+AGG | 0.474569 | 1_1:+61825075 | Msa0033950:CDS |
| TATGTGTACTTGTTCTTAGC+AGG | 0.476882 | 1_1:-61824071 | None:intergenic |
| GTTTGATTTCCGGCGGAGGA+AGG | 0.482051 | 1_1:+61822861 | Msa0033950:CDS |
| AGAGACTCTGAGATGAATTA+CGG | 0.482119 | 1_1:+61822836 | Msa0033950:exon |
| TAAAGAGGTTTATAGAGTGT+GGG | 0.486756 | 1_1:+61824553 | Msa0033950:CDS |
| CTGAGCCTTTATGCTGGGAC+TGG | 0.488058 | 1_1:+61824524 | Msa0033950:CDS |
| AGTTATGATTCTAGGTTGGT+TGG | 0.491947 | 1_1:+61824701 | Msa0033950:CDS |
| ATAATCGAAGGGAAAGCCTT+AGG | 0.492451 | 1_1:+61823010 | Msa0033950:CDS |
| TTCAACCACTCCTTTCACTT+TGG | 0.493231 | 1_1:-61824018 | None:intergenic |
| TACGATACTTTCGAAGCTCC+TGG | 0.493561 | 1_1:-61823057 | None:intergenic |
| CACCGGGGTGATCTTCTTGA+GGG | 0.494822 | 1_1:-61824579 | None:intergenic |
| TGTTCTTGTGGGCTTAAGGC+AGG | 0.495189 | 1_1:+61825438 | Msa0033950:three_prime_UTR |
| TGTGCTGCTTTGAATGACCT+TGG | 0.495240 | 1_1:+61824320 | Msa0033950:CDS |
| ATGAATACCAGGAGATGATT+CGG | 0.497054 | 1_1:-61825062 | None:intergenic |
| GGCCGTTTGATTTCCGGCGG+AGG | 0.498441 | 1_1:+61822857 | Msa0033950:CDS |
| TCGGAGAAGCCTTCCTCCGC+CGG | 0.500205 | 1_1:-61822870 | None:intergenic |
| AGATCACCCCGGTGACCAAT+CGG | 0.504230 | 1_1:+61824588 | Msa0033950:CDS |
| TGAACTCGAGAGATGCGTCC+AGG | 0.504375 | 1_1:+61823039 | Msa0033950:CDS |
| GCTGCTATCTATATAAAAGC+TGG | 0.505469 | 1_1:+61824419 | Msa0033950:CDS |
| TTCCTCCGCCGGAAATCAAA+CGG | 0.507328 | 1_1:-61822859 | None:intergenic |
| GCCCACGAGAATTTGTAACT+TGG | 0.511061 | 1_1:+61825118 | Msa0033950:exon |
| GGTCGGCTAGTCTTCGGTAA+AGG | 0.515798 | 1_1:-61822943 | None:intergenic |
| TGAGGTTGAACGTGTTTATG+AGG | 0.516026 | 1_1:+61824343 | Msa0033950:CDS |
| TGTTAGTTATGATTCTAGGT+TGG | 0.519722 | 1_1:+61824697 | Msa0033950:CDS |
| ATAGGAGGGAATGTTCTTGT+GGG | 0.520788 | 1_1:+61825427 | Msa0033950:three_prime_UTR |
| AAGATGAAGACAAAATTGAC+TGG | 0.525053 | 1_1:+61824378 | Msa0033950:CDS |
| TTGTGGGCTTAAGGCAGGAT+AGG | 0.526744 | 1_1:+61825443 | Msa0033950:three_prime_UTR |
| TACTTGTTCTTAGCAGGAGG+AGG | 0.531968 | 1_1:-61824065 | None:intergenic |
| TGGGACTGGTAATGTTAAAG+AGG | 0.532622 | 1_1:+61824538 | Msa0033950:CDS |
| AGATAGCTCCGATTGGTCAC+CGG | 0.533726 | 1_1:-61824596 | None:intergenic |
| CCCACGAGAATTTGTAACTT+GGG | 0.533882 | 1_1:+61825119 | Msa0033950:exon |
| ATTTCCCGAATCCTAAAGAA+AGG | 0.537745 | 1_1:-61824809 | None:intergenic |
| TGCTTTGAATGACCTTGGTG+AGG | 0.538207 | 1_1:+61824325 | Msa0033950:CDS |
| TCACCGGGGTGATCTTCTTG+AGG | 0.539174 | 1_1:-61824580 | None:intergenic |
| TTGGAGAAAGGTCAATTGGA+TGG | 0.539563 | 1_1:+61824848 | Msa0033950:CDS |
| AGAAAAGCACTTACAGCTTG+TGG | 0.542366 | 1_1:-61824932 | None:intergenic |
| AAAGAGGTTTATAGAGTGTG+GGG | 0.547043 | 1_1:+61824554 | Msa0033950:CDS |
| GAAGCTCTCAAGAGCTGCAG+AGG | 0.547848 | 1_1:+61824785 | Msa0033950:CDS |
| AGCTGAGCTTCCAAATAAGA+AGG | 0.548369 | 1_1:+61822916 | Msa0033950:CDS |
| GATCTTGTGTCCAAAGTGAA+AGG | 0.549809 | 1_1:+61824008 | Msa0033950:CDS |
| ACTGCATCCGAATCATCTCC+TGG | 0.552993 | 1_1:+61825055 | Msa0033950:CDS |
| AGAAATGGTAAGTTTCGCGT+TGG | 0.553517 | 1_1:-61824499 | None:intergenic |
| TTACAGCTTGTGGTGAAGGT+TGG | 0.556374 | 1_1:-61824922 | None:intergenic |
| TAATAAAATTGTTTAAGGAG+TGG | 0.559489 | 1_1:+61824663 | Msa0033950:CDS |
| TTCAATACTGTATGAATACC+AGG | 0.559830 | 1_1:-61825073 | None:intergenic |
