AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0794970

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0794970 MtrunA17_Chr5g0396811 99.566 692 3 0 1 692 1 692 0.0 1408
Msa0794970 MtrunA17_Chr6g0488381 94.109 696 39 2 1 695 1 695 0.0 1321
Msa0794970 MtrunA17_Chr4g0066781 65.753 365 107 5 329 691 71 419 2.20e-158 463
Msa0794970 MtrunA17_Chr4g0066781 31.804 327 193 12 10 318 5 319 1.01e-28 119
Msa0794970 MtrunA17_Chr7g0254051 75.083 301 61 5 2 297 3 294 4.89e-155 450
Msa0794970 MtrunA17_Chr7g0254051 29.876 241 134 9 383 616 84 296 9.07e-21 93.6
Msa0794970 MtrunA17_Chr7g0254051 24.111 253 139 6 264 516 86 285 4.79e-11 64.3
Msa0794970 MtrunA17_Chr4g0066771 67.614 352 107 4 329 677 82 429 3.90e-154 453
Msa0794970 MtrunA17_Chr4g0066771 30.383 339 202 11 7 318 2 333 1.12e-28 119
Msa0794970 MtrunA17_Chr4g0003621 85.135 74 11 0 268 341 13 86 1.06e-36 132
Msa0794970 MtrunA17_Chr2g0281221 26.235 324 194 11 92 380 436 749 1.02e-17 87.8
Msa0794970 MtrunA17_Chr2g0281221 25.911 247 172 5 90 325 526 772 7.03e-15 78.6
Msa0794970 MtrunA17_Chr4g0003611 77.551 49 9 1 361 409 2 48 1.19e-17 78.2
Msa0794970 MtrunA17_Chr1g0148901 24.686 478 293 17 63 507 225 668 2.06e-13 73.9
Msa0794970 MtrunA17_Chr1g0148901 21.461 438 283 14 93 506 482 882 4.19e-12 69.7
Msa0794970 MtrunA17_Chr7g0242541 22.711 546 325 17 62 546 360 869 5.68e-13 72.8
Msa0794970 MtrunA17_Chr4g0068341 23.102 303 199 6 90 362 220 518 5.26e-12 69.3
Msa0794970 MtrunA17_Chr6g0460371 25.121 207 144 5 113 313 254 455 4.37e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0794970 AT5G41770.1 81.197 702 124 1 2 695 3 704 0.0 1160
Msa0794970 AT5G45990.2 77.339 684 145 2 7 689 4 678 0.0 1075
Msa0794970 AT5G45990.1 77.696 677 141 2 14 689 1 668 0.0 1068
Msa0794970 AT3G13210.1 68.813 699 169 4 1 694 1 655 0.0 941
Msa0794970 AT3G51110.1 74.564 401 99 3 26 423 5 405 0.0 622
Msa0794970 AT3G51110.1 26.346 353 217 11 227 560 73 401 1.08e-19 92.8
Msa0794970 AT3G51110.1 27.541 305 180 12 385 681 73 344 3.95e-19 90.9
Msa0794970 AT4G03430.2 23.892 519 314 16 73 547 369 850 3.09e-17 87.0
Msa0794970 AT4G03430.3 23.892 519 314 16 73 547 369 850 3.09e-17 87.0
Msa0794970 AT4G03430.1 23.892 519 314 16 73 547 369 850 3.09e-17 87.0
Msa0794970 AT5G28740.1 25.382 327 197 14 92 382 424 739 2.41e-16 84.0
Msa0794970 AT1G17760.1 26.316 209 145 5 113 317 254 457 2.51e-13 73.9
Msa0794970 AT3G17040.2 23.284 335 224 13 104 432 181 488 2.26e-11 67.4
Msa0794970 AT3G17040.1 23.284 335 224 13 104 432 215 522 2.70e-11 67.4

Find 183 sgRNAs with CRISPR-Local

Find 381 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAAGCAGCTAAGTCAATTT+TGG 0.148243 5_3:+6867336 Msa0794970:three_prime_UTR
TCTTCTCTTCTTGAGCTTCT+TGG 0.162393 5_3:-6866895 None:intergenic
ACGGGTGCTCGTCAAATATT+AGG 0.182901 5_3:+6865916 Msa0794970:CDS
TACACGTGCGCGTTCGGTTT+GGG 0.226321 5_3:+6862279 Msa0794970:CDS
TAGGGTTGGGTCTGCATCTT+TGG 0.247775 5_3:-6861969 None:intergenic
AAAACTATATGAAAAGTATT+TGG 0.269243 5_3:+6866120 Msa0794970:CDS
GGAAGAGAGTGTCGGGAATA+AGG 0.273700 5_3:+6863005 Msa0794970:CDS
TAGTATGTTACCTTATCTTT+AGG 0.282919 5_3:-6865958 None:intergenic
TACACTCAATAATTGACTTT+TGG 0.285823 5_3:-6867519 None:intergenic
CTTCCTCTTTCTCTATCGTT+AGG 0.293521 5_3:+6861918 Msa0794970:five_prime_UTR
CTCAACTTGGAGGCTTCATC+TGG 0.300668 5_3:+6866834 Msa0794970:CDS
CTTCTCTTCTTGAGCTTCTT+GGG 0.305265 5_3:-6866894 None:intergenic
TTACACGTGCGCGTTCGGTT+TGG 0.307935 5_3:+6862278 Msa0794970:CDS
CTACTGAAGATGGTTCTTCT+AGG 0.309477 5_3:+6866925 Msa0794970:CDS
AGATGAGAGTTTAGAATTAT+CGG 0.314452 5_3:+6866577 Msa0794970:CDS
AGTTCTCATTTGCAAAGATA+TGG 0.344500 5_3:+6865854 Msa0794970:CDS
TTAATCATGCGAGGAATGTT+TGG 0.350016 5_3:+6862380 Msa0794970:CDS
GAGATGCTTGGCAATGTCGC+TGG 0.357091 5_3:+6862466 Msa0794970:CDS
TGCTCCGCTGTGATTTGAAT+TGG 0.358671 5_3:-6862064 None:intergenic
TTCGGTGGAATGTCAGTGTT+TGG 0.362517 5_3:+6862218 Msa0794970:CDS
TCTTTGCAAATGAGAACTTC+TGG 0.364205 5_3:-6865849 None:intergenic
TCAGCTGACGTATTTCAAAC+TGG 0.364851 5_3:-6865888 None:intergenic
AGGATTTAATCCGGAGAGTT+CGG 0.371102 5_3:+6862200 Msa0794970:CDS
CAATGTCGCTGGGGCGAGGC+AGG 0.375002 5_3:+6862477 Msa0794970:CDS
CAAATATTAGGGAATGCTAT+TGG 0.375651 5_3:+6865928 Msa0794970:CDS
GCTTCTTGGGCAGCTTAGAC+TGG 0.380324 5_3:-6866881 None:intergenic
AGAACTTCTGGTGAGGTATC+TGG 0.391393 5_3:-6865837 None:intergenic
GTGGTTTGATTATATAAGAT+TGG 0.396082 5_3:+6862984 Msa0794970:CDS
CAGCTGAGGAGAAGCGATAC+TGG 0.397271 5_3:+6863073 Msa0794970:CDS
ATCCGTTGAATTATGATTCG+TGG 0.398953 5_3:+6862965 Msa0794970:CDS
CGTCATTAAGGAAATGTGTA+AGG 0.403988 5_3:+6867490 Msa0794970:three_prime_UTR
TTGAGAAACAGTATGGTGAT+AGG 0.405534 5_3:+6862878 Msa0794970:CDS
TAATCATGCGAGGAATGTTT+GGG 0.406922 5_3:+6862381 Msa0794970:CDS
TCTCAAATGCCACAAACTTC+CGG 0.412003 5_3:-6862861 None:intergenic
GGCTTCCATGATCTTGAGAT+TGG 0.414299 5_3:-6867206 None:intergenic
TTCCTCTTTCTCTATCGTTA+GGG 0.418812 5_3:+6861919 Msa0794970:five_prime_UTR
ACTTAAGCTACAGTATTTGC+CGG 0.422778 5_3:-6867314 None:intergenic
AGGCATGTCCAATGCTGGTT+GGG 0.424214 5_3:-6866245 None:intergenic
TGATCGAACAAAGCACTTGA+AGG 0.427591 5_3:+6866517 Msa0794970:CDS
GGGATTGAGGATGCTATTGT+TGG 0.433244 5_3:+6862904 Msa0794970:CDS
TGCAATTGCCCAACCAGCAT+TGG 0.442244 5_3:+6866237 Msa0794970:CDS
GGGCAATGCTATTAGAGAAA+TGG 0.442491 5_3:+6866811 Msa0794970:CDS
TCATGGAAGCCGCTTACAAA+TGG 0.446443 5_3:+6867218 Msa0794970:CDS
AGATGCTTGGCAATGTCGCT+GGG 0.449067 5_3:+6862467 Msa0794970:CDS
AAAGAGGAAGAAGACGATAC+AGG 0.450856 5_3:-6861905 None:intergenic
GGAGTTTGAGGAAAGGTGTA+AGG 0.453060 5_3:+6862765 Msa0794970:CDS
TTCGGTTTGGGAACGAGCAT+TGG 0.457130 5_3:+6862291 Msa0794970:CDS
TCAACTTGGAGGCTTCATCT+GGG 0.458678 5_3:+6866835 Msa0794970:CDS
GAGGCTTCATCTGGGGAGCT+AGG 0.458747 5_3:+6866843 Msa0794970:CDS
GATAACCATCCTTGCTGATC+CGG 0.459943 5_3:-6862526 None:intergenic
TGTGGCGTTTGCGGAGTTTG+AGG 0.461569 5_3:+6862753 Msa0794970:CDS
GAGTGAGATAACCTAGGGTT+GGG 0.463081 5_3:-6861982 None:intergenic
