Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0898040 | XP_003620418.2 | 92.033 | 364 | 16 | 3 | 1 | 355 | 1 | 360 | 0.0 | 625 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0898040 | sp|Q9ZQF9|MBR1_ARATH | 51.786 | 112 | 52 | 1 | 246 | 355 | 593 | 704 | 1.25e-29 | 123 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0898040 | G7KMM3 | 92.033 | 364 | 16 | 3 | 1 | 355 | 1 | 360 | 0.0 | 625 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001450 | Msa0898040 | 0.846517 | 2.067282e-59 | -8.615850e-47 |
| Msa0003220 | Msa0898040 | 0.800084 | 1.701041e-48 | -8.615850e-47 |
| Msa0003700 | Msa0898040 | 0.824984 | 6.000493e-54 | -8.615850e-47 |
| Msa0003720 | Msa0898040 | 0.804670 | 1.932100e-49 | -8.615850e-47 |
| Msa0008090 | Msa0898040 | 0.807237 | 5.575919e-50 | -8.615850e-47 |
| Msa0027230 | Msa0898040 | 0.807459 | 5.003088e-50 | -8.615850e-47 |
| Msa0027890 | Msa0898040 | 0.813463 | 2.527614e-51 | -8.615850e-47 |
| Msa0029630 | Msa0898040 | 0.814170 | 1.765888e-51 | -8.615850e-47 |
| Msa0033880 | Msa0898040 | 0.807573 | 4.732973e-50 | -8.615850e-47 |
| Msa0041690 | Msa0898040 | 0.803805 | 2.925703e-49 | -8.615850e-47 |
| Msa0043980 | Msa0898040 | 0.803942 | 2.739731e-49 | -8.615850e-47 |
| Msa0046740 | Msa0898040 | 0.802740 | 4.860823e-49 | -8.615850e-47 |
| Msa0051020 | Msa0898040 | 0.811880 | 5.610725e-51 | -8.615850e-47 |
| Msa0062120 | Msa0898040 | 0.810258 | 1.260620e-50 | -8.615850e-47 |
| Msa0069330 | Msa0898040 | 0.855542 | 5.881765e-62 | -8.615850e-47 |
| Msa0079920 | Msa0898040 | 0.808175 | 3.524144e-50 | -8.615850e-47 |
| Msa0084080 | Msa0898040 | 0.815186 | 1.051983e-51 | -8.615850e-47 |
| Msa0090360 | Msa0898040 | 0.848481 | 5.964190e-60 | -8.615850e-47 |
| Msa0091610 | Msa0898040 | 0.811871 | 5.635689e-51 | -8.615850e-47 |
| Msa0101270 | Msa0898040 | 0.813453 | 2.540814e-51 | -8.615850e-47 |
| Msa0104550 | Msa0898040 | 0.858982 | 5.667423e-63 | -8.615850e-47 |
| Msa0609410 | Msa0898040 | -0.811850 | 5.694714e-51 | -8.615850e-47 |
| Msa0612960 | Msa0898040 | 0.810972 | 8.835701e-51 | -8.615850e-47 |
| Msa0615490 | Msa0898040 | 0.818121 | 2.312585e-52 | -8.615850e-47 |
| Msa0620230 | Msa0898040 | 0.805191 | 1.503438e-49 | -8.615850e-47 |
| Msa0625720 | Msa0898040 | 0.817586 | 3.054640e-52 | -8.615850e-47 |
| Msa0628420 | Msa0898040 | 0.801969 | 7.005846e-49 | -8.615850e-47 |
| Msa0642970 | Msa0898040 | 0.833702 | 4.582259e-56 | -8.615850e-47 |
| Msa0650050 | Msa0898040 | -0.804275 | 2.336321e-49 | -8.615850e-47 |
| Msa0663390 | Msa0898040 | 0.825775 | 3.899254e-54 | -8.615850e-47 |
| Msa0669520 | Msa0898040 | 0.811262 | 7.646198e-51 | -8.615850e-47 |
| Msa0677530 | Msa0898040 | 0.807496 | 4.913439e-50 | -8.615850e-47 |
| Msa0687020 | Msa0898040 | 0.853141 | 2.906528e-61 | -8.615850e-47 |
| Msa0689500 | Msa0898040 | 0.809408 | 1.920172e-50 | -8.615850e-47 |
| Msa0692840 | Msa0898040 | 0.816784 | 4.624737e-52 | -8.615850e-47 |
| Msa0698540 | Msa0898040 | 0.819921 | 9.008117e-53 | -8.615850e-47 |
| Msa0705390 | Msa0898040 | 0.804454 | 2.143573e-49 | -8.615850e-47 |
| Msa0709600 | Msa0898040 | 0.800400 | 1.467025e-48 | -8.615850e-47 |
| Msa0722020 | Msa0898040 | 0.808608 | 2.848635e-50 | -8.615850e-47 |
| Msa0737600 | Msa0898040 | 0.810600 | 1.063557e-50 | -8.615850e-47 |
| Msa0740510 | Msa0898040 | 0.801315 | 9.542623e-49 | -8.615850e-47 |
| Msa0752700 | Msa0898040 | 0.846701 | 1.841540e-59 | -8.615850e-47 |
| Msa0763020 | Msa0898040 | 0.821956 | 3.064008e-53 | -8.615850e-47 |
| Msa0763070 | Msa0898040 | 0.829267 | 5.664286e-55 | -8.615850e-47 |
| Msa0794970 | Msa0898040 | 0.846629 | 1.926615e-59 | -8.615850e-47 |
| Msa0806800 | Msa0898040 | 0.800320 | 1.523351e-48 | -8.615850e-47 |
| Msa0822310 | Msa0898040 | -0.805165 | 1.522728e-49 | -8.615850e-47 |
| Msa0831100 | Msa0898040 | 0.839425 | 1.596838e-57 | -8.615850e-47 |
| Msa0125450 | Msa0898040 | 0.816225 | 6.172410e-52 | -8.615850e-47 |
| Msa0125540 | Msa0898040 | 0.818985 | 1.472402e-52 | -8.615850e-47 |
| Msa0127850 | Msa0898040 | 0.801274 | 9.728547e-49 | -8.615850e-47 |
| Msa0137840 | Msa0898040 | 0.849487 | 3.133200e-60 | -8.615850e-47 |
| Msa0144360 | Msa0898040 | 0.813801 | 2.129841e-51 | -8.615850e-47 |
| Msa0145580 | Msa0898040 | 0.821993 | 3.004189e-53 | -8.615850e-47 |
| Msa0146280 | Msa0898040 | 0.815025 | 1.142063e-51 | -8.615850e-47 |
| Msa0147980 | Msa0898040 | 0.800931 | 1.143143e-48 | -8.615850e-47 |
| Msa0150570 | Msa0898040 | 0.837955 | 3.830284e-57 | -8.615850e-47 |
| Msa0169610 | Msa0898040 | 0.833442 | 5.321176e-56 | -8.615850e-47 |
| Msa0173800 | Msa0898040 | 0.846468 | 2.132078e-59 | -8.615850e-47 |
| Msa0174000 | Msa0898040 | 0.800528 | 1.381875e-48 | -8.615850e-47 |
| Msa0183900 | Msa0898040 | 0.801866 | 7.355290e-49 | -8.615850e-47 |
| Msa0184040 | Msa0898040 | 0.848262 | 6.854711e-60 | -8.615850e-47 |
| Msa0199880 | Msa0898040 | 0.820372 | 7.102705e-53 | -8.615850e-47 |
| Msa0204960 | Msa0898040 | 0.809212 | 2.115815e-50 | -8.615850e-47 |
| Msa0209500 | Msa0898040 | 0.804693 | 1.911395e-49 | -8.615850e-47 |
| Msa0212930 | Msa0898040 | 0.837178 | 6.058207e-57 | -8.615850e-47 |
| Msa0217670 | Msa0898040 | 0.809655 | 1.699529e-50 | -8.615850e-47 |
| Msa0226540 | Msa0898040 | 0.801282 | 9.691082e-49 | -8.615850e-47 |
| Msa0369450 | Msa0898040 | 0.810634 | 1.045692e-50 | -8.615850e-47 |
| Msa0376350 | Msa0898040 | 0.805510 | 1.289181e-49 | -8.615850e-47 |
| Msa0376910 | Msa0898040 | 0.813279 | 2.774496e-51 | -8.615850e-47 |
| Msa0378970 | Msa0898040 | 0.818482 | 1.916009e-52 | -8.615850e-47 |
| Msa0380300 | Msa0898040 | 0.819274 | 1.265868e-52 | -8.615850e-47 |
| Msa0382310 | Msa0898040 | 0.802307 | 5.968963e-49 | -8.615850e-47 |
| Msa0382370 | Msa0898040 | 0.807982 | 3.873791e-50 | -8.615850e-47 |
| Msa0385500 | Msa0898040 | 0.806676 | 7.328216e-50 | -8.615850e-47 |
| Msa0387730 | Msa0898040 | 0.807248 | 5.545170e-50 | -8.615850e-47 |
| Msa0388700 | Msa0898040 | 0.808656 | 2.782875e-50 | -8.615850e-47 |
| Msa0395820 | Msa0898040 | 0.802776 | 4.779106e-49 | -8.615850e-47 |
| Msa0406770 | Msa0898040 | 0.815184 | 1.053000e-51 | -8.615850e-47 |
| Msa0424790 | Msa0898040 | 0.814478 | 1.509289e-51 | -8.615850e-47 |
| Msa0450400 | Msa0898040 | -0.809605 | 1.741880e-50 | -8.615850e-47 |
| Msa0456880 | Msa0898040 | 0.800006 | 1.764359e-48 | -8.615850e-47 |
| Msa0471900 | Msa0898040 | 0.807733 | 4.376357e-50 | -8.615850e-47 |
| Msa0481530 | Msa0898040 | 0.830301 | 3.172665e-55 | -8.615850e-47 |
| Msa0481970 | Msa0898040 | 0.801160 | 1.026466e-48 | -8.615850e-47 |
| Msa0241830 | Msa0898040 | 0.810023 | 1.416473e-50 | -8.615850e-47 |
| Msa0242230 | Msa0898040 | 0.804412 | 2.187372e-49 | -8.615850e-47 |