| TCCCAAGTTACAAATTCTCG+TGG | 0.560694 | 1_1:-61825120 | None:intergenic |
| TTGAACCAGTATATAATCGA+AGG | 0.561352 | 1_1:+61822998 | Msa0033950:CDS |
| ATTGGTTGCAGATAATGGAA+TGG | 0.561950 | 1_1:+61823934 | Msa0033950:intron |
| AATAGGAGGGAATGTTCTTG+TGG | 0.564209 | 1_1:+61825426 | Msa0033950:three_prime_UTR |
| AGCTGAGTTGATGCTTAAGA+AGG | 0.568467 | 1_1:+61824454 | Msa0033950:CDS |
| TGGTAAGTTTCGCGTTGGCG+CGG | 0.569478 | 1_1:-61824494 | None:intergenic |
| CTGAAAGTGCGGCCTCTAAG+TGG | 0.571070 | 1_1:-61824880 | None:intergenic |
| ATGTCTATGTATATGAGGCT+AGG | 0.571867 | 1_1:+61824206 | Msa0033950:CDS |
| TAGATTCCATCATGCATTCG+AGG | 0.573744 | 1_1:+61823078 | Msa0033950:CDS |
| TTATCAAATCATCACTAGCT+CGG | 0.573776 | 1_1:-61825224 | None:intergenic |
| CATGGACAAGGAAGCTGTGT+CGG | 0.574022 | 1_1:+61824754 | Msa0033950:CDS |
| CATGAGCTCAGTCCAATAGG+AGG | 0.577937 | 1_1:+61825412 | Msa0033950:three_prime_UTR |
| CTGGTTCAACGTCTGCGACA+CGG | 0.577943 | 1_1:-61822984 | None:intergenic |
| ACCGTCGAAAGTTCCTCAGT+TGG | 0.578763 | 1_1:+61824232 | Msa0033950:CDS |
| ACGACTATGCACGGCTGCGA+CGG | 0.581337 | 1_1:+61822892 | Msa0033950:CDS |
| TAGAAGGCTTAATGATATGG+AGG | 0.581977 | 1_1:+61824637 | Msa0033950:CDS |
| GAGGCCGCACTTTCAGAAGT+CGG | 0.583270 | 1_1:+61824887 | Msa0033950:CDS |
| ACCAACTGAGGAACTTTCGA+CGG | 0.585028 | 1_1:-61824233 | None:intergenic |
| CATAATAAGATAGCTCCGAT+TGG | 0.585163 | 1_1:-61824603 | None:intergenic |
| GCGATACCTCGAATGCATGA+TGG | 0.585983 | 1_1:-61823084 | None:intergenic |
| GTGTACTTGTTCTTAGCAGG+AGG | 0.589015 | 1_1:-61824068 | None:intergenic |
| TGGTTAATGTTATGAAGGAG+AGG | 0.593769 | 1_1:+61824252 | Msa0033950:CDS |
| ATCACATGTGTATCATATGT+AGG | 0.598621 | 1_1:+61825190 | Msa0033950:three_prime_UTR |
| TTCATAACATTAACCAACTG+AGG | 0.600464 | 1_1:-61824245 | None:intergenic |
| AGAAGGCTTAATGATATGGA+GGG | 0.604451 | 1_1:+61824638 | Msa0033950:CDS |
| GCTAAGAACAAGTACACATA+CGG | 0.606065 | 1_1:+61824074 | Msa0033950:CDS |
| TCTTCTAAACTGTTACTGCA+AGG | 0.614146 | 1_1:+61824100 | Msa0033950:CDS |
| TACGGCCGTTTGATTTCCGG+CGG | 0.616646 | 1_1:+61822854 | Msa0033950:CDS |
| GGCTTACTTGAGTCAAAACA+TGG | 0.616784 | 1_1:+61824736 | Msa0033950:CDS |
| CCCAAGTTACAAATTCTCGT+GGG | 0.622015 | 1_1:-61825119 | None:intergenic |
| CTTGAGTCAAAACATGGACA+AGG | 0.623542 | 1_1:+61824742 | Msa0033950:CDS |
| AAGAGGTTTATAGAGTGTGG+GGG | 0.627275 | 1_1:+61824555 | Msa0033950:CDS |
| TGAACCAGTATATAATCGAA+GGG | 0.630767 | 1_1:+61822999 | Msa0033950:CDS |
| TCGCAGCCGTGCATAGTCGT+CGG | 0.630947 | 1_1:-61822889 | None:intergenic |
| CTAGCCGACCTAGAAAAGAC+CGG | 0.635101 | 1_1:+61822956 | Msa0033950:CDS |
| TGAGTTGATGCTTAAGAAGG+TGG | 0.644162 | 1_1:+61824457 | Msa0033950:CDS |
| ATGAGCTCAGTCCAATAGGA+GGG | 0.651102 | 1_1:+61825413 | Msa0033950:three_prime_UTR |
| TAATGGAATGGATGATGATG+AGG | 0.652324 | 1_1:+61823946 | Msa0033950:CDS |
| CAAGGAACTAATGCTAGACA+AGG | 0.652550 | 1_1:+61824118 | Msa0033950:CDS |
| GACCCTCAAGAAGATCACCC+CGG | 0.654594 | 1_1:+61824577 | Msa0033950:CDS |
| AGTAGACAAAATCCCTGCTG+TGG | 0.658513 | 1_1:+61822804 | Msa0033950:five_prime_UTR |
| ATCGCCGACTTCTGAAAGTG+CGG | 0.674194 | 1_1:-61824891 | None:intergenic |
| TCTATGATCGAACCACAGCA+GGG | 0.676707 | 1_1:-61822816 | None:intergenic |
| GCTTCTCCGACGACTATGCA+CGG | 0.690136 | 1_1:+61822883 | Msa0033950:CDS |
| GCCGACCTAGAAAAGACCGG+AGG | 0.743237 | 1_1:+61822959 | Msa0033950:CDS |