CTCGCCGAGTTCGGTTGAAT+CGG 0.463406 5_3:-6862149 None:intergenic
AAGAAGACATGGCTAAGGTT+TGG 0.465348 5_3:-6861946 None:intergenic
TTGGTTGAATGTGTTTCCTC+GGG 0.468573 5_3:-6867187 None:intergenic
TTGGCAATGTCGCTGGGGCG+AGG 0.468746 5_3:+6862473 Msa0794970:CDS
GGCAGCGCTATATTTATTTG+TGG 0.468806 5_3:+6863094 Msa0794970:CDS
TCCAGATTTAAAAGAAGAAA+GGG 0.469041 5_3:+6866791 Msa0794970:CDS
CTCCAGATTTAAAAGAAGAA+AGG 0.471933 5_3:+6866790 Msa0794970:CDS
CGCTGTGATTTGAATTGGAG+CGG 0.473589 5_3:-6862059 None:intergenic
GTGGCATTTGAGAAACAGTA+TGG 0.475591 5_3:+6862871 Msa0794970:CDS
TGCCTGTTTAGAGGTGTTTG+AGG 0.476347 5_3:+6866740 Msa0794970:intron
GGATTTGTACCGGAAGTTTG+TGG 0.478503 5_3:+6862852 Msa0794970:CDS
GTAAGGAGGCAGAGCGTGCT+AGG 0.478780 5_3:+6862782 Msa0794970:CDS
TGGTGATAGGGAAGGGATTG+AGG 0.479307 5_3:+6862891 Msa0794970:CDS
TCAAGCTTCCACGTCCAACT+AGG 0.480728 5_3:+6862020 Msa0794970:CDS
AGACAAGTTTCTACTGAAGA+TGG 0.481734 5_3:+6866915 Msa0794970:CDS
TCATAAACATTCCTCGCCTT+AGG 0.481974 5_3:-6862682 None:intergenic
GAGACGATACTCGCCGAGTT+CGG 0.482763 5_3:-6862158 None:intergenic
CGGGTGCTCGTCAAATATTA+GGG 0.485586 5_3:+6865917 Msa0794970:CDS
TTCAACCAATCTCAAGATCA+TGG 0.485593 5_3:+6867201 Msa0794970:CDS
ATTATCGGAACAAGAACAAA+AGG 0.485892 5_3:+6866592 Msa0794970:CDS
AGGAATTCGAGGATTTAATC+CGG 0.486582 5_3:+6862191 Msa0794970:CDS
CAGTATCGCTTCTCCTCAGC+TGG 0.490512 5_3:-6863072 None:intergenic
AAATCCTCAGCCCTCCCCTT+CGG 0.491990 5_3:-6862835 None:intergenic
GTCATCCTAGGGTTGGTGCT+TGG 0.492213 5_3:+6862620 Msa0794970:CDS
AACAGTATGGTGATAGGGAA+GGG 0.497023 5_3:+6862884 Msa0794970:CDS
AGCAAATTCTTCGTGAAGCT+AGG 0.502033 5_3:+6862083 Msa0794970:CDS
AACTCAGGCATGTCCAATGC+TGG 0.504518 5_3:-6866250 None:intergenic
TAAGATTGGAAGAGAGTGTC+GGG 0.508930 5_3:+6862998 Msa0794970:CDS
ATTGGTTGAATGTGTTTCCT+CGG 0.509385 5_3:-6867188 None:intergenic
CGAGTGAGATAACCTAGGGT+TGG 0.511421 5_3:-6861983 None:intergenic
GAAGAATGGCGAGGTTCCTA+AGG 0.514090 5_3:+6862666 Msa0794970:CDS
GCTGTGATTTGAATTGGAGC+GGG 0.516717 5_3:-6862058 None:intergenic
TGCGGTTACTCTCTTGCCGC+GGG 0.517611 5_3:+6862408 Msa0794970:CDS
CAGCTGACGTATTTCAAACT+GGG 0.517928 5_3:-6865887 None:intergenic
AGAAGACGATACAGGAAAAG+AGG 0.518114 5_3:-6861897 None:intergenic
ATGCTATTGTTGGGAAGAGA+AGG 0.518921 5_3:+6862914 Msa0794970:CDS
GTATCGTCTCCGGAAAAGAA+AGG 0.519406 5_3:+6862171 Msa0794970:CDS
GTGGTATAAGTATATTCATA+TGG 0.521111 5_3:+6862441 Msa0794970:CDS
ATTAGAGAAATGGCTCAACT+TGG 0.521804 5_3:+6866821 Msa0794970:CDS
ATCACCGATTCAACCGAACT+CGG 0.523459 5_3:+6862145 Msa0794970:CDS
AATAAGAGTATCTTGTAGCT+TGG 0.524038 5_3:+6867269 Msa0794970:exon
CTCTATGAAGAACTCGATGC+TGG 0.524471 5_3:+6863232 Msa0794970:CDS
TGGAAAGGCTCCTAAAGATA+AGG 0.526946 5_3:+6865948 Msa0794970:CDS
TGAGAAACAGTATGGTGATA+GGG 0.526975 5_3:+6862879 Msa0794970:CDS
AGAGAAATGGCTCAACTTGG+AGG 0.527102 5_3:+6866824 Msa0794970:CDS
TTTGCCGGGTTATACAAGAA+TGG 0.532683 5_3:-6867299 None:intergenic
CCGGAAAAGAAAGGAATTCG+AGG 0.534313 5_3:+6862180 Msa0794970:CDS
GAACAAAGCACTTGAAGGTA+TGG 0.535144 5_3:+6866522 Msa0794970:CDS
CAAGCTTCCACGTCCAACTA+GGG 0.535750 5_3:+6862021 Msa0794970:CDS
TGACATTCCACCGAACTCTC+CGG 0.537024 5_3:-6862210 None:intergenic
CAGGCATGTCCAATGCTGGT+TGG 0.538335 5_3:-6866246 None:intergenic
GCGAAGTTTGAGATGAAGAA+TGG 0.539929 5_3:+6862652 Msa0794970:CDS
AACCCTAACGATAGAGAAAG+AGG 0.541264 5_3:-6861921 None:intergenic
AAACAGTATGGTGATAGGGA+AGG 0.543304 5_3:+6862883 Msa0794970:CDS
GGATTGAGGATGCTATTGTT+GGG 0.544390 5_3:+6862905 Msa0794970:CDS
ATTCATATGGAGGAGATGCT+TGG 0.545848 5_3:+6862454 Msa0794970:CDS
GAGCAAGAGCGCTTTATGAA+AGG 0.547966 5_3:+6866489 Msa0794970:CDS
TGCACTTGATCATATTCCGA+AGG 0.550436 5_3:+6862819 Msa0794970:CDS
TTGCTTCTTCCATTTGTAAG+CGG 0.551687 5_3:-6867227 None:intergenic
TCGGGAATAAGGAAAGAACT+AGG 0.555595 5_3:+6863016 Msa0794970:CDS
CTTAAGCTACAGTATTTGCC+GGG 0.555956 5_3:-6867313 None:intergenic
TGGACATGCCTGAGTTGTTG+TGG 0.557171 5_3:+6866257 Msa0794970:CDS
TTTGGAAGAAGACATGGCTA+AGG 0.557300 5_3:-6861951 None:intergenic
TTGGATTAAGTATGCACAGT+GGG 0.558600 5_3:+6862237 Msa0794970:CDS
CACCTGAAAATTGCTATGCA+TGG 0.558764 5_3:+6866149 Msa0794970:CDS
AACGAGATTGAACGAGCGAG+AGG 0.562152 5_3:+6862574 Msa0794970:CDS
GTGCGGTTACTCTCTTGCCG+CGG 0.562369 5_3:+6862407 Msa0794970:CDS
GCAAATTCTTCGTGAAGCTA+GGG 0.562667 5_3:+6862084 Msa0794970:CDS
CAACTTGGAGGCTTCATCTG+GGG 0.564192 5_3:+6866836 Msa0794970:CDS
TTCTTAACCCTAGTTGGACG+TGG 0.565614 5_3:-6862028 None:intergenic
CGTTTGCGGAGTTTGAGGAA+AGG 0.569334 5_3:+6862758 Msa0794970:CDS
CTGTGATTTGAATTGGAGCG+GGG 0.569424 5_3:-6862057 None:intergenic
AGAACTCGATGCTGGAGACA+TGG 0.569993 5_3:+6863240 Msa0794970:CDS
ATACGTCAGCTGAATCTCAC+GGG 0.570788 5_3:+6865898 Msa0794970:CDS
ACATACTTCTCGCACGCTGA+AGG 0.571646 5_3:-6866622 None:intergenic
TATTCCGAAGGGGAGGGCTG+AGG 0.571654 5_3:+6862831 Msa0794970:CDS
TTCAGTATGAAGATGAAGTG+AGG 0.574668 5_3:+6862938 Msa0794970:CDS
GAGATGGATGAAATGGATGC+CGG 0.575668 5_3:+6862507 Msa0794970:CDS
ACGAGATTGAACGAGCGAGA+GGG 0.576648 5_3:+6862575 Msa0794970:CDS
GGATGCCGGATCAGCAAGGA+TGG 0.580624 5_3:+6862521 Msa0794970:CDS
GCACTTGATCATATTCCGAA+GGG 0.581118 5_3:+6862820 Msa0794970:CDS
AACTCGGCGAGTATCGTCTC+CGG 0.581315 5_3:+6862161 Msa0794970:CDS
CGTATCCAAGCACCAACCCT+AGG 0.581983 5_3:-6862625 None:intergenic
TGGACGTGGAAGCTTGACTT+CGG 0.584194 5_3:-6862014 None:intergenic
TGCATCTTTGGAAGAAGACA+TGG 0.584680 5_3:-6861957 None:intergenic
TGCTCTATCAAATTCACACT+CGG 0.591262 5_3:-6866471 None:intergenic
GGAGAAGCTAGCGGATGATG+AGG 0.592283 5_3:+6862714 Msa0794970:CDS
ATTAGGGAATGCTATTGGAA+AGG 0.592842 5_3:+6865933 Msa0794970:CDS
ATTAAGGAAATGTGTAAGGT+CGG 0.598325 5_3:+6867494 Msa0794970:three_prime_UTR
ATAAGATTGGAAGAGAGTGT+CGG 0.599092 5_3:+6862997 Msa0794970:CDS
TGCCGCGGGTGGATCAGTTG+TGG 0.601214 5_3:+6862422 Msa0794970:CDS
TGATCATATTCCGAAGGGGA+GGG 0.601416 5_3:+6862825 Msa0794970:CDS
AAAGATGCAGACCCAACCCT+AGG 0.601930 5_3:+6861971 Msa0794970:CDS
