AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1130980

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1130980 MtrunA17_Chr7g0276201 99.165 479 4 0 1 479 1 479 0.0 973
Msa1130980 MtrunA17_Chr4g0026301 53.611 360 160 4 85 443 91 444 2.70e-140 412
Msa1130980 MtrunA17_Chr7g0266451 50.248 404 182 7 86 479 83 477 1.10e-131 389
Msa1130980 MtrunA17_Chr7g0217261 50.970 361 170 4 84 443 329 683 8.44e-125 379
Msa1130980 MtrunA17_Chr8g0372111 32.653 245 160 4 105 345 419 662 9.18e-38 147
Msa1130980 MtrunA17_Chr8g0335981 28.571 266 173 7 76 337 198 450 3.36e-32 130
Msa1130980 MtrunA17_Chr7g0250221 24.468 282 185 10 72 337 162 431 1.35e-18 89.0
Msa1130980 MtrunA17_Chr4g0068631 32.237 152 83 3 104 240 88 234 6.78e-17 83.6
Msa1130980 MtrunA17_Chr1g0153181 26.434 401 217 17 93 458 109 466 3.80e-16 81.3
Msa1130980 MtrunA17_Chr1g0153181 23.048 269 188 5 104 361 32 292 4.51e-15 77.8
Msa1130980 MtrunA17_Chr6g0465751 23.810 273 184 7 104 364 25 285 6.06e-15 77.4
Msa1130980 MtrunA17_Chr6g0466501 23.443 273 185 7 104 364 25 285 7.92e-15 77.0
Msa1130980 MtrunA17_Chr6g0466501 21.550 413 274 10 93 479 102 490 7.16e-11 64.7
Msa1130980 MtrunA17_Chr4g0044541 25.676 370 219 15 106 449 124 463 1.15e-14 76.6
Msa1130980 MtrunA17_Chr4g0044541 23.704 270 185 7 104 361 34 294 1.65e-14 76.3
Msa1130980 MtrunA17_Chr3g0133651 21.408 341 225 8 106 422 95 416 1.26e-14 75.9
Msa1130980 MtrunA17_Chr0c09g0493511 23.367 398 255 12 93 464 20 393 2.86e-14 75.1
Msa1130980 MtrunA17_Chr3g0134141 23.404 235 161 5 104 327 24 250 3.32e-14 75.1
Msa1130980 MtrunA17_Chr2g0328791 20.792 303 186 7 106 362 17 311 3.47e-14 74.3
Msa1130980 MtrunA17_Chr1g0153871 21.752 331 223 8 106 412 99 417 3.87e-14 74.3
Msa1130980 MtrunA17_Chr6g0449481 29.384 211 126 8 68 267 14 212 4.00e-14 73.9
Msa1130980 MtrunA17_Chr3g0120721 31.724 145 89 5 105 241 19 161 2.32e-13 71.2
Msa1130980 MtrunA17_Chr4g0074711 22.157 343 210 10 106 416 76 393 9.34e-13 69.7
Msa1130980 MtrunA17_Chr7g0219021 34.483 87 57 0 99 185 35 121 1.05e-12 68.2
Msa1130980 MtrunA17_Chr1g0201151 23.247 271 194 5 100 361 26 291 1.77e-12 69.7
Msa1130980 MtrunA17_Chr2g0288251 21.374 262 172 9 128 362 84 338 2.00e-12 68.9
Msa1130980 MtrunA17_Chr1g0168601 32.432 148 85 3 133 269 91 234 8.38e-12 65.1
Msa1130980 MtrunA17_Chr5g0447761 27.632 152 84 5 105 234 7 154 8.44e-12 67.0
Msa1130980 MtrunA17_Chr1g0201001 35.526 76 49 0 106 181 31 106 1.29e-11 67.0
Msa1130980 MtrunA17_Chr7g0268551 26.316 171 112 5 105 265 17 183 1.91e-11 65.9
Msa1130980 MtrunA17_Chr6g0465691 21.550 413 274 10 93 479 20 408 3.52e-11 65.5
Msa1130980 MtrunA17_Chr7g0263001 44.118 68 38 0 105 172 36 103 3.99e-11 60.8
Msa1130980 MtrunA17_Chr7g0265341 25.818 275 174 9 106 356 160 428 5.15e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1130980 AT4G00830.2 68.434 415 115 7 75 479 87 495 0.0 578
Msa1130980 AT4G00830.1 68.434 415 115 7 75 479 87 495 0.0 578
Msa1130980 AT4G00830.6 68.434 415 115 7 75 479 87 495 0.0 578
Msa1130980 AT4G00830.3 66.988 415 113 8 75 479 87 487 0.0 559
Msa1130980 AT4G00830.5 66.988 415 113 8 75 479 87 487 0.0 559
Msa1130980 AT4G00830.4 66.827 416 120 9 75 479 87 495 0.0 557
Msa1130980 AT3G52660.3 44.045 445 216 8 3 442 13 429 3.15e-118 355
Msa1130980 AT3G52660.1 44.045 445 216 8 3 442 13 429 3.15e-118 355
Msa1130980 AT3G52660.2 44.045 445 216 8 3 442 13 429 3.15e-118 355
Msa1130980 AT5G28390.1 38.889 198 62 6 247 442 1 141 7.23e-33 123
Msa1130980 AT2G44710.4 26.715 277 197 6 73 345 98 372 9.70e-28 117
Msa1130980 AT2G44710.2 26.715 277 197 6 73 345 183 457 1.23e-27 117
Msa1130980 AT2G44710.1 26.715 277 197 6 73 345 183 457 1.23e-27 117
Msa1130980 AT1G71770.1 27.719 285 170 8 106 362 148 424 1.59e-17 85.9
Msa1130980 AT1G71770.1 20.879 273 192 6 104 364 59 319 7.41e-13 71.2
Msa1130980 AT1G71770.2 27.719 285 170 8 106 362 148 424 1.59e-17 85.9
Msa1130980 AT1G71770.2 20.879 273 192 6 104 364 59 319 7.41e-13 71.2
Msa1130980 AT2G23350.1 26.410 390 225 17 106 458 136 500 4.55e-17 84.7
Msa1130980 AT2G23350.1 23.221 267 192 4 104 362 46 307 1.33e-14 77.0
Msa1130980 AT1G22760.1 27.778 288 166 10 106 362 138 414 1.24e-16 83.2
Msa1130980 AT1G49760.1 23.970 267 190 4 104 362 45 306 1.28e-16 83.2
Msa1130980 AT1G49760.1 26.075 372 214 15 106 449 135 473 8.20e-15 77.4
Msa1130980 AT1G49760.2 23.970 267 190 4 104 362 45 306 1.28e-16 83.2
Msa1130980 AT1G49760.2 26.075 372 214 15 106 449 135 473 8.20e-15 77.4
Msa1130980 AT4G34110.1 24.723 271 183 7 104 362 36 297 2.15e-16 82.4
Msa1130980 AT4G34110.1 27.907 387 202 18 106 458 126 469 1.63e-15 79.7
Msa1130980 AT5G19350.1 23.127 307 181 8 99 356 8 308 3.79e-15 77.8
Msa1130980 AT5G19350.2 22.112 303 185 7 99 356 8 304 6.91e-15 77.0
Msa1130980 AT2G36660.1 25.806 279 179 6 106 362 114 386 1.55e-14 76.6
Msa1130980 AT4G16280.3 31.973 147 86 4 105 240 121 264 5.55e-14 74.7
Msa1130980 AT4G16280.2 32.117 137 81 3 105 230 121 256 7.08e-14 74.7
Msa1130980 AT5G08695.1 27.273 253 164 7 106 340 229 479 7.68e-14 74.3
Msa1130980 AT4G16280.4 32.353 136 80 3 105 229 46 180 7.75e-14 74.3
Msa1130980 AT5G54900.1 21.767 317 193 10 105 384 61 359 1.04e-13 73.2
Msa1130980 AT3G13224.2 28.571 147 93 3 105 241 20 164 2.39e-13 71.6
Msa1130980 AT5G40490.1 28.655 171 110 5 105 267 43 209 2.86e-13 72.0
Msa1130980 AT2G33410.1 24.026 154 91 2 105 234 7 158 4.76e-13 71.2
Msa1130980 AT1G71800.1 33.051 118 67 2 106 223 11 116 5.00e-13 71.2
Msa1130980 AT3G13224.3 28.571 147 93 3 105 241 11 155 7.78e-13 70.1
Msa1130980 AT4G19610.1 24.710 259 157 8 106 337 296 543 1.96e-12 70.1
Msa1130980 AT1G60000.1 25.381 197 129 5 85 267 64 256 2.60e-12 67.4
Msa1130980 AT3G13224.1 29.252 147 92 4 105 241 20 164 2.65e-12 67.0
Msa1130980 AT3G16380.1 23.256 258 181 4 106 352 23 274 9.09e-12 67.8
Msa1130980 AT4G13850.4 39.726 73 44 0 104 176 35 107 4.93e-11 60.8
Msa1130980 AT3G23830.2 33.750 80 53 0 104 183 35 114 7.90e-11 60.5
Msa1130980 AT3G23830.1 33.750 80 53 0 104 183 35 114 7.90e-11 60.5
Msa1130980 AT4G13850.3 39.726 73 44 0 104 176 35 107 8.90e-11 60.5

Find 186 sgRNAs with CRISPR-Local

Find 457 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACTTCTCTGGAAATCTTTA+TGG 0.146801 7_3:-83297538 Msa1130980:CDS
ATCACATGGTTGTGTCTTCT+TGG 0.191780 7_3:-83297029 Msa1130980:three_prime_UTR
AGTAGAAAATTGTGTTAATT+TGG 0.197651 7_3:-83296796 Msa1130980:three_prime_UTR
CATGGGTCTGAAGTCTTTAT+TGG 0.210631 7_3:-83301326 Msa1130980:CDS
GCTTCAGGGAAACGTGATTT+TGG 0.232910 7_3:-83297995 Msa1130980:CDS
ATTTACCTCCTACCACTAAT+AGG 0.237446 7_3:+83297064 None:intergenic
TATACATAACAAGGAATTTA+AGG 0.244355 7_3:-83301036 Msa1130980:intron
TCCCTTCTTCTCATCAGTTC+AGG 0.274729 7_3:+83296949 None:intergenic
GACTGGTCAGGTGAGGTCTT+TGG 0.291173 7_3:+83300527 None:intergenic
CCGGTCATTTCTACGGGGTC+GGG 0.302448 7_3:+83297157 None:intergenic
GGCTCTGTAGGGGCTGGATA+TGG 0.316133 7_3:-83297517 Msa1130980:CDS
CTCAGGTATTTGACATAAAC+AGG 0.324627 7_3:+83301658 None:intergenic
ACTGGTCAGGTGAGGTCTTT+GGG 0.328446 7_3:+83300528 None:intergenic
CCTCGATGAGGAAAATTATA+TGG 0.332236 7_3:-83301594 Msa1130980:CDS
CTCTTTCTCTCTCTCTTCAA+AGG 0.341629 7_3:-83302601 Msa1130980:five_prime_UTR
ATGCCACCTGGCAAAGCTTC+AGG 0.345103 7_3:-83298010 Msa1130980:CDS
CCAGGCGGGCGTGGAGGAGG+TGG 0.345717 7_3:-83297125 Msa1130980:CDS