| TGTGTCCAAAGTGAAAGGAG+TGG | 0.764655 | 1_1:+61824013 | Msa0033950:CDS |
| AAACACGTTCAACCTCACCA+AGG | 0.766259 | 1_1:-61824337 | None:intergenic |
| ATAGCTCCGATTGGTCACCG+GGG | 0.806286 | 1_1:-61824594 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATAATGATGTTTTGAT+TGG | + | chr1_1:61823916-61823935 | Msa0033950:intron | 15.0% |
| !! | TCAACATGAATCAAAATTTA+GGG | - | chr1_1:61823132-61823151 | None:intergenic | 20.0% |
| !! | TTGTTAATAAATGAATCAAC+TGG | + | chr1_1:61823383-61823402 | Msa0033950:intron | 20.0% |
| !! | AGATTTAAAGATTAACAAGT+TGG | + | chr1_1:61823764-61823783 | Msa0033950:intron | 20.0% |
| !! | TAATAAAATTGTTTAAGGAG+TGG | + | chr1_1:61824663-61824682 | Msa0033950:CDS | 20.0% |
| !! | AATAAAATTGTTTAAGGAGT+GGG | + | chr1_1:61824664-61824683 | Msa0033950:CDS | 20.0% |
| !! | TTAAAAAAGACATAAACTGT+CGG | + | chr1_1:61825353-61825372 | Msa0033950:three_prime_UTR | 20.0% |
| !! | AAATTTAGGGTGGAAAAAAT+TGG | - | chr1_1:61823119-61823138 | None:intergenic | 25.0% |
| ! | CTCAACATGAATCAAAATTT+AGG | - | chr1_1:61823133-61823152 | None:intergenic | 25.0% |
| ! | AAAATTAGTTAGAGTCGTTT+AGG | - | chr1_1:61823229-61823248 | None:intergenic | 25.0% |
| ! | ACTAATTATGTTCTGTGTAA+TGG | + | chr1_1:61823347-61823366 | Msa0033950:intron | 25.0% |
| ! | TTATATAGTAGTCACAAGAT+CGG | + | chr1_1:61823448-61823467 | Msa0033950:intron | 25.0% |
| !!! | TTTACCATCTTTTTTACGAT+AGG | - | chr1_1:61823606-61823625 | None:intergenic | 25.0% |
| !! | TAAAGATTAACAAGTTGGAT+AGG | + | chr1_1:61823769-61823788 | Msa0033950:intron | 25.0% |
| !! | AAAGATTAACAAGTTGGATA+GGG | + | chr1_1:61823770-61823789 | Msa0033950:intron | 25.0% |
| ! | TAGTATATGATAGAACACTA+TGG | + | chr1_1:61823796-61823815 | Msa0033950:intron | 25.0% |
| !! | TGAGGCAAATTAATTTTTCA+TGG | + | chr1_1:61823964-61823983 | Msa0033950:CDS | 25.0% |
| !! | GAGGCAAATTAATTTTTCAT+GGG | + | chr1_1:61823965-61823984 | Msa0033950:CDS | 25.0% |
| !!! | ATTGTCTCATTTTGATAAGA+TGG | + | chr1_1:61824142-61824161 | Msa0033950:CDS | 25.0% |
| ! | TTTGATAAGATGGATGAATT+AGG | + | chr1_1:61824152-61824171 | Msa0033950:CDS | 25.0% |
| ! | CATATACATAGACATCAAAT+TGG | - | chr1_1:61824201-61824220 | None:intergenic | 25.0% |
| ! | ATTTGATGTCTATGTATATG+AGG | + | chr1_1:61824201-61824220 | Msa0033950:CDS | 25.0% |
| !! | CTGAATTTACATACATTTTG+TGG | + | chr1_1:61824288-61824307 | Msa0033950:CDS | 25.0% |
| ! | GGGCATAATAAAATTGTTTA+AGG | + | chr1_1:61824658-61824677 | Msa0033950:CDS | 25.0% |
| !!! | AATGTTCATGGTGTTTTTAT+TGG | + | chr1_1:61824829-61824848 | Msa0033950:CDS | 25.0% |
| !!! | AGTAATGCAAGTTTTAATAG+AGG | - | chr1_1:61825038-61825057 | None:intergenic | 25.0% |
| !!! | GTGATTGTTTTTTCAATGAT+GGG | - | chr1_1:61825175-61825194 | None:intergenic | 25.0% |
| !!! | TGTGATTGTTTTTTCAATGA+TGG | - | chr1_1:61825176-61825195 | None:intergenic | 25.0% |
| ! | TATTTCCTTAAGATAAGTAC+TGG | + | chr1_1:61825258-61825277 | Msa0033950:three_prime_UTR | 25.0% |
| !!! | TTTCTTGAAGGGTTTTGTTA+GGG | - | chr1_1:61822779-61822798 | None:intergenic | 30.0% |
| !! | TCTACTTGTTGTTTCTTGAA+GGG | - | chr1_1:61822790-61822809 | None:intergenic | 30.0% |
| TAAAGGTTTGCCTTCTTATT+TGG | - | chr1_1:61822929-61822948 | None:intergenic | 30.0% | |
| TTGAACCAGTATATAATCGA+AGG | + | chr1_1:61822998-61823017 | Msa0033950:CDS | 30.0% | |
| TGAACCAGTATATAATCGAA+GGG | + | chr1_1:61822999-61823018 | Msa0033950:CDS | 30.0% | |