| Msa0249860 | Msa0898040 | 0.809409 | 1.919575e-50 | -8.615850e-47 |
| Msa0253200 | Msa0898040 | 0.826169 | 3.143932e-54 | -8.615850e-47 |
| Msa0257490 | Msa0898040 | 0.829406 | 5.239214e-55 | -8.615850e-47 |
| Msa0259240 | Msa0898040 | 0.827537 | 1.481401e-54 | -8.615850e-47 |
| Msa0264150 | Msa0898040 | 0.802488 | 5.479033e-49 | -8.615850e-47 |
| Msa0265340 | Msa0898040 | 0.823576 | 1.286234e-53 | -8.615850e-47 |
| Msa0281530 | Msa0898040 | 0.820795 | 5.677960e-53 | -8.615850e-47 |
| Msa0287790 | Msa0898040 | 0.803360 | 3.618897e-49 | -8.615850e-47 |
| Msa0292030 | Msa0898040 | 0.825815 | 3.815632e-54 | -8.615850e-47 |
| Msa0294160 | Msa0898040 | 0.801743 | 7.798191e-49 | -8.615850e-47 |
| Msa0296790 | Msa0898040 | 0.831482 | 1.628050e-55 | -8.615850e-47 |
| Msa0311720 | Msa0898040 | 0.836031 | 1.187581e-56 | -8.615850e-47 |
| Msa0318700 | Msa0898040 | 0.811868 | 5.644593e-51 | -8.615850e-47 |
| Msa0320590 | Msa0898040 | 0.816546 | 5.229322e-52 | -8.615850e-47 |
| Msa0330310 | Msa0898040 | 0.816414 | 5.598290e-52 | -8.615850e-47 |
| Msa0336290 | Msa0898040 | 0.839466 | 1.558220e-57 | -8.615850e-47 |
| Msa0339910 | Msa0898040 | 0.827321 | 1.669060e-54 | -8.615850e-47 |
| Msa0360210 | Msa0898040 | 0.816119 | 6.515647e-52 | -8.615850e-47 |
| Msa0363640 | Msa0898040 | 0.804096 | 2.545406e-49 | -8.615850e-47 |
| Msa0363790 | Msa0898040 | 0.807319 | 5.357570e-50 | -8.615850e-47 |
| Msa0484740 | Msa0898040 | 0.803817 | 2.908134e-49 | -8.615850e-47 |
| Msa0491000 | Msa0898040 | 0.808389 | 3.171991e-50 | -8.615850e-47 |
| Msa0511770 | Msa0898040 | 0.803803 | 2.927811e-49 | -8.615850e-47 |
| Msa0520270 | Msa0898040 | 0.802225 | 6.205134e-49 | -8.615850e-47 |
| Msa0524500 | Msa0898040 | 0.862336 | 5.445376e-64 | -8.615850e-47 |
| Msa0529890 | Msa0898040 | 0.817114 | 3.900609e-52 | -8.615850e-47 |
| Msa0531250 | Msa0898040 | 0.806658 | 7.393576e-50 | -8.615850e-47 |
| Msa0542290 | Msa0898040 | 0.844494 | 7.303805e-59 | -8.615850e-47 |
| Msa0547160 | Msa0898040 | 0.845131 | 4.918370e-59 | -8.615850e-47 |
| Msa0547990 | Msa0898040 | 0.805125 | 1.552122e-49 | -8.615850e-47 |
| Msa0556060 | Msa0898040 | 0.855258 | 7.117296e-62 | -8.615850e-47 |
| Msa0558230 | Msa0898040 | 0.806452 | 8.171635e-50 | -8.615850e-47 |
| Msa0572840 | Msa0898040 | 0.841038 | 6.052984e-58 | -8.615850e-47 |
| Msa0574390 | Msa0898040 | 0.800927 | 1.145177e-48 | -8.615850e-47 |
| Msa0581110 | Msa0898040 | 0.844549 | 7.059057e-59 | -8.615850e-47 |
| Msa0585560 | Msa0898040 | 0.821026 | 5.025231e-53 | -8.615850e-47 |
| Msa0844570 | Msa0898040 | 0.813415 | 2.588990e-51 | -8.615850e-47 |
| Msa0872440 | Msa0898040 | 0.805215 | 1.486639e-49 | -8.615850e-47 |
| Msa0880450 | Msa0898040 | 0.811638 | 6.333577e-51 | -8.615850e-47 |
| Msa0898040 | Msa0898760 | 0.815257 | 1.014046e-51 | -8.615850e-47 |
| Msa0898040 | Msa0903780 | 0.813535 | 2.436612e-51 | -8.615850e-47 |
| Msa0898040 | Msa0924470 | 0.887545 | 1.299083e-72 | -8.615850e-47 |
| Msa0898040 | Msa0930860 | 0.823584 | 1.280044e-53 | -8.615850e-47 |
| Msa0898040 | Msa0934140 | 0.800089 | 1.697535e-48 | -8.615850e-47 |
| Msa0898040 | Msa0943170 | 0.818780 | 1.639364e-52 | -8.615850e-47 |
| Msa0898040 | Msa0944680 | 0.811265 | 7.634179e-51 | -8.615850e-47 |
| Msa0898040 | Msa0963270 | 0.802846 | 4.622341e-49 | -8.615850e-47 |
| Msa0898040 | Msa0980880 | 0.801558 | 8.508889e-49 | -8.615850e-47 |
| Msa0898040 | Msa0997970 | 0.831880 | 1.299161e-55 | -8.615850e-47 |
| Msa0898040 | Msa1002960 | 0.840657 | 7.617944e-58 | -8.615850e-47 |
| Msa0898040 | Msa1009750 | 0.815310 | 9.872889e-52 | -8.615850e-47 |
| Msa0898040 | Msa1024750 | 0.808427 | 3.113819e-50 | -8.615850e-47 |
| Msa0898040 | Msa1029070 | 0.822759 | 1.994184e-53 | -8.615850e-47 |
| Msa0898040 | Msa1041670 | 0.819135 | 1.361232e-52 | -8.615850e-47 |
| Msa0898040 | Msa1050910 | 0.802799 | 4.725950e-49 | -8.615850e-47 |
| Msa0898040 | Msa1058750 | 0.801317 | 9.531316e-49 | -8.615850e-47 |
| Msa0898040 | Msa1059960 | 0.817217 | 3.697526e-52 | -8.615850e-47 |
| Msa0898040 | Msa1078170 | 0.821547 | 3.810199e-53 | -8.615850e-47 |
| Msa0898040 | Msa1080270 | 0.808477 | 3.038477e-50 | -8.615850e-47 |
| Msa0898040 | Msa1081930 | 0.805654 | 1.202415e-49 | -8.615850e-47 |
| Msa0898040 | Msa1087480 | 0.813701 | 2.240316e-51 | -8.615850e-47 |
| Msa0898040 | Msa1093840 | 0.812063 | 5.117984e-51 | -8.615850e-47 |
| Msa0898040 | Msa1097820 | 0.817857 | 2.652602e-52 | -8.615850e-47 |
| Msa0898040 | Msa1102220 | 0.802214 | 6.238554e-49 | -8.615850e-47 |
| Msa0898040 | Msa1105160 | 0.817603 | 3.026809e-52 | -8.615850e-47 |
| Msa0898040 | Msa1106700 | 0.820417 | 6.936123e-53 | -8.615850e-47 |
| Msa0898040 | Msa1123350 | 0.815391 | 9.467498e-52 | -8.615850e-47 |
| Msa0898040 | Msa1126830 | 0.842778 | 2.100770e-58 | -8.615850e-47 |
| Msa0898040 | Msa1128600 | 0.841979 | 3.421400e-58 | -8.615850e-47 |
| Msa0898040 | Msa1130980 | 0.838219 | 3.274147e-57 | -8.615850e-47 |
| Msa0898040 | Msa1156160 | 0.827884 | 1.222248e-54 | -8.615850e-47 |
| Msa0898040 | Msa1158570 | 0.811688 | 6.177737e-51 | -8.615850e-47 |
| Msa0898040 | Msa1165780 | 0.808653 | 2.786160e-50 | -8.615850e-47 |
| Msa0898040 | Msa1165940 | 0.828017 | 1.135896e-54 | -8.615850e-47 |
| Msa0898040 | Msa1166560 | 0.809551 | 1.789727e-50 | -8.615850e-47 |
| Msa0898040 | Msa1169550 | 0.817443 | 3.289482e-52 | -8.615850e-47 |
| Msa0898040 | Msa1179990 | 0.809941 | 1.475148e-50 | -8.615850e-47 |
| Msa0898040 | Msa1199570 | 0.814224 | 1.717925e-51 | -8.615850e-47 |
| Msa0898040 | Msa1202580 | 0.803648 | 3.153601e-49 | -8.615850e-47 |
| Msa0898040 | Msa1204530 | 0.809231 | 2.095527e-50 | -8.615850e-47 |
| Msa0898040 | Msa1206650 | 0.828428 | 9.037859e-55 | -8.615850e-47 |
| Msa0898040 | Msa1212940 | 0.804326 | 2.279863e-49 | -8.615850e-47 |
| Msa0898040 | Msa1212950 | 0.822865 | 1.884208e-53 | -8.615850e-47 |
| Msa0898040 | Msa1216260 | 0.809853 | 1.541017e-50 | -8.615850e-47 |
| Msa0898040 | Msa1218600 | 0.809206 | 2.121742e-50 | -8.615850e-47 |
| Msa0898040 | Msa1243740 | -0.805835 | 1.101780e-49 | -8.615850e-47 |
| Msa0898040 | Msa1251160 | 0.828648 | 7.998023e-55 | -8.615850e-47 |
| Msa0898040 | Msa1254730 | 0.807332 | 5.324075e-50 | -8.615850e-47 |
| Msa0898040 | Msa1265590 | 0.800397 | 1.469021e-48 | -8.615850e-47 |
| Msa0898040 | Msa1270630 | 0.807059 | 6.082113e-50 | -8.615850e-47 |
| Msa0898040 | Msa1270700 | 0.807663 | 4.527711e-50 | -8.615850e-47 |
| Msa0898040 | Msa1294820 | 0.819714 | 1.004370e-52 | -8.615850e-47 |
| Msa0898040 | Msa1299950 | 0.812129 | 4.952431e-51 | -8.615850e-47 |
| Msa0898040 | Msa1305660 | 0.808030 | 3.783995e-50 | -8.615850e-47 |