TGTACCTTCCACAACAACTC+AGG 0.605321 5_3:-6866265 None:intergenic
GGTTACTCTCTTGCCGCGGG+TGG 0.606774 5_3:+6862411 Msa0794970:CDS
ATTTAATCCGGAGAGTTCGG+TGG 0.620567 5_3:+6862203 Msa0794970:CDS
AGCTAATGTTCCTCCAGCTG+AGG 0.621589 5_3:+6863059 Msa0794970:CDS
GTATAAGTATATTCATATGG+AGG 0.621913 5_3:+6862444 Msa0794970:CDS
CACTTGATCATATTCCGAAG+GGG 0.622291 5_3:+6862821 Msa0794970:CDS
CTGGAGCTGATGATCTGAAG+TGG 0.624411 5_3:-6866773 None:intergenic
ATAAGTTTATTAATCATGCG+AGG 0.627758 5_3:+6862371 Msa0794970:CDS
CGGGAATAAGGAAAGAACTA+GGG 0.627920 5_3:+6863017 Msa0794970:CDS
AATACGTCAGCTGAATCTCA+CGG 0.630113 5_3:+6865897 Msa0794970:CDS
ATAGAGATAGAACTGCAGCT+TGG 0.631167 5_3:+6866079 Msa0794970:CDS
TATCGCTTCTCCTCAGCTGG+AGG 0.632169 5_3:-6863069 None:intergenic
TTGATCATATTCCGAAGGGG+AGG 0.638933 5_3:+6862824 Msa0794970:CDS
GGAGGGCTGAGGATTTGTAC+CGG 0.641247 5_3:+6862842 Msa0794970:CDS
GATTCCATTCTTGTATAACC+CGG 0.642262 5_3:+6867295 Msa0794970:three_prime_UTR
AACCACGAATCATAATTCAA+CGG 0.642901 5_3:-6862967 None:intergenic
GCAAATGAGAACTTCTGGTG+AGG 0.644406 5_3:-6865844 None:intergenic
GTTTGAGGAAAGGTGTAAGG+AGG 0.647717 5_3:+6862768 Msa0794970:CDS
ATGGCGAGGTTCCTAAGGCG+AGG 0.653917 5_3:+6862671 Msa0794970:CDS
TATATGAAAAGTATTTGGAG+TGG 0.655469 5_3:+6866125 Msa0794970:CDS
ATTATAAGAATCATACTCTG+TGG 0.659123 5_3:+6862320 Msa0794970:CDS
TGTGATTTGAATTGGAGCGG+GGG 0.661037 5_3:-6862056 None:intergenic
AAATGGATGCCGGATCAGCA+AGG 0.663884 5_3:+6862517 Msa0794970:CDS
GTTTGAGATGAAGAATGGCG+AGG 0.666538 5_3:+6862657 Msa0794970:CDS
ACAGTGGGAAGAGTCGCAGA+AGG 0.666855 5_3:+6862252 Msa0794970:CDS
CATGCCTGAGTTGTTGTGGA+AGG 0.673647 5_3:+6866261 Msa0794970:CDS
GAATGTTTATGAGAGAGCGG+TGG 0.675482 5_3:+6862693 Msa0794970:CDS
GAGGAATGTTTGGGATCGTG+CGG 0.677707 5_3:+6862390 Msa0794970:CDS
TACCACAACTGATCCACCCG+CGG 0.678557 5_3:-6862424 None:intergenic
GATGCTTGGCAATGTCGCTG+GGG 0.678951 5_3:+6862468 Msa0794970:CDS
AAATTGTGAATTGAAAGTCA+TGG 0.679573 5_3:+6867450 Msa0794970:three_prime_UTR
GAGGAATGTTTATGAGAGAG+CGG 0.686113 5_3:+6862690 Msa0794970:CDS
GAGAGCGGTGGAGAAGCTAG+CGG 0.689654 5_3:+6862705 Msa0794970:CDS
GAATAAGGAAAGAACTAGGG+AGG 0.691859 5_3:+6863020 Msa0794970:CDS
TGGTTGAATGTGTTTCCTCG+GGG 0.698716 5_3:-6867186 None:intergenic
CGCTCCAATTCAAATCACAG+CGG 0.734163 5_3:+6862060 Msa0794970:CDS
TATCGACTATCTATTCCCCG+AGG 0.735748 5_3:+6867171 Msa0794970:CDS
TTTGGATTAAGTATGCACAG+TGG 0.776258 5_3:+6862236 Msa0794970:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAATAGTTGAAATAAAAAT+AGG - chr5_3:6864555-6864574 None:intergenic 10.0%
!! TAAAATTGTTAATATATAAC+AGG + chr5_3:6866427-6866446 Msa0794970:intron 10.0%
!! TACATATTAATAATGACTAT+AGG + chr5_3:6863658-6863677 Msa0794970:intron 15.0%
!!! TTTTCTTGAATTGATAAATT+GGG + chr5_3:6864709-6864728 Msa0794970:intron 15.0%
!!! TCATTTTGAAACAAATTTTT+TGG - chr5_3:6865030-6865049 None:intergenic 15.0%
!!! GATTTTTTATTTTGAAAACT+TGG - chr5_3:6865377-6865396 None:intergenic 15.0%
!!! AAAACTATATGAAAAGTATT+TGG + chr5_3:6866120-6866139 Msa0794970:CDS 15.0%
!!! ATATTAACAATTTTACAGTT+AGG - chr5_3:6866422-6866441 None:intergenic 15.0%
!! AGAGATTTAAATAAAATGCT+TGG - chr5_3:6863310-6863329 None:intergenic 20.0%
!!! TATTTAAATCTCTGTTTTGT+TGG + chr5_3:6863317-6863336 Msa0794970:intron 20.0%
!!! CATTGTAAGCATATTTTTTA+CGG + chr5_3:6863372-6863391 Msa0794970:intron 20.0%
!!! ATTGTAAGCATATTTTTTAC+GGG + chr5_3:6863373-6863392 Msa0794970:intron 20.0%
!!! TAATTAAACCATTCTAAAAG+AGG - chr5_3:6863618-6863637 None:intergenic 20.0%
!! CCTAAATTTGATTGATTAAA+GGG - chr5_3:6864050-6864069 None:intergenic 20.0%
!! TCCTAAATTTGATTGATTAA+AGG - chr5_3:6864051-6864070 None:intergenic 20.0%
!! GCATGAATTATTAATTCAAT+CGG - chr5_3:6864197-6864216 None:intergenic 20.0%
!! TTGAATTAATAATTCATGCT+CGG + chr5_3:6864198-6864217 Msa0794970:intron 20.0%
!! TTATAGTGTAGATAAAATAG+TGG + chr5_3:6864291-6864310 Msa0794970:intron 20.0%
!!! AAAGTCAAGGTTTTAAATTT+TGG - chr5_3:6864467-6864486 None:intergenic 20.0%
!! ATAATTCAAACATAAAGTCA+AGG - chr5_3:6864480-6864499 None:intergenic 20.0%
!! GTTGAAATAAAAATAGGAAT+CGG - chr5_3:6864549-6864568 None:intergenic 20.0%
!!! GTTTTCTTGAATTGATAAAT+TGG + chr5_3:6864708-6864727 Msa0794970:intron 20.0%
!!! TATTTTCCTAGATAATGAAA+TGG + chr5_3:6864832-6864851 Msa0794970:intron 20.0%
!! AAATTTATTACTAACATGTG+TGG - chr5_3:6864954-6864973 None:intergenic 20.0%
!! GTAAGAAATTAAAGTTGTAT+TGG - chr5_3:6865069-6865088 None:intergenic 20.0%
!!! TGTCTTTTTCTTATAAAGTA+AGG + chr5_3:6865157-6865176 Msa0794970:intron 20.0%
!!! GTCTTTTTCTTATAAAGTAA+GGG + chr5_3:6865158-6865177 Msa0794970:intron 20.0%
!! AAATTAATTACTAACATGAG+TGG - chr5_3:6865298-6865317 None:intergenic 20.0%
!! TTTATTGACAAATTTAACAC+AGG - chr5_3:6867079-6867098 None:intergenic 20.0%
! ATTATAAGAATCATACTCTG+TGG + chr5_3:6862320-6862339 Msa0794970:CDS 25.0%
! ATAAGTTTATTAATCATGCG+AGG + chr5_3:6862371-6862390 Msa0794970:CDS 25.0%
! GTGGTATAAGTATATTCATA+TGG + chr5_3:6862441-6862460 Msa0794970:CDS 25.0%
! GTATAAGTATATTCATATGG+AGG + chr5_3:6862444-6862463 Msa0794970:CDS 25.0%
! GTGGTTTGATTATATAAGAT+TGG + chr5_3:6862984-6863003 Msa0794970:CDS 25.0%
!!! ATTGATTTTGCATTTTCTTG+TGG + chr5_3:6863167-6863186 Msa0794970:intron 25.0%
! TATTTGTCTGTGTATAACTT+AGG + chr5_3:6863197-6863216 Msa0794970:intron 25.0%
! AAAAAATATGCTTACAATGC+AGG - chr5_3:6863371-6863390 None:intergenic 25.0%
!!! TTGTAAGCATATTTTTTACG+GGG + chr5_3:6863374-6863393 Msa0794970:intron 25.0%
!!! TAAAATAGCCTCTTTTAGAA+TGG + chr5_3:6863607-6863626 Msa0794970:intron 25.0%
!! ATCAAAAGCACAACAAAAAT+AGG - chr5_3:6864004-6864023 None:intergenic 25.0%
!!! TTTTGTTGTGCTTTTGATAT+TGG + chr5_3:6864006-6864025 Msa0794970:intron 25.0%
! CCCTTTAATCAATCAAATTT+AGG + chr5_3:6864047-6864066 Msa0794970:intron 25.0%
!! AAATTTAGGAGTGTGTATAT+AGG + chr5_3:6864061-6864080 Msa0794970:intron 25.0%
! ATTATAGAAAAAACCAACAC+CGG - chr5_3:6864148-6864167 None:intergenic 25.0%
!!! GTTTTTTCTATAATTGCTTC+TGG + chr5_3:6864154-6864173 Msa0794970:intron 25.0%