| ACATGAATCAAAATTTAGGG+TGG | - | chr1_1:61823129-61823148 | None:intergenic | 30.0% | |
| TGATGATAAACTATGAAGCA+TGG | - | chr1_1:61823307-61823326 | None:intergenic | 30.0% | |
| !!! | AATTAGTTTTGCCTTGTCTA+TGG | - | chr1_1:61823334-61823353 | None:intergenic | 30.0% |
| !!! | CGCTTATTTTATTCTCATGT+TGG | - | chr1_1:61823500-61823519 | None:intergenic | 30.0% |
| ATGACAATATTAGAGAGAGT+TGG | + | chr1_1:61823573-61823592 | Msa0033950:intron | 30.0% | |
| TGACAATATTAGAGAGAGTT+GGG | + | chr1_1:61823574-61823593 | Msa0033950:intron | 30.0% | |
| ! | AGATGGTAAAAGTTTGACTT+AGG | + | chr1_1:61823616-61823635 | Msa0033950:intron | 30.0% |
| !! | TTTTGATTGGTTGCAGATAA+TGG | + | chr1_1:61823929-61823948 | Msa0033950:intron | 30.0% |
| TTCATAACATTAACCAACTG+AGG | - | chr1_1:61824248-61824267 | None:intergenic | 30.0% | |
| TCAGTTGGTTAATGTTATGA+AGG | + | chr1_1:61824247-61824266 | Msa0033950:CDS | 30.0% | |
| ! | ACATACATTTTGTGGATGAA+TGG | + | chr1_1:61824296-61824315 | Msa0033950:CDS | 30.0% |
| AAGATGAAGACAAAATTGAC+TGG | + | chr1_1:61824378-61824397 | Msa0033950:CDS | 30.0% | |
| ! | CTTTTATATAGATAGCAGCA+AGG | - | chr1_1:61824418-61824437 | None:intergenic | 30.0% |
| TTAAAGAGGTTTATAGAGTG+TGG | + | chr1_1:61824552-61824571 | Msa0033950:CDS | 30.0% | |
| TAAAGAGGTTTATAGAGTGT+GGG | + | chr1_1:61824553-61824572 | Msa0033950:CDS | 30.0% | |
| TTATGCTTTCTAACCTTAGA+AGG | + | chr1_1:61824621-61824640 | Msa0033950:CDS | 30.0% | |
| TGTTAGTTATGATTCTAGGT+TGG | + | chr1_1:61824697-61824716 | Msa0033950:CDS | 30.0% | |
| !! | ATGGTGTTTTTATTGGAGAA+AGG | + | chr1_1:61824836-61824855 | Msa0033950:CDS | 30.0% |
| TTTATTGGAGAAAGGTCAAT+TGG | + | chr1_1:61824844-61824863 | Msa0033950:CDS | 30.0% | |
| ATGAGTTAAGCAAGATTCTT+AGG | + | chr1_1:61824993-61825012 | Msa0033950:CDS | 30.0% | |
| TTCAATACTGTATGAATACC+AGG | - | chr1_1:61825076-61825095 | None:intergenic | 30.0% | |
| ! | TGGTATTCATACAGTATTGA+AGG | + | chr1_1:61825075-61825094 | Msa0033950:CDS | 30.0% |
| ATCACATGTGTATCATATGT+AGG | + | chr1_1:61825190-61825209 | Msa0033950:three_prime_UTR | 30.0% | |
| TTATCAAATCATCACTAGCT+CGG | - | chr1_1:61825227-61825246 | None:intergenic | 30.0% | |
| ! | CTAGTGATGATTTGATAATC+AGG | + | chr1_1:61825229-61825248 | Msa0033950:three_prime_UTR | 30.0% |
| GAAAACCAGTACTTATCTTA+AGG | - | chr1_1:61825266-61825285 | None:intergenic | 30.0% | |
| !!! | TCTAGTTGTTTTGTTTGCTA+TGG | + | chr1_1:61825313-61825332 | Msa0033950:three_prime_UTR | 30.0% |
| !!! | GTTTCTTGAAGGGTTTTGTT+AGG | - | chr1_1:61822780-61822799 | None:intergenic | 35.0% |
| !! | GTCTACTTGTTGTTTCTTGA+AGG | - | chr1_1:61822791-61822810 | None:intergenic | 35.0% |
| !! | AGAGACTCTGAGATGAATTA+CGG | + | chr1_1:61822836-61822855 | Msa0033950:exon | 35.0% |
| CTTTCCCTTCGATTATATAC+TGG | - | chr1_1:61823006-61823025 | None:intergenic | 35.0% | |
| ATCATCACAATCCATAGACA+AGG | + | chr1_1:61823320-61823339 | Msa0033950:intron | 35.0% | |
| ! | AAATGAATCAACTGGCTTAG+TGG | + | chr1_1:61823391-61823410 | Msa0033950:intron | 35.0% |
| AGCACCTATCGTAAAAAAGA+TGG | + | chr1_1:61823599-61823618 | Msa0033950:intron | 35.0% | |
| ! | TGGTAAAAGTTTGACTTAGG+TGG | + | chr1_1:61823619-61823638 | Msa0033950:intron | 35.0% |
| ! | GACCTGTAGATTTTGTAGTA+CGG | + | chr1_1:61823661-61823680 | Msa0033950:intron | 35.0% |
| ! | CAAGTCTTATCCCACTAATT+GGG | - | chr1_1:61823846-61823865 | None:intergenic | 35.0% |
| !! | ATTGGTTGCAGATAATGGAA+TGG | + | chr1_1:61823934-61823953 | Msa0033950:intron | 35.0% |