GGTGGTGTAGGGGTCCTTGA+GGG 0.352000 7_3:-83297008 Msa1130980:three_prime_UTR
TGTGTCTTCTTGGTGGTGTA+GGG 0.368817 7_3:-83297019 Msa1130980:three_prime_UTR
TGGTGTAGGGGTCCTTGAGG+GGG 0.372286 7_3:-83297006 Msa1130980:three_prime_UTR
ATTGAACAGCCAATGATATA+TGG 0.372369 7_3:-83297367 Msa1130980:intron
TTGTGTCTTCTTGGTGGTGT+AGG 0.376655 7_3:-83297020 Msa1130980:three_prime_UTR
GAAAATGTTAAGGTAGGATT+AGG 0.377395 7_3:-83296909 Msa1130980:three_prime_UTR
CCCGGTCATTTCTACGGGGT+CGG 0.380279 7_3:+83297156 None:intergenic
CATTTCCCCGGTCATTTCTA+CGG 0.383712 7_3:+83297150 None:intergenic
TGAAAGCATTGATCTCATAA+AGG 0.384681 7_3:-83300777 Msa1130980:intron
GGTCCAGGCGGGCGTGGAGG+AGG 0.385930 7_3:-83297128 Msa1130980:CDS
CTTCTTTCCCGTCCTCCTCA+TGG 0.386056 7_3:-83301344 Msa1130980:CDS
TGGTGGTGTAGGGGTCCTTG+AGG 0.387491 7_3:-83297009 Msa1130980:three_prime_UTR
ATACATGTGACGACGATGTC+AGG 0.391860 7_3:-83301289 Msa1130980:CDS
CGTTTCCCTGAAGCTTTGCC+AGG 0.391885 7_3:+83298004 None:intergenic
CCAGTCTGCTGCTGCTTCAC+AGG 0.392392 7_3:-83300510 Msa1130980:intron
TCTTTATTGGCGGACTTCCT+CGG 0.402355 7_3:-83301313 Msa1130980:CDS
CCTGGTTATGGTAACTTCTC+TGG 0.403154 7_3:-83297550 Msa1130980:CDS
CCAGGATGTGGAAGATGGTT+AGG 0.404372 7_3:+83297568 None:intergenic
GGAAATGGTCCAGGCGGGCG+TGG 0.407432 7_3:-83297134 Msa1130980:CDS
TTTCTACGGGGTCGGGGACC+TGG 0.410876 7_3:+83297164 None:intergenic
CATCTTCCACATCCTGGTTA+TGG 0.411894 7_3:-83297562 Msa1130980:CDS
TGCTGCTGCTGCTTATCAAC+AGG 0.412652 7_3:-83297488 Msa1130980:intron
GGAAATCTTTATGGCTCTGT+AGG 0.414546 7_3:-83297529 Msa1130980:CDS
CCACCTCCTCCACGCCCGCC+TGG 0.417952 7_3:+83297125 None:intergenic
TTCTTTCCCGTCCTCCTCAT+GGG 0.418722 7_3:-83301343 Msa1130980:CDS
CGTAGAAATGACCGGGGAAA+TGG 0.418861 7_3:-83297149 Msa1130980:CDS
GGTGTAGGGGTCCTTGAGGG+GGG 0.421376 7_3:-83297005 Msa1130980:three_prime_UTR
ACCAAACACAGGTTATTCAT+TGG 0.421589 7_3:-83300866 Msa1130980:CDS
CATGGACAGAGGATGAGTTT+AGG 0.422354 7_3:-83300829 Msa1130980:CDS
CTTTATTGGCGGACTTCCTC+GGG 0.429131 7_3:-83301312 Msa1130980:CDS
TTAATCAAAGACAGGGAGAC+TGG 0.429314 7_3:-83301125 Msa1130980:CDS
ATCTGCATTCCTGCTGGCAT+TGG 0.429710 7_3:+83297337 None:intergenic
GGCGGGCGTGGAGGAGGTGG+TGG 0.432818 7_3:-83297122 Msa1130980:CDS
CATCAGTTCAGGATTGAGAA+AGG 0.438101 7_3:+83296960 None:intergenic
GGAGGTTATGCGTACAATCC+TGG 0.438826 7_3:-83297598 Msa1130980:CDS
CAGTCAACAGCCTGGTGTAC+AGG 0.439586 7_3:-83297189 Msa1130980:CDS
ATTTCCCCGGTCATTTCTAC+GGG 0.439635 7_3:+83297151 None:intergenic
AATGGTCCAGGCGGGCGTGG+AGG 0.440125 7_3:-83297131 Msa1130980:CDS
CTTGTTATGTATATCATCAA+TGG 0.440341 7_3:+83301046 None:intergenic
GTGGTGTAGGGGTCCTTGAG+GGG 0.442584 7_3:-83297007 Msa1130980:three_prime_UTR
ATCCTGAACTGATGAGAAGA+AGG 0.444453 7_3:-83296951 Msa1130980:three_prime_UTR
TTTACCTCCTACCACTAATA+GGG 0.450615 7_3:+83297065 None:intergenic
TCTTTCTCTCTCTCTTCAAA+GGG 0.451006 7_3:-83302600 Msa1130980:five_prime_UTR
TCCTCTTCATCAATGAGAGC+TGG 0.454460 7_3:+83301386 None:intergenic
ACCAATGAATAACCTGTGTT+TGG 0.455471 7_3:+83300865 None:intergenic
TGTTCAGTAGTAACATTCTC+AGG 0.458986 7_3:+83298079 None:intergenic
GAAGATATCGACCCTATTAG+TGG 0.463195 7_3:-83297076 Msa1130980:exon
AGATTTGCTTGTGTTGTGTT+CGG 0.464946 7_3:+83302537 None:intergenic
GCCGTTGAGGGTGTTGGTCC+CGG 0.465967 7_3:-83300803 Msa1130980:CDS
GCCCGCCTGGACCATTTCCC+CGG 0.468739 7_3:+83297138 None:intergenic
ACATAGCCAATTCGACCATC+TGG 0.472814 7_3:+83297298 None:intergenic
TGCCACCTGGCAAAGCTTCA+GGG 0.476094 7_3:-83298009 Msa1130980:CDS
GAAATCTTTATGGCTCTGTA+GGG 0.476396 7_3:-83297528 Msa1130980:CDS
AGATTAAATTAATCAAAGAC+AGG 0.481330 7_3:-83301133 Msa1130980:CDS
GAGATCAATGCTTTCAACTC+CGG 0.481985 7_3:+83300784 None:intergenic
CGACCATCTGGTAAAACCAT+TGG 0.482813 7_3:+83297310 None:intergenic
GGAGGTGGTGGTAATGATGA+TGG 0.484593 7_3:-83297110 Msa1130980:CDS
TCTGCACCTTCTGACATGAT+TGG 0.485195 7_3:+83301635 None:intergenic
AGGAGCTATTTCGTCGTCAT+GGG 0.490593 7_3:-83298051 Msa1130980:CDS
AGTTGTTATTGCGAAGCCTC+AGG 0.490927 7_3:-83297638 Msa1130980:CDS
AAAATGTGAAGAAAATGTTA+AGG 0.492398 7_3:-83296919 Msa1130980:three_prime_UTR
GAAGCAGCAGCAGACTGGTC+AGG 0.493493 7_3:+83300515 None:intergenic
CTTTATGGCTCTGTAGGGGC+TGG 0.493827 7_3:-83297523 Msa1130980:CDS
AAGGAGCTATTTCGTCGTCA+TGG 0.495504 7_3:-83298052 Msa1130980:CDS
CGGTCATTTCTACGGGGTCG+GGG 0.495783 7_3:+83297158 None:intergenic
CAATAACAACTTCAAGAGCT+TGG 0.499467 7_3:+83297650 None:intergenic
AGGAAAGCCGTTGAGGGTGT+TGG 0.501756 7_3:-83300809 Msa1130980:CDS
GGAAAATTATATGGAAGAGA+TGG 0.503412 7_3:-83301585 Msa1130980:CDS
AACAAAGGAGGTGGCACAGA+AGG 0.503949 7_3:-83301069 Msa1130980:CDS
GAGGAGACAGCAGCAGAGGC+TGG 0.509710 7_3:-83301473 Msa1130980:CDS
TGTTACTACTGAACAACTAA+AGG 0.511831 7_3:-83298071 Msa1130980:CDS
GGGTCTGAAGTCTTTATTGG+CGG 0.513723 7_3:-83301323 Msa1130980:CDS
ACCAGCTCTCATTGATGAAG+AGG 0.515995 7_3:-83301387 Msa1130980:CDS
CAGGGAATTGTGTGAGCCCA+TGG 0.518448 7_3:-83301270 Msa1130980:CDS
CCTTCTGACATGATTGGCTC+AGG 0.518642 7_3:+83301641 None:intergenic
GGAACCATCTGCATTCCTGC+TGG 0.518900 7_3:+83297331 None:intergenic
TGTGAAGAAAATGTTAAGGT+AGG 0.519298 7_3:-83296915 Msa1130980:three_prime_UTR
AGATCAATGCTTTCAACTCC+GGG 0.521590 7_3:+83300785 None:intergenic
GGACCCCTACCATATATCAT+TGG 0.523074 7_3:+83297358 None:intergenic
TCTGACCAAAACACAAAATG+AGG 0.523169 7_3:+83302657 None:intergenic
CAGCCTGGTGTACAGGTGCC+AGG 0.525138 7_3:-83297182 Msa1130980:CDS
TTCAGACCCATGAGGAGGAC+GGG 0.525429 7_3:+83301337 None:intergenic
CCAGAGAAGTTACCATAACC+AGG 0.530505 7_3:+83297550 None:intergenic
ACAAAAGTGGTCATGCCACC+TGG 0.531745 7_3:-83298022 Msa1130980:CDS
AAGCAAGGGTTATGCATTCG+TGG 0.533835 7_3:-83301099 Msa1130980:CDS
ACATGGTTGTGTCTTCTTGG+TGG 0.535839 7_3:-83297026 Msa1130980:three_prime_UTR
CATAACCAGGATGTGGAAGA+TGG 0.536285 7_3:+83297563 None:intergenic
CCCGACCCCGTAGAAATGAC+CGG 0.536467 7_3:-83297157 Msa1130980:CDS
CAGGGAGACTGGAGAAAGCA+AGG 0.536934 7_3:-83301114 Msa1130980:CDS
CCTGTGAAGCAGCAGCAGAC+TGG 0.538416 7_3:+83300510 None:intergenic
AATAGAAATATCACTGGTCC+TGG 0.539313 7_3:+83296885 None:intergenic
CCTAACCATCTTCCACATCC+TGG 0.539820 7_3:-83297568 Msa1130980:CDS
GTGTCTTCTTGGTGGTGTAG+GGG 0.541281 7_3:-83297018 Msa1130980:three_prime_UTR
CCGACCCCGTAGAAATGACC+GGG 0.542279 7_3:-83297156 Msa1130980:CDS
GCTCATCTTCTTCAGCGCCA+TGG 0.544023 7_3:+83301414 None:intergenic
GACCTCAACAATATCACCCA+TGG 0.547750 7_3:+83301253 None:intergenic
TGTTGAAGAACACGAATATG+AGG 0.551736 7_3:-83301492 Msa1130980:CDS
ATAGATGACGATGGAGTGGA+TGG 0.552315 7_3:-83301542 Msa1130980:CDS
GAGTTTAGGAAAGCCGTTGA+GGG 0.552705 7_3:-83300815 Msa1130980:CDS
TTGTACGCATAACCTCCATC+AGG 0.553819 7_3:+83297604 None:intergenic
AATGACCGGGGAAATGGTCC+AGG 0.555766 7_3:-83297143 Msa1130980:CDS
ACCGGGGAAATGGTCCAGGC+GGG 0.557494 7_3:-83297139 Msa1130980:CDS
AAGTTACCATAACCAGGATG+TGG 0.557504 7_3:+83297556 None:intergenic
ACAGCCAATGATATATGGTA+GGG 0.557802 7_3:-83297362 Msa1130980:intron
ACGGAGAAATATGAAATTGA+CGG 0.559927 7_3:-83297923 Msa1130980:intron
GGTAGGGGTCCAATGCCAGC+AGG 0.561717 7_3:-83297346 Msa1130980:CDS
GGACCTGGCACCTGTACACC+AGG 0.562206 7_3:+83297179 None:intergenic
ATGTTCTGCAGTCAACAGCC+TGG 0.562438 7_3:-83297197 Msa1130980:intron
AGCAAGGGTTATGCATTCGT+GGG 0.564602 7_3:-83301098 Msa1130980:CDS
CATTGATGATATACATAACA+AGG 0.565385 7_3:-83301045 Msa1130980:CDS