| Msa0898040 | Msa1305710 | 0.824824 | 6.547706e-54 | -8.615850e-47 |
| Msa0898040 | Msa1308220 | 0.819726 | 9.982809e-53 | -8.615850e-47 |
| Msa0898040 | Msa1328710 | 0.819608 | 1.062394e-52 | -8.615850e-47 |
| Msa0898040 | Msa1332590 | 0.815128 | 1.083218e-51 | -8.615850e-47 |
| Msa0898040 | Msa1335250 | 0.808818 | 2.568864e-50 | -8.615850e-47 |
| Msa0898040 | Msa1342410 | 0.810672 | 1.025774e-50 | -8.615850e-47 |
| Msa0898040 | Msa1346730 | 0.840721 | 7.332815e-58 | -8.615850e-47 |
| Msa0898040 | Msa1351540 | 0.807226 | 5.606142e-50 | -8.615850e-47 |
| Msa0898040 | Msa1356610 | 0.845663 | 3.529761e-59 | -8.615850e-47 |
| Msa0898040 | Msa1357190 | 0.804955 | 1.684627e-49 | -8.615850e-47 |
| Msa0898040 | Msa1360440 | 0.806947 | 6.423347e-50 | -8.615850e-47 |
| Msa0898040 | Msa1361400 | 0.802683 | 4.993919e-49 | -8.615850e-47 |
| Msa0898040 | Msa1362420 | 0.806488 | 8.027961e-50 | -8.615850e-47 |
| Msa0898040 | Msa1367590 | 0.866531 | 2.663373e-65 | -8.615850e-47 |
| Msa0898040 | Msa1369690 | 0.809335 | 1.990730e-50 | -8.615850e-47 |
| Msa0898040 | Msa1370070 | -0.818713 | 1.697582e-52 | -8.615850e-47 |
| Msa0898040 | Msa1374060 | 0.816952 | 4.242049e-52 | -8.615850e-47 |
| Msa0898040 | Msa1376650 | 0.828910 | 6.912054e-55 | -8.615850e-47 |
| Msa0898040 | Msa1381350 | 0.831973 | 1.232213e-55 | -8.615850e-47 |
| Msa0898040 | Msa1382560 | 0.807118 | 5.909836e-50 | -8.615850e-47 |
| Msa0898040 | Msa1390670 | 0.824365 | 8.395493e-54 | -8.615850e-47 |
| Msa0898040 | Msa1397120 | 0.806104 | 9.674643e-50 | -8.615850e-47 |
| Msa0898040 | Msa1402400 | 0.810658 | 1.033328e-50 | -8.615850e-47 |
| Msa0898040 | Msa1403890 | 0.800255 | 1.570621e-48 | -8.615850e-47 |
| Msa0898040 | Msa1407580 | 0.802831 | 4.655722e-49 | -8.615850e-47 |
| Msa0898040 | Msa1411950 | 0.813856 | 2.071458e-51 | -8.615850e-47 |
| Msa0898040 | Msa1418340 | 0.836043 | 1.178872e-56 | -8.615850e-47 |
| Msa0898040 | Msa1419870 | 0.806645 | 7.439868e-50 | -8.615850e-47 |
| Msa0898040 | Msa1421560 | 0.814044 | 1.882607e-51 | -8.615850e-47 |
| Msa0898040 | Msa1433390 | 0.847418 | 1.171283e-59 | -8.615850e-47 |
| Msa0898040 | Msa1445570 | 0.817735 | 2.825912e-52 | -8.615850e-47 |
| Msa0898040 | Msa1446810 | 0.813806 | 2.124019e-51 | -8.615850e-47 |
| Msa0898040 | Msa1450720 | 0.829340 | 5.438470e-55 | -8.615850e-47 |
| Msa0898040 | Msa1451160 | 0.828434 | 9.011020e-55 | -8.615850e-47 |
| Msa0898040 | Msa1458610 | 0.804580 | 2.018018e-49 | -8.615850e-47 |
| Msa0898040 | Msa1462290 | 0.812975 | 3.235217e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0898040 | MtrunA17_Chr6g0483631 | 92.033 | 364 | 16 | 3 | 1 | 355 | 1 | 360 | 0.0 | 625 |
| Msa0898040 | MtrunA17_Chr8g0392341 | 58.939 | 358 | 119 | 11 | 7 | 354 | 14 | 353 | 1.99e-133 | 384 |
| Msa0898040 | MtrunA17_Chr1g0153211 | 50.000 | 102 | 50 | 1 | 247 | 348 | 602 | 702 | 7.80e-29 | 117 |
| Msa0898040 | MtrunA17_Chr3g0138951 | 49.107 | 112 | 51 | 2 | 247 | 352 | 422 | 533 | 8.77e-29 | 117 |
| Msa0898040 | MtrunA17_Chr7g0263911 | 44.275 | 131 | 68 | 3 | 224 | 352 | 509 | 636 | 3.49e-27 | 112 |
| Msa0898040 | MtrunA17_Chr2g0316591 | 49.057 | 106 | 50 | 3 | 247 | 352 | 197 | 298 | 4.80e-27 | 108 |
| Msa0898040 | MtrunA17_Chr2g0316601 | 43.220 | 118 | 60 | 2 | 243 | 353 | 400 | 517 | 7.71e-27 | 111 |
| Msa0898040 | MtrunA17_Chr1g0147951 | 46.789 | 109 | 52 | 2 | 247 | 349 | 362 | 470 | 1.01e-26 | 110 |
| Msa0898040 | MtrunA17_Chr4g0044601 | 48.598 | 107 | 54 | 1 | 247 | 353 | 593 | 698 | 1.59e-25 | 107 |
| Msa0898040 | MtrunA17_Chr1g0181401 | 45.872 | 109 | 54 | 3 | 246 | 353 | 426 | 530 | 1.66e-24 | 104 |
| Msa0898040 | MtrunA17_Chr2g0315711 | 41.228 | 114 | 58 | 3 | 247 | 352 | 217 | 329 | 4.76e-22 | 95.5 |
| Msa0898040 | MtrunA17_Chr3g0124751 | 44.211 | 95 | 50 | 2 | 257 | 351 | 139 | 230 | 1.20e-18 | 84.0 |
| Msa0898040 | MtrunA17_Chr3g0086891 | 39.583 | 96 | 57 | 1 | 254 | 349 | 348 | 442 | 4.01e-18 | 85.1 |
| Msa0898040 | MtrunA17_Chr8g0352131 | 37.755 | 98 | 60 | 1 | 254 | 351 | 144 | 240 | 6.76e-17 | 79.3 |
| Msa0898040 | MtrunA17_Chr5g0401961 | 40.404 | 99 | 57 | 2 | 255 | 352 | 499 | 596 | 1.09e-16 | 81.3 |
| Msa0898040 | MtrunA17_Chr1g0211831 | 39.130 | 115 | 55 | 3 | 242 | 351 | 228 | 332 | 7.46e-16 | 77.8 |
| Msa0898040 | MtrunA17_Chr4g0032561 | 34.711 | 121 | 76 | 2 | 235 | 353 | 123 | 242 | 2.39e-15 | 74.7 |
| Msa0898040 | MtrunA17_Chr2g0315681 | 40.909 | 88 | 45 | 3 | 247 | 327 | 89 | 176 | 1.09e-13 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0898040 | AT1G73760.1 | 41.799 | 378 | 155 | 14 | 4 | 348 | 15 | 360 | 8.77e-75 | 236 |
| Msa0898040 | AT1G17970.1 | 37.696 | 382 | 189 | 12 | 4 | 355 | 6 | 368 | 4.46e-59 | 195 |
| Msa0898040 | AT1G73760.2 | 37.671 | 292 | 120 | 13 | 4 | 262 | 15 | 277 | 2.16e-37 | 136 |
| Msa0898040 | AT4G31450.1 | 42.690 | 171 | 68 | 5 | 208 | 348 | 319 | 489 | 6.65e-34 | 131 |
| Msa0898040 | AT4G31450.2 | 42.690 | 171 | 68 | 5 | 208 | 348 | 319 | 489 | 6.65e-34 | 131 |
| Msa0898040 | AT2G15530.5 | 51.786 | 112 | 52 | 1 | 246 | 355 | 593 | 704 | 1.27e-30 | 123 |
| Msa0898040 | AT2G15530.3 | 51.786 | 112 | 52 | 1 | 246 | 355 | 593 | 704 | 1.27e-30 | 123 |
| Msa0898040 | AT2G15530.2 | 51.786 | 112 | 52 | 1 | 246 | 355 | 593 | 704 | 1.27e-30 | 123 |
| Msa0898040 | AT2G15530.1 | 51.786 | 112 | 52 | 1 | 246 | 355 | 593 | 704 | 1.27e-30 | 123 |
| Msa0898040 | AT2G15530.7 | 51.786 | 112 | 52 | 1 | 246 | 355 | 593 | 704 | 1.27e-30 | 123 |
| Msa0898040 | AT2G15530.6 | 51.786 | 112 | 52 | 1 | 246 | 355 | 571 | 682 | 1.36e-30 | 123 |
| Msa0898040 | AT4G34040.1 | 53.922 | 102 | 46 | 1 | 247 | 348 | 560 | 660 | 2.99e-30 | 122 |
| Msa0898040 | AT5G10650.1 | 46.226 | 106 | 53 | 1 | 247 | 348 | 411 | 516 | 1.14e-29 | 119 |
| Msa0898040 | AT5G10650.2 | 46.226 | 106 | 53 | 1 | 247 | 348 | 411 | 516 | 1.14e-29 | 119 |
| Msa0898040 | AT5G24870.3 | 47.368 | 114 | 54 | 2 | 247 | 355 | 404 | 516 | 2.11e-28 | 115 |
| Msa0898040 | AT5G24870.1 | 47.368 | 114 | 54 | 2 | 247 | 355 | 404 | 516 | 2.11e-28 | 115 |
| Msa0898040 | AT5G24870.2 | 47.368 | 114 | 54 | 2 | 247 | 355 | 404 | 516 | 2.11e-28 | 115 |
| Msa0898040 | AT5G42940.2 | 43.802 | 121 | 65 | 2 | 229 | 348 | 560 | 678 | 7.46e-28 | 115 |
| Msa0898040 | AT5G42940.1 | 43.802 | 121 | 65 | 2 | 229 | 348 | 560 | 678 | 7.46e-28 | 115 |
| Msa0898040 | AT2G15530.4 | 51.923 | 104 | 48 | 1 | 247 | 348 | 594 | 697 | 3.40e-27 | 113 |
| Msa0898040 | AT1G53190.2 | 38.346 | 133 | 72 | 2 | 231 | 353 | 356 | 488 | 8.77e-27 | 111 |
| Msa0898040 | AT1G53190.1 | 38.346 | 133 | 72 | 2 | 231 | 353 | 356 | 488 | 8.77e-27 | 111 |
| Msa0898040 | AT1G45180.2 | 47.107 | 121 | 61 | 2 | 229 | 348 | 467 | 585 | 3.97e-26 | 109 |