| ! | TAATGGAATGGATGATGATG+AGG | + | chr1_1:61823946-61823965 | Msa0033950:CDS | 35.0% |
| TATGTGTACTTGTTCTTAGC+AGG | - | chr1_1:61824074-61824093 | None:intergenic | 35.0% | |
| GCTAAGAACAAGTACACATA+CGG | + | chr1_1:61824074-61824093 | Msa0033950:CDS | 35.0% | |
| TCTTCTAAACTGTTACTGCA+AGG | + | chr1_1:61824100-61824119 | Msa0033950:CDS | 35.0% | |
| ATGTCTATGTATATGAGGCT+AGG | + | chr1_1:61824206-61824225 | Msa0033950:CDS | 35.0% | |
| TGGTTAATGTTATGAAGGAG+AGG | + | chr1_1:61824252-61824271 | Msa0033950:CDS | 35.0% | |
| GCTGCTATCTATATAAAAGC+TGG | + | chr1_1:61824419-61824438 | Msa0033950:CDS | 35.0% | |
| AAAGAGGTTTATAGAGTGTG+GGG | + | chr1_1:61824554-61824573 | Msa0033950:CDS | 35.0% | |
| CATAATAAGATAGCTCCGAT+TGG | - | chr1_1:61824606-61824625 | None:intergenic | 35.0% | |
| CCATATCATTAAGCCTTCTA+AGG | - | chr1_1:61824637-61824656 | None:intergenic | 35.0% | |
| CCTTAGAAGGCTTAATGATA+TGG | + | chr1_1:61824634-61824653 | Msa0033950:CDS | 35.0% | |
| TAGAAGGCTTAATGATATGG+AGG | + | chr1_1:61824637-61824656 | Msa0033950:CDS | 35.0% | |
| AGAAGGCTTAATGATATGGA+GGG | + | chr1_1:61824638-61824657 | Msa0033950:CDS | 35.0% | |
| GGCATGTTAGTTATGATTCT+AGG | + | chr1_1:61824693-61824712 | Msa0033950:CDS | 35.0% | |
| !! | AGTTATGATTCTAGGTTGGT+TGG | + | chr1_1:61824701-61824720 | Msa0033950:CDS | 35.0% |
| ATTTCCCGAATCCTAAAGAA+AGG | - | chr1_1:61824812-61824831 | None:intergenic | 35.0% | |
| GAAGAAGAAACAGATCTTGA+TGG | + | chr1_1:61824965-61824984 | Msa0033950:CDS | 35.0% | |
| ATGAATACCAGGAGATGATT+CGG | - | chr1_1:61825065-61825084 | None:intergenic | 35.0% | |
| !!! | TGTTTTTTCAATGATGGGTG+CGG | - | chr1_1:61825170-61825189 | None:intergenic | 35.0% |
| AAAAAGACATAAACTGTCGG+TGG | + | chr1_1:61825356-61825375 | Msa0033950:three_prime_UTR | 35.0% | |
| ! | AATTACGGCCGTTTGATTTC+CGG | + | chr1_1:61822851-61822870 | Msa0033950:CDS | 40.0% |
| AGCTGAGCTTCCAAATAAGA+AGG | + | chr1_1:61822916-61822935 | Msa0033950:CDS | 40.0% | |
| ATAATCGAAGGGAAAGCCTT+AGG | + | chr1_1:61823010-61823029 | Msa0033950:CDS | 40.0% | |
| ! | CTCGAGTTCATCTTTTCCTA+AGG | - | chr1_1:61823029-61823048 | None:intergenic | 40.0% |
| TAGATTCCATCATGCATTCG+AGG | + | chr1_1:61823078-61823097 | Msa0033950:CDS | 40.0% | |
| !! | GTAACATCGACTCTGATTGA+AGG | + | chr1_1:61823168-61823187 | Msa0033950:intron | 40.0% |
| ! | TAAAGTACCACTCAAGCTGA+AGG | + | chr1_1:61823420-61823439 | Msa0033950:intron | 40.0% |
| ! | AAAGTACCACTCAAGCTGAA+GGG | + | chr1_1:61823421-61823440 | Msa0033950:intron | 40.0% |
| ACAAGATCGGTGATGTTGTA+TGG | + | chr1_1:61823461-61823480 | Msa0033950:intron | 40.0% | |
| ! | AAGTTTGACTTAGGTGGTCT+AGG | + | chr1_1:61823625-61823644 | Msa0033950:intron | 40.0% |
| CTCCGTACTACAAAATCTAC+AGG | - | chr1_1:61823666-61823685 | None:intergenic | 40.0% | |
| TGATTTGACTAACCTCCATC+TGG | - | chr1_1:61823695-61823714 | None:intergenic | 40.0% | |
| ! | GAGGTTAGTCAAATCACTTG+AGG | + | chr1_1:61823699-61823718 | Msa0033950:intron | 40.0% |
| CTTATCCCACTAATTGGGAT+CGG | - | chr1_1:61823841-61823860 | None:intergenic | 40.0% | |
| ! | CCAAGTCTTATCCCACTAAT+TGG | - | chr1_1:61823847-61823866 | None:intergenic | 40.0% |
| CCAATTAGTGGGATAAGACT+TGG | + | chr1_1:61823844-61823863 | Msa0033950:intron | 40.0% | |
| GATCTTGTGTCCAAAGTGAA+AGG | + | chr1_1:61824008-61824027 | Msa0033950:CDS | 40.0% | |