AAATGATCGGTGAAGATGCA+AGG 0.567751 7_3:-83302716 None:intergenic
ATGCAAGGGTGCAAGTGAGA+AGG 0.569372 7_3:-83302701 Msa1130980:five_prime_UTR
GATGTGGAAGATGGTTAGGA+TGG 0.573494 7_3:+83297572 None:intergenic
AGGAATGCAGATGGTTCCAA+TGG 0.574457 7_3:-83297326 Msa1130980:CDS
CTTCAGACCCATGAGGAGGA+CGG 0.579525 7_3:+83301336 None:intergenic
TGCAAGTGAGAAGGAGCGCA+TGG 0.582204 7_3:-83302692 Msa1130980:five_prime_UTR
AGCAGCAGACTGGTCAGGTG+AGG 0.583616 7_3:+83300520 None:intergenic
TAACTTAATAGAAATATCAC+TGG 0.588772 7_3:+83296879 None:intergenic
AGATGGTTAGGATGGAGTCC+AGG 0.592860 7_3:+83297580 None:intergenic
AACAGCCAATGATATATGGT+AGG 0.595791 7_3:-83297363 Msa1130980:intron
GTATCACACCGACTGTCACA+TGG 0.596946 7_3:-83300556 Msa1130980:CDS
TCCTGAACTGATGAGAAGAA+GGG 0.597276 7_3:-83296950 Msa1130980:three_prime_UTR
GGGTTATAAAACAAAGGAGG+TGG 0.597805 7_3:-83301078 Msa1130980:CDS
TCCGGGACCAACACCCTCAA+CGG 0.598148 7_3:+83300802 None:intergenic
TTCCCTGAAGCTTTGCCAGG+TGG 0.598628 7_3:+83298007 None:intergenic
CAAAATCAAAGCAGAAATCG+TGG 0.602168 7_3:-83300662 Msa1130980:CDS
AGTGTGGGTTTCAAGCTAGA+TGG 0.603926 7_3:-83300578 Msa1130980:CDS
GGGTCAGCCCATGTGACAGT+CGG 0.604999 7_3:+83300548 None:intergenic
ACCTCAACAATATCACCCAT+GGG 0.606317 7_3:+83301254 None:intergenic
CGACAAAAGATGTCAAGTGT+GGG 0.606384 7_3:-83300593 Msa1130980:CDS
TACATGTGACGACGATGTCA+GGG 0.615488 7_3:-83301288 Msa1130980:CDS
AAATCTTTATGGCTCTGTAG+GGG 0.616942 7_3:-83297527 Msa1130980:CDS
ACGACAAAAGATGTCAAGTG+TGG 0.618953 7_3:-83300594 Msa1130980:CDS
ATATCGACCCTATTAGTGGT+AGG 0.620077 7_3:-83297072 Msa1130980:exon
TCATGGGGAAGTAACAAAAG+TGG 0.622137 7_3:-83298035 Msa1130980:CDS
ACAGATAGATGACGATGGAG+TGG 0.623025 7_3:-83301546 Msa1130980:CDS
GTTTCATTCATTATGCTGAG+AGG 0.624418 7_3:-83297973 Msa1130980:CDS
AGGGAGACTGGAGAAAGCAA+GGG 0.624475 7_3:-83301113 Msa1130980:CDS
CCTGAGCCAATCATGTCAGA+AGG 0.625578 7_3:-83301641 Msa1130980:exon
ATATGAGGAGACAGCAGCAG+AGG 0.629414 7_3:-83301477 Msa1130980:CDS
GATTAAATTAATCAAAGACA+GGG 0.629935 7_3:-83301132 Msa1130980:CDS
ATTCGTGGGTTATAAAACAA+AGG 0.634249 7_3:-83301084 Msa1130980:CDS
CAGCCAATGATATATGGTAG+GGG 0.638077 7_3:-83297361 Msa1130980:CDS
TCGACCCTATTAGTGGTAGG+AGG 0.638674 7_3:-83297069 Msa1130980:exon
GATGACGATGGAGTGGATGG+AGG 0.642481 7_3:-83301539 Msa1130980:CDS
TGAGTTTAGGAAAGCCGTTG+AGG 0.642754 7_3:-83300816 Msa1130980:CDS
ATTGAAAGCTGTAAAAGAGA+CGG 0.643889 7_3:-83297942 Msa1130980:CDS
AATGCCAGCAGGAATGCAGA+TGG 0.647935 7_3:-83297335 Msa1130980:CDS
GCCCATGGGTGATATTGTTG+AGG 0.648762 7_3:-83301255 Msa1130980:intron
GACCGGGGAAATGGTCCAGG+CGG 0.648958 7_3:-83297140 Msa1130980:CDS
AAAATCAAAGCAGAAATCGT+GGG 0.650895 7_3:-83300661 Msa1130980:CDS
AGAGATGGACGATGATGTTG+AGG 0.652385 7_3:-83301570 Msa1130980:CDS
AATGATCGGTGAAGATGCAA+GGG 0.653096 7_3:-83302715 None:intergenic
CGTGGGTTATAAAACAAAGG+AGG 0.655328 7_3:-83301081 Msa1130980:CDS
GGCGAAGATGAAAATGCTGA+AGG 0.655624 7_3:-83301518 Msa1130980:CDS
AGGGAATTGTGTGAGCCCAT+GGG 0.660365 7_3:-83301269 Msa1130980:CDS
ATGCAATGTGGCTCATCACA+TGG 0.661262 7_3:-83297043 Msa1130980:three_prime_UTR
CTGACCAAAACACAAAATGA+GGG 0.661882 7_3:+83302658 None:intergenic
GGAGCTATTTCGTCGTCATG+GGG 0.670970 7_3:-83298050 Msa1130980:CDS
TGCTGTCTGAAACCAAACAC+AGG 0.677613 7_3:-83300877 Msa1130980:CDS
TATCACACCGACTGTCACAT+GGG 0.679483 7_3:-83300555 Msa1130980:CDS
TCGTCGTCACATGTATCCCG+AGG 0.686914 7_3:+83301296 None:intergenic
GTTAAGGTAGGATTAGGACC+AGG 0.694530 7_3:-83296903 Msa1130980:three_prime_UTR
AAGACTTCAGACCCATGAGG+AGG 0.707032 7_3:+83301332 None:intergenic
TGAGCGTGTTGACCTCGATG+AGG 0.709115 7_3:-83301606 Msa1130980:CDS
GAGGAACAGATAGATGACGA+TGG 0.727620 7_3:-83301551 Msa1130980:CDS
GGTAGGAGGTAAATGCAATG+TGG 0.735908 7_3:-83297055 Msa1130980:three_prime_UTR
TTTCCCCGGTCATTTCTACG+GGG 0.740148 7_3:+83297152 None:intergenic
ATAAAGACTTCAGACCCATG+AGG 0.754876 7_3:+83301329 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAAAAAAAAT+TGG + chr7_3:83299578-83299597 None:intergenic 0.0%
!! AAAACATATATATACATATA+TGG + chr7_3:83297629-83297648 None:intergenic 10.0%
!!! TTATATCAATAATCTTATTT+TGG - chr7_3:83298378-83298397 Msa1130980:intron 10.0%
!! TTAAACAATTTAATATAAAC+TGG + chr7_3:83298610-83298629 None:intergenic 10.0%
!! TTTATTTATTAGTACAAAAA+GGG + chr7_3:83299380-83299399 None:intergenic 10.0%
!! ATTTATTTATTAGTACAAAA+AGG + chr7_3:83299381-83299400 None:intergenic 10.0%
!! GTACTAATAAATAAATAAAT+AGG - chr7_3:83299385-83299404 Msa1130980:intron 10.0%
!! AATATTAAAATTATTGTCAA+GGG + chr7_3:83300296-83300315 None:intergenic 10.0%
!! AATATTAAAATTATTGTCAA+GGG + chr7_3:83300296-83300315 None:intergenic 10.0%
!! GTATTATATCAAATAAAATA+AGG + chr7_3:83302102-83302121 None:intergenic 10.0%
!! AAAGTTATTCAATAAGATTT+AGG + chr7_3:83297426-83297445 None:intergenic 15.0%
!!! AACAATCTTTTCTTATATTT+AGG - chr7_3:83297502-83297521 Msa1130980:CDS 15.0%
!! CATATAATCATCAAATTTAT+GGG - chr7_3:83299250-83299269 Msa1130980:intron 15.0%
!!! CTCATTTTATATTTATGTAT+GGG - chr7_3:83299618-83299637 Msa1130980:intron 15.0%
!!! ATGATATAATTTTGTTTCTT+TGG - chr7_3:83300134-83300153 Msa1130980:intron 15.0%
!! GAATATTAAAATTATTGTCA+AGG + chr7_3:83300297-83300316 None:intergenic 15.0%
!! GAATATTAAAATTATTGTCA+AGG + chr7_3:83300297-83300316 None:intergenic 15.0%
!! AAATATAATAATCAATGAGA+AGG + chr7_3:83300759-83300778 None:intergenic 15.0%
!!! TTCATTGTTTTTACTAAATA+TGG - chr7_3:83301641-83301660 Msa1130980:exon 15.0%
!!! TTTGATTTGATTTGATTTGA+TGG + chr7_3:83296936-83296955 None:intergenic 20.0%
!! ATTGAATAACTTTATGTATC+TGG - chr7_3:83297433-83297452 Msa1130980:intron 20.0%
!!! TAAGAAAAGATTGTTTTTGT+AGG + chr7_3:83297497-83297516 None:intergenic 20.0%
!! AGATTAAATTAATCAAAGAC+AGG - chr7_3:83298204-83298223 Msa1130980:intron 20.0%
!! GATTAAATTAATCAAAGACA+GGG - chr7_3:83298205-83298224 Msa1130980:intron 20.0%
!! TATACATAACAAGGAATTTA+AGG - chr7_3:83298301-83298320 Msa1130980:intron 20.0%
!! CTTATTCATGATAATTACAT+TGG - chr7_3:83298347-83298366 Msa1130980:intron 20.0%
!!! TTTTGGTGATTACTTTTAAT+CGG - chr7_3:83298395-83298414 Msa1130980:intron 20.0%
!!! TTAACATTTTTCATGATATC+AGG - chr7_3:83298419-83298438 Msa1130980:intron 20.0%
!!! TAACATTTTTCATGATATCA+GGG - chr7_3:83298420-83298439 Msa1130980:intron 20.0%
!! AACAATTTAATATAAACTGG+TGG + chr7_3:83298607-83298626 None:intergenic 20.0%
!! GATATTTATTATTGTGACTT+AGG - chr7_3:83299096-83299115 Msa1130980:intron 20.0%
!! AATATGTAGATAAAAATCAG+AGG + chr7_3:83299129-83299148 None:intergenic 20.0%
!! GCATATAATCATCAAATTTA+TGG - chr7_3:83299249-83299268 Msa1130980:intron 20.0%
!!! TATGGGTTTTAAATATAAGA+TGG - chr7_3:83299267-83299286 Msa1130980:intron 20.0%
!! AATAAATAAATAGGGAATTC+TGG - chr7_3:83299394-83299413 Msa1130980:intron 20.0%
!! GATAATCTAACATTAGAAAA+AGG - chr7_3:83299435-83299454 Msa1130980:intron 20.0%
!! CCATACATAAATATAAAATG+AGG + chr7_3:83299620-83299639 None:intergenic 20.0%
!!! CCTCATTTTATATTTATGTA+TGG - chr7_3:83299617-83299636 Msa1130980:intron 20.0%
!!! ATATAATTTTGTTTCTTTGG+TGG - chr7_3:83300137-83300156 Msa1130980:intron 20.0%
!!! TCTCCTTTTTTTATTTTTTG+AGG - chr7_3:83300248-83300267 Msa1130980:intron 20.0%
!!! CTCCTTTTTTTATTTTTTGA+GGG - chr7_3:83300249-83300268 Msa1130980:intron 20.0%
!! TTCCCTCAAAAAATAAAAAA+AGG + chr7_3:83300254-83300273 None:intergenic 20.0%