!!! AAATAGTGGTTTTTTATGTG+AGG + chr5_3:6864305-6864324 Msa0794970:intron 25.0%
!!! ACACAGTATCTGTTTTTTAT+TGG + chr5_3:6864376-6864395 Msa0794970:intron 25.0%
!! TCGTCTTAATATTTTACTAG+AGG - chr5_3:6864508-6864527 None:intergenic 25.0%
!!! AATCATAGGGTCTATTTTTA+TGG - chr5_3:6864645-6864664 None:intergenic 25.0%
!!! TTTTTGGGAAAACAATCATA+GGG - chr5_3:6864658-6864677 None:intergenic 25.0%
!!! TTTTTTGGGAAAACAATCAT+AGG - chr5_3:6864659-6864678 None:intergenic 25.0%
!!! TTGAAACTTTATGGTTTTGA+TGG + chr5_3:6864767-6864786 Msa0794970:intron 25.0%
!! TTTTTCTTATAAAGTAAGGG+CGG + chr5_3:6865161-6865180 Msa0794970:intron 25.0%
! CGAGTTAATTTAGTAAAAGA+TGG - chr5_3:6865737-6865756 None:intergenic 25.0%
! ACACTACTTTCATTTCTTTA+GGG + chr5_3:6865804-6865823 Msa0794970:intron 25.0%
! TAGTATGTTACCTTATCTTT+AGG - chr5_3:6865961-6865980 None:intergenic 25.0%
! AATATCTGTTGACAGATAAA+AGG - chr5_3:6866049-6866068 None:intergenic 25.0%
!!! TATATGAAAAGTATTTGGAG+TGG + chr5_3:6866125-6866144 Msa0794970:CDS 25.0%
!! TGAGATATTGACATCTATTT+TGG - chr5_3:6866339-6866358 None:intergenic 25.0%
!! AGATGAGAGTTTAGAATTAT+CGG + chr5_3:6866577-6866596 Msa0794970:CDS 25.0%
! TCCAGATTTAAAAGAAGAAA+GGG + chr5_3:6866791-6866810 Msa0794970:CDS 25.0%
!! GACTTTCAATTCACAATTTT+AGG - chr5_3:6867449-6867468 None:intergenic 25.0%
! AAATTGTGAATTGAAAGTCA+TGG + chr5_3:6867450-6867469 Msa0794970:three_prime_UTR 25.0%
!!! TACACTCAATAATTGACTTT+TGG - chr5_3:6867522-6867541 None:intergenic 25.0%
!!! ATTTGTTTTGTGTCATCCTA+GGG + chr5_3:6862609-6862628 Msa0794970:CDS 30.0%
AACCACGAATCATAATTCAA+CGG - chr5_3:6862970-6862989 None:intergenic 30.0%
! ATTAGACTAGCAAGATTTTC+AGG - chr5_3:6863407-6863426 None:intergenic 30.0%
! TTTTTATACCAATGAGGTTG+TGG + chr5_3:6863458-6863477 Msa0794970:intron 30.0%
! TTTTATACCAATGAGGTTGT+GGG + chr5_3:6863459-6863478 Msa0794970:intron 30.0%
!! AAGAGCTTTATGATCTTTTC+TGG + chr5_3:6863563-6863582 Msa0794970:intron 30.0%
!! AGAGCTTTATGATCTTTTCT+GGG + chr5_3:6863564-6863583 Msa0794970:intron 30.0%
TAATAATGACTATAGGTACC+TGG + chr5_3:6863665-6863684 Msa0794970:intron 30.0%
ACTTGATTGTTAGCAATTCT+TGG + chr5_3:6863722-6863741 Msa0794970:intron 30.0%
TGAAAGATGTCAAATAGAGT+AGG + chr5_3:6864119-6864138 Msa0794970:intron 30.0%
GTAAAAACCACTATATACAC+TGG - chr5_3:6864345-6864364 None:intergenic 30.0%
ACTAACTAACTACTACTTGA+GGG - chr5_3:6864413-6864432 None:intergenic 30.0%
AACTAACTAACTACTACTTG+AGG - chr5_3:6864414-6864433 None:intergenic 30.0%
CAAGTAGTAGTTAGTTAGTT+AGG + chr5_3:6864414-6864433 Msa0794970:intron 30.0%
AGTAGTTAGTTAGTTAGGTA+AGG + chr5_3:6864419-6864438 Msa0794970:intron 30.0%
GAATCGGAGAATGAATAATA+GGG - chr5_3:6864533-6864552 None:intergenic 30.0%
TGGTAAGATACATTTCTTGT+GGG + chr5_3:6864595-6864614 Msa0794970:intron 30.0%
! GTTTTCCCAAAAAACATAAG+TGG + chr5_3:6864665-6864684 Msa0794970:intron 30.0%
TCAAGAAAACCAATGTACTA+TGG - chr5_3:6864698-6864717 None:intergenic 30.0%
TTGAATTGATAAATTGGGCT+TGG + chr5_3:6864714-6864733 Msa0794970:intron 30.0%
!! GGGATTGATTTGAAACTTTA+TGG + chr5_3:6864758-6864777 Msa0794970:intron 30.0%
!!! TACTGGTTTTGAGAATAAGA+AGG + chr5_3:6864790-6864809 Msa0794970:intron 30.0%
!! AAGTGACACTCATTTTGAAA+CGG - chr5_3:6865004-6865023 None:intergenic 30.0%
GTATTTATTGAGGGTAAAGT+TGG - chr5_3:6865094-6865113 None:intergenic 30.0%
!! AAGTTGGGAGTATTTATTGA+GGG - chr5_3:6865103-6865122 None:intergenic 30.0%
TTGGCAAACAGATTAAGAAA+TGG - chr5_3:6865223-6865242 None:intergenic 30.0%
CAGTTTGATAGATAGAATAG+TGG + chr5_3:6865403-6865422 Msa0794970:intron 30.0%
GGATAGTGCATATTAAGATT+AGG + chr5_3:6865424-6865443 Msa0794970:intron 30.0%
TAGTGCATATTAAGATTAGG+AGG + chr5_3:6865427-6865446 Msa0794970:intron 30.0%
TATTAAGATTAGGAGGAGAT+TGG + chr5_3:6865434-6865453 Msa0794970:intron 30.0%
!!! CTGTTTTTTTTTACCTTTCC+TGG + chr5_3:6865566-6865585 Msa0794970:intron 30.0%
AGGTTAAACTAGAAAGTCAA+TGG - chr5_3:6865694-6865713 None:intergenic 30.0%
!!! CTTTCTAGTTTAACCTTTTC+TGG + chr5_3:6865698-6865717 Msa0794970:intron 30.0%
AAGTAGTGTCAATACTTAGT+AGG - chr5_3:6865793-6865812 None:intergenic 30.0%
GACACTACTTTCATTTCTTT+AGG + chr5_3:6865803-6865822 Msa0794970:intron 30.0%
AGTTCTCATTTGCAAAGATA+TGG + chr5_3:6865854-6865873 Msa0794970:CDS 30.0%
CAAATATTAGGGAATGCTAT+TGG + chr5_3:6865928-6865947 Msa0794970:CDS 30.0%
AGATGTTTCATAGATATGGT+AGG - chr5_3:6866382-6866401 None:intergenic 30.0%
GCATAGATGTTTCATAGATA+TGG - chr5_3:6866386-6866405 None:intergenic 30.0%
ATTATCGGAACAAGAACAAA+AGG + chr5_3:6866592-6866611 Msa0794970:CDS 30.0%
CTCCAGATTTAAAAGAAGAA+AGG + chr5_3:6866790-6866809 Msa0794970:CDS 30.0%
!! TTTCCAAGGGTTAGTTTATA+TGG + chr5_3:6866981-6867000 Msa0794970:intron 30.0%
CAAATTGAGAAGAATGAAGT+AGG - chr5_3:6867130-6867149 None:intergenic 30.0%
!! CTCAATTTGATTTTGCAGAA+TGG + chr5_3:6867141-6867160 Msa0794970:intron 30.0%
!! AATAAGAGTATCTTGTAGCT+TGG + chr5_3:6867269-6867288 Msa0794970:exon 30.0%
! TTAAGCAGCTAAGTCAATTT+TGG + chr5_3:6867336-6867355 Msa0794970:three_prime_UTR 30.0%
! TAAGCAGCTAAGTCAATTTT+GGG + chr5_3:6867337-6867356 Msa0794970:three_prime_UTR 30.0%
! ACTTGTGATTTTCGTCATTA+AGG + chr5_3:6867478-6867497 Msa0794970:three_prime_UTR 30.0%
ATTAAGGAAATGTGTAAGGT+CGG + chr5_3:6867494-6867513 Msa0794970:three_prime_UTR 30.0%
!!! AACACCTGATTTTTTTTTGC+TGG + chr5_3:6867589-6867608 Msa0794970:three_prime_UTR 30.0%
TCAACCAGCAAAAAAAAATC+AGG - chr5_3:6867596-6867615 None:intergenic 30.0%
TTCCTCTTTCTCTATCGTTA+GGG + chr5_3:6861919-6861938 Msa0794970:five_prime_UTR 35.0%
!!! TTTTCGAGTGAGATAACCTA+GGG - chr5_3:6861990-6862009 None:intergenic 35.0%
!! GTTTTGTTCTTAACCCTAGT+TGG - chr5_3:6862037-6862056 None:intergenic 35.0%
! GAATCGGTGATTTTCTGTTT+CGG - chr5_3:6862136-6862155 None:intergenic 35.0%
AGGAATTCGAGGATTTAATC+CGG + chr5_3:6862191-6862210 Msa0794970:CDS 35.0%
TTTGGATTAAGTATGCACAG+TGG + chr5_3:6862236-6862255 Msa0794970:CDS 35.0%
TTGGATTAAGTATGCACAGT+GGG + chr5_3:6862237-6862256 Msa0794970:CDS 35.0%
TTAATCATGCGAGGAATGTT+TGG + chr5_3:6862380-6862399 Msa0794970:CDS 35.0%