| TTCAACCACTCCTTTCACTT+TGG | - | chr1_1:61824021-61824040 | None:intergenic | 40.0% | |
| CAAGGAACTAATGCTAGACA+AGG | + | chr1_1:61824118-61824137 | Msa0033950:CDS | 40.0% | |
| TGAGGTTGAACGTGTTTATG+AGG | + | chr1_1:61824343-61824362 | Msa0033950:CDS | 40.0% | |
| !! | AGCTGAGTTGATGCTTAAGA+AGG | + | chr1_1:61824454-61824473 | Msa0033950:CDS | 40.0% |
| !! | TGAGTTGATGCTTAAGAAGG+TGG | + | chr1_1:61824457-61824476 | Msa0033950:CDS | 40.0% |
| AGAAATGGTAAGTTTCGCGT+TGG | - | chr1_1:61824502-61824521 | None:intergenic | 40.0% | |
| CATAAAGGCTCAGCAAGAAA+TGG | - | chr1_1:61824517-61824536 | None:intergenic | 40.0% | |
| ! | TGGGACTGGTAATGTTAAAG+AGG | + | chr1_1:61824538-61824557 | Msa0033950:CDS | 40.0% |
| AAGAGGTTTATAGAGTGTGG+GGG | + | chr1_1:61824555-61824574 | Msa0033950:CDS | 40.0% | |
| TGTTTAAGGAGTGGGAATCT+AGG | + | chr1_1:61824672-61824691 | Msa0033950:CDS | 40.0% | |
| GGCTTACTTGAGTCAAAACA+TGG | + | chr1_1:61824736-61824755 | Msa0033950:CDS | 40.0% | |
| CTTGAGTCAAAACATGGACA+AGG | + | chr1_1:61824742-61824761 | Msa0033950:CDS | 40.0% | |
| !! | GAGGACCTTTCTTTAGGATT+CGG | + | chr1_1:61824804-61824823 | Msa0033950:CDS | 40.0% |
| !! | AGGACCTTTCTTTAGGATTC+GGG | + | chr1_1:61824805-61824824 | Msa0033950:CDS | 40.0% |
| TAGGATTCGGGAAATGTTCA+TGG | + | chr1_1:61824817-61824836 | Msa0033950:CDS | 40.0% | |
| TTGGAGAAAGGTCAATTGGA+TGG | + | chr1_1:61824848-61824867 | Msa0033950:CDS | 40.0% | |
| !! | AGAAAAGCACTTACAGCTTG+TGG | - | chr1_1:61824935-61824954 | None:intergenic | 40.0% |
| CCCAAGTTACAAATTCTCGT+GGG | - | chr1_1:61825122-61825141 | None:intergenic | 40.0% | |
| CCCACGAGAATTTGTAACTT+GGG | + | chr1_1:61825119-61825138 | Msa0033950:exon | 40.0% | |
| TCCCAAGTTACAAATTCTCG+TGG | - | chr1_1:61825123-61825142 | None:intergenic | 40.0% | |
| ACAAGAACATTCCCTCCTAT+TGG | - | chr1_1:61825427-61825446 | None:intergenic | 40.0% | |
| AATAGGAGGGAATGTTCTTG+TGG | + | chr1_1:61825426-61825445 | Msa0033950:three_prime_UTR | 40.0% | |
| ATAGGAGGGAATGTTCTTGT+GGG | + | chr1_1:61825427-61825446 | Msa0033950:three_prime_UTR | 40.0% | |
| AGTAGACAAAATCCCTGCTG+TGG | + | chr1_1:61822804-61822823 | Msa0033950:five_prime_UTR | 45.0% | |
| TCTATGATCGAACCACAGCA+GGG | - | chr1_1:61822819-61822838 | None:intergenic | 45.0% | |
| !! | TTTCTAGGTCGGCTAGTCTT+CGG | - | chr1_1:61822952-61822971 | None:intergenic | 45.0% |
| TACGATACTTTCGAAGCTCC+TGG | - | chr1_1:61823060-61823079 | None:intergenic | 45.0% | |
| AATTGTCCCTTCAGCTTGAG+TGG | - | chr1_1:61823430-61823449 | None:intergenic | 45.0% | |
| AGGATGTTGTGTTGGATGTG+TGG | + | chr1_1:61823531-61823550 | Msa0033950:intron | 45.0% | |
| AGTCAAATCACTTGAGGCAG+AGG | + | chr1_1:61823705-61823724 | Msa0033950:intron | 45.0% | |
| ACTAATTGGGATCGGCTACA+TGG | - | chr1_1:61823833-61823852 | None:intergenic | 45.0% | |
| ATGTAGCCGATCCCAATTAG+TGG | + | chr1_1:61823832-61823851 | Msa0033950:intron | 45.0% | |
| TGTAGCCGATCCCAATTAGT+GGG | + | chr1_1:61823833-61823852 | Msa0033950:intron | 45.0% | |
| ! | AGTGGGATAAGACTTGGTTG+TGG | + | chr1_1:61823850-61823869 | Msa0033950:intron | 45.0% |
| TGTGTCCAAAGTGAAAGGAG+TGG | + | chr1_1:61824013-61824032 | Msa0033950:CDS | 45.0% | |
| TACTTGTTCTTAGCAGGAGG+AGG | - | chr1_1:61824068-61824087 | None:intergenic | 45.0% | |
| GTGTACTTGTTCTTAGCAGG+AGG | - | chr1_1:61824071-61824090 | None:intergenic | 45.0% | |
| ACCAACTGAGGAACTTTCGA+CGG | - | chr1_1:61824236-61824255 | None:intergenic | 45.0% | |