!! GAAATTAGAAATATTATTGG+TGG + chr7_3:83300319-83300338 None:intergenic 20.0%
!! TGGGAAATTAGAAATATTAT+TGG + chr7_3:83300322-83300341 None:intergenic 20.0%
!! GAAATTAGAAATATTATTGG+TGG + chr7_3:83300319-83300338 None:intergenic 20.0%
!! GTGGAAATTAGAAATATTAT+TGG + chr7_3:83300573-83300592 None:intergenic 20.0%
!! ATTTAATATTGACAATCTGA+AGG + chr7_3:83300692-83300711 None:intergenic 20.0%
!! ACTAGTAAATTGCAATAATT+GGG - chr7_3:83301020-83301039 Msa1130980:intron 20.0%
!!! TTCGTATTTTACATGTTTTT+GGG - chr7_3:83301141-83301160 Msa1130980:intron 20.0%
!!! CTTTTGTTTTTGTTATTTTC+AGG - chr7_3:83301209-83301228 Msa1130980:intron 20.0%
!! AGTGATGAAAAATAACAATA+TGG - chr7_3:83301532-83301551 Msa1130980:CDS 20.0%
!! AAAATGTGAAGAAAATGTTA+AGG - chr7_3:83302418-83302437 Msa1130980:intron 20.0%
!! TAACTTAATAGAAATATCAC+TGG + chr7_3:83302461-83302480 None:intergenic 20.0%
!!! AAATTAACACAATTTTCTAC+TGG + chr7_3:83302542-83302561 None:intergenic 20.0%
!! AGTAGAAAATTGTGTTAATT+TGG - chr7_3:83302541-83302560 Msa1130980:five_prime_UTR 20.0%
! CGAAGAAATGAGATAAAAAA+GGG + chr7_3:83296982-83297001 None:intergenic 25.0%
!!! CCTTTTTTATCTCATTTCTT+CGG - chr7_3:83296980-83296999 Msa1130980:three_prime_UTR 25.0%
!!! CTTTTTTATCTCATTTCTTC+GGG - chr7_3:83296981-83297000 Msa1130980:three_prime_UTR 25.0%
!!! TTTTTTATCTCATTTCTTCG+GGG - chr7_3:83296982-83297001 Msa1130980:three_prime_UTR 25.0%
! ATAGTTAGACTTAGAAGAAT+TGG + chr7_3:83297039-83297058 None:intergenic 25.0%
! CCAAAAAAGATAGAAGAAAT+TGG + chr7_3:83297093-83297112 None:intergenic 25.0%
!!! CCAATTTCTTCTATCTTTTT+TGG - chr7_3:83297090-83297109 Msa1130980:CDS 25.0%
!!! TTCTTCTATCTTTTTTGGTA+TGG - chr7_3:83297095-83297114 Msa1130980:CDS 25.0%
!! TTTTATAGATTTCCATCACA+TGG - chr7_3:83297170-83297189 Msa1130980:CDS 25.0%
! AGAAAGGTTCATTTAAACAA+CGG + chr7_3:83297202-83297221 None:intergenic 25.0%
!!! TAGTTAGGGTATTTCATTTT+AGG - chr7_3:83297228-83297247 Msa1130980:intron 25.0%
!!! AGTTAGGGTATTTCATTTTA+GGG - chr7_3:83297229-83297248 Msa1130980:intron 25.0%
!!! TCATTTTAGGGTTTTACTTA+TGG - chr7_3:83297241-83297260 Msa1130980:intron 25.0%
!! AGTTAGCGAATTTTAAACAA+CGG + chr7_3:83297299-83297318 None:intergenic 25.0%
! AAAGGTTGAGAAATAGATAA+CGG + chr7_3:83297341-83297360 None:intergenic 25.0%
! CAAAATATAGTGAAATTACC+CGG + chr7_3:83297390-83297409 None:intergenic 25.0%
!!! TCTTTTCTTATATTTAGGAC+CGG - chr7_3:83297507-83297526 Msa1130980:CDS 25.0%
! GAATCTGTATTGTTAAATAG+CGG + chr7_3:83297607-83297626 None:intergenic 25.0%
!! CTTGTTATGTATATCATCAA+TGG + chr7_3:83298294-83298313 None:intergenic 25.0%
!! CATTGATGATATACATAACA+AGG - chr7_3:83298292-83298311 Msa1130980:intron 25.0%
! CTATAACAGACAAAAATGTT+TGG + chr7_3:83298649-83298668 None:intergenic 25.0%
!! CAAACATTTTTGTCTGTTAT+AGG - chr7_3:83298647-83298666 Msa1130980:intron 25.0%
! ATGTTTGATTGAGCATTTAT+AGG - chr7_3:83298927-83298946 Msa1130980:intron 25.0%
!! TTTTCCATAAAAATGATGAG+AGG - chr7_3:83299879-83299898 Msa1130980:intron 25.0%
! TTTCCATAAAAATGATGAGA+GGG - chr7_3:83299880-83299899 Msa1130980:intron 25.0%
! CAAAAATCGTAAATCAGATT+CGG + chr7_3:83299914-83299933 None:intergenic 25.0%
! ATAGAAAAATTGAGAATCGT+GGG + chr7_3:83300185-83300204 None:intergenic 25.0%
! AATAGAAAAATTGAGAATCG+TGG + chr7_3:83300186-83300205 None:intergenic 25.0%
! AATTATTGTCAAGGGAATAA+AGG + chr7_3:83300288-83300307 None:intergenic 25.0%
! TATAGAAAAATTGTGAATCG+CGG + chr7_3:83300373-83300392 None:intergenic 25.0%
! ACCTTAAACTAGGAATAATT+GGG + chr7_3:83300468-83300487 None:intergenic 25.0%
! AACCTTAAACTAGGAATAAT+TGG + chr7_3:83300469-83300488 None:intergenic 25.0%
! AAATGAAAGAACCTTAAACT+AGG + chr7_3:83300478-83300497 None:intergenic 25.0%
! AATTATTGTCAAGGGAATAA+AGG + chr7_3:83300288-83300307 None:intergenic 25.0%
!!! TCTATTCACTTTTGACTTAA+TGG - chr7_3:83300625-83300644 Msa1130980:CDS 25.0%
! AAAATTCATTGAACAGGTAA+AGG + chr7_3:83300943-83300962 None:intergenic 25.0%
! GAAACTAAAATTCATTGAAC+AGG + chr7_3:83300949-83300968 None:intergenic 25.0%
! GACTAGTAAATTGCAATAAT+TGG - chr7_3:83301019-83301038 Msa1130980:intron 25.0%
! CATAGAATGTGAATTTAATG+AGG - chr7_3:83301116-83301135 Msa1130980:CDS 25.0%
!! GTTCGTATTTTACATGTTTT+TGG - chr7_3:83301140-83301159 Msa1130980:intron 25.0%
!!! TCGTATTTTACATGTTTTTG+GGG - chr7_3:83301142-83301161 Msa1130980:intron 25.0%
!!! TTATTTTTCATCACTCAAAC+AGG + chr7_3:83301527-83301546 None:intergenic 25.0%
! CATTACAAGTAGAAAAAGTT+GGG + chr7_3:83302498-83302517 None:intergenic 25.0%
!! GTGTTTTTGTGAATTGAGAA+GGG + chr7_3:83296831-83296850 None:intergenic 30.0%
!! AGTGTTTTTGTGAATTGAGA+AGG + chr7_3:83296832-83296851 None:intergenic 30.0%
TTCTCAATTCACAAAAACAC+TGG - chr7_3:83296831-83296850 Msa1130980:three_prime_UTR 30.0%
CCGAAGAAATGAGATAAAAA+AGG + chr7_3:83296983-83297002 None:intergenic 30.0%
! TTTTTATCTCATTTCTTCGG+GGG - chr7_3:83296983-83297002 Msa1130980:three_prime_UTR 30.0%
! CTGAAAAGTGTGAATGAATA+CGG + chr7_3:83297144-83297163 None:intergenic 30.0%
GAAAGGTTCATTTAAACAAC+GGG + chr7_3:83297201-83297220 None:intergenic 30.0%
! AACCTTTCTTCTAGTTAGTT+AGG - chr7_3:83297213-83297232 Msa1130980:intron 30.0%
! ACCTTTCTTCTAGTTAGTTA+GGG - chr7_3:83297214-83297233 Msa1130980:intron 30.0%
!! TTTAGGGTTTTACTTATGGA+TGG - chr7_3:83297245-83297264 Msa1130980:intron 30.0%
! GTTAGCGAATTTTAAACAAC+GGG + chr7_3:83297298-83297317 None:intergenic 30.0%
ATAGCAGAATTGGAACAAAT+CGG + chr7_3:83297566-83297585 None:intergenic 30.0%
GGAAAATTATATGGAAGAGA+TGG - chr7_3:83297752-83297771 Msa1130980:intron 30.0%
! AAACTTTTCATTTCAGCGTA+GGG - chr7_3:83298137-83298156 Msa1130980:intron 30.0%
GTTGGGATTATTAACAAGTT+TGG - chr7_3:83298165-83298184 Msa1130980:intron 30.0%
! ATTCGTGGGTTATAAAACAA+AGG - chr7_3:83298253-83298272 Msa1130980:intron 30.0%
! TTGGTAACATTCCAAAAACA+TGG - chr7_3:83298490-83298509 Msa1130980:intron 30.0%
!! TGAAAGCATTGATCTCATAA+AGG - chr7_3:83298560-83298579 Msa1130980:intron 30.0%
CATTGATCTCATAAAGGTTT+GGG - chr7_3:83298566-83298585 Msa1130980:intron 30.0%
!! GATTTCTGCTTTGATTTTGA+GGG + chr7_3:83298674-83298693 None:intergenic 30.0%
AAAATCAAAGCAGAAATCGT+GGG - chr7_3:83298676-83298695 Msa1130980:intron 30.0%
TCAAACATTTGATGCAATGT+AGG + chr7_3:83298915-83298934 None:intergenic 30.0%
GAAAAAAGAAGAAAAAGAGC+AGG + chr7_3:83298972-83298991 None:intergenic 30.0%
TTGCAAATACCAATCAGTTT+AGG + chr7_3:83299011-83299030 None:intergenic 30.0%
AAATATCTCAAGCAGAAAAC+AGG + chr7_3:83299083-83299102 None:intergenic 30.0%
AGTCGTCAATTTGAGTAAAT+CGG - chr7_3:83299151-83299170 Msa1130980:intron 30.0%
ATTTGAGTAAATCGGAGATA+AGG - chr7_3:83299159-83299178 Msa1130980:intron 30.0%
! TAATGGATGAAAACTTGAAG+TGG - chr7_3:83299507-83299526 Msa1130980:intron 30.0%
AATGGATGAAAACTTGAAGT+GGG - chr7_3:83299508-83299527 Msa1130980:intron 30.0%
! CGAATCTGATTTACGATTTT+TGG - chr7_3:83299912-83299931 Msa1130980:intron 30.0%
AAGGAGAAAGAAATCTGATT+AGG + chr7_3:83300235-83300254 None:intergenic 30.0%
AACACGGATCGTAATATTAT+TGG + chr7_3:83300345-83300364 None:intergenic 30.0%
ATAGAAAAATTGTGAATCGC+GGG + chr7_3:83300372-83300391 None:intergenic 30.0%
AATGAATTGACATTAGCACA+TGG + chr7_3:83300668-83300687 None:intergenic 30.0%
AGAACAGGCAAAAAACAAAA+GGG + chr7_3:83300736-83300755 None:intergenic 30.0%
TATTTCCTTGTTAACTGATG+CGG - chr7_3:83300774-83300793 Msa1130980:intron 30.0%