TAATCATGCGAGGAATGTTT+GGG + chr5_3:6862381-6862400 Msa0794970:CDS 35.0%
!! TTTTCGAGAGATGGATGAAA+TGG + chr5_3:6862500-6862519 Msa0794970:CDS 35.0%
!!! GATTTGTTTTGTGTCATCCT+AGG + chr5_3:6862608-6862627 Msa0794970:CDS 35.0%
TTGAGAAACAGTATGGTGAT+AGG + chr5_3:6862878-6862897 Msa0794970:CDS 35.0%
TGAGAAACAGTATGGTGATA+GGG + chr5_3:6862879-6862898 Msa0794970:CDS 35.0%
TTCAGTATGAAGATGAAGTG+AGG + chr5_3:6862938-6862957 Msa0794970:CDS 35.0%
ATCCGTTGAATTATGATTCG+TGG + chr5_3:6862965-6862984 Msa0794970:CDS 35.0%
! ATAAGATTGGAAGAGAGTGT+CGG + chr5_3:6862997-6863016 Msa0794970:CDS 35.0%
AATGCTTGGAAGTTCACAAA+AGG - chr5_3:6863296-6863315 None:intergenic 35.0%
! GCAAGCTTTTTATACCAATG+AGG + chr5_3:6863452-6863471 Msa0794970:intron 35.0%
!!! TGTGGGTTTTGATTCATTCA+CGG + chr5_3:6863476-6863495 Msa0794970:intron 35.0%
TTGATTCATTCACGGTTCTT+AGG + chr5_3:6863484-6863503 Msa0794970:intron 35.0%
CATATTCTCTAACATCAACC+AGG - chr5_3:6863686-6863705 None:intergenic 35.0%
TTCTCAGTTTGTGATTCAGT+TGG + chr5_3:6863920-6863939 Msa0794970:intron 35.0%
!! TTTGAGTTTTGCTGTACTTG+TGG + chr5_3:6863977-6863996 Msa0794970:intron 35.0%
! AGGAGTGTGTATATAGGTTT+AGG + chr5_3:6864067-6864086 Msa0794970:intron 35.0%
TGTATATAGGTTTAGGAGTG+TGG + chr5_3:6864074-6864093 Msa0794970:intron 35.0%
CAGAAGAAAAAGATGTGTAG+TGG + chr5_3:6864263-6864282 Msa0794970:intron 35.0%
CAGTAAACCAGTGTATATAG+TGG + chr5_3:6864335-6864354 Msa0794970:intron 35.0%
GGAATCGGAGAATGAATAAT+AGG - chr5_3:6864534-6864553 None:intergenic 35.0%
GTGGTAAGATACATTTCTTG+TGG + chr5_3:6864594-6864613 Msa0794970:intron 35.0%
TTCCCAAAAAACATAAGTGG+TGG + chr5_3:6864668-6864687 Msa0794970:intron 35.0%
TCCCAAAAAACATAAGTGGT+GGG + chr5_3:6864669-6864688 Msa0794970:intron 35.0%
!!! TCCCACCACTTATGTTTTTT+GGG - chr5_3:6864673-6864692 None:intergenic 35.0%
!!! ATCCCACCACTTATGTTTTT+TGG - chr5_3:6864674-6864693 None:intergenic 35.0%
!!! CTTTATGGTTTTGATGGTAC+TGG + chr5_3:6864773-6864792 Msa0794970:intron 35.0%
CCTTCACCATTTCATTATCT+AGG - chr5_3:6864841-6864860 None:intergenic 35.0%
CCTAGATAATGAAATGGTGA+AGG + chr5_3:6864838-6864857 Msa0794970:intron 35.0%
!! GAAGTTGGGAGTATTTATTG+AGG - chr5_3:6865104-6865123 None:intergenic 35.0%
AATTGTGTGAGAGAGAAGTT+GGG - chr5_3:6865118-6865137 None:intergenic 35.0%
AAATTGTGTGAGAGAGAAGT+TGG - chr5_3:6865119-6865138 None:intergenic 35.0%
!!! ATGAGTGTCGTTTAAGGTTT+TGG - chr5_3:6865242-6865261 None:intergenic 35.0%
!! TTCACAATGAGTGTCGTTTA+AGG - chr5_3:6865248-6865267 None:intergenic 35.0%
AAACGACACTCATTGTGAAA+CGG + chr5_3:6865249-6865268 Msa0794970:intron 35.0%
TTTGTTGACCATCTATCAAC+AGG + chr5_3:6865345-6865364 Msa0794970:intron 35.0%
GTCAATCTCTGAATCAAATG+TGG - chr5_3:6865543-6865562 None:intergenic 35.0%
! TATATCTAGAATACCCGTGA+TGG - chr5_3:6865605-6865624 None:intergenic 35.0%
TCTTTGCAAATGAGAACTTC+TGG - chr5_3:6865852-6865871 None:intergenic 35.0%
ATTAGGGAATGCTATTGGAA+AGG + chr5_3:6865933-6865952 Msa0794970:CDS 35.0%
AGGCATATGTGAAGTTAACT+AGG - chr5_3:6866029-6866048 None:intergenic 35.0%
! TTTGGTGATAGCCTGATATT+TGG - chr5_3:6866321-6866340 None:intergenic 35.0%
ATATGGTAGGAAACTAGTAG+AGG - chr5_3:6866369-6866388 None:intergenic 35.0%
TATGAAACATCTATGCATGC+TGG + chr5_3:6866390-6866409 Msa0794970:intron 35.0%
TGCTCTATCAAATTCACACT+CGG - chr5_3:6866474-6866493 None:intergenic 35.0%
!!! TTTGTTTTGTGCCTGTTTAG+AGG + chr5_3:6866731-6866750 Msa0794970:intron 35.0%
! GCCCTTTCTTCTTTTAAATC+TGG - chr5_3:6866795-6866814 None:intergenic 35.0%
ATTAGAGAAATGGCTCAACT+TGG + chr5_3:6866821-6866840 Msa0794970:CDS 35.0%
AGACAAGTTTCTACTGAAGA+TGG + chr5_3:6866915-6866934 Msa0794970:CDS 35.0%
CAGTGACAAAATTGCAAACA+AGG - chr5_3:6867007-6867026 None:intergenic 35.0%
!! ATTTTGTCACTGCTAGTTTC+TGG + chr5_3:6867015-6867034 Msa0794970:intron 35.0%
! TTTCTGGTATCGTTAGCATT+AGG + chr5_3:6867031-6867050 Msa0794970:intron 35.0%
ATTGGTTGAATGTGTTTCCT+CGG - chr5_3:6867191-6867210 None:intergenic 35.0%
TTCAACCAATCTCAAGATCA+TGG + chr5_3:6867201-6867220 Msa0794970:CDS 35.0%
TTGCTTCTTCCATTTGTAAG+CGG - chr5_3:6867230-6867249 None:intergenic 35.0%
GATTCCATTCTTGTATAACC+CGG + chr5_3:6867295-6867314 Msa0794970:three_prime_UTR 35.0%
ACTTAAGCTACAGTATTTGC+CGG - chr5_3:6867317-6867336 None:intergenic 35.0%
CGTCATTAAGGAAATGTGTA+AGG + chr5_3:6867490-6867509 Msa0794970:three_prime_UTR 35.0%
AGAAGACGATACAGGAAAAG+AGG - chr5_3:6861900-6861919 None:intergenic 40.0%
AAAGAGGAAGAAGACGATAC+AGG - chr5_3:6861908-6861927 None:intergenic 40.0%
CTTCCTCTTTCTCTATCGTT+AGG + chr5_3:6861918-6861937 Msa0794970:five_prime_UTR 40.0%
AACCCTAACGATAGAGAAAG+AGG - chr5_3:6861924-6861943 None:intergenic 40.0%
AAGAAGACATGGCTAAGGTT+TGG - chr5_3:6861949-6861968 None:intergenic 40.0%
TTTGGAAGAAGACATGGCTA+AGG - chr5_3:6861954-6861973 None:intergenic 40.0%
! TGCATCTTTGGAAGAAGACA+TGG - chr5_3:6861960-6861979 None:intergenic 40.0%
!!! CTTTTCGAGTGAGATAACCT+AGG - chr5_3:6861991-6862010 None:intergenic 40.0%
AGCAAATTCTTCGTGAAGCT+AGG + chr5_3:6862083-6862102 Msa0794970:CDS 40.0%
GCAAATTCTTCGTGAAGCTA+GGG + chr5_3:6862084-6862103 Msa0794970:CDS 40.0%
! TGATTTTCTGTTTCGGAGGA+CGG - chr5_3:6862129-6862148 None:intergenic 40.0%
! CCTCGAATTCCTTTCTTTTC+CGG - chr5_3:6862183-6862202 None:intergenic 40.0%
AGGATTTAATCCGGAGAGTT+CGG + chr5_3:6862200-6862219 Msa0794970:CDS 40.0%
ATTCATATGGAGGAGATGCT+TGG + chr5_3:6862454-6862473 Msa0794970:CDS 40.0%
! GCGAAGTTTGAGATGAAGAA+TGG + chr5_3:6862652-6862671 Msa0794970:CDS 40.0%
TCATAAACATTCCTCGCCTT+AGG - chr5_3:6862685-6862704 None:intergenic 40.0%
GAGGAATGTTTATGAGAGAG+CGG + chr5_3:6862690-6862709 Msa0794970:CDS 40.0%
TGCACTTGATCATATTCCGA+AGG + chr5_3:6862819-6862838 Msa0794970:CDS 40.0%
GCACTTGATCATATTCCGAA+GGG + chr5_3:6862820-6862839 Msa0794970:CDS 40.0%
CACTTGATCATATTCCGAAG+GGG + chr5_3:6862821-6862840 Msa0794970:CDS 40.0%
TCTCAAATGCCACAAACTTC+CGG - chr5_3:6862864-6862883 None:intergenic 40.0%
GTGGCATTTGAGAAACAGTA+TGG + chr5_3:6862871-6862890 Msa0794970:CDS 40.0%