| Msa0898040 | AT3G15070.1 | 42.727 | 110 | 60 | 1 | 247 | 353 | 365 | 474 | 4.83e-26 | 108 |
| Msa0898040 | AT3G15070.2 | 42.727 | 110 | 60 | 1 | 247 | 353 | 365 | 474 | 4.83e-26 | 108 |
| Msa0898040 | AT1G45180.1 | 47.107 | 121 | 61 | 2 | 229 | 348 | 515 | 633 | 5.60e-26 | 109 |
| Msa0898040 | AT1G45180.3 | 47.107 | 121 | 61 | 2 | 229 | 348 | 515 | 633 | 5.60e-26 | 109 |
| Msa0898040 | AT1G45180.4 | 47.107 | 121 | 61 | 2 | 229 | 348 | 515 | 633 | 5.60e-26 | 109 |
| Msa0898040 | AT2G37150.10 | 44.167 | 120 | 59 | 3 | 234 | 352 | 426 | 538 | 2.99e-20 | 92.4 |
| Msa0898040 | AT2G37150.11 | 44.167 | 120 | 59 | 3 | 234 | 352 | 426 | 538 | 2.99e-20 | 92.4 |
| Msa0898040 | AT2G37150.9 | 44.167 | 120 | 59 | 3 | 234 | 352 | 426 | 538 | 2.99e-20 | 92.4 |
| Msa0898040 | AT2G37150.12 | 44.167 | 120 | 59 | 3 | 234 | 352 | 426 | 538 | 2.99e-20 | 92.4 |
| Msa0898040 | AT2G37150.5 | 44.167 | 120 | 59 | 3 | 234 | 352 | 426 | 538 | 2.99e-20 | 92.4 |
| Msa0898040 | AT2G37150.4 | 44.167 | 120 | 59 | 3 | 234 | 352 | 426 | 538 | 2.99e-20 | 92.4 |
| Msa0898040 | AT2G37150.2 | 44.167 | 120 | 59 | 3 | 234 | 352 | 426 | 538 | 2.99e-20 | 92.4 |
| Msa0898040 | AT2G37150.8 | 44.167 | 120 | 59 | 3 | 234 | 352 | 426 | 538 | 2.99e-20 | 92.4 |
| Msa0898040 | AT2G37150.7 | 44.167 | 120 | 59 | 3 | 234 | 352 | 426 | 538 | 2.99e-20 | 92.4 |
| Msa0898040 | AT2G37150.6 | 44.167 | 120 | 59 | 3 | 234 | 352 | 426 | 538 | 2.99e-20 | 92.4 |
| Msa0898040 | AT2G37150.1 | 44.167 | 120 | 59 | 3 | 234 | 352 | 426 | 538 | 2.99e-20 | 92.4 |
| Msa0898040 | AT2G37150.14 | 44.167 | 120 | 59 | 3 | 234 | 352 | 442 | 554 | 3.30e-20 | 92.4 |
| Msa0898040 | AT2G37150.13 | 44.167 | 120 | 59 | 3 | 234 | 352 | 442 | 554 | 3.30e-20 | 92.4 |
| Msa0898040 | AT2G37150.15 | 44.167 | 120 | 59 | 3 | 234 | 352 | 442 | 554 | 3.30e-20 | 92.4 |
| Msa0898040 | AT2G37150.3 | 44.167 | 120 | 59 | 3 | 234 | 352 | 479 | 591 | 5.52e-20 | 91.7 |
| Msa0898040 | AT3G63530.2 | 36.275 | 102 | 64 | 1 | 254 | 355 | 145 | 245 | 1.69e-16 | 78.6 |
| Msa0898040 | AT3G63530.1 | 36.275 | 102 | 64 | 1 | 254 | 355 | 145 | 245 | 1.69e-16 | 78.6 |
| Msa0898040 | AT5G67120.1 | 37.500 | 96 | 56 | 1 | 257 | 352 | 181 | 272 | 1.47e-15 | 76.3 |
| Msa0898040 | AT3G19910.1 | 36.364 | 99 | 60 | 1 | 253 | 351 | 237 | 332 | 2.71e-15 | 76.3 |
| Msa0898040 | AT1G36950.1 | 34.286 | 105 | 61 | 2 | 247 | 349 | 24 | 122 | 4.91e-14 | 71.2 |
| Msa0898040 | AT4G00070.1 | 35.052 | 97 | 55 | 2 | 247 | 341 | 88 | 178 | 1.42e-13 | 68.9 |
| Msa0898040 | AT3G47180.1 | 37.755 | 98 | 57 | 3 | 257 | 353 | 115 | 209 | 4.28e-13 | 68.2 |
| Msa0898040 | AT1G17970.2 | 32.099 | 243 | 123 | 9 | 4 | 219 | 6 | 233 | 4.49e-12 | 66.2 |
| Msa0898040 | AT5G52140.1 | 33.333 | 111 | 53 | 2 | 255 | 351 | 175 | 278 | 1.22e-11 | 65.1 |
| Msa0898040 | AT5G10650.3 | 35.556 | 90 | 51 | 2 | 247 | 329 | 411 | 500 | 3.94e-11 | 64.7 |
Find 82 sgRNAs with CRISPR-Local
Find 248 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGAAGTGGATTGGATTAA+AGG | 0.127262 | 6_1:-90685033 | None:intergenic |
| TTTGGTAATGGTCTCTAAAT+TGG | 0.154595 | 6_1:+90689095 | Msa0898040:three_prime_UTR |
| AATTGGAAACATGTTATATT+TGG | 0.157095 | 6_1:+90689077 | Msa0898040:three_prime_UTR |
| GGGGTGCCTTGATTTGTTTC+TGG | 0.157620 | 6_1:-90684977 | None:intergenic |
| TGAAACATGATATGAAATTT+TGG | 0.174796 | 6_1:-90684833 | None:intergenic |
| ATGACAAACTTTCTTGATTT+AGG | 0.185666 | 6_1:-90686973 | None:intergenic |
| TTGAAGATAATGAAATTTAA+AGG | 0.218139 | 6_1:+90688043 | Msa0898040:intron |
| CGTCGTGGATTAGAGTCTTT+TGG | 0.281440 | 6_1:+90687028 | Msa0898040:CDS |
| GGGTGCCTTGATTTGTTTCT+GGG | 0.293271 | 6_1:-90684976 | None:intergenic |
| GGAAAAGAGAGTGGAGATAC+TGG | 0.302656 | 6_1:-90685061 | None:intergenic |
| TGGCAGCGTTCATCTTATTT+TGG | 0.312818 | 6_1:+90686935 | Msa0898040:intron |
| TCAAGAGGAAAACTTGATAA+TGG | 0.337233 | 6_1:+90685423 | Msa0898040:CDS |
| TGGCTTTCTAAGTGAAGAAT+TGG | 0.350099 | 6_1:+90689060 | Msa0898040:three_prime_UTR |
| TTTAAAGGAGCTAGACTAAT+GGG | 0.372266 | 6_1:+90688058 | Msa0898040:CDS |
| GTATGAATCAGATGATGAAT+TGG | 0.374695 | 6_1:+90688831 | Msa0898040:CDS |
| TTCATGTGTCCTGTGATAAC+AGG | 0.376347 | 6_1:-90684943 | None:intergenic |
| AGAATTGGTTATGTGAAAAC+TGG | 0.378566 | 6_1:+90688587 | Msa0898040:CDS |
| GTTTGGTGTGGACCTGGAAC+TGG | 0.389369 | 6_1:+90685336 | Msa0898040:CDS |
| CAGGATGTTTGGTGTGGACC+TGG | 0.408347 | 6_1:+90685330 | Msa0898040:CDS |
| AGTTTGATCAGTTTCTGAAA+TGG | 0.416654 | 6_1:-90684998 | None:intergenic |
| ACTATCATGTGTGGTTTCAT+TGG | 0.416786 | 6_1:-90685103 | None:intergenic |
| CTTGAGCTGGGAGAGAGAAT+TGG | 0.417630 | 6_1:+90688572 | Msa0898040:CDS |
| GTTTGATCAGTTTCTGAAAT+GGG | 0.427276 | 6_1:-90684997 | None:intergenic |
| GGATGTGTTGTTTGAGAAAG+TGG | 0.430164 | 6_1:-90685082 | None:intergenic |
| TTGCAAACTCACTTGACAAA+TGG | 0.433202 | 6_1:-90688702 | None:intergenic |
| AAACATGTTATATTTGGTAA+TGG | 0.434361 | 6_1:+90689083 | Msa0898040:three_prime_UTR |
| TCATGAAATTGGTGTTTGAA+TGG | 0.437198 | 6_1:+90689195 | Msa0898040:three_prime_UTR |
| TCAGATAAGAATCCAGTTCC+AGG | 0.441033 | 6_1:-90685348 | None:intergenic |
| TGGATTTGCAAGAAGTGGAT+TGG | 0.441489 | 6_1:-90685041 | None:intergenic |
| GCTTCGAATGTTTCTTCTGA+TGG | 0.448426 | 6_1:+90687073 | Msa0898040:CDS |
| ATTTAAAGGAGCTAGACTAA+TGG | 0.453341 | 6_1:+90688057 | Msa0898040:CDS |
| TATGAATCAGATGATGAATT+GGG | 0.460080 | 6_1:+90688832 | Msa0898040:CDS |
| ATTGGCAAGGGAAGAAGAAC+AGG | 0.472226 | 6_1:+90685253 | Msa0898040:CDS |
| CACCGCCGGTACATCACAAC+AGG | 0.474074 | 6_1:+90685197 | Msa0898040:CDS |
| AGAAAGAATGTTTCTTCAAG+AGG | 0.474714 | 6_1:+90685408 | Msa0898040:CDS |
| CGACTTCTTGCTTACAGACT+GGG | 0.478209 | 6_1:-90688924 | None:intergenic |
| TTATCACAGGACACATGAAA+TGG | 0.480387 | 6_1:+90684947 | Msa0898040:CDS |
| GATACTGGATTTGCAAGAAG+TGG | 0.481405 | 6_1:-90685046 | None:intergenic |
| ACGACTTCTTGCTTACAGAC+TGG | 0.490694 | 6_1:-90688925 | None:intergenic |
| CACGTGATCAATTTAGAGAC+TGG | 0.496333 | 6_1:+90688089 | Msa0898040:CDS |
| AGAAGAAACAAAACATGTCA+TGG | 0.505701 | 6_1:+90685288 | Msa0898040:CDS |
| AGAGGACTCGGTTGCACCGC+CGG | 0.517678 | 6_1:+90685183 | Msa0898040:CDS |
| CTATACATCATATTAAAATG+AGG | 0.518502 | 6_1:-90688990 | None:intergenic |
| CTTCCCTTGCCAATCTGCAG+AGG | 0.521246 | 6_1:-90685244 | None:intergenic |
| GAAGAAACAAAACATGTCAT+GGG | 0.525412 | 6_1:+90685289 | Msa0898040:CDS |
| ATTTATAAGAAGATATTGAA+AGG | 0.535284 | 6_1:-90684863 | None:intergenic |
| TGAGAAAGTGGAAAAGAGAG+TGG | 0.536359 | 6_1:-90685070 | None:intergenic |
| TGCTGCTGCTGATGTTTCTG+TGG | 0.541957 | 6_1:+90685371 | Msa0898040:CDS |
| GTAACAGCAATTGCTTGAGC+TGG | 0.542807 | 6_1:+90688559 | Msa0898040:intron |
| TGATTCGATCCTCTGCAGAT+TGG | 0.544628 | 6_1:+90685235 | Msa0898040:CDS |