ATGCTTTCGAATTTCAACAT+GGG + chr7_3:83301096-83301115 None:intergenic 30.0%
TGTTACTACTGAACAACTAA+AGG - chr7_3:83301266-83301285 Msa1130980:CDS 30.0%
ATTGAAAGCTGTAAAAGAGA+CGG - chr7_3:83301395-83301414 Msa1130980:CDS 30.0%
ACGGAGAAATATGAAATTGA+CGG - chr7_3:83301414-83301433 Msa1130980:CDS 30.0%
AAAAAACAGACAAACTTGCA+GGG + chr7_3:83301466-83301485 None:intergenic 30.0%
!!! TCTGTTTTTTCTTTCTTCGA+CGG - chr7_3:83301476-83301495 Msa1130980:CDS 30.0%
!!! TAATGTTTTAAGAGTGTCAC+TGG - chr7_3:83301584-83301603 Msa1130980:CDS 30.0%
! TTTTTATGTCTTTGAACTGC+AGG - chr7_3:83301664-83301683 Msa1130980:five_prime_UTR 30.0%
! AACTTCTCTGGAAATCTTTA+TGG - chr7_3:83301799-83301818 Msa1130980:intron 30.0%
TCTAATATGTTTGCATCTTG+TGG - chr7_3:83301934-83301953 Msa1130980:intron 30.0%
CTAATATGTTTGCATCTTGT+GGG - chr7_3:83301935-83301954 Msa1130980:intron 30.0%
ATTGAACAGCCAATGATATA+TGG - chr7_3:83301970-83301989 Msa1130980:intron 30.0%
!! CATGAGTTTTAACAACTTAC+AGG + chr7_3:83302065-83302084 None:intergenic 30.0%
GTTGTTAAAACTCATGTACA+TGG - chr7_3:83302069-83302088 Msa1130980:intron 30.0%
TGTGAAGAAAATGTTAAGGT+AGG - chr7_3:83302422-83302441 Msa1130980:intron 30.0%
GAAAATGTTAAGGTAGGATT+AGG - chr7_3:83302428-83302447 Msa1130980:intron 30.0%
GCATTACAAGTAGAAAAAGT+TGG + chr7_3:83302499-83302518 None:intergenic 30.0%
! CTTTTTCTACTTGTAATGCT+TGG - chr7_3:83302500-83302519 Msa1130980:intron 30.0%
AAAAATGAGCGACAAAAACA+TGG + chr7_3:83302581-83302600 None:intergenic 30.0%
CTGACCAAAACACAAAATGA+GGG + chr7_3:83296682-83296701 None:intergenic 35.0%
TCTGACCAAAACACAAAATG+AGG + chr7_3:83296683-83296702 None:intergenic 35.0%
TCTTTCTCTCTCTCTTCAAA+GGG - chr7_3:83296737-83296756 Msa1130980:three_prime_UTR 35.0%
! AGATTTGCTTGTGTTGTGTT+CGG + chr7_3:83296803-83296822 None:intergenic 35.0%
TCTTTCACTATCAACTCCTT+TGG - chr7_3:83297011-83297030 Msa1130980:three_prime_UTR 35.0%
CTTAGAAGAATTGGATCCAA+AGG + chr7_3:83297030-83297049 None:intergenic 35.0%
! AAAAGTGTGAATGAATACGG+AGG + chr7_3:83297141-83297160 None:intergenic 35.0%
ACCCTAACTAACTAGAAGAA+AGG + chr7_3:83297218-83297237 None:intergenic 35.0%
TAAACAACGGGCAATTGATA+GGG + chr7_3:83297286-83297305 None:intergenic 35.0%
TTAAACAACGGGCAATTGAT+AGG + chr7_3:83297287-83297306 None:intergenic 35.0%
! TTGAGAAATAGATAACGGTG+GGG + chr7_3:83297336-83297355 None:intergenic 35.0%
! GTTGAGAAATAGATAACGGT+GGG + chr7_3:83297337-83297356 None:intergenic 35.0%
TATAGTGAAATTACCCGGTA+TGG + chr7_3:83297385-83297404 None:intergenic 35.0%
CAATAAGATTTAGGAGCAGA+GGG + chr7_3:83297417-83297436 None:intergenic 35.0%
TCAATAAGATTTAGGAGCAG+AGG + chr7_3:83297418-83297437 None:intergenic 35.0%
! TTTCTTATATTTAGGACCGG+AGG - chr7_3:83297510-83297529 Msa1130980:CDS 35.0%
! TTCTTATATTTAGGACCGGA+GGG - chr7_3:83297511-83297530 Msa1130980:CDS 35.0%
!! TTGTTAAATAGCGGATACAG+CGG + chr7_3:83297598-83297617 None:intergenic 35.0%
CTCAGGTATTTGACATAAAC+AGG + chr7_3:83297682-83297701 None:intergenic 35.0%
! CCATATAATTTTCCTCATCG+AGG + chr7_3:83297746-83297765 None:intergenic 35.0%
CCTCGATGAGGAAAATTATA+TGG - chr7_3:83297743-83297762 Msa1130980:intron 35.0%
TGTTGAAGAACACGAATATG+AGG - chr7_3:83297845-83297864 Msa1130980:intron 35.0%
!!! TTTTTTCTCCTTCGGGAAAT+TGG + chr7_3:83297899-83297918 None:intergenic 35.0%
!!! ATGGTCACTTTTTTCTCCTT+CGG + chr7_3:83297907-83297926 None:intergenic 35.0%
! GAAACTTTTCATTTCAGCGT+AGG - chr7_3:83298136-83298155 Msa1130980:intron 35.0%
GATATCAGGGAAAAACTTTG+AGG - chr7_3:83298433-83298452 Msa1130980:intron 35.0%
ACCAAACACAGGTTATTCAT+TGG - chr7_3:83298471-83298490 Msa1130980:intron 35.0%
ACCAATGAATAACCTGTGTT+TGG + chr7_3:83298475-83298494 None:intergenic 35.0%
! GCATTGATCTCATAAAGGTT+TGG - chr7_3:83298565-83298584 Msa1130980:intron 35.0%
!! CGATTTCTGCTTTGATTTTG+AGG + chr7_3:83298675-83298694 None:intergenic 35.0%
CAAAATCAAAGCAGAAATCG+TGG - chr7_3:83298675-83298694 Msa1130980:intron 35.0%
! TGTGATTTTCTGGATGAATG+TGG - chr7_3:83298852-83298871 Msa1130980:intron 35.0%
GAAGAAAAAGAGCAGGAAAA+GGG + chr7_3:83298965-83298984 None:intergenic 35.0%
AGAAGAAAAAGAGCAGGAAA+AGG + chr7_3:83298966-83298985 None:intergenic 35.0%
GTAGATAAAAATCAGAGGCA+TGG + chr7_3:83299124-83299143 None:intergenic 35.0%
TTGTGATATGCCTTCACATA+GGG + chr7_3:83299194-83299213 None:intergenic 35.0%
GCATATCACAAGTTTATGTG+AGG - chr7_3:83299203-83299222 Msa1130980:intron 35.0%
!!! GACCTTTTGAAGTATGACTA+TGG - chr7_3:83299305-83299324 Msa1130980:intron 35.0%
CACCATAGTCATACTTCAAA+AGG + chr7_3:83299310-83299329 None:intergenic 35.0%
TTACAATAACCTGTCGATGT+AGG - chr7_3:83299476-83299495 Msa1130980:intron 35.0%
!!! TTGTTTTGAACCTTTTGACC+TGG - chr7_3:83299739-83299758 Msa1130980:intron 35.0%
AAAAAAACGAGAGCCACATT+CGG + chr7_3:83299862-83299881 None:intergenic 35.0%
!! CTTCCCTCTCATCATTTTTA+TGG + chr7_3:83299886-83299905 None:intergenic 35.0%
CGGATCGTAATATTATTGGT+GGG + chr7_3:83300341-83300360 None:intergenic 35.0%
ACGGATCGTAATATTATTGG+TGG + chr7_3:83300342-83300361 None:intergenic 35.0%
TTTCTATACCCAAGATCCTT+AGG - chr7_3:83300385-83300404 Msa1130980:intron 35.0%
AGATTTCACCTAAGGATCTT+GGG + chr7_3:83300396-83300415 None:intergenic 35.0%
ATGAGGGAAAAAATAGAGCA+TGG + chr7_3:83300431-83300450 None:intergenic 35.0%
TAAACTAGGAATAATTGGGC+AGG + chr7_3:83300464-83300483 None:intergenic 35.0%
GCCCAATTATTCCTAGTTTA+AGG - chr7_3:83300464-83300483 Msa1130980:intron 35.0%
AAGGAGAAAGAAATCTGACT+AGG + chr7_3:83300520-83300539 None:intergenic 35.0%
GTCAAAAGTGAATAGAAGAG+AGG + chr7_3:83300621-83300640 None:intergenic 35.0%
GAGAACAGGCAAAAAACAAA+AGG + chr7_3:83300737-83300756 None:intergenic 35.0%
TAATCAATGAGAAGGAGAAC+AGG + chr7_3:83300751-83300770 None:intergenic 35.0%
ATGCTAGAATCTATCACATG+CGG - chr7_3:83300882-83300901 Msa1130980:CDS 35.0%
CAGATAAAATTGCGAGACAA+GGG + chr7_3:83300981-83301000 None:intergenic 35.0%
GATGCTTTCGAATTTCAACA+TGG + chr7_3:83301097-83301116 None:intergenic 35.0%
TGTTCAGTAGTAACATTCTC+AGG + chr7_3:83301261-83301280 None:intergenic 35.0%
GTTTCATTCATTATGCTGAG+AGG - chr7_3:83301364-83301383 Msa1130980:CDS 35.0%
AAAAACAGACAAACTTGCAG+GGG + chr7_3:83301465-83301484 None:intergenic 35.0%
GAAAAAACAGACAAACTTGC+AGG + chr7_3:83301467-83301486 None:intergenic 35.0%
CAATAACAACTTCAAGAGCT+TGG + chr7_3:83301690-83301709 None:intergenic 35.0%
! GAAATCTTTATGGCTCTGTA+GGG - chr7_3:83301809-83301828 Msa1130980:intron 35.0%
! AAATCTTTATGGCTCTGTAG+GGG - chr7_3:83301810-83301829 Msa1130980:intron 35.0%
ACAACAGATATTTGCAAGTG+TGG - chr7_3:83301885-83301904 Msa1130980:intron 35.0%
AACAGCCAATGATATATGGT+AGG - chr7_3:83301974-83301993 Msa1130980:intron 35.0%
ACAGCCAATGATATATGGTA+GGG - chr7_3:83301975-83301994 Msa1130980:intron 35.0%
TTTACCTCCTACCACTAATA+GGG + chr7_3:83302275-83302294 None:intergenic 35.0%
ATTTACCTCCTACCACTAAT+AGG + chr7_3:83302276-83302295 None:intergenic 35.0%
AATAGAAATATCACTGGTCC+TGG + chr7_3:83302455-83302474 None:intergenic 35.0%
ATGCGACAACAAAAAGTCAA+GGG + chr7_3:83302621-83302640 None:intergenic 35.0%
! CACACCCTCATTTTGTGTTT+TGG - chr7_3:83296675-83296694 Msa1130980:three_prime_UTR 40.0%
CTCTTTCTCTCTCTCTTCAA+AGG - chr7_3:83296736-83296755 Msa1130980:three_prime_UTR 40.0%
! GGGTTTTACTTATGGATGGA+TGG - chr7_3:83297249-83297268 Msa1130980:intron 40.0%
! GGTTGAGAAATAGATAACGG+TGG + chr7_3:83297338-83297357 None:intergenic 40.0%