AAACAGTATGGTGATAGGGA+AGG + chr5_3:6862883-6862902 Msa0794970:CDS 40.0%
AACAGTATGGTGATAGGGAA+GGG + chr5_3:6862884-6862903 Msa0794970:CDS 40.0%
GGATTGAGGATGCTATTGTT+GGG + chr5_3:6862905-6862924 Msa0794970:CDS 40.0%
ATGCTATTGTTGGGAAGAGA+AGG + chr5_3:6862914-6862933 Msa0794970:CDS 40.0%
!! TAAGATTGGAAGAGAGTGTC+GGG + chr5_3:6862998-6863017 Msa0794970:CDS 40.0%
TCGGGAATAAGGAAAGAACT+AGG + chr5_3:6863016-6863035 Msa0794970:CDS 40.0%
CGGGAATAAGGAAAGAACTA+GGG + chr5_3:6863017-6863036 Msa0794970:CDS 40.0%
GAATAAGGAAAGAACTAGGG+AGG + chr5_3:6863020-6863039 Msa0794970:CDS 40.0%
GGCAGCGCTATATTTATTTG+TGG + chr5_3:6863094-6863113 Msa0794970:CDS 40.0%
CTTACAATGCAGGAAAAGCA+TGG - chr5_3:6863361-6863380 None:intergenic 40.0%
ATCAAAACCCACAACCTCAT+TGG - chr5_3:6863469-6863488 None:intergenic 40.0%
!!! GGATACTGTTTTTAGAGCAG+TGG + chr5_3:6863510-6863529 Msa0794970:intron 40.0%
TCTTGCATCAAACAAAGAGG+AGG - chr5_3:6863547-6863566 None:intergenic 40.0%
AGCTCTTGCATCAAACAAAG+AGG - chr5_3:6863550-6863569 None:intergenic 40.0%
CATCACTAGCACTTCAACTT+TGG - chr5_3:6863817-6863836 None:intergenic 40.0%
AGTGCTAGTGATGTACCTTA+AGG + chr5_3:6863824-6863843 Msa0794970:intron 40.0%
TGTAAGAACGCTAGACCTTA+AGG - chr5_3:6863842-6863861 None:intergenic 40.0%
TGTCAAATAGAGTAGGAGAC+CGG + chr5_3:6864126-6864145 Msa0794970:intron 40.0%
GTTAAGATAGATGCTCAACG+TGG + chr5_3:6864575-6864594 Msa0794970:intron 40.0%
!! AAATTGGGCTTGGTTTGCAT+TGG + chr5_3:6864724-6864743 Msa0794970:intron 40.0%
CATTCTGAGTGCTTGATATG+TGG + chr5_3:6864887-6864906 Msa0794970:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr5_3:6865000-6865019 None:intergenic 40.0%
!!! TGACACTCATTTTGAAACGG+AGG - chr5_3:6865001-6865020 None:intergenic 40.0%
AACGACACTCATTGTGAAAC+GGG + chr5_3:6865250-6865269 Msa0794970:intron 40.0%
! GGTATCAACCTGTTGATAGA+TGG - chr5_3:6865356-6865375 None:intergenic 40.0%
!!! GATTGGAGAGGTTTTAGACT+TGG + chr5_3:6865451-6865470 Msa0794970:intron 40.0%
!!! AGAGGTTTTAGACTTGGACT+AGG + chr5_3:6865457-6865476 Msa0794970:intron 40.0%
CAAGAGCAAAGAAGTTGTAC+AGG - chr5_3:6865511-6865530 None:intergenic 40.0%
CAATAGAACTCAACCAGGAA+AGG - chr5_3:6865582-6865601 None:intergenic 40.0%
GTTGAGTTCTATTGCCATCA+CGG + chr5_3:6865588-6865607 Msa0794970:intron 40.0%
TTGAGTTCTATTGCCATCAC+GGG + chr5_3:6865589-6865608 Msa0794970:intron 40.0%
GTAAAAGATGGCAATAGAGC+TGG - chr5_3:6865725-6865744 None:intergenic 40.0%
CAGCTGACGTATTTCAAACT+GGG - chr5_3:6865890-6865909 None:intergenic 40.0%
TCAGCTGACGTATTTCAAAC+TGG - chr5_3:6865891-6865910 None:intergenic 40.0%
AATACGTCAGCTGAATCTCA+CGG + chr5_3:6865897-6865916 Msa0794970:CDS 40.0%
TGGAAAGGCTCCTAAAGATA+AGG + chr5_3:6865948-6865967 Msa0794970:CDS 40.0%
ATAGAGATAGAACTGCAGCT+TGG + chr5_3:6866079-6866098 Msa0794970:CDS 40.0%
CACCTGAAAATTGCTATGCA+TGG + chr5_3:6866149-6866168 Msa0794970:CDS 40.0%
! CTCCATGCATAGCAATTTTC+AGG - chr5_3:6866154-6866173 None:intergenic 40.0%
CTGTACAAGAGCCAAATATC+AGG + chr5_3:6866307-6866326 Msa0794970:intron 40.0%
! TGATCGAACAAAGCACTTGA+AGG + chr5_3:6866517-6866536 Msa0794970:CDS 40.0%
! GAACAAAGCACTTGAAGGTA+TGG + chr5_3:6866522-6866541 Msa0794970:CDS 40.0%
ATCCTCAAACACCTCTAAAC+AGG - chr5_3:6866745-6866764 None:intergenic 40.0%
GGGCAATGCTATTAGAGAAA+TGG + chr5_3:6866811-6866830 Msa0794970:CDS 40.0%
CTTCTCTTCTTGAGCTTCTT+GGG - chr5_3:6866897-6866916 None:intergenic 40.0%
TCTTCTCTTCTTGAGCTTCT+TGG - chr5_3:6866898-6866917 None:intergenic 40.0%
CTACTGAAGATGGTTCTTCT+AGG + chr5_3:6866925-6866944 Msa0794970:CDS 40.0%
ACTCATTGTTTGTCTTCGAG+TGG + chr5_3:6866958-6866977 Msa0794970:intron 40.0%
AGGCCATATAAACTAACCCT+TGG - chr5_3:6866987-6867006 None:intergenic 40.0%
TTGGTTGAATGTGTTTCCTC+GGG - chr5_3:6867190-6867209 None:intergenic 40.0%
TTTGCCGGGTTATACAAGAA+TGG - chr5_3:6867302-6867321 None:intergenic 40.0%
CTTAAGCTACAGTATTTGCC+GGG - chr5_3:6867316-6867335 None:intergenic 40.0%
!! TTGCTGGTTGATTTTGCTGA+AGG + chr5_3:6867605-6867624 Msa0794970:three_prime_UTR 40.0%
GAGTGAGATAACCTAGGGTT+GGG - chr5_3:6861985-6862004 None:intergenic 45.0%
TTCTTAACCCTAGTTGGACG+TGG - chr5_3:6862031-6862050 None:intergenic 45.0%
TGTGATTTGAATTGGAGCGG+GGG - chr5_3:6862059-6862078 None:intergenic 45.0%
CTGTGATTTGAATTGGAGCG+GGG - chr5_3:6862060-6862079 None:intergenic 45.0%
GCTGTGATTTGAATTGGAGC+GGG - chr5_3:6862061-6862080 None:intergenic 45.0%
CGCTGTGATTTGAATTGGAG+CGG - chr5_3:6862062-6862081 None:intergenic 45.0%
CGCTCCAATTCAAATCACAG+CGG + chr5_3:6862060-6862079 Msa0794970:CDS 45.0%
TGCTCCGCTGTGATTTGAAT+TGG - chr5_3:6862067-6862086 None:intergenic 45.0%
! TCGGTGATTTTCTGTTTCGG+AGG - chr5_3:6862133-6862152 None:intergenic 45.0%
!! ATCACCGATTCAACCGAACT+CGG + chr5_3:6862145-6862164 Msa0794970:CDS 45.0%
GTATCGTCTCCGGAAAAGAA+AGG + chr5_3:6862171-6862190 Msa0794970:CDS 45.0%
CCGGAAAAGAAAGGAATTCG+AGG + chr5_3:6862180-6862199 Msa0794970:CDS 45.0%
ATTTAATCCGGAGAGTTCGG+TGG + chr5_3:6862203-6862222 Msa0794970:CDS 45.0%
TTCGGTGGAATGTCAGTGTT+TGG + chr5_3:6862218-6862237 Msa0794970:CDS 45.0%
GAGATGGATGAAATGGATGC+CGG + chr5_3:6862507-6862526 Msa0794970:CDS 45.0%
GATAACCATCCTTGCTGATC+CGG - chr5_3:6862529-6862548 None:intergenic 45.0%
! GTTTTGTGTCATCCTAGGGT+TGG + chr5_3:6862613-6862632 Msa0794970:CDS 45.0%
! GTTTGAGATGAAGAATGGCG+AGG + chr5_3:6862657-6862676 Msa0794970:CDS 45.0%
GAATGTTTATGAGAGAGCGG+TGG + chr5_3:6862693-6862712 Msa0794970:CDS 45.0%
! GGAGTTTGAGGAAAGGTGTA+AGG + chr5_3:6862765-6862784 Msa0794970:CDS 45.0%
! GTTTGAGGAAAGGTGTAAGG+AGG + chr5_3:6862768-6862787 Msa0794970:CDS 45.0%
TTGATCATATTCCGAAGGGG+AGG + chr5_3:6862824-6862843 Msa0794970:CDS 45.0%
TGATCATATTCCGAAGGGGA+GGG + chr5_3:6862825-6862844 Msa0794970:CDS 45.0%
GGATTTGTACCGGAAGTTTG+TGG + chr5_3:6862852-6862871 Msa0794970:CDS 45.0%
GGGATTGAGGATGCTATTGT+TGG + chr5_3:6862904-6862923 Msa0794970:CDS 45.0%
CTCTATGAAGAACTCGATGC+TGG + chr5_3:6863232-6863251 Msa0794970:CDS 45.0%
TTCATTCACGGTTCTTAGGC+TGG + chr5_3:6863488-6863507 Msa0794970:intron 45.0%
TCATTCACGGTTCTTAGGCT+GGG + chr5_3:6863489-6863508 Msa0794970:intron 45.0%