| !! | TGTGCTGCTTTGAATGACCT+TGG | + | chr1_1:61824320-61824339 | Msa0033950:CDS | 45.0% |
| ! | TGCTTTGAATGACCTTGGTG+AGG | + | chr1_1:61824325-61824344 | Msa0033950:CDS | 45.0% |
| AAACACGTTCAACCTCACCA+AGG | - | chr1_1:61824340-61824359 | None:intergenic | 45.0% | |
| TTCTTGCTGAGCCTTTATGC+TGG | + | chr1_1:61824518-61824537 | Msa0033950:CDS | 45.0% | |
| TCTTGCTGAGCCTTTATGCT+GGG | + | chr1_1:61824519-61824538 | Msa0033950:CDS | 45.0% | |
| CATTACCAGTCCCAGCATAA+AGG | - | chr1_1:61824532-61824551 | None:intergenic | 45.0% | |
| TTACAGCTTGTGGTGAAGGT+TGG | - | chr1_1:61824925-61824944 | None:intergenic | 45.0% | |
| GTTACAAATTCTCGTGGGCT+TGG | - | chr1_1:61825117-61825136 | None:intergenic | 45.0% | |
| GCCCACGAGAATTTGTAACT+TGG | + | chr1_1:61825118-61825137 | Msa0033950:exon | 45.0% | |
| ATGAGCTCAGTCCAATAGGA+GGG | + | chr1_1:61825413-61825432 | Msa0033950:three_prime_UTR | 45.0% | |
| GGAATGTTCTTGTGGGCTTA+AGG | + | chr1_1:61825434-61825453 | Msa0033950:three_prime_UTR | 45.0% | |
| CTCTATGATCGAACCACAGC+AGG | - | chr1_1:61822820-61822839 | None:intergenic | 50.0% | |
| TTCCTCCGCCGGAAATCAAA+CGG | - | chr1_1:61822862-61822881 | None:intergenic | 50.0% | |
| CTAGCCGACCTAGAAAAGAC+CGG | + | chr1_1:61822956-61822975 | Msa0033950:CDS | 50.0% | |
| ! | TCCTCCGGTCTTTTCTAGGT+CGG | - | chr1_1:61822963-61822982 | None:intergenic | 50.0% |
| GCGATACCTCGAATGCATGA+TGG | - | chr1_1:61823087-61823106 | None:intergenic | 50.0% | |
| GTCGTTTAGGTGTCAGACAC+CGG | - | chr1_1:61823216-61823235 | None:intergenic | 50.0% | |
| AAATAAGCGTAGCCGAGACG+AGG | + | chr1_1:61823511-61823530 | Msa0033950:intron | 50.0% | |
| CCAACACAACATCCTCGTCT+CGG | - | chr1_1:61823526-61823545 | None:intergenic | 50.0% | |
| AGTACGGAGAGTAGACCAGA+TGG | + | chr1_1:61823677-61823696 | Msa0033950:intron | 50.0% | |
| ACCGTCGAAAGTTCCTCAGT+TGG | + | chr1_1:61824232-61824251 | Msa0033950:CDS | 50.0% | |
| ! | AGATAGCTCCGATTGGTCAC+CGG | - | chr1_1:61824599-61824618 | None:intergenic | 50.0% |
| CATGGACAAGGAAGCTGTGT+CGG | + | chr1_1:61824754-61824773 | Msa0033950:CDS | 50.0% | |
| GCTGCAGAGGACCTTTCTTT+AGG | + | chr1_1:61824798-61824817 | Msa0033950:CDS | 50.0% | |
| !! | TGGTGCTATGAGCCACTTAG+AGG | + | chr1_1:61824868-61824887 | Msa0033950:CDS | 50.0% |
| !! | ATCGCCGACTTCTGAAAGTG+CGG | - | chr1_1:61824894-61824913 | None:intergenic | 50.0% |
| GCACTTACAGCTTGTGGTGA+AGG | - | chr1_1:61824929-61824948 | None:intergenic | 50.0% | |
| ACTGCATCCGAATCATCTCC+TGG | + | chr1_1:61825055-61825074 | Msa0033950:CDS | 50.0% | |
| ATGGGTGCGGTGTGTATTCA+TGG | - | chr1_1:61825157-61825176 | None:intergenic | 50.0% | |
| CTGCATGAGCTCAGTCCAAT+AGG | + | chr1_1:61825409-61825428 | Msa0033950:three_prime_UTR | 50.0% | |
| CATGAGCTCAGTCCAATAGG+AGG | + | chr1_1:61825412-61825431 | Msa0033950:three_prime_UTR | 50.0% | |
| TGTTCTTGTGGGCTTAAGGC+AGG | + | chr1_1:61825438-61825457 | Msa0033950:three_prime_UTR | 50.0% | |
| TTGTGGGCTTAAGGCAGGAT+AGG | + | chr1_1:61825443-61825462 | Msa0033950:three_prime_UTR | 50.0% | |
| ! | TACGGCCGTTTGATTTCCGG+CGG | + | chr1_1:61822854-61822873 | Msa0033950:CDS | 55.0% |
| ! | GTTTGATTTCCGGCGGAGGA+AGG | + | chr1_1:61822861-61822880 | Msa0033950:CDS | 55.0% |
| GCTTCTCCGACGACTATGCA+CGG | + | chr1_1:61822883-61822902 | Msa0033950:CDS | 55.0% | |
| !! | GGTCGGCTAGTCTTCGGTAA+AGG | - | chr1_1:61822946-61822965 | None:intergenic | 55.0% |