ATTACCCGGTATGGAATACT+AGG + chr7_3:83297376-83297395 None:intergenic 40.0%
TGATTAATGTGTGATCCTGC+AGG - chr7_3:83297650-83297669 Msa1130980:CDS 40.0%
ATAAACAGGTAAACACCTGC+AGG + chr7_3:83297668-83297687 None:intergenic 40.0%
CAAAAAGACCAATTTCCCGA+AGG - chr7_3:83297888-83297907 Msa1130980:intron 40.0%
!!! TGGTCACTTTTTTCTCCTTC+GGG + chr7_3:83297906-83297925 None:intergenic 40.0%
GAAGGAGAAAAAAGTGACCA+TGG - chr7_3:83297906-83297925 Msa1130980:intron 40.0%
ATAAAGACTTCAGACCCATG+AGG + chr7_3:83298011-83298030 None:intergenic 40.0%
! CATGGGTCTGAAGTCTTTAT+TGG - chr7_3:83298011-83298030 Msa1130980:CDS 40.0%
ACCTCAACAATATCACCCAT+GGG + chr7_3:83298086-83298105 None:intergenic 40.0%
TTAATCAAAGACAGGGAGAC+TGG - chr7_3:83298212-83298231 Msa1130980:intron 40.0%
! CGTGGGTTATAAAACAAAGG+AGG - chr7_3:83298256-83298275 Msa1130980:intron 40.0%
GGGTTATAAAACAAAGGAGG+TGG - chr7_3:83298259-83298278 Msa1130980:intron 40.0%
CATTCCAAAAACATGGACAG+AGG - chr7_3:83298497-83298516 Msa1130980:intron 40.0%
! TCATCCTCTGTCCATGTTTT+TGG + chr7_3:83298504-83298523 None:intergenic 40.0%
AGATCAATGCTTTCAACTCC+GGG + chr7_3:83298555-83298574 None:intergenic 40.0%
GAGATCAATGCTTTCAACTC+CGG + chr7_3:83298556-83298575 None:intergenic 40.0%
ACGACAAAAGATGTCAAGTG+TGG - chr7_3:83298743-83298762 Msa1130980:intron 40.0%
CGACAAAAGATGTCAAGTGT+GGG - chr7_3:83298744-83298763 Msa1130980:intron 40.0%
! TTCACAGGTGTGTGATTTTC+TGG - chr7_3:83298842-83298861 Msa1130980:intron 40.0%
! AATCAGTTTAGGTTCCACAG+GGG + chr7_3:83299000-83299019 None:intergenic 40.0%
! CAATCAGTTTAGGTTCCACA+GGG + chr7_3:83299001-83299020 None:intergenic 40.0%
GTTGCTTATTCCCTATGTGA+AGG - chr7_3:83299181-83299200 Msa1130980:intron 40.0%
CTTGTGATATGCCTTCACAT+AGG + chr7_3:83299195-83299214 None:intergenic 40.0%
TGAGGAATCATAGTGTTCTG+CGG - chr7_3:83299221-83299240 Msa1130980:intron 40.0%
CATCTCTCATACGTCGTTTA+GGG + chr7_3:83299816-83299835 None:intergenic 40.0%
TCATCTCTCATACGTCGTTT+AGG + chr7_3:83299817-83299836 None:intergenic 40.0%
GAGATTTCACCTAAGGATCT+TGG + chr7_3:83300397-83300416 None:intergenic 40.0%
CAAACTCGAGATTTCACCTA+AGG + chr7_3:83300404-83300423 None:intergenic 40.0%
AGGAATAATTGGGCAGGAAA+GGG + chr7_3:83300458-83300477 None:intergenic 40.0%
TAGGAATAATTGGGCAGGAA+AGG + chr7_3:83300459-83300478 None:intergenic 40.0%
AAAGTAACTTTGCAGCAGAG+TGG + chr7_3:83300592-83300611 None:intergenic 40.0%
CAAAACCGCATCAGTTAACA+AGG + chr7_3:83300782-83300801 None:intergenic 40.0%
! CTTGTTAACTGATGCGGTTT+TGG - chr7_3:83300780-83300799 Msa1130980:CDS 40.0%
TGTGATAGATTCTAGCATGC+AGG + chr7_3:83300880-83300899 None:intergenic 40.0%
GCAGATAAAATTGCGAGACA+AGG + chr7_3:83300982-83301001 None:intergenic 40.0%
TCATGGGGAAGTAACAAAAG+TGG - chr7_3:83301302-83301321 Msa1130980:CDS 40.0%
!!! GTTTTTTCTTTCTTCGACGG+AGG - chr7_3:83301479-83301498 Msa1130980:CDS 40.0%
!! AAGAGTGTCACTGGTCTTAT+TGG - chr7_3:83301593-83301612 Msa1130980:CDS 40.0%
!!! TCAGGTTTTTTTTCAGCCTG+AGG + chr7_3:83301718-83301737 None:intergenic 40.0%
CAGGCTGAAAAAAAACCTGA+TGG - chr7_3:83301718-83301737 Msa1130980:intron 40.0%
GCTGAAAAAAAACCTGATGG+AGG - chr7_3:83301721-83301740 Msa1130980:intron 40.0%
AAGTTACCATAACCAGGATG+TGG + chr7_3:83301784-83301803 None:intergenic 40.0%
! GGAAATCTTTATGGCTCTGT+AGG - chr7_3:83301808-83301827 Msa1130980:intron 40.0%
CAGCCAATGATATATGGTAG+GGG - chr7_3:83301976-83301995 Msa1130980:intron 40.0%
!! GTTCCAATGGTTTTACCAGA+TGG - chr7_3:83302024-83302043 Msa1130980:intron 40.0%
! GTTTTACCAGATGGTCGAAT+TGG - chr7_3:83302033-83302052 Msa1130980:intron 40.0%
GAAGATATCGACCCTATTAG+TGG - chr7_3:83302261-83302280 Msa1130980:intron 40.0%
ATATCGACCCTATTAGTGGT+AGG - chr7_3:83302265-83302284 Msa1130980:intron 40.0%
ATCACATGGTTGTGTCTTCT+TGG - chr7_3:83302308-83302327 Msa1130980:intron 40.0%
CATCAGTTCAGGATTGAGAA+AGG + chr7_3:83302380-83302399 None:intergenic 40.0%
ATCCTGAACTGATGAGAAGA+AGG - chr7_3:83302386-83302405 Msa1130980:intron 40.0%
TCCTGAACTGATGAGAAGAA+GGG - chr7_3:83302387-83302406 Msa1130980:intron 40.0%
CATGCGACAACAAAAAGTCA+AGG + chr7_3:83302622-83302641 None:intergenic 40.0%
TAGATTTCCATCACATGGCC+TGG - chr7_3:83297175-83297194 Msa1130980:CDS 45.0%
GTTCATTTAAACAACGGGCC+AGG + chr7_3:83297196-83297215 None:intergenic 45.0%
! AAATAGATAACGGTGGGGTG+GGG + chr7_3:83297331-83297350 None:intergenic 45.0%
! GAAATAGATAACGGTGGGGT+GGG + chr7_3:83297332-83297351 None:intergenic 45.0%
! AGAAATAGATAACGGTGGGG+TGG + chr7_3:83297333-83297352 None:intergenic 45.0%
AGCTGCCTAGTATTCCATAC+CGG - chr7_3:83297368-83297387 Msa1130980:intron 45.0%
ACGCAATTTAATGCTCCCTC+CGG + chr7_3:83297529-83297548 None:intergenic 45.0%
TCTGCACCTTCTGACATGAT+TGG + chr7_3:83297705-83297724 None:intergenic 45.0%
AGAGATGGACGATGATGTTG+AGG - chr7_3:83297767-83297786 Msa1130980:intron 45.0%
GAGGAACAGATAGATGACGA+TGG - chr7_3:83297786-83297805 Msa1130980:intron 45.0%
ACAGATAGATGACGATGGAG+TGG - chr7_3:83297791-83297810 Msa1130980:intron 45.0%
ATAGATGACGATGGAGTGGA+TGG - chr7_3:83297795-83297814 Msa1130980:intron 45.0%
GGCGAAGATGAAAATGCTGA+AGG - chr7_3:83297819-83297838 Msa1130980:intron 45.0%
ACCAGCTCTCATTGATGAAG+AGG - chr7_3:83297950-83297969 Msa1130980:CDS 45.0%
TCCTCTTCATCAATGAGAGC+TGG + chr7_3:83297954-83297973 None:intergenic 45.0%
! GGGTCTGAAGTCTTTATTGG+CGG - chr7_3:83298014-83298033 Msa1130980:CDS 45.0%
!! TCTTTATTGGCGGACTTCCT+CGG - chr7_3:83298024-83298043 Msa1130980:CDS 45.0%
ATACATGTGACGACGATGTC+AGG - chr7_3:83298048-83298067 Msa1130980:CDS 45.0%
TACATGTGACGACGATGTCA+GGG - chr7_3:83298049-83298068 Msa1130980:CDS 45.0%
GACCTCAACAATATCACCCA+TGG + chr7_3:83298087-83298106 None:intergenic 45.0%
TTTCAGCGTAGGGAACAAGT+TGG - chr7_3:83298147-83298166 Msa1130980:intron 45.0%
TTCAGCGTAGGGAACAAGTT+GGG - chr7_3:83298148-83298167 Msa1130980:intron 45.0%
AAGCAAGGGTTATGCATTCG+TGG - chr7_3:83298238-83298257 Msa1130980:intron 45.0%
AGCAAGGGTTATGCATTCGT+GGG - chr7_3:83298239-83298258 Msa1130980:intron 45.0%
! TGCTGTCTGAAACCAAACAC+AGG - chr7_3:83298460-83298479 Msa1130980:intron 45.0%
CATGGACAGAGGATGAGTTT+AGG - chr7_3:83298508-83298527 Msa1130980:intron 45.0%
TGAGTTTAGGAAAGCCGTTG+AGG - chr7_3:83298521-83298540 Msa1130980:intron 45.0%
GAGTTTAGGAAAGCCGTTGA+GGG - chr7_3:83298522-83298541 Msa1130980:intron 45.0%
AGTGTGGGTTTCAAGCTAGA+TGG - chr7_3:83298759-83298778 Msa1130980:intron 45.0%
! TATCACACCGACTGTCACAT+GGG - chr7_3:83298782-83298801 Msa1130980:intron 45.0%
!!! TCTTTTTTCATGACCCCCTG+TGG - chr7_3:83298983-83299002 Msa1130980:intron 45.0%
! ATCAGTTTAGGTTCCACAGG+GGG + chr7_3:83298999-83299018 None:intergenic 45.0%
! CCAATCAGTTTAGGTTCCAC+AGG + chr7_3:83299002-83299021 None:intergenic 45.0%
CCTGTGGAACCTAAACTGAT+TGG - chr7_3:83298999-83299018 Msa1130980:intron 45.0%
TATGTATGGGCTCTCTATCC+TGG - chr7_3:83299631-83299650 Msa1130980:intron 45.0%
AACGACGTATGAGAGATGAG+TGG - chr7_3:83299818-83299837 Msa1130980:intron 45.0%
!! TTTGTGCTGATTGCCGAATG+TGG - chr7_3:83299846-83299865 Msa1130980:intron 45.0%
CATGCAGGACAAAGAAGACT+TGG + chr7_3:83300865-83300884 None:intergenic 45.0%
TACTAGTCGACAAACATCGC+AGG + chr7_3:83301007-83301026 None:intergenic 45.0%
! TTGGGACTTTTGCAGAATGC+TGG - chr7_3:83301038-83301057 Msa1130980:CDS 45.0%
! AAGGAGCTATTTCGTCGTCA+TGG - chr7_3:83301285-83301304 Msa1130980:CDS 45.0%
! AGGAGCTATTTCGTCGTCAT+GGG - chr7_3:83301286-83301305 Msa1130980:CDS 45.0%