| ATCACAACAGGTGTCTGTAC+CGG | 0.545837 | 6_1:+90685209 | Msa0898040:CDS |
| TATACATCATATTAAAATGA+GGG | 0.547407 | 6_1:-90688989 | None:intergenic |
| TTCTTCTGATGGTATTGCTG+AGG | 0.549937 | 6_1:+90687084 | Msa0898040:CDS |
| AGACACCTGTTGTGATGTAC+CGG | 0.549972 | 6_1:-90685202 | None:intergenic |
| GGGTTACGCCACTCGAGTCA+AGG | 0.559378 | 6_1:-90688955 | None:intergenic |
| TGTAAATTATACTCAAGAGT+GGG | 0.560300 | 6_1:+90689128 | Msa0898040:three_prime_UTR |
| CGATCCTCTGCAGATTGGCA+AGG | 0.563656 | 6_1:+90685240 | Msa0898040:CDS |
| TTTACTGCATCAACCTTCAG+AGG | 0.568041 | 6_1:+90685165 | Msa0898040:CDS |
| TTGTAAATTATACTCAAGAG+TGG | 0.569349 | 6_1:+90689127 | Msa0898040:three_prime_UTR |
| GAAAACTTGATAATGGTGAA+AGG | 0.574739 | 6_1:+90685430 | Msa0898040:CDS |
| ATGTCATGGGGTTGATGATG+TGG | 0.576431 | 6_1:+90685302 | Msa0898040:CDS |
| GGTGCAACCGAGTCCTCTGA+AGG | 0.578158 | 6_1:-90685178 | None:intergenic |
| TAAACCATGCCTGTTATCAC+AGG | 0.578283 | 6_1:+90684934 | Msa0898040:exon |
| GAAGTCCCAGAAACAAATCA+AGG | 0.581530 | 6_1:+90684971 | Msa0898040:CDS |
| GATCCTCTGCAGATTGGCAA+GGG | 0.591294 | 6_1:+90685241 | Msa0898040:CDS |
| TTTGATCAGTTTCTGAAATG+GGG | 0.598291 | 6_1:-90684996 | None:intergenic |
| TAAAGGAGCTAGACTAATGG+GGG | 0.604237 | 6_1:+90688060 | Msa0898040:CDS |
| ACTTTCAGTGTATAAAACAA+TGG | 0.605990 | 6_1:+90688881 | Msa0898040:CDS |
| GCATCAACCTTCAGAGGACT+CGG | 0.610375 | 6_1:+90685171 | Msa0898040:CDS |
| ATTCAAACACCAATTTCATG+AGG | 0.618025 | 6_1:-90689193 | None:intergenic |
| TTAAAGGAGCTAGACTAATG+GGG | 0.619391 | 6_1:+90688059 | Msa0898040:CDS |
| TAACAGCAATTGCTTGAGCT+GGG | 0.635760 | 6_1:+90688560 | Msa0898040:intron |
| GCAGAGGATCGAATCACTGC+CGG | 0.636222 | 6_1:-90685228 | None:intergenic |
| TGAAAGGATAACACATAGAG+AGG | 0.638029 | 6_1:+90685446 | Msa0898040:CDS |
| TGGTTCGACCTTGACTCGAG+TGG | 0.639867 | 6_1:+90688947 | Msa0898040:exon |
| ATACATCATATTAAAATGAG+GGG | 0.646167 | 6_1:-90688988 | None:intergenic |
| GTGTCCTGTGATAACAGGCA+TGG | 0.666826 | 6_1:-90684938 | None:intergenic |
| AGTCTGTAAGCAAGAAGTCG+TGG | 0.680527 | 6_1:+90688927 | Msa0898040:CDS |
| AAGAAACAAAACATGTCATG+GGG | 0.685832 | 6_1:+90685290 | Msa0898040:CDS |
| CACCTGTTGTGATGTACCGG+CGG | 0.715490 | 6_1:-90685199 | None:intergenic |
| AAAGGAGCTAGACTAATGGG+GGG | 0.733126 | 6_1:+90688061 | Msa0898040:CDS |
| TGTTGATAATATGTCATACG+AGG | 0.781009 | 6_1:+90688120 | Msa0898040:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATAAAATTTTATATGTGT+TGG | + | chr6_1:90686915-90686934 | Msa0898040:intron | 10.0% |
| !!! | ATTTTTTTTCTTTCTATTTT+TGG | + | chr6_1:90687851-90687870 | Msa0898040:intron | 10.0% |
| !! | TTAAATATGAAACTTTAATT+TGG | - | chr6_1:90688731-90688750 | None:intergenic | 10.0% |
| !! | ATTTATAAGAAGATATTGAA+AGG | - | chr6_1:90684866-90684885 | None:intergenic | 15.0% |
| !! | ATCAATTAATCAAATAATCA+TGG | - | chr6_1:90685568-90685587 | None:intergenic | 15.0% |
| !!! | ATTGATTTTTATGCATTATA+TGG | + | chr6_1:90685582-90685601 | Msa0898040:intron | 15.0% |
| !! | AAACTAATAATCAAAATCAA+AGG | - | chr6_1:90685675-90685694 | None:intergenic | 15.0% |
| !!! | ATTTTGATTATTAGTTTTGT+AGG | + | chr6_1:90685678-90685697 | Msa0898040:intron | 15.0% |
| !!! | TTTTCTTTATTGATTTATTG+TGG | + | chr6_1:90686693-90686712 | Msa0898040:intron | 15.0% |
| !!! | TTTGCATACTTATTTTATTT+TGG | + | chr6_1:90687798-90687817 | Msa0898040:intron | 15.0% |
| !! | TTGAAGATAATGAAATTTAA+AGG | + | chr6_1:90688043-90688062 | Msa0898040:intron | 15.0% |
| !! | TATACATCATATTAAAATGA+GGG | - | chr6_1:90688992-90689011 | None:intergenic | 15.0% |
| !!! | TTCTATTCTTTTAAAACTTT+TGG | + | chr6_1:90689040-90689059 | Msa0898040:three_prime_UTR | 15.0% |
| !!! | ATACGGTTAACATTATTTTT+TGG | + | chr6_1:90685622-90685641 | Msa0898040:intron | 20.0% |
| !!! | GTCTTTTATTAATTCCATTT+TGG | + | chr6_1:90685728-90685747 | Msa0898040:intron | 20.0% |
| !! | AAAAATGTCATTATTGCAAA+GGG | - | chr6_1:90686041-90686060 | None:intergenic | 20.0% |
| !! | TAAAAATGTCATTATTGCAA+AGG | - | chr6_1:90686042-90686061 | None:intergenic | 20.0% |
| !!! | AGTTAATTTGTTTTGATAAG+CGG | - | chr6_1:90686143-90686162 | None:intergenic | 20.0% |
| !! | ATGTAAAATGTAACGAAATT+CGG | - | chr6_1:90686527-90686546 | None:intergenic | 20.0% |
| !! | GTTATTATTCATACAATCAT+AGG | + | chr6_1:90687459-90687478 | Msa0898040:intron | 20.0% |
| !!! | TTATTTGTTGTTTGGAATAT+GGG | + | chr6_1:90687482-90687501 | Msa0898040:intron | 20.0% |
| !!! | AATTTTATCTTTAGTGCTTT+AGG | + | chr6_1:90687550-90687569 | Msa0898040:intron | 20.0% |
| !!! | CATAAACTTTTTCTGATTTT+AGG | - | chr6_1:90687647-90687666 | None:intergenic | 20.0% |
| !!! | TTATTTTAATTTGAGTGCTA+TGG | + | chr6_1:90687669-90687688 | Msa0898040:intron | 20.0% |
| !! | ACTAAAGACATTCTAATATT+TGG | - | chr6_1:90687774-90687793 | None:intergenic | 20.0% |
| !!! | TTCTTTCTATTTTTGGATTA+TGG | + | chr6_1:90687858-90687877 | Msa0898040:intron | 20.0% |
| !!! | AGTTCTGGTTTATTATAAAA+TGG | + | chr6_1:90687913-90687932 | Msa0898040:intron | 20.0% |
| !!! | AAAAAAATAGAGAGCATTAA+TGG | - | chr6_1:90688158-90688177 | None:intergenic | 20.0% |
| !! | TAATATTGCCATAATTATCA+AGG | + | chr6_1:90688181-90688200 | Msa0898040:intron | 20.0% |
| !! | ATACATCATATTAAAATGAG+GGG | - | chr6_1:90688991-90689010 | None:intergenic | 20.0% |
| !! | CTATACATCATATTAAAATG+AGG | - | chr6_1:90688993-90689012 | None:intergenic | 20.0% |
| !! | AATTGGAAACATGTTATATT+TGG | + | chr6_1:90689077-90689096 | Msa0898040:three_prime_UTR | 20.0% |
| !! | AAACATGTTATATTTGGTAA+TGG | + | chr6_1:90689083-90689102 | Msa0898040:three_prime_UTR | 20.0% |
| !! | TGAAATTTGAATACAAAAAG+AGG | + | chr6_1:90689257-90689276 | Msa0898040:three_prime_UTR | 20.0% |
| !!! | TGTTCTTTTTTGTTCTGTTT+TGG | - | chr6_1:90685131-90685150 | None:intergenic | 25.0% |
| ! | CACAAGATAACAAATAATCA+TGG | - | chr6_1:90685529-90685548 | None:intergenic | 25.0% |
| ! | TAAAAGACCATAATCTATCA+AGG | - | chr6_1:90685716-90685735 | None:intergenic | 25.0% |
| ! | TTTGTTCAATTTAAGCTAGT+AGG | + | chr6_1:90685998-90686017 | Msa0898040:intron | 25.0% |
| !! | TAGCTTTTGAATATAGCTTA+TGG | - | chr6_1:90686112-90686131 | None:intergenic | 25.0% |
| ! | TAAGCTATATTCAAAAGCTA+AGG | + | chr6_1:90686112-90686131 | Msa0898040:intron | 25.0% |
| ! | AAGCTATATTCAAAAGCTAA+GGG | + | chr6_1:90686113-90686132 | Msa0898040:intron | 25.0% |
| ! | TCCTTGATTCATTATAATAG+AGG | + | chr6_1:90686230-90686249 | Msa0898040:intron | 25.0% |
| ! | CCTTGATTCATTATAATAGA+GGG | + | chr6_1:90686231-90686250 | Msa0898040:intron | 25.0% |
| ! | TTTCCGATATAAAAATGTCA+GGG | + | chr6_1:90686263-90686282 | Msa0898040:intron | 25.0% |
| ! | TAAATTTACATCGTACAAGT+CGG | + | chr6_1:90686380-90686399 | Msa0898040:intron | 25.0% |