| ! | CGGTTCCTCCGGTCTTTTCT+AGG | - | chr1_1:61822967-61822986 | None:intergenic | 55.0% |
| CTGGTTCAACGTCTGCGACA+CGG | - | chr1_1:61822987-61823006 | None:intergenic | 55.0% | |
| TGAACTCGAGAGATGCGTCC+AGG | + | chr1_1:61823039-61823058 | Msa0033950:CDS | 55.0% | |
| GTTCCGTGTCCAACACTTGC+CGG | + | chr1_1:61823194-61823213 | Msa0033950:intron | 55.0% | |
| !! | ACACCGGCAAGTGTTGGACA+CGG | - | chr1_1:61823200-61823219 | None:intergenic | 55.0% |
| TGTCAGACACCGGCAAGTGT+TGG | - | chr1_1:61823206-61823225 | None:intergenic | 55.0% | |
| CCGAGACGAGGATGTTGTGT+TGG | + | chr1_1:61823523-61823542 | Msa0033950:intron | 55.0% | |
| ACGGAGAGTAGACCAGATGG+AGG | + | chr1_1:61823680-61823699 | Msa0033950:intron | 55.0% | |
| ! | TGGTAAGTTTCGCGTTGGCG+CGG | - | chr1_1:61824497-61824516 | None:intergenic | 55.0% |
| CTGAGCCTTTATGCTGGGAC+TGG | + | chr1_1:61824524-61824543 | Msa0033950:CDS | 55.0% | |
| GACCCTCAAGAAGATCACCC+CGG | + | chr1_1:61824577-61824596 | Msa0033950:CDS | 55.0% | |
| CACCGGGGTGATCTTCTTGA+GGG | - | chr1_1:61824582-61824601 | None:intergenic | 55.0% | |
| TCACCGGGGTGATCTTCTTG+AGG | - | chr1_1:61824583-61824602 | None:intergenic | 55.0% | |
| AGATCACCCCGGTGACCAAT+CGG | + | chr1_1:61824588-61824607 | Msa0033950:CDS | 55.0% | |
| ! | ATAGCTCCGATTGGTCACCG+GGG | - | chr1_1:61824597-61824616 | None:intergenic | 55.0% |
| ! | GATAGCTCCGATTGGTCACC+GGG | - | chr1_1:61824598-61824617 | None:intergenic | 55.0% |
| !! | GTTGGTTGGTGTTGCAGTGC+AGG | + | chr1_1:61824715-61824734 | Msa0033950:CDS | 55.0% |
| ! | GGAAGCTGTGTCGGTCTTTG+AGG | + | chr1_1:61824763-61824782 | Msa0033950:CDS | 55.0% |
| GAAGCTCTCAAGAGCTGCAG+AGG | + | chr1_1:61824785-61824804 | Msa0033950:CDS | 55.0% | |
| ! | CTGAAAGTGCGGCCTCTAAG+TGG | - | chr1_1:61824883-61824902 | None:intergenic | 55.0% |
| GAGGCCGCACTTTCAGAAGT+CGG | + | chr1_1:61824887-61824906 | Msa0033950:CDS | 55.0% | |
| TCGCAGCCGTGCATAGTCGT+CGG | - | chr1_1:61822892-61822911 | None:intergenic | 60.0% | |
| ACGACTATGCACGGCTGCGA+CGG | + | chr1_1:61822892-61822911 | Msa0033950:CDS | 60.0% | |
| GCCGACCTAGAAAAGACCGG+AGG | + | chr1_1:61822959-61822978 | Msa0033950:CDS | 60.0% | |
| ! | GGCCGTTTGATTTCCGGCGG+AGG | + | chr1_1:61822857-61822876 | Msa0033950:CDS | 65.0% |
| TCGGAGAAGCCTTCCTCCGC+CGG | - | chr1_1:61822873-61822892 | None:intergenic | 65.0% | |
| CGTCTGCGACACGGTTCCTC+CGG | - | chr1_1:61822978-61822997 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 61822773 | 61825469 | 61822773 | ID=Msa0033950;Name=Msa0033950 |
| chr1_1 | mRNA | 61822773 | 61825469 | 61822773 | ID=Msa0033950-mRNA-1;Parent=Msa0033950;Name=Msa0033950-mRNA-1;_AED=0.23;_eAED=0.23;_QI=75|1|1|1|1|1|2|334|480 |
| chr1_1 | exon | 61822773 | 61823099 | 61822773 | ID=Msa0033950-mRNA-1:exon:19366;Parent=Msa0033950-mRNA-1 |
| chr1_1 | exon | 61823945 | 61825469 | 61823945 | ID=Msa0033950-mRNA-1:exon:19367;Parent=Msa0033950-mRNA-1 |
| chr1_1 | five_prime_UTR | 61822773 | 61822847 | 61822773 | ID=Msa0033950-mRNA-1:five_prime_utr;Parent=Msa0033950-mRNA-1 |
| chr1_1 | CDS | 61822848 | 61823099 | 61822848 | ID=Msa0033950-mRNA-1:cds;Parent=Msa0033950-mRNA-1 |
| chr1_1 | CDS | 61823945 | 61825135 | 61823945 | ID=Msa0033950-mRNA-1:cds;Parent=Msa0033950-mRNA-1 |
| chr1_1 | three_prime_UTR | 61825136 | 61825469 | 61825136 | ID=Msa0033950-mRNA-1:three_prime_utr;Parent=Msa0033950-mRNA-1 |
| Gene Sequence |
| Protein sequence |