! AGGTTTAGGAGTGTGGATAC+TGG + chr5_3:6864081-6864100 Msa0794970:intron 45.0%
! TGGATACTGGAGTGTTCATG+TGG + chr5_3:6864094-6864113 Msa0794970:intron 45.0%
GTAAGGCTCTCAACTTAGAG+TGG + chr5_3:6864436-6864455 Msa0794970:intron 45.0%
GGTGGGATTCCATAGTACAT+TGG + chr5_3:6864686-6864705 Msa0794970:intron 45.0%
ACGACACTCATTGTGAAACG+GGG + chr5_3:6865251-6865270 Msa0794970:intron 45.0%
AGATTAGGAGGAGATTGGAG+AGG + chr5_3:6865439-6865458 Msa0794970:intron 45.0%
GATGGCAATAGAACTCAACC+AGG - chr5_3:6865587-6865606 None:intergenic 45.0%
CAATAGAGCTGGACCAGAAA+AGG - chr5_3:6865714-6865733 None:intergenic 45.0%
! AGAACTTCTGGTGAGGTATC+TGG - chr5_3:6865840-6865859 None:intergenic 45.0%
GCAAATGAGAACTTCTGGTG+AGG - chr5_3:6865847-6865866 None:intergenic 45.0%
ATACGTCAGCTGAATCTCAC+GGG + chr5_3:6865898-6865917 Msa0794970:CDS 45.0%
ACGGGTGCTCGTCAAATATT+AGG + chr5_3:6865916-6865935 Msa0794970:CDS 45.0%
CGGGTGCTCGTCAAATATTA+GGG + chr5_3:6865917-6865936 Msa0794970:CDS 45.0%
TGTACCTTCCACAACAACTC+AGG - chr5_3:6866268-6866287 None:intergenic 45.0%
!! GAGCAAGAGCGCTTTATGAA+AGG + chr5_3:6866489-6866508 Msa0794970:CDS 45.0%
!! TGCCTGTTTAGAGGTGTTTG+AGG + chr5_3:6866740-6866759 Msa0794970:intron 45.0%
AGAGAAATGGCTCAACTTGG+AGG + chr5_3:6866824-6866843 Msa0794970:CDS 45.0%
TCAACTTGGAGGCTTCATCT+GGG + chr5_3:6866835-6866854 Msa0794970:CDS 45.0%
TTGTCTTCGAGTGGTTTCCA+AGG + chr5_3:6866967-6866986 Msa0794970:intron 45.0%
TGTCTTCGAGTGGTTTCCAA+GGG + chr5_3:6866968-6866987 Msa0794970:intron 45.0%
GGTATCGTTAGCATTAGGCT+TGG + chr5_3:6867036-6867055 Msa0794970:intron 45.0%
! TATCGACTATCTATTCCCCG+AGG + chr5_3:6867171-6867190 Msa0794970:CDS 45.0%
TGGTTGAATGTGTTTCCTCG+GGG - chr5_3:6867189-6867208 None:intergenic 45.0%
GGCTTCCATGATCTTGAGAT+TGG - chr5_3:6867209-6867228 None:intergenic 45.0%
TCATGGAAGCCGCTTACAAA+TGG + chr5_3:6867218-6867237 Msa0794970:CDS 45.0%
TAGGGTTGGGTCTGCATCTT+TGG - chr5_3:6861972-6861991 None:intergenic 50.0%
AAAGATGCAGACCCAACCCT+AGG + chr5_3:6861971-6861990 Msa0794970:CDS 50.0%
CGAGTGAGATAACCTAGGGT+TGG - chr5_3:6861986-6862005 None:intergenic 50.0%
TGGACGTGGAAGCTTGACTT+CGG - chr5_3:6862017-6862036 None:intergenic 50.0%
TCAAGCTTCCACGTCCAACT+AGG + chr5_3:6862020-6862039 Msa0794970:CDS 50.0%
CAAGCTTCCACGTCCAACTA+GGG + chr5_3:6862021-6862040 Msa0794970:CDS 50.0%
TGACATTCCACCGAACTCTC+CGG - chr5_3:6862213-6862232 None:intergenic 50.0%
! GGATTTTACACGTGCGCGTT+CGG + chr5_3:6862273-6862292 Msa0794970:CDS 50.0%
!! TTCGGTTTGGGAACGAGCAT+TGG + chr5_3:6862291-6862310 Msa0794970:CDS 50.0%
! GAGGAATGTTTGGGATCGTG+CGG + chr5_3:6862390-6862409 Msa0794970:CDS 50.0%
AGATGCTTGGCAATGTCGCT+GGG + chr5_3:6862467-6862486 Msa0794970:CDS 50.0%
AAATGGATGCCGGATCAGCA+AGG + chr5_3:6862517-6862536 Msa0794970:CDS 50.0%
AACGAGATTGAACGAGCGAG+AGG + chr5_3:6862574-6862593 Msa0794970:CDS 50.0%
ACGAGATTGAACGAGCGAGA+GGG + chr5_3:6862575-6862594 Msa0794970:CDS 50.0%
GAAGAATGGCGAGGTTCCTA+AGG + chr5_3:6862666-6862685 Msa0794970:CDS 50.0%
!!! GGAAGCAGAGCTGCTTTTTG+TGG + chr5_3:6862735-6862754 Msa0794970:CDS 50.0%
!!! GCTGCTTTTTGTGGCGTTTG+CGG + chr5_3:6862744-6862763 Msa0794970:CDS 50.0%
CGTTTGCGGAGTTTGAGGAA+AGG + chr5_3:6862758-6862777 Msa0794970:CDS 50.0%
TGGTGATAGGGAAGGGATTG+AGG + chr5_3:6862891-6862910 Msa0794970:CDS 50.0%
!! GGAAGAGAGTGTCGGGAATA+AGG + chr5_3:6863005-6863024 Msa0794970:CDS 50.0%
AGCTAATGTTCCTCCAGCTG+AGG + chr5_3:6863059-6863078 Msa0794970:CDS 50.0%
AGAACTCGATGCTGGAGACA+TGG + chr5_3:6863240-6863259 Msa0794970:CDS 50.0%
ATAGAGTAGGAGACCGGTGT+TGG + chr5_3:6864132-6864151 Msa0794970:intron 50.0%
!! TTTGCATTGGCTGGGAGCAT+TGG + chr5_3:6864737-6864756 Msa0794970:intron 50.0%
!! TTGCATTGGCTGGGAGCATT+GGG + chr5_3:6864738-6864757 Msa0794970:intron 50.0%
GTTCTACAGAGAGGGCAACT+AGG - chr5_3:6864925-6864944 None:intergenic 50.0%
GGAGCGAAGTTCTACAGAGA+GGG - chr5_3:6864933-6864952 None:intergenic 50.0%
TGGAGCGAAGTTCTACAGAG+AGG - chr5_3:6864934-6864953 None:intergenic 50.0%
CGACACTCATTGTGAAACGG+GGG + chr5_3:6865252-6865271 Msa0794970:intron 50.0%
GACACTCATTGTGAAACGGG+GGG + chr5_3:6865253-6865272 Msa0794970:intron 50.0%
TGCAATTGCCCAACCAGCAT+TGG + chr5_3:6866237-6866256 Msa0794970:CDS 50.0%
! AGGCATGTCCAATGCTGGTT+GGG - chr5_3:6866248-6866267 None:intergenic 50.0%
AACTCAGGCATGTCCAATGC+TGG - chr5_3:6866253-6866272 None:intergenic 50.0%
TGGACATGCCTGAGTTGTTG+TGG + chr5_3:6866257-6866276 Msa0794970:CDS 50.0%
CATGCCTGAGTTGTTGTGGA+AGG + chr5_3:6866261-6866280 Msa0794970:CDS 50.0%
ACATACTTCTCGCACGCTGA+AGG - chr5_3:6866625-6866644 None:intergenic 50.0%
CTGGAGCTGATGATCTGAAG+TGG - chr5_3:6866776-6866795 None:intergenic 50.0%
CTCAACTTGGAGGCTTCATC+TGG + chr5_3:6866834-6866853 Msa0794970:CDS 50.0%
CAACTTGGAGGCTTCATCTG+GGG + chr5_3:6866836-6866855 Msa0794970:CDS 50.0%
CTCGCCGAGTTCGGTTGAAT+CGG - chr5_3:6862152-6862171 None:intergenic 55.0%
GAGACGATACTCGCCGAGTT+CGG - chr5_3:6862161-6862180 None:intergenic 55.0%
! AACTCGGCGAGTATCGTCTC+CGG + chr5_3:6862161-6862180 Msa0794970:CDS 55.0%
ACAGTGGGAAGAGTCGCAGA+AGG + chr5_3:6862252-6862271 Msa0794970:CDS 55.0%
TTACACGTGCGCGTTCGGTT+TGG + chr5_3:6862278-6862297 Msa0794970:CDS 55.0%
TACACGTGCGCGTTCGGTTT+GGG + chr5_3:6862279-6862298 Msa0794970:CDS 55.0%
TACCACAACTGATCCACCCG+CGG - chr5_3:6862427-6862446 None:intergenic 55.0%
GAGATGCTTGGCAATGTCGC+TGG + chr5_3:6862466-6862485 Msa0794970:CDS 55.0%
GATGCTTGGCAATGTCGCTG+GGG + chr5_3:6862468-6862487 Msa0794970:CDS 55.0%
!! CGAGGCAGGTTTTCGAGAGA+TGG + chr5_3:6862491-6862510 Msa0794970:CDS 55.0%
!! GTCATCCTAGGGTTGGTGCT+TGG + chr5_3:6862620-6862639 Msa0794970:CDS 55.0%
CGTATCCAAGCACCAACCCT+AGG - chr5_3:6862628-6862647 None:intergenic 55.0%
! GGAGAAGCTAGCGGATGATG+AGG + chr5_3:6862714-6862733 Msa0794970:CDS 55.0%
TGTGGCGTTTGCGGAGTTTG+AGG + chr5_3:6862753-6862772 Msa0794970:CDS 55.0%
AAATCCTCAGCCCTCCCCTT+CGG - chr5_3:6862838-6862857 None:intergenic 55.0%
GGAGGGCTGAGGATTTGTAC+CGG + chr5_3:6862842-6862861 Msa0794970:CDS 55.0%