| ! | CAATATTGTAATCTTCACTA+TGG | + | chr6_1:90686406-90686425 | Msa0898040:intron | 25.0% |
| ! | CACTATGGTATATAAATACA+AGG | + | chr6_1:90686421-90686440 | Msa0898040:intron | 25.0% |
| ! | TTGTTATGAGTGATAGATTA+GGG | - | chr6_1:90686460-90686479 | None:intergenic | 25.0% |
| !! | TTTGTTATGAGTGATAGATT+AGG | - | chr6_1:90686461-90686480 | None:intergenic | 25.0% |
| ! | ATCTATCACTCATAACAAAA+TGG | + | chr6_1:90686462-90686481 | Msa0898040:intron | 25.0% |
| !!! | TACGTATGACTTTTAGAAAT+TGG | - | chr6_1:90686667-90686686 | None:intergenic | 25.0% |
| !!! | ATCACTAGACTTATTTTCAA+GGG | - | chr6_1:90686721-90686740 | None:intergenic | 25.0% |
| ! | ATGACATACATGTTAATGAT+TGG | + | chr6_1:90686818-90686837 | Msa0898040:intron | 25.0% |
| ! | ATGACAAACTTTCTTGATTT+AGG | - | chr6_1:90686976-90686995 | None:intergenic | 25.0% |
| !!! | TCAAGAAAGTTTGTCATTTT+TGG | + | chr6_1:90686979-90686998 | Msa0898040:CDS | 25.0% |
| ! | AAATGAAAGAACATGAAAAG+GGG | - | chr6_1:90687130-90687149 | None:intergenic | 25.0% |
| ! | GAAATGAAAGAACATGAAAA+GGG | - | chr6_1:90687131-90687150 | None:intergenic | 25.0% |
| !! | CTTTTCATGTTCTTTCATTT+CGG | + | chr6_1:90687130-90687149 | Msa0898040:intron | 25.0% |
| ! | TTGTATTGTTGACAAAAGAA+AGG | + | chr6_1:90687408-90687427 | Msa0898040:intron | 25.0% |
| ! | TGTATTGTTGACAAAAGAAA+GGG | + | chr6_1:90687409-90687428 | Msa0898040:intron | 25.0% |
| !!! | ATCATAGGTTATTTGTTGTT+TGG | + | chr6_1:90687474-90687493 | Msa0898040:intron | 25.0% |
| !!! | GTTATTTGTTGTTTGGAATA+TGG | + | chr6_1:90687481-90687500 | Msa0898040:intron | 25.0% |
| !! | AAATTCTGGAAACAATCTAT+TGG | + | chr6_1:90688259-90688278 | Msa0898040:intron | 25.0% |
| ! | AACAATCTATTGGATTTCTA+AGG | + | chr6_1:90688269-90688288 | Msa0898040:intron | 25.0% |
| ! | ATGAGATGAAAAACAACATA+AGG | + | chr6_1:90688621-90688640 | Msa0898040:CDS | 25.0% |
| ! | AATGATATAAAGTGATGAGA+TGG | - | chr6_1:90688759-90688778 | None:intergenic | 25.0% |
| ! | TATGAATCAGATGATGAATT+GGG | + | chr6_1:90688832-90688851 | Msa0898040:CDS | 25.0% |
| ! | ACTTTCAGTGTATAAAACAA+TGG | + | chr6_1:90688881-90688900 | Msa0898040:CDS | 25.0% |
| ! | TTGTAAATTATACTCAAGAG+TGG | + | chr6_1:90689127-90689146 | Msa0898040:three_prime_UTR | 25.0% |
| ! | TGTAAATTATACTCAAGAGT+GGG | + | chr6_1:90689128-90689147 | Msa0898040:three_prime_UTR | 25.0% |
| !! | TTTTACTTTCCTCATGAAAT+TGG | + | chr6_1:90689184-90689203 | Msa0898040:three_prime_UTR | 25.0% |
| ! | TTGAATACAAAAAGAGGTAA+TGG | + | chr6_1:90689263-90689282 | Msa0898040:three_prime_UTR | 25.0% |
| !! | TTTGATCAGTTTCTGAAATG+GGG | - | chr6_1:90684999-90685018 | None:intergenic | 30.0% |
| !! | GTTTGATCAGTTTCTGAAAT+GGG | - | chr6_1:90685000-90685019 | None:intergenic | 30.0% |
| ! | AGTTTGATCAGTTTCTGAAA+TGG | - | chr6_1:90685001-90685020 | None:intergenic | 30.0% |
| AGAAGAAACAAAACATGTCA+TGG | + | chr6_1:90685288-90685307 | Msa0898040:CDS | 30.0% | |
| GAAGAAACAAAACATGTCAT+GGG | + | chr6_1:90685289-90685308 | Msa0898040:CDS | 30.0% | |
| AAGAAACAAAACATGTCATG+GGG | + | chr6_1:90685290-90685309 | Msa0898040:CDS | 30.0% | |
| AGAAAGAATGTTTCTTCAAG+AGG | + | chr6_1:90685408-90685427 | Msa0898040:CDS | 30.0% | |
| TCAAGAGGAAAACTTGATAA+TGG | + | chr6_1:90685423-90685442 | Msa0898040:CDS | 30.0% | |
| !! | GAAAACTTGATAATGGTGAA+AGG | + | chr6_1:90685430-90685449 | Msa0898040:CDS | 30.0% |
| CTTATGCTGGAATTGTAATA+CGG | + | chr6_1:90685605-90685624 | Msa0898040:intron | 30.0% | |
| TTCTCTTTAACAAGCCAAAA+TGG | - | chr6_1:90685745-90685764 | None:intergenic | 30.0% | |
| AAAAAATGCATTCACACACA+CGG | + | chr6_1:90685767-90685786 | Msa0898040:intron | 30.0% | |
| TCATGTCTTAGTGTCATATT+CGG | - | chr6_1:90685796-90685815 | None:intergenic | 30.0% | |
| AAAGTCTAATGTTGATGTGA+TGG | + | chr6_1:90685930-90685949 | Msa0898040:intron | 30.0% | |
| !!! | TAGTAGGACCGATTTTTTTT+TGG | + | chr6_1:90686014-90686033 | Msa0898040:intron | 30.0% |
| !!! | AGTAGGACCGATTTTTTTTT+GGG | + | chr6_1:90686015-90686034 | Msa0898040:intron | 30.0% |
| ! | TGAGATGACATTTTCATACT+AGG | + | chr6_1:90686197-90686216 | Msa0898040:intron | 30.0% |
| ! | GAGATGACATTTTCATACTA+GGG | + | chr6_1:90686198-90686217 | Msa0898040:intron | 30.0% |
| CCCTCTATTATAATGAATCA+AGG | - | chr6_1:90686234-90686253 | None:intergenic | 30.0% | |
| GTTTCCGATATAAAAATGTC+AGG | + | chr6_1:90686262-90686281 | Msa0898040:intron | 30.0% | |
| ! | CATCCCTGACATTTTTATAT+CGG | - | chr6_1:90686269-90686288 | None:intergenic | 30.0% |
| AAAATTATGAGGGACCAAAA+TGG | + | chr6_1:90686317-90686336 | Msa0898040:intron | 30.0% | |
| AAATTTACATCGTACAAGTC+GGG | + | chr6_1:90686381-90686400 | Msa0898040:intron | 30.0% | |
| !! | TCACTAGACTTATTTTCAAG+GGG | - | chr6_1:90686720-90686739 | None:intergenic | 30.0% |
| !! | GATCACTAGACTTATTTTCA+AGG | - | chr6_1:90686722-90686741 | None:intergenic | 30.0% |
| !! | TTTTTGTTTCGTGGTTGTTT+TGG | + | chr6_1:90686870-90686889 | Msa0898040:intron | 30.0% |
| !! | TTAGAGTCTTTTGGAAATAG+TGG | + | chr6_1:90687037-90687056 | Msa0898040:CDS | 30.0% |
| CGAAATGAAAGAACATGAAA+AGG | - | chr6_1:90687132-90687151 | None:intergenic | 30.0% | |
| TAATTCAGATTGTATGTGGT+CGG | - | chr6_1:90687338-90687357 | None:intergenic | 30.0% | |
| ! | TTTATCTTTAGTGCTTTAGG+AGG | + | chr6_1:90687553-90687572 | Msa0898040:intron | 30.0% |
| !!! | ACTGTTCTAGCTGATTTTTT+TGG | + | chr6_1:90687713-90687732 | Msa0898040:intron | 30.0% |
| ACTTCTAGCAGATTAGTATA+TGG | + | chr6_1:90687738-90687757 | Msa0898040:intron | 30.0% | |
| ACTAACAAGCCTTAGTTAAT+CGG | - | chr6_1:90687890-90687909 | None:intergenic | 30.0% | |
| ATTTAAAGGAGCTAGACTAA+TGG | + | chr6_1:90688057-90688076 | Msa0898040:CDS | 30.0% | |
| TTTAAAGGAGCTAGACTAAT+GGG | + | chr6_1:90688058-90688077 | Msa0898040:CDS | 30.0% | |
| !! | TGTTGATAATATGTCATACG+AGG | + | chr6_1:90688120-90688139 | Msa0898040:CDS | 30.0% |
| AGAATACAAGGTAACAACTT+TGG | - | chr6_1:90688224-90688243 | None:intergenic | 30.0% | |
| AAGATCACGAGTTTAAATTC+TGG | + | chr6_1:90688245-90688264 | Msa0898040:intron | 30.0% | |
| GGTAAGACAATATATGTCTT+TGG | + | chr6_1:90688290-90688309 | Msa0898040:intron | 30.0% | |
| CAATAAGGAATCTTAGCTAT+TGG | + | chr6_1:90688343-90688362 | Msa0898040:intron | 30.0% | |
| CATATGGATCAAAATGCAAA+CGG | - | chr6_1:90688516-90688535 | None:intergenic | 30.0% | |
| CACAAATTTCGATGAACATA+TGG | - | chr6_1:90688532-90688551 | None:intergenic | 30.0% | |
| CATATGTTCATCGAAATTTG+TGG | + | chr6_1:90688530-90688549 | Msa0898040:intron | 30.0% | |
| AGAATTGGTTATGTGAAAAC+TGG | + | chr6_1:90688587-90688606 | Msa0898040:CDS | 30.0% | |
| GTATGAATCAGATGATGAAT+TGG | + | chr6_1:90688831-90688850 | Msa0898040:CDS | 30.0% | |
| AAATGAGGGGAAAAACATTA+GGG | - | chr6_1:90688978-90688997 | None:intergenic | 30.0% | |