! GCTTCAGGGAAACGTGATTT+TGG - chr7_3:83301342-83301361 Msa1130980:CDS 45.0%
! AGTTGTTATTGCGAAGCCTC+AGG - chr7_3:83301699-83301718 Msa1130980:intron 45.0%
TTGTACGCATAACCTCCATC+AGG + chr7_3:83301736-83301755 None:intergenic 45.0%
GATGTGGAAGATGGTTAGGA+TGG + chr7_3:83301768-83301787 None:intergenic 45.0%
CATAACCAGGATGTGGAAGA+TGG + chr7_3:83301777-83301796 None:intergenic 45.0%
CATCTTCCACATCCTGGTTA+TGG - chr7_3:83301775-83301794 Msa1130980:intron 45.0%
CCAGAGAAGTTACCATAACC+AGG + chr7_3:83301790-83301809 None:intergenic 45.0%
CCTGGTTATGGTAACTTCTC+TGG - chr7_3:83301787-83301806 Msa1130980:intron 45.0%
GGACCCCTACCATATATCAT+TGG + chr7_3:83301982-83302001 None:intergenic 45.0%
AGGAATGCAGATGGTTCCAA+TGG - chr7_3:83302011-83302030 Msa1130980:intron 45.0%
CGACCATCTGGTAAAACCAT+TGG + chr7_3:83302030-83302049 None:intergenic 45.0%
ACATAGCCAATTCGACCATC+TGG + chr7_3:83302042-83302061 None:intergenic 45.0%
ATTTCCCCGGTCATTTCTAC+GGG + chr7_3:83302189-83302208 None:intergenic 45.0%
CATTTCCCCGGTCATTTCTA+CGG + chr7_3:83302190-83302209 None:intergenic 45.0%
GGTAGGAGGTAAATGCAATG+TGG - chr7_3:83302282-83302301 Msa1130980:intron 45.0%
ATGCAATGTGGCTCATCACA+TGG - chr7_3:83302294-83302313 Msa1130980:intron 45.0%
ACATGGTTGTGTCTTCTTGG+TGG - chr7_3:83302311-83302330 Msa1130980:intron 45.0%
!! TTGTGTCTTCTTGGTGGTGT+AGG - chr7_3:83302317-83302336 Msa1130980:intron 45.0%
!! TGTGTCTTCTTGGTGGTGTA+GGG - chr7_3:83302318-83302337 Msa1130980:intron 45.0%
TCCCTTCTTCTCATCAGTTC+AGG + chr7_3:83302391-83302410 None:intergenic 45.0%
GTTAAGGTAGGATTAGGACC+AGG - chr7_3:83302434-83302453 Msa1130980:intron 45.0%
!! TACTAATAAATAAATAAATA+GGG - chr7_3:83299386-83299405 Msa1130980:intron 5.0%
!!! ATTAAATTTAAGATTTATTA+AGG + chr7_3:83299997-83300016 None:intergenic 5.0%
! ATGCAAGGGTGCAAGTGAGA+AGG - chr7_3:83296636-83296655 Msa1130980:three_prime_UTR 50.0%
ACTAGGCAGCTGCATTGCAA+AGG + chr7_3:83297359-83297378 None:intergenic 50.0%
GCTGCCTAGTATTCCATACC+GGG - chr7_3:83297369-83297388 Msa1130980:intron 50.0%
GCGCTGTTGCATAGCAGAAT+TGG + chr7_3:83297576-83297595 None:intergenic 50.0%
! CCTTCTGACATGATTGGCTC+AGG + chr7_3:83297699-83297718 None:intergenic 50.0%
CCTGAGCCAATCATGTCAGA+AGG - chr7_3:83297696-83297715 Msa1130980:intron 50.0%
ATATGAGGAGACAGCAGCAG+AGG - chr7_3:83297860-83297879 Msa1130980:intron 50.0%
TTCTTTCCCGTCCTCCTCAT+GGG - chr7_3:83297994-83298013 Msa1130980:CDS 50.0%
AAGACTTCAGACCCATGAGG+AGG + chr7_3:83298008-83298027 None:intergenic 50.0%
!! CTTTATTGGCGGACTTCCTC+GGG - chr7_3:83298025-83298044 Msa1130980:CDS 50.0%
AGGGAATTGTGTGAGCCCAT+GGG - chr7_3:83298068-83298087 Msa1130980:CDS 50.0%
GCCCATGGGTGATATTGTTG+AGG - chr7_3:83298082-83298101 Msa1130980:CDS 50.0%
AGGGAGACTGGAGAAAGCAA+GGG - chr7_3:83298224-83298243 Msa1130980:intron 50.0%
AACAAAGGAGGTGGCACAGA+AGG - chr7_3:83298268-83298287 Msa1130980:intron 50.0%
! GTATCACACCGACTGTCACA+TGG - chr7_3:83298781-83298800 Msa1130980:intron 50.0%
ACTGGTCAGGTGAGGTCTTT+GGG + chr7_3:83298812-83298831 None:intergenic 50.0%
ACCTGTCGATGTAGGTTCGT+CGG - chr7_3:83299484-83299503 Msa1130980:intron 50.0%
CGATGTAGGTTCGTCGGTAA+TGG - chr7_3:83299490-83299509 Msa1130980:intron 50.0%
AGCACACATGTGCGAAAACC+AGG + chr7_3:83299652-83299671 None:intergenic 50.0%
!! GCAAGAGAAGAGCTCTGGAA+CGG + chr7_3:83299717-83299736 None:intergenic 50.0%
CAAACGCAAGAGAAGAGCTC+TGG + chr7_3:83299722-83299741 None:intergenic 50.0%
! GAACCTTTTGACCTGGTCTC+TGG - chr7_3:83299746-83299765 Msa1130980:intron 50.0%
TTGCCAGAGACCAGGTCAAA+AGG + chr7_3:83299752-83299771 None:intergenic 50.0%
GGAAATGTTTGCCAGAGACC+AGG + chr7_3:83299760-83299779 None:intergenic 50.0%
GAGAATCGTGGGACGTAACA+CGG + chr7_3:83300174-83300193 None:intergenic 50.0%
GGCAGGAAAGGGAGAAATGA+GGG + chr7_3:83300447-83300466 None:intergenic 50.0%
TAGTCGACAAACATCGCAGG+AGG + chr7_3:83301004-83301023 None:intergenic 50.0%
! GGAGCTATTTCGTCGTCATG+GGG - chr7_3:83301287-83301306 Msa1130980:CDS 50.0%
ACAAAAGTGGTCATGCCACC+TGG - chr7_3:83301315-83301334 Msa1130980:CDS 50.0%
GGAGGTTATGCGTACAATCC+TGG - chr7_3:83301739-83301758 Msa1130980:intron 50.0%
AGATGGTTAGGATGGAGTCC+AGG + chr7_3:83301760-83301779 None:intergenic 50.0%
CCAGGATGTGGAAGATGGTT+AGG + chr7_3:83301772-83301791 None:intergenic 50.0%
CCTAACCATCTTCCACATCC+TGG - chr7_3:83301769-83301788 Msa1130980:intron 50.0%
! TGCTGCTGCTGCTTATCAAC+AGG - chr7_3:83301849-83301868 Msa1130980:intron 50.0%
ATCTGCATTCCTGCTGGCAT+TGG + chr7_3:83302003-83302022 None:intergenic 50.0%
AATGCCAGCAGGAATGCAGA+TGG - chr7_3:83302002-83302021 Msa1130980:intron 50.0%
ATGTTCTGCAGTCAACAGCC+TGG - chr7_3:83302140-83302159 Msa1130980:intron 50.0%
TTTCCCCGGTCATTTCTACG+GGG + chr7_3:83302188-83302207 None:intergenic 50.0%
CGTAGAAATGACCGGGGAAA+TGG - chr7_3:83302188-83302207 Msa1130980:intron 50.0%
! GGAGGTGGTGGTAATGATGA+TGG - chr7_3:83302227-83302246 Msa1130980:intron 50.0%
TCGACCCTATTAGTGGTAGG+AGG - chr7_3:83302268-83302287 Msa1130980:intron 50.0%
!! GTGTCTTCTTGGTGGTGTAG+GGG - chr7_3:83302319-83302338 Msa1130980:intron 50.0%
! TGCAAGTGAGAAGGAGCGCA+TGG - chr7_3:83296645-83296664 Msa1130980:three_prime_UTR 55.0%
! TGAGCGTGTTGACCTCGATG+AGG - chr7_3:83297731-83297750 Msa1130980:intron 55.0%
GATGACGATGGAGTGGATGG+AGG - chr7_3:83297798-83297817 Msa1130980:intron 55.0%
GCTCATCTTCTTCAGCGCCA+TGG + chr7_3:83297926-83297945 None:intergenic 55.0%
CTTCTTTCCCGTCCTCCTCA+TGG - chr7_3:83297993-83298012 Msa1130980:CDS 55.0%
TTCAGACCCATGAGGAGGAC+GGG + chr7_3:83298003-83298022 None:intergenic 55.0%
CTTCAGACCCATGAGGAGGA+CGG + chr7_3:83298004-83298023 None:intergenic 55.0%
TCGTCGTCACATGTATCCCG+AGG + chr7_3:83298044-83298063 None:intergenic 55.0%
CAGGGAATTGTGTGAGCCCA+TGG - chr7_3:83298067-83298086 Msa1130980:CDS 55.0%
CAGGGAGACTGGAGAAAGCA+AGG - chr7_3:83298223-83298242 Msa1130980:intron 55.0%
! AGGAAAGCCGTTGAGGGTGT+TGG - chr7_3:83298528-83298547 Msa1130980:intron 55.0%
! GACTGGTCAGGTGAGGTCTT+TGG + chr7_3:83298813-83298832 None:intergenic 55.0%
ACCGACGAACCTACATCGAC+AGG + chr7_3:83299488-83299507 None:intergenic 55.0%
!! AAGAGCTCTGGAACGGCTGA+GGG + chr7_3:83299710-83299729 None:intergenic 55.0%
!! AAAGCGGATCGGTTTGGGCA+AGG + chr7_3:83299781-83299800 None:intergenic 55.0%
! GCTGCAAAGCGGATCGGTTT+GGG + chr7_3:83299786-83299805 None:intergenic 55.0%
TTCTGCGCTGCAAAGCGGAT+CGG + chr7_3:83299792-83299811 None:intergenic 55.0%
AGGGTTTCTGCGCTGCAAAG+CGG + chr7_3:83299797-83299816 None:intergenic 55.0%
GTGAATCGCGGGACGTAACA+CGG + chr7_3:83300361-83300380 None:intergenic 55.0%
GGGCAGGAAAGGGAGAAATG+AGG + chr7_3:83300448-83300467 None:intergenic 55.0%
ATGCCACCTGGCAAAGCTTC+AGG - chr7_3:83301327-83301346 Msa1130980:CDS 55.0%
TGCCACCTGGCAAAGCTTCA+GGG - chr7_3:83301328-83301347 Msa1130980:CDS 55.0%
TTCCCTGAAGCTTTGCCAGG+TGG + chr7_3:83301333-83301352 None:intergenic 55.0%
CGTTTCCCTGAAGCTTTGCC+AGG + chr7_3:83301336-83301355 None:intergenic 55.0%
! CTTTATGGCTCTGTAGGGGC+TGG - chr7_3:83301814-83301833 Msa1130980:intron 55.0%
GGAACCATCTGCATTCCTGC+TGG + chr7_3:83302009-83302028 None:intergenic 55.0%
CAGTCAACAGCCTGGTGTAC+AGG - chr7_3:83302148-83302167 Msa1130980:intron 55.0%
AATGACCGGGGAAATGGTCC+AGG - chr7_3:83302194-83302213 Msa1130980:intron 55.0%
ATGCATCAGATCCCCCCTCA+AGG + chr7_3:83302346-83302365 None:intergenic 55.0%
! AGATAACGGTGGGGTGGGGT+GGG + chr7_3:83297327-83297346 None:intergenic 60.0%