TATCGCTTCTCCTCAGCTGG+AGG - chr5_3:6863072-6863091 None:intergenic 55.0%
CAGTATCGCTTCTCCTCAGC+TGG - chr5_3:6863075-6863094 None:intergenic 55.0%
CAGCTGAGGAGAAGCGATAC+TGG + chr5_3:6863073-6863092 Msa0794970:CDS 55.0%
!! TGGGCTTGGTTTGCATTGGC+TGG + chr5_3:6864728-6864747 Msa0794970:intron 55.0%
!! GGGCTTGGTTTGCATTGGCT+GGG + chr5_3:6864729-6864748 Msa0794970:intron 55.0%
CAGGCATGTCCAATGCTGGT+TGG - chr5_3:6866249-6866268 None:intergenic 55.0%
GTGCGGTTACTCTCTTGCCG+CGG + chr5_3:6862407-6862426 Msa0794970:CDS 60.0%
TGCGGTTACTCTCTTGCCGC+GGG + chr5_3:6862408-6862427 Msa0794970:CDS 60.0%
GGATGCCGGATCAGCAAGGA+TGG + chr5_3:6862521-6862540 Msa0794970:CDS 60.0%
ATGGCGAGGTTCCTAAGGCG+AGG + chr5_3:6862671-6862690 Msa0794970:CDS 60.0%
GAGAGCGGTGGAGAAGCTAG+CGG + chr5_3:6862705-6862724 Msa0794970:CDS 60.0%
GTAAGGAGGCAGAGCGTGCT+AGG + chr5_3:6862782-6862801 Msa0794970:CDS 60.0%
TATTCCGAAGGGGAGGGCTG+AGG + chr5_3:6862831-6862850 Msa0794970:CDS 60.0%
GAGGCTTCATCTGGGGAGCT+AGG + chr5_3:6866843-6866862 Msa0794970:CDS 60.0%
GGTTACTCTCTTGCCGCGGG+TGG + chr5_3:6862411-6862430 Msa0794970:CDS 65.0%
TGCCGCGGGTGGATCAGTTG+TGG + chr5_3:6862422-6862441 Msa0794970:CDS 65.0%
TTGGCAATGTCGCTGGGGCG+AGG + chr5_3:6862473-6862492 Msa0794970:CDS 65.0%
CAATGTCGCTGGGGCGAGGC+AGG + chr5_3:6862477-6862496 Msa0794970:CDS 70.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 6861891 6867636 6861891 ID=Msa0794970;Name=Msa0794970
chr5_3 mRNA 6861891 6867636 6861891 ID=Msa0794970-mRNA-1;Parent=Msa0794970;Name=Msa0794970-mRNA-1;_AED=0.04;_eAED=0.04;_QI=68|1|1|1|1|1|7|363|695
chr5_3 exon 6861891 6863115 6861891 ID=Msa0794970-mRNA-1:exon:2767;Parent=Msa0794970-mRNA-1
chr5_3 exon 6863219 6863284 6863219 ID=Msa0794970-mRNA-1:exon:2768;Parent=Msa0794970-mRNA-1
chr5_3 exon 6865825 6865969 6865825 ID=Msa0794970-mRNA-1:exon:2769;Parent=Msa0794970-mRNA-1
chr5_3 exon 6866064 6866282 6866064 ID=Msa0794970-mRNA-1:exon:2770;Parent=Msa0794970-mRNA-1
chr5_3 exon 6866449 6866638 6866449 ID=Msa0794970-mRNA-1:exon:2771;Parent=Msa0794970-mRNA-1
chr5_3 exon 6866751 6866946 6866751 ID=Msa0794970-mRNA-1:exon:2772;Parent=Msa0794970-mRNA-1
chr5_3 exon 6867159 6867636 6867159 ID=Msa0794970-mRNA-1:exon:2773;Parent=Msa0794970-mRNA-1
chr5_3 five_prime_UTR 6861891 6861958 6861891 ID=Msa0794970-mRNA-1:five_prime_utr;Parent=Msa0794970-mRNA-1
chr5_3 CDS 6861959 6863115 6861959 ID=Msa0794970-mRNA-1:cds;Parent=Msa0794970-mRNA-1
chr5_3 CDS 6863219 6863284 6863219 ID=Msa0794970-mRNA-1:cds;Parent=Msa0794970-mRNA-1
chr5_3 CDS 6865825 6865969 6865825 ID=Msa0794970-mRNA-1:cds;Parent=Msa0794970-mRNA-1
chr5_3 CDS 6866064 6866282 6866064 ID=Msa0794970-mRNA-1:cds;Parent=Msa0794970-mRNA-1
chr5_3 CDS 6866449 6866638 6866449 ID=Msa0794970-mRNA-1:cds;Parent=Msa0794970-mRNA-1
chr5_3 CDS 6866751 6866946 6866751 ID=Msa0794970-mRNA-1:cds;Parent=Msa0794970-mRNA-1
chr5_3 CDS 6867159 6867273 6867159 ID=Msa0794970-mRNA-1:cds;Parent=Msa0794970-mRNA-1
chr5_3 three_prime_UTR 6867274 6867636 6867274 ID=Msa0794970-mRNA-1:three_prime_utr;Parent=Msa0794970-mRNA-1
Gene Sequence

>Msa0794970

ATGTCTTCTTCCAAAGATGCAGACCCAACCCTAGGTTATCTCACTCGAAAAGACACCGAAGTCAAGCTTCCACGTCCAACTAGGGTTAAGAACAAAACCCCCGCTCCAATTCAAATCACAGCGGAGCAAATTCTTCGTGAAGCTAGGGAGCGTCAAGAAGCTGAGATCCGTCCTCCGAAACAGAAAATCACCGATTCAACCGAACTCGGCGAGTATCGTCTCCGGAAAAGAAAGGAATTCGAGGATTTAATCCGGAGAGTTCGGTGGAATGTCAGTGTTTGGATTAAGTATGCACAGTGGGAAGAGTCGCAGAAGGATTTTACACGTGCGCGTTCGGTTTGGGAACGAGCATTGGAAGTTGATTATAAGAATCATACTCTGTGGTTGAAGTATGCTGAAGTTGAGATGAAGAATAAGTTTATTAATCATGCGAGGAATGTTTGGGATCGTGCGGTTACTCTCTTGCCGCGGGTGGATCAGTTGTGGTATAAGTATATTCATATGGAGGAGATGCTTGGCAATGTCGCTGGGGCGAGGCAGGTTTTCGAGAGATGGATGAAATGGATGCCGGATCAGCAAGGATGGTTATCTTATATAAAATTTGAGCTGAGATATAACGAGATTGAACGAGCGAGAGGGATTTTCGAGAGATTTGTTTTGTGTCATCCTAGGGTTGGTGCTTGGATACGCTATGCGAAGTTTGAGATGAAGAATGGCGAGGTTCCTAAGGCGAGGAATGTTTATGAGAGAGCGGTGGAGAAGCTAGCGGATGATGAGGAAGCAGAGCTGCTTTTTGTGGCGTTTGCGGAGTTTGAGGAAAGGTGTAAGGAGGCAGAGCGTGCTAGGTGTATTTATAAATTTGCACTTGATCATATTCCGAAGGGGAGGGCTGAGGATTTGTACCGGAAGTTTGTGGCATTTGAGAAACAGTATGGTGATAGGGAAGGGATTGAGGATGCTATTGTTGGGAAGAGAAGGTTTCAGTATGAAGATGAAGTGAGGAAAAATCCGTTGAATTATGATTCGTGGTTTGATTATATAAGATTGGAAGAGAGTGTCGGGAATAAGGAAAGAACTAGGGAGGTTTATGAGAGAGCTATAGCTAATGTTCCTCCAGCTGAGGAGAAGCGATACTGGCAGCGCTATATTTATTTGTGGATTAATTATGCACTCTATGAAGAACTCGATGCTGGAGACATGGAGCGAACAAGAGATGTGTACAAGGAGTGTCTCAACCAGATACCTCACCAGAAGTTCTCATTTGCAAAGATATGGCTTCTAGCAGCCCAGTTTGAAATACGTCAGCTGAATCTCACGGGTGCTCGTCAAATATTAGGGAATGCTATTGGAAAGGCTCCTAAAGATAAGATATTTAAGAAGTATATAGAGATAGAACTGCAGCTTGGTAATATAGATCGATGCAGAAAACTATATGAAAAGTATTTGGAGTGGTCACCTGAAAATTGCTATGCATGGAGCAAGTATGCAGAACTAGAGAGATCTTTAGCTGAGACTGAACGAGCTAGAGCAATATTTGAGCTTGCAATTGCCCAACCAGCATTGGACATGCCTGAGTTGTTGTGGAAGGCATACATTGATTTTGAAACTGCCGAGTGTGAATTTGATAGAGCAAGAGCGCTTTATGAAAGGCTTCTTGATCGAACAAAGCACTTGAAGGTATGGCAGAGCTATGCAGAGTTTGAAGCAACAGCTATAGATGAGAGTTTAGAATTATCGGAACAAGAACAAAAGGAGCAGTGCCTTCAGCGTGCGAGAAAGGTGTTTGAGGATGCTCTAAACCACTTCAGATCATCAGCTCCAGATTTAAAAGAAGAAAGGGCAATGCTATTAGAGAAATGGCTCAACTTGGAGGCTTCATCTGGGGAGCTAGGTGATGTCAGCTTAGTCCAGTCTAAGCTGCCCAAGAAGCTCAAGAAGAGAAGACAAGTTTCTACTGAAGATGGTTCTTCTAGAATGGAAGAATTTATCGACTATCTATTCCCCGAGGAAACACATTCAACCAATCTCAAGATCATGGAAGCCGCTTACAAATGGAAGAAGCAAAAATTGTCTAATGCTGATGAATAA
Protein sequence

>Msa0794970

MSSSKDADPTLGYLTRKDTEVKLPRPTRVKNKTPAPIQITAEQILREARERQEAEIRPPKQKITDSTELGEYRLRKRKEFEDLIRRVRWNVSVWIKYAQWEESQKDFTRARSVWERALEVDYKNHTLWLKYAEVEMKNKFINHARNVWDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQVFERWMKWMPDQQGWLSYIKFELRYNEIERARGIFERFVLCHPRVGAWIRYAKFEMKNGEVPKARNVYERAVEKLADDEEAELLFVAFAEFEERCKEAERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVGKRRFQYEDEVRKNPLNYDSWFDYIRLEESVGNKERTREVYERAIANVPPAEEKRYWQRYIYLWINYALYEELDAGDMERTRDVYKECLNQIPHQKFSFAKIWLLAAQFEIRQLNLTGARQILGNAIGKAPKDKIFKKYIEIELQLGNIDRCRKLYEKYLEWSPENCYAWSKYAELERSLAETERARAIFELAIAQPALDMPELLWKAYIDFETAECEFDRARALYERLLDRTKHLKVWQSYAEFEATAIDESLELSEQEQKEQCLQRARKVFEDALNHFRSSAPDLKEERAMLLEKWLNLEASSGELGDVSLVQSKLPKKLKKRRQVSTEDGSSRMEEFIDYLFPEETHSTNLKIMEAAYKWKKQKLSNADE*