| AAAATGAGGGGAAAAACATT+AGG | - | chr6_1:90688979-90688998 | None:intergenic | 30.0% | |
| !! | TTTGGTAATGGTCTCTAAAT+TGG | + | chr6_1:90689095-90689114 | Msa0898040:three_prime_UTR | 30.0% |
| ATTCAAACACCAATTTCATG+AGG | - | chr6_1:90689196-90689215 | None:intergenic | 30.0% | |
| ! | TCATGAAATTGGTGTTTGAA+TGG | + | chr6_1:90689195-90689214 | Msa0898040:three_prime_UTR | 30.0% |
| TTATCACAGGACACATGAAA+TGG | + | chr6_1:90684947-90684966 | Msa0898040:CDS | 35.0% | |
| !! | CAAGAAGTGGATTGGATTAA+AGG | - | chr6_1:90685036-90685055 | None:intergenic | 35.0% |
| ACTATCATGTGTGGTTTCAT+TGG | - | chr6_1:90685106-90685125 | None:intergenic | 35.0% | |
| !!! | GTTTTGGTTACTATCATGTG+TGG | - | chr6_1:90685115-90685134 | None:intergenic | 35.0% |
| !! | ATGTGGATTTTCAGGATGTT+TGG | + | chr6_1:90685319-90685338 | Msa0898040:CDS | 35.0% |
| TGAAAGGATAACACATAGAG+AGG | + | chr6_1:90685446-90685465 | Msa0898040:CDS | 35.0% | |
| ATGCATTATATGGCTTATGC+TGG | + | chr6_1:90685592-90685611 | Msa0898040:intron | 35.0% | |
| TCCTTGTCCTTGATAGATTA+TGG | + | chr6_1:90685706-90685725 | Msa0898040:intron | 35.0% | |
| ACCATAATCTATCAAGGACA+AGG | - | chr6_1:90685710-90685729 | None:intergenic | 35.0% | |
| TGACACTAAGACATGAACAT+TGG | + | chr6_1:90685800-90685819 | Msa0898040:intron | 35.0% | |
| CAAAGGGCCCAAAAAAAAAT+CGG | - | chr6_1:90686025-90686044 | None:intergenic | 35.0% | |
| TGAGCCCTCAAAAAATTATG+AGG | + | chr6_1:90686306-90686325 | Msa0898040:intron | 35.0% | |
| GAGCCCTCAAAAAATTATGA+GGG | + | chr6_1:90686307-90686326 | Msa0898040:intron | 35.0% | |
| !!! | GGTCCCTCATAATTTTTTGA+GGG | - | chr6_1:90686313-90686332 | None:intergenic | 35.0% |
| !!! | TGGTCCCTCATAATTTTTTG+AGG | - | chr6_1:90686314-90686333 | None:intergenic | 35.0% |
| ! | TTGTGAGTGAAGAACCATTT+TGG | - | chr6_1:90686334-90686353 | None:intergenic | 35.0% |
| AATTTACATCGTACAAGTCG+GGG | + | chr6_1:90686382-90686401 | Msa0898040:intron | 35.0% | |
| AATTGTGTCTACTTCTCTGA+CGG | - | chr6_1:90686502-90686521 | None:intergenic | 35.0% | |
| !! | GTGTTTGTGTTTTTGTTTCG+TGG | + | chr6_1:90686861-90686880 | Msa0898040:intron | 35.0% |
| !!! | AGCGTTCATCTTATTTTGGA+AGG | + | chr6_1:90686939-90686958 | Msa0898040:intron | 35.0% |
| CCACTAATTCAGATTGTATG+TGG | - | chr6_1:90687342-90687361 | None:intergenic | 35.0% | |
| CCACATACAATCTGAATTAG+TGG | + | chr6_1:90687339-90687358 | Msa0898040:intron | 35.0% | |
| TGGATGTAACCGATTAACTA+AGG | + | chr6_1:90687878-90687897 | Msa0898040:intron | 35.0% | |
| !! | GATTAACTAAGGCTTGTTAG+TGG | + | chr6_1:90687889-90687908 | Msa0898040:intron | 35.0% |
| TTAAAGGAGCTAGACTAATG+GGG | + | chr6_1:90688059-90688078 | Msa0898040:CDS | 35.0% | |
| ACAATATATGTCTTTGGACC+TGG | + | chr6_1:90688296-90688315 | Msa0898040:intron | 35.0% | |
| AATGTAGTTTCCACGCAATA+AGG | + | chr6_1:90688328-90688347 | Msa0898040:intron | 35.0% | |
| !! | TCGACCATTGATTTAGAATG+TGG | + | chr6_1:90688419-90688438 | Msa0898040:intron | 35.0% |
| TCGACCACATTCTAAATCAA+TGG | - | chr6_1:90688426-90688445 | None:intergenic | 35.0% | |
| AAACGGTATGTCAATAGCTT+GGG | - | chr6_1:90688499-90688518 | None:intergenic | 35.0% | |
| TTGCAAACTCACTTGACAAA+TGG | - | chr6_1:90688705-90688724 | None:intergenic | 35.0% | |
| TGTATCTTTCTTGTGTGTTC+AGG | + | chr6_1:90688804-90688823 | Msa0898040:intron | 35.0% | |
| TGGCTTTCTAAGTGAAGAAT+TGG | + | chr6_1:90689060-90689079 | Msa0898040:three_prime_UTR | 35.0% | |
| TAAACCATGCCTGTTATCAC+AGG | + | chr6_1:90684934-90684953 | Msa0898040:exon | 40.0% | |
| TTCATGTGTCCTGTGATAAC+AGG | - | chr6_1:90684946-90684965 | None:intergenic | 40.0% | |
| GAAGTCCCAGAAACAAATCA+AGG | + | chr6_1:90684971-90684990 | Msa0898040:CDS | 40.0% | |
| TGGATTTGCAAGAAGTGGAT+TGG | - | chr6_1:90685044-90685063 | None:intergenic | 40.0% | |
| GATACTGGATTTGCAAGAAG+TGG | - | chr6_1:90685049-90685068 | None:intergenic | 40.0% | |
| TGAGAAAGTGGAAAAGAGAG+TGG | - | chr6_1:90685073-90685092 | None:intergenic | 40.0% | |
| !! | GGATGTGTTGTTTGAGAAAG+TGG | - | chr6_1:90685085-90685104 | None:intergenic | 40.0% |
| TTTACTGCATCAACCTTCAG+AGG | + | chr6_1:90685165-90685184 | Msa0898040:CDS | 40.0% | |
| !!! | GGTTGATGATGTGGATTTTC+AGG | + | chr6_1:90685311-90685330 | Msa0898040:CDS | 40.0% |
| !! | GATTTTCAGGATGTTTGGTG+TGG | + | chr6_1:90685324-90685343 | Msa0898040:CDS | 40.0% |
| TCAGATAAGAATCCAGTTCC+AGG | - | chr6_1:90685351-90685370 | None:intergenic | 40.0% | |
| GCAACACAACAACATACATG+TGG | - | chr6_1:90685858-90685877 | None:intergenic | 40.0% | |
| GTTGTGTTGCACACACATAT+CGG | + | chr6_1:90685868-90685887 | Msa0898040:intron | 40.0% | |
| ATTTACATCGTACAAGTCGG+GGG | + | chr6_1:90686383-90686402 | Msa0898040:intron | 40.0% | |
| GTCAGAGAAGTAGACACAAT+TGG | + | chr6_1:90686501-90686520 | Msa0898040:intron | 40.0% | |
| ! | ATTGGAAGCGTGTACGTATA+TGG | - | chr6_1:90686649-90686668 | None:intergenic | 40.0% |
| !! | TGGCAGCGTTCATCTTATTT+TGG | + | chr6_1:90686935-90686954 | Msa0898040:intron | 40.0% |
| ! | GATATTTTCACAACTCGTCG+TGG | + | chr6_1:90687013-90687032 | Msa0898040:CDS | 40.0% |
| GCTTCGAATGTTTCTTCTGA+TGG | + | chr6_1:90687073-90687092 | Msa0898040:CDS | 40.0% | |
| TTCTTCTGATGGTATTGCTG+AGG | + | chr6_1:90687084-90687103 | Msa0898040:CDS | 40.0% | |
| TCATGTAGTTGGGACATTGA+CGG | + | chr6_1:90687181-90687200 | Msa0898040:intron | 40.0% | |
| TAAAGGAGCTAGACTAATGG+GGG | + | chr6_1:90688060-90688079 | Msa0898040:CDS | 40.0% | |
| CACGTGATCAATTTAGAGAC+TGG | + | chr6_1:90688089-90688108 | Msa0898040:CDS | 40.0% | |
| ! | AGGCTCGTCCTTGATAATTA+TGG | - | chr6_1:90688192-90688211 | None:intergenic | 40.0% |
| CTCGTGATCTTCAGAATACA+AGG | - | chr6_1:90688236-90688255 | None:intergenic | 40.0% | |
| AGCTAAGATTCCTTATTGCG+TGG | - | chr6_1:90688341-90688360 | None:intergenic | 40.0% | |
| CAGACGACTTAGATTACACA+AGG | + | chr6_1:90688374-90688393 | Msa0898040:intron | 40.0% | |
| CAAACGGTATGTCAATAGCT+TGG | - | chr6_1:90688500-90688519 | None:intergenic | 40.0% | |
| TAACAGCAATTGCTTGAGCT+GGG | + | chr6_1:90688560-90688579 | Msa0898040:intron | 40.0% | |
| ATCTTTCTTGTGTGTTCAGG+AGG | + | chr6_1:90688807-90688826 | Msa0898040:intron | 40.0% | |
| !! | GGGTGCCTTGATTTGTTTCT+GGG | - | chr6_1:90684979-90684998 | None:intergenic | 45.0% |
| GGAAAAGAGAGTGGAGATAC+TGG | - | chr6_1:90685064-90685083 | None:intergenic | 45.0% | |
| AGACACCTGTTGTGATGTAC+CGG | - | chr6_1:90685205-90685224 | None:intergenic | 45.0% | |
| ATCACAACAGGTGTCTGTAC+CGG | + | chr6_1:90685209-90685228 | Msa0898040:CDS | 45.0% | |
| TGATTCGATCCTCTGCAGAT+TGG | + | chr6_1:90685235-90685254 | Msa0898040:CDS | 45.0% | |
| ATTGGCAAGGGAAGAAGAAC+AGG | + | chr6_1:90685253-90685272 | Msa0898040:CDS | 45.0% | |
| !! | ATGTCATGGGGTTGATGATG+TGG | + | chr6_1:90685302-90685321 | Msa0898040:CDS | 45.0% |