! TAGATAACGGTGGGGTGGGG+TGG + chr7_3:83297328-83297347 None:intergenic 60.0%
TCCGGGACCAACACCCTCAA+CGG + chr7_3:83298538-83298557 None:intergenic 60.0%
GGGTCAGCCCATGTGACAGT+CGG + chr7_3:83298792-83298811 None:intergenic 60.0%
! AGCAGCAGACTGGTCAGGTG+AGG + chr7_3:83298820-83298839 None:intergenic 60.0%
! GAAGCAGCAGCAGACTGGTC+AGG + chr7_3:83298825-83298844 None:intergenic 60.0%
CCTGTGAAGCAGCAGCAGAC+TGG + chr7_3:83298830-83298849 None:intergenic 60.0%
! CCAGTCTGCTGCTGCTTCAC+AGG - chr7_3:83298827-83298846 Msa1130980:intron 60.0%
!! GAAGAGCTCTGGAACGGCTG+AGG + chr7_3:83299711-83299730 None:intergenic 60.0%
CGCTGCAAAGCGGATCGGTT+TGG + chr7_3:83299787-83299806 None:intergenic 60.0%
GGCTCTGTAGGGGCTGGATA+TGG - chr7_3:83301820-83301839 Msa1130980:intron 60.0%
CGGTCATTTCTACGGGGTCG+GGG + chr7_3:83302182-83302201 None:intergenic 60.0%
CCGGTCATTTCTACGGGGTC+GGG + chr7_3:83302183-83302202 None:intergenic 60.0%
CCCGACCCCGTAGAAATGAC+CGG - chr7_3:83302180-83302199 Msa1130980:intron 60.0%
CCCGGTCATTTCTACGGGGT+CGG + chr7_3:83302184-83302203 None:intergenic 60.0%
CCGACCCCGTAGAAATGACC+GGG - chr7_3:83302181-83302200 Msa1130980:intron 60.0%
CGACCCCGTAGAAATGACCG+GGG - chr7_3:83302182-83302201 Msa1130980:intron 60.0%
! TGGTGGTGTAGGGGTCCTTG+AGG - chr7_3:83302328-83302347 Msa1130980:intron 60.0%
GGTGGTGTAGGGGTCCTTGA+GGG - chr7_3:83302329-83302348 Msa1130980:intron 60.0%
GTGGTGTAGGGGTCCTTGAG+GGG - chr7_3:83302330-83302349 Msa1130980:intron 60.0%
TGGTGTAGGGGTCCTTGAGG+GGG - chr7_3:83302331-83302350 Msa1130980:intron 60.0%
CAACGGGCCAGGCCATGTGA+TGG + chr7_3:83297185-83297204 None:intergenic 65.0%
GAGGAGACAGCAGCAGAGGC+TGG - chr7_3:83297864-83297883 Msa1130980:intron 65.0%
!! GCCGTTGAGGGTGTTGGTCC+CGG - chr7_3:83298534-83298553 Msa1130980:intron 65.0%
GGTAGGGGTCCAATGCCAGC+AGG - chr7_3:83301991-83302010 Msa1130980:intron 65.0%
CAGCCTGGTGTACAGGTGCC+AGG - chr7_3:83302155-83302174 Msa1130980:intron 65.0%
GGACCTGGCACCTGTACACC+AGG + chr7_3:83302161-83302180 None:intergenic 65.0%
TTTCTACGGGGTCGGGGACC+TGG + chr7_3:83302176-83302195 None:intergenic 65.0%
GACCGGGGAAATGGTCCAGG+CGG - chr7_3:83302197-83302216 Msa1130980:intron 65.0%
ACCGGGGAAATGGTCCAGGC+GGG - chr7_3:83302198-83302217 Msa1130980:intron 65.0%
GGTGTAGGGGTCCTTGAGGG+GGG - chr7_3:83302332-83302351 Msa1130980:intron 65.0%
AACGGTGGGGTGGGGTGGGT+GGG + chr7_3:83297323-83297342 None:intergenic 70.0%
TAACGGTGGGGTGGGGTGGG+TGG + chr7_3:83297324-83297343 None:intergenic 70.0%
GCCCGCCTGGACCATTTCCC+CGG + chr7_3:83302202-83302221 None:intergenic 70.0%
GGAAATGGTCCAGGCGGGCG+TGG - chr7_3:83302203-83302222 Msa1130980:intron 70.0%
AATGGTCCAGGCGGGCGTGG+AGG - chr7_3:83302206-83302225 Msa1130980:intron 70.0%
! GGTCCAGGCGGGCGTGGAGG+AGG - chr7_3:83302209-83302228 Msa1130980:intron 80.0%
! CCACCTCCTCCACGCCCGCC+TGG + chr7_3:83302215-83302234 None:intergenic 80.0%
! CCAGGCGGGCGTGGAGGAGG+TGG - chr7_3:83302212-83302231 Msa1130980:intron 80.0%
! GGCGGGCGTGGAGGAGGTGG+TGG - chr7_3:83302215-83302234 Msa1130980:intron 80.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 83296632 83302727 83296632 ID=Msa1130980;Name=Msa1130980
chr7_3 mRNA 83296632 83302727 83296632 ID=Msa1130980-mRNA-1;Parent=Msa1130980;Name=Msa1130980-mRNA-1;_AED=0.09;_eAED=0.09;_QI=257|1|1|1|1|1|9|447|479
chr7_3 exon 83296632 83297208 83296632 ID=Msa1130980-mRNA-1:exon:24772;Parent=Msa1130980-mRNA-1
chr7_3 exon 83297295 83297380 83297295 ID=Msa1130980-mRNA-1:exon:24771;Parent=Msa1130980-mRNA-1
chr7_3 exon 83297489 83297673 83297489 ID=Msa1130980-mRNA-1:exon:24770;Parent=Msa1130980-mRNA-1
chr7_3 exon 83297924 83298128 83297924 ID=Msa1130980-mRNA-1:exon:24769;Parent=Msa1130980-mRNA-1
chr7_3 exon 83300511 83300690 83300511 ID=Msa1130980-mRNA-1:exon:24768;Parent=Msa1130980-mRNA-1
chr7_3 exon 83300778 83300918 83300778 ID=Msa1130980-mRNA-1:exon:24767;Parent=Msa1130980-mRNA-1
chr7_3 exon 83301037 83301153 83301037 ID=Msa1130980-mRNA-1:exon:24766;Parent=Msa1130980-mRNA-1
chr7_3 exon 83301256 83301687 83301256 ID=Msa1130980-mRNA-1:exon:24765;Parent=Msa1130980-mRNA-1
chr7_3 exon 83302507 83302727 83302507 ID=Msa1130980-mRNA-1:exon:24764;Parent=Msa1130980-mRNA-1
chr7_3 five_prime_UTR 83302507 83302727 83302507 ID=Msa1130980-mRNA-1:five_prime_utr;Parent=Msa1130980-mRNA-1
chr7_3 five_prime_UTR 83301652 83301687 83301652 ID=Msa1130980-mRNA-1:five_prime_utr;Parent=Msa1130980-mRNA-1
chr7_3 CDS 83301256 83301651 83301256 ID=Msa1130980-mRNA-1:cds;Parent=Msa1130980-mRNA-1
chr7_3 CDS 83301037 83301153 83301037 ID=Msa1130980-mRNA-1:cds;Parent=Msa1130980-mRNA-1
chr7_3 CDS 83300778 83300918 83300778 ID=Msa1130980-mRNA-1:cds;Parent=Msa1130980-mRNA-1
chr7_3 CDS 83300511 83300690 83300511 ID=Msa1130980-mRNA-1:cds;Parent=Msa1130980-mRNA-1
chr7_3 CDS 83297924 83298128 83297924 ID=Msa1130980-mRNA-1:cds;Parent=Msa1130980-mRNA-1
chr7_3 CDS 83297489 83297673 83297489 ID=Msa1130980-mRNA-1:cds;Parent=Msa1130980-mRNA-1
chr7_3 CDS 83297295 83297380 83297295 ID=Msa1130980-mRNA-1:cds;Parent=Msa1130980-mRNA-1
chr7_3 CDS 83297079 83297208 83297079 ID=Msa1130980-mRNA-1:cds;Parent=Msa1130980-mRNA-1
chr7_3 three_prime_UTR 83296632 83297078 83296632 ID=Msa1130980-mRNA-1:three_prime_utr;Parent=Msa1130980-mRNA-1
Gene Sequence

>Msa1130980

ATGTCAGAAGGTGCAGAGATCGATGAGCGTGTTGACCTCGATGAGGAAAATTATATGGAAGAGATGGACGATGATGTTGAGGAACAGATAGATGACGATGGAGTGGATGGAGGCGAAGATGAAAATGCTGAAGGTAGTGTTGAAGAACACGAATATGAGGAGACAGCAGCAGAGGCTGGTCAAAAAGACCAATTTCCCGAAGGAGAAAAAAGTGACCATGGCGCTGAAGAAGATGAGCATAAACCAGCTCTCATTGATGAAGAGGAGAGAGAGAAGCATGATGAACTTCTTTCCCGTCCTCCTCATGGGTCTGAAGTCTTTATTGGCGGACTTCCTCGGGATACATGTGACGACGATGTCAGGGAATTGTGTGAGCCCATGGGTGATATTGTTGAGATTAAATTAATCAAAGACAGGGAGACTGGAGAAAGCAAGGGTTATGCATTCGTGGGTTATAAAACAAAGGAGGTGGCACAGAAGGCCATTGATGATATACATAACAAGGAATTTAAGGGAAAAACTTTGAGGTGTTTGCTGTCTGAAACCAAACACAGGTTATTCATTGGTAACATTCCAAAAACATGGACAGAGGATGAGTTTAGGAAAGCCGTTGAGGGTGTTGGTCCCGGAGTTGAAAGCATTGATCTCATAAAGGACCCTCAAAATCAAAGCAGAAATCGTGGGTTTGCTTTTGTTTTGTATTACAACAACGCATGTGCTGATTATTCACGACAAAAGATGTCAAGTGTGGGTTTCAAGCTAGATGGTATCACACCGACTGTCACATGGGCTGACCCAAAGACCTCACCTGACCAGTCTGCTGCTGCTTCACAGGTTAAAGCTCTATATGTGAAAAACATACCTGAGAATGTTACTACTGAACAACTAAAGGAGCTATTTCGTCGTCATGGGGAAGTAACAAAAGTGGTCATGCCACCTGGCAAAGCTTCAGGGAAACGTGATTTTGGTTTCATTCATTATGCTGAGAGGTCAAGTGCATTGAAAGCTGTAAAAGAGACGGAGAAATATGAAATTGACGGCCAAGCTCTTGAAGTTGTTATTGCGAAGCCTCAGGCTGAAAAAAAACCTGATGGAGGTTATGCGTACAATCCTGGACTCCATCCTAACCATCTTCCACATCCTGGTTATGGTAACTTCTCTGGAAATCTTTATGGCTCTGTAGGGGCTGGATATGGTGTTGCTGCTGCTGCTGCTTATCAACAGCCAATGATATATGGTAGGGGTCCAATGCCAGCAGGAATGCAGATGGTTCCAATGGTTTTACCAGATGGTCGAATTGGCTATGTCCTTCAACAGCCTGGTGTACAGGTGCCAGGTCCCCGACCCCGTAGAAATGACCGGGGAAATGGTCCAGGCGGGCGTGGAGGAGGTGGTGGTAATGATGATGGAAATCGTAATAGAAGATATCGACCCTATTAG
Protein sequence

>Msa1130980

MSEGAEIDERVDLDEENYMEEMDDDVEEQIDDDGVDGGEDENAEGSVEEHEYEETAAEAGQKDQFPEGEKSDHGAEEDEHKPALIDEEEREKHDELLSRPPHGSEVFIGGLPRDTCDDDVRELCEPMGDIVEIKLIKDRETGESKGYAFVGYKTKEVAQKAIDDIHNKEFKGKTLRCLLSETKHRLFIGNIPKTWTEDEFRKAVEGVGPGVESIDLIKDPQNQSRNRGFAFVLYYNNACADYSRQKMSSVGFKLDGITPTVTWADPKTSPDQSAAASQVKALYVKNIPENVTTEQLKELFRRHGEVTKVVMPPGKASGKRDFGFIHYAERSSALKAVKETEKYEIDGQALEVVIAKPQAEKKPDGGYAYNPGLHPNHLPHPGYGNFSGNLYGSVGAGYGVAAAAAYQQPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVQVPGPRPRRNDRGNGPGGRGGGGGNDDGNRNRRYRPY*