| !! | TACCGACTCTTAAGACCTGA+AGG | - | chr6_1:90685906-90685925 | None:intergenic | 45.0% |
| !!! | CGTCGTGGATTAGAGTCTTT+TGG | + | chr6_1:90687028-90687047 | Msa0898040:CDS | 45.0% |
| TCTGATGGTATTGCTGAGGT+TGG | + | chr6_1:90687088-90687107 | Msa0898040:intron | 45.0% | |
| TGAATGCGAGGGATTATCGA+CGG | - | chr6_1:90687164-90687183 | None:intergenic | 45.0% | |
| ATCCCTCGCATTCATGTAGT+TGG | + | chr6_1:90687170-90687189 | Msa0898040:intron | 45.0% | |
| TCCCTCGCATTCATGTAGTT+GGG | + | chr6_1:90687171-90687190 | Msa0898040:intron | 45.0% | |
| TCCCAACTACATGAATGCGA+GGG | - | chr6_1:90687175-90687194 | None:intergenic | 45.0% | |
| GACGGTTGTTGGATCATGAT+CGG | + | chr6_1:90687199-90687218 | Msa0898040:intron | 45.0% | |
| GGATCATGATCGGATACACT+AGG | + | chr6_1:90687209-90687228 | Msa0898040:intron | 45.0% | |
| GTCATTGGATCAAGATCGCA+TGG | - | chr6_1:90687283-90687302 | None:intergenic | 45.0% | |
| ATTCTACGGTAGCACATTGG+TGG | - | chr6_1:90687305-90687324 | None:intergenic | 45.0% | |
| CAATGTGCTACCGTAGAATG+CGG | + | chr6_1:90687306-90687325 | Msa0898040:intron | 45.0% | |
| AATGTGCTACCGTAGAATGC+GGG | + | chr6_1:90687307-90687326 | Msa0898040:intron | 45.0% | |
| !! | AGGCTTGTTAGTGGAAGTTC+TGG | + | chr6_1:90687898-90687917 | Msa0898040:intron | 45.0% |
| AAAGGAGCTAGACTAATGGG+GGG | + | chr6_1:90688061-90688080 | Msa0898040:CDS | 45.0% | |
| AACTACATTGCAGGGAATCC+AGG | - | chr6_1:90688317-90688336 | None:intergenic | 45.0% | |
| TGCGTGGAAACTACATTGCA+GGG | - | chr6_1:90688325-90688344 | None:intergenic | 45.0% | |
| TTGCGTGGAAACTACATTGC+AGG | - | chr6_1:90688326-90688345 | None:intergenic | 45.0% | |
| GTCGAGATATGTAACTGCGT+GGG | + | chr6_1:90688441-90688460 | Msa0898040:intron | 45.0% | |
| GGAGAGTAGATGTACGAAGA+TGG | - | chr6_1:90688470-90688489 | None:intergenic | 45.0% | |
| TGTCAATAGCTTGGGATGTG+AGG | - | chr6_1:90688491-90688510 | None:intergenic | 45.0% | |
| GTAACAGCAATTGCTTGAGC+TGG | + | chr6_1:90688559-90688578 | Msa0898040:intron | 45.0% | |
| CGACTTCTTGCTTACAGACT+GGG | - | chr6_1:90688927-90688946 | None:intergenic | 45.0% | |
| ACGACTTCTTGCTTACAGAC+TGG | - | chr6_1:90688928-90688947 | None:intergenic | 45.0% | |
| AGTCTGTAAGCAAGAAGTCG+TGG | + | chr6_1:90688927-90688946 | Msa0898040:CDS | 45.0% | |
| GTGTCCTGTGATAACAGGCA+TGG | - | chr6_1:90684941-90684960 | None:intergenic | 50.0% | |
| !! | GGGGTGCCTTGATTTGTTTC+TGG | - | chr6_1:90684980-90684999 | None:intergenic | 50.0% |
| GCATCAACCTTCAGAGGACT+CGG | + | chr6_1:90685171-90685190 | Msa0898040:CDS | 50.0% | |
| GATCCTCTGCAGATTGGCAA+GGG | + | chr6_1:90685241-90685260 | Msa0898040:CDS | 50.0% | |
| ! | TGCTGCTGCTGATGTTTCTG+TGG | + | chr6_1:90685371-90685390 | Msa0898040:CDS | 50.0% |
| CGCCTTCAGGTCTTAAGAGT+CGG | + | chr6_1:90685901-90685920 | Msa0898040:intron | 50.0% | |
| TCTACTTCTCTGACGGCAGA+GGG | - | chr6_1:90686495-90686514 | None:intergenic | 50.0% | |
| GTCCCAACTACATGAATGCG+AGG | - | chr6_1:90687176-90687195 | None:intergenic | 50.0% | |
| GTTGGGACATTGACGGTTGT+TGG | + | chr6_1:90687188-90687207 | Msa0898040:intron | 50.0% | |
| ! | GGTAGCACATTGGTGGTCAT+TGG | - | chr6_1:90687298-90687317 | None:intergenic | 50.0% |
| CGCATTCTACGGTAGCACAT+TGG | - | chr6_1:90687308-90687327 | None:intergenic | 50.0% | |
| ATGTGCTACCGTAGAATGCG+GGG | + | chr6_1:90687308-90687327 | Msa0898040:intron | 50.0% | |
| GGTCGAGATATGTAACTGCG+TGG | + | chr6_1:90688440-90688459 | Msa0898040:intron | 50.0% | |
| CTTGAGCTGGGAGAGAGAAT+TGG | + | chr6_1:90688572-90688591 | Msa0898040:CDS | 50.0% | |
| CACCTGTTGTGATGTACCGG+CGG | - | chr6_1:90685202-90685221 | None:intergenic | 55.0% | |
| GCAGAGGATCGAATCACTGC+CGG | - | chr6_1:90685231-90685250 | None:intergenic | 55.0% | |
| CGATCCTCTGCAGATTGGCA+AGG | + | chr6_1:90685240-90685259 | Msa0898040:CDS | 55.0% | |
| CTTCCCTTGCCAATCTGCAG+AGG | - | chr6_1:90685247-90685266 | None:intergenic | 55.0% | |
| !! | CAGGATGTTTGGTGTGGACC+TGG | + | chr6_1:90685330-90685349 | Msa0898040:CDS | 55.0% |
| !! | GTTTGGTGTGGACCTGGAAC+TGG | + | chr6_1:90685336-90685355 | Msa0898040:CDS | 55.0% |
| CGGACATCAAACACGCCTTC+AGG | + | chr6_1:90685888-90685907 | Msa0898040:intron | 55.0% | |
| GTCTACTTCTCTGACGGCAG+AGG | - | chr6_1:90686496-90686515 | None:intergenic | 55.0% | |
| TGTGCTACCGTAGAATGCGG+GGG | + | chr6_1:90687309-90687328 | Msa0898040:intron | 55.0% | |
| AACAACTTTGGCGTGCGTCG+AGG | - | chr6_1:90688212-90688231 | None:intergenic | 55.0% | |
| ! | TGGTTCGACCTTGACTCGAG+TGG | + | chr6_1:90688947-90688966 | Msa0898040:exon | 55.0% |
| GGTGCAACCGAGTCCTCTGA+AGG | - | chr6_1:90685181-90685200 | None:intergenic | 60.0% | |
| CACCGCCGGTACATCACAAC+AGG | + | chr6_1:90685197-90685216 | Msa0898040:CDS | 60.0% | |
| GGGTTACGCCACTCGAGTCA+AGG | - | chr6_1:90688958-90688977 | None:intergenic | 60.0% | |
| ! | AGAGGACTCGGTTGCACCGC+CGG | + | chr6_1:90685183-90685202 | Msa0898040:CDS | 65.0% |
| GCTACCGTAGAATGCGGGGG+TGG | + | chr6_1:90687312-90687331 | Msa0898040:intron | 65.0% | |
| TCGGCCACCCCCGCATTCTA+CGG | - | chr6_1:90687319-90687338 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 90684834 | 90689323 | 90684834 | ID=Msa0898040;Name=Msa0898040 |
| chr6_1 | mRNA | 90684834 | 90689323 | 90684834 | ID=Msa0898040-mRNA-1;Parent=Msa0898040;Name=Msa0898040-mRNA-1;_AED=0.20;_eAED=0.20;_QI=106|1|1|1|1|1|5|363|355 |
| chr6_1 | exon | 90684834 | 90685467 | 90684834 | ID=Msa0898040-mRNA-1:exon:15432;Parent=Msa0898040-mRNA-1 |
| chr6_1 | exon | 90686941 | 90687105 | 90686941 | ID=Msa0898040-mRNA-1:exon:15433;Parent=Msa0898040-mRNA-1 |
| chr6_1 | exon | 90688049 | 90688141 | 90688049 | ID=Msa0898040-mRNA-1:exon:15434;Parent=Msa0898040-mRNA-1 |
| chr6_1 | exon | 90688566 | 90688712 | 90688566 | ID=Msa0898040-mRNA-1:exon:15435;Parent=Msa0898040-mRNA-1 |
| chr6_1 | exon | 90688826 | 90689323 | 90688826 | ID=Msa0898040-mRNA-1:exon:15436;Parent=Msa0898040-mRNA-1 |
| chr6_1 | five_prime_UTR | 90684834 | 90684939 | 90684834 | ID=Msa0898040-mRNA-1:five_prime_utr;Parent=Msa0898040-mRNA-1 |
| chr6_1 | CDS | 90684940 | 90685467 | 90684940 | ID=Msa0898040-mRNA-1:cds;Parent=Msa0898040-mRNA-1 |
| chr6_1 | CDS | 90686941 | 90687105 | 90686941 | ID=Msa0898040-mRNA-1:cds;Parent=Msa0898040-mRNA-1 |
| chr6_1 | CDS | 90688049 | 90688141 | 90688049 | ID=Msa0898040-mRNA-1:cds;Parent=Msa0898040-mRNA-1 |
| chr6_1 | CDS | 90688566 | 90688712 | 90688566 | ID=Msa0898040-mRNA-1:cds;Parent=Msa0898040-mRNA-1 |
| chr6_1 | CDS | 90688826 | 90688960 | 90688826 | ID=Msa0898040-mRNA-1:cds;Parent=Msa0898040-mRNA-1 |
| chr6_1 | three_prime_UTR | 90688961 | 90689323 | 90688961 | ID=Msa0898040-mRNA-1:three_prime_utr;Parent=Msa0898040-mRNA-1 |
| Gene Sequence |
| Protein sequence